ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd11f14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009431.1| Triticum aestivum clone wlmk1.pk0035.e4:fis, full insert mRNA sequence Length = 1652 Score = 1235 bits (623), Expect = 0.0 Identities = 641/647 (99%) Strand = Plus / Plus Query: 5 ggaagaaagtccgtgctatttcagagaaagaaattgcacccattatgaccgaatactggg 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggaagaaagtccgtgctatttcagagaaagaaattgcacccattatgaccgaatactggg 360 Query: 65 agaaggcagaattcccatttcatgccattccgaaacttgcaactcttggcttagctggaa 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaaggcagaattcccatttcatgccattccgaaacttgcaactcttggcttagctggaa 420 Query: 125 gtacaacgaagggatatgggtgcccaggactctcgcttacagcgagtgccgtttctatag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gtacaacgaagggatatgggtgcccaggactctcgcttacagcgagtgccgtttctatag 480 Query: 185 cagaagttgcacgggttgatgcaagctgctccacatttattttagtgcactcctctttgg 244 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 481 cagaagttgcacgggttgatgcaagctgctccacatttattctagtgcactcctctttgg 540 Query: 245 caatgtccacaattgctctttgtggatcagaggctcaaaagcagaagtacctaccatcgt 304 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 caatgtccacaattgccctttgtggatcagaggctcaaaagcagaagtacctaccatcgt 600 Query: 305 tagctcagtttaaaactgttggttgctgggctttaacagagccagattatggaagtgatg 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 tagctcagtttaaaactgttggttgctgggctttaacagagccagattatggaagtgatg 660 Query: 365 caagctccttgaaaacttcagcaaccaaggtacctggcggttggcaattagatggccaaa 424 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 661 caagctccttgaaaacttcagcaatcaaggtacctggcggttggcaattagatggccaaa 720 Query: 425 agcgctggataggtaacagcacgtttgcagatgtgcttgtaattttagctaggaatgcag 484 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 721 agcgctggataggtaacagcacgtttgcagatgtgcttgtaattttggctaggaatgcag 780 Query: 485 acacaaagcaactaaatggattcattgtgaagaagggagcgcctggtttgagagccacaa 544 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 acacaaagcaactaaacggattcattgtgaagaagggagcgcctggtttgagagccacaa 840 Query: 545 aaattcaaaacaaaattggacttagaatggttcagaatggcgatatccttctgaataaag 604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 aaattcaaaacaaaattggacttagaatggttcagaatggcgatatccttctgaataaag 900 Query: 605 tatttgtcccagaagaagacagattaacaggcatcaactcatttcag 651 ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 901 tatttgtcccagaagaagacagattaacaggcatcaattcatttcag 947
>ref|XM_475647.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1293 Score = 622 bits (314), Expect = e-175 Identities = 563/646 (87%) Strand = Plus / Plus Query: 5 ggaagaaagtccgtgctatttcagagaaagaaattgcacccattatgaccgaatactggg 64 ||||||||||||||| |||| |||| ||||||||||||||||||||| || ||||||| Sbjct: 164 ggaagaaagtccgtggtattatggagagagaaattgcacccattatgacagagtactggg 223 Query: 65 agaaggcagaattcccatttcatgccattccgaaacttgcaactcttggcttagctggaa 124 |||| |||||||| || || ||||||||||| |||||||||||||||||||| || ||| Sbjct: 224 agaaagcagaatttcccttccatgccattcccaaacttgcaactcttggcttggcaggag 283 Query: 125 gtacaacgaagggatatgggtgcccaggactctcgcttacagcgagtgccgtttctatag 184 | ||||| ||||||||||| |||||||||||||| |||||||| ||||| ||||| | | Sbjct: 284 ggacaacaaagggatatggttgcccaggactctcacttacagctagtgctatttctgttg 343 Query: 185 cagaagttgcacgggttgatgcaagctgctccacatttattttagtgcactcctctttgg 244 |||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||| Sbjct: 344 cagaagttgcacgggtggatgccagctgctccacatttattttagtacattcctctttgg 403 Query: 245 caatgtccacaattgctctttgtggatcagaggctcaaaagcagaagtacctaccatcgt 304 ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 404 caatgagcacaattgcactttgtggatcagaggctcaaaagcagaagtacttaccatcat 463 Query: 305 tagctcagtttaaaactgttggttgctgggctttaacagagccagattatggaagtgatg 364 || | ||||||| ||| ||||||||||||| || ||||||||||||||||||||||||| Sbjct: 464 taacgcagtttagaacaattggttgctgggcattgacagagccagattatggaagtgatg 523 Query: 365 caagctccttgaaaacttcagcaaccaaggtacctggcggttggcaattagatggccaaa 424 |||| || || | ||| |||| |||||||| |||||||||||||| || |||||||||| Sbjct: 524 caagttcattaaggactgcagcgaccaaggtgcctggcggttggcatttggatggccaaa 583 Query: 425 agcgctggataggtaacagcacgtttgcagatgtgcttgtaattttagctaggaatgcag 484 |||| |||||||| ||| |||| |||||||||||||| | || |||||||| ||| ||| Sbjct: 584 agcgttggataggcaacggcacttttgcagatgtgctcatcatcttagctagaaattcag 643 Query: 485 acacaaagcaactaaatggattcattgtgaagaagggagcgcctggtttgagagccacaa 544 | ||||| |||||||||||||| ||||| ||||| ||||| |||||||||| | |||| Sbjct: 644 atacaaatcaactaaatggatttattgtcaagaaaggagctcctggtttgaaatgtacaa 703 Query: 545 aaattcaaaacaaaattggacttagaatggttcagaatggcgatatccttctgaataaag 604 ||||| |||| ||||||||||| |||||||||||||||| ||| || |||||||||||| Sbjct: 704 aaattgaaaataaaattggactcagaatggttcagaatgccgacattgttctgaataaag 763 Query: 605 tatttgtcccagaagaagacagattaacaggcatcaactcatttca 650 |||||||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 764 tatttgtccctgacgaagatagattaactggaatcaattcatttca 809
>dbj|AK071561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099O18, full insert sequence Length = 1568 Score = 622 bits (314), Expect = e-175 Identities = 563/646 (87%) Strand = Plus / Plus Query: 5 ggaagaaagtccgtgctatttcagagaaagaaattgcacccattatgaccgaatactggg 64 ||||||||||||||| |||| |||| ||||||||||||||||||||| || ||||||| Sbjct: 286 ggaagaaagtccgtggtattatggagagagaaattgcacccattatgacagagtactggg 345 Query: 65 agaaggcagaattcccatttcatgccattccgaaacttgcaactcttggcttagctggaa 124 |||| |||||||| || || ||||||||||| |||||||||||||||||||| || ||| Sbjct: 346 agaaagcagaatttcccttccatgccattcccaaacttgcaactcttggcttggcaggag 405 Query: 125 gtacaacgaagggatatgggtgcccaggactctcgcttacagcgagtgccgtttctatag 184 | ||||| ||||||||||| |||||||||||||| |||||||| ||||| ||||| | | Sbjct: 406 ggacaacaaagggatatggttgcccaggactctcacttacagctagtgctatttctgttg 465 Query: 185 cagaagttgcacgggttgatgcaagctgctccacatttattttagtgcactcctctttgg 244 |||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||| Sbjct: 466 cagaagttgcacgggtggatgccagctgctccacatttattttagtacattcctctttgg 525 Query: 245 caatgtccacaattgctctttgtggatcagaggctcaaaagcagaagtacctaccatcgt 304 ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 526 caatgagcacaattgcactttgtggatcagaggctcaaaagcagaagtacttaccatcat 585 Query: 305 tagctcagtttaaaactgttggttgctgggctttaacagagccagattatggaagtgatg 364 || | ||||||| ||| ||||||||||||| || ||||||||||||||||||||||||| Sbjct: 586 taacgcagtttagaacaattggttgctgggcattgacagagccagattatggaagtgatg 645 Query: 365 caagctccttgaaaacttcagcaaccaaggtacctggcggttggcaattagatggccaaa 424 |||| || || | ||| |||| |||||||| |||||||||||||| || |||||||||| Sbjct: 646 caagttcattaaggactgcagcgaccaaggtgcctggcggttggcatttggatggccaaa 705 Query: 425 agcgctggataggtaacagcacgtttgcagatgtgcttgtaattttagctaggaatgcag 484 |||| |||||||| ||| |||| |||||||||||||| | || |||||||| ||| ||| Sbjct: 706 agcgttggataggcaacggcacttttgcagatgtgctcatcatcttagctagaaattcag 765 Query: 485 acacaaagcaactaaatggattcattgtgaagaagggagcgcctggtttgagagccacaa 544 | ||||| |||||||||||||| ||||| ||||| ||||| |||||||||| | |||| Sbjct: 766 atacaaatcaactaaatggatttattgtcaagaaaggagctcctggtttgaaatgtacaa 825 Query: 545 aaattcaaaacaaaattggacttagaatggttcagaatggcgatatccttctgaataaag 604 ||||| |||| ||||||||||| |||||||||||||||| ||| || |||||||||||| Sbjct: 826 aaattgaaaataaaattggactcagaatggttcagaatgccgacattgttctgaataaag 885 Query: 605 tatttgtcccagaagaagacagattaacaggcatcaactcatttca 650 |||||||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 886 tatttgtccctgacgaagatagattaactggaatcaattcatttca 931
>gb|AY107473.1| Zea mays PCO132850 mRNA sequence Length = 1709 Score = 607 bits (306), Expect = e-170 Identities = 540/618 (87%) Strand = Plus / Plus Query: 34 gaaattgcacccattatgaccgaatactgggagaaggcagaattcccatttcatgccatt 93 ||||| || ||||||||||| || |||||||||||||| ||||||||||| ||||||||| Sbjct: 352 gaaatcgcgcccattatgactgagtactgggagaaggctgaattcccattccatgccatt 411 Query: 94 ccgaaacttgcaactcttggcttagctggaagtacaacgaagggatatgggtgcccagga 153 || | ||||| | |||||| |||||||| |||||| ||||| ||||||||||| ||| Sbjct: 412 cccagccttgccagtcttggtttagctggtggtacaataaaggggtatgggtgccctgga 471 Query: 154 ctctcgcttacagcgagtgccgtttctatagcagaagttgcacgggttgatgcaagctgc 213 |||||||||||||| ||||| |||| |||||||| ||||||||||| ||||| |||||| Sbjct: 472 ctctcgcttacagctagtgctatttcgatagcagaggttgcacgggtcgatgcgagctgc 531 Query: 214 tccacatttattttagtgcactcctctttggcaatgtccacaattgctctttgtggatca 273 |||||||||||| ||||||||||||| ||||| |||||||| ||||| ||||||||||| Sbjct: 532 tccacatttattctagtgcactcctcgttggctatgtccactattgccctttgtggatct 591 Query: 274 gaggctcaaaagcagaagtacctaccatcgttagctcagtttaaaactgttggttgctgg 333 ||||||||||||||||| ||| ||||||| | | ||||| |||||| ||||||||||| Sbjct: 592 gaggctcaaaagcagaaatacttaccatctcttacccagttcaaaactattggttgctgg 651 Query: 334 gctttaacagagccagattatggaagtgatgcaagctccttgaaaacttcagcaaccaag 393 || || ||||||||||||||||||||||||||||||||| | | ||| ||||||||||| Sbjct: 652 gcattgacagagccagattatggaagtgatgcaagctccctaaggactgcagcaaccaag 711 Query: 394 gtacctggcggttggcaattagatggccaaaagcgctggataggtaacagcacgtttgca 453 |||||||| |||||||| |||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 712 gtacctggtggttggcatttagatggacaaaaacgctggataggtaacagcacttttgca 771 Query: 454 gatgtgcttgtaattttagctaggaatgcagacacaaagcaactaaatggattcattgtg 513 ||||| || | ||||| |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 772 gatgtcctcatcattttggctaggaatgcagatacaaaccaactaaatggatttattgta 831 Query: 514 aagaagggagcgcctggtttgagagccacaaaaattcaaaacaaaattggacttagaatg 573 ||||| ||||| |||||| | | ||||||||||||| |||| ||||||||||| |||||| Sbjct: 832 aagaaaggagctcctggtctaaaagccacaaaaattgaaaataaaattggactcagaatg 891 Query: 574 gttcagaatggcgatatccttctgaataaagtatttgtcccagaagaagacagattaaca 633 ||||| ||||| || || |||| ||||||||||||||||| || ||||||||||||||| Sbjct: 892 gttcaaaatggagacataattctaaataaagtatttgtccctgaggaagacagattaaca 951 Query: 634 ggcatcaactcatttcag 651 |||||||| ||||||||| Sbjct: 952 ggcatcaattcatttcag 969
>ref|XM_550215.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1979 Score = 396 bits (200), Expect = e-107 Identities = 497/596 (83%) Strand = Plus / Plus Query: 28 gagaaagaaattgcacccattatgaccgaatactgggagaaggcagaattcccatttcat 87 |||||||||||||||||||||||| | ||||||||||| ||||| |||||||||||| Sbjct: 322 gagaaagaaattgcacccattatggcaacgtactgggagaaagcagagttcccatttcat 381 Query: 88 gccattccgaaacttgcaactcttggcttagctggaagtacaacgaagggatatgggtgc 147 |||||||| |||||| ||| || || |||||||| | |||| ||||||||||||||| Sbjct: 382 gccattcctaaactttcaagcctcggtgtagctggaggcacaataaagggatatgggtgc 441 Query: 148 ccaggactctcgcttacagcgagtgccgtttctatagcagaagttgcacgggttgatgca 207 |||||||| || | ||||| ||||| || |||| |||||| |||||||||| |||||| Sbjct: 442 ccaggactttcaataacagcaagtgctattactatggcagaaattgcacgggtagatgca 501 Query: 208 agctgctccacatttattttagtgcactcctctttggcaatgtccacaattgctctttgt 267 ||||||||||| || ||| |||| |||||||| | |||||| |||||| ||||||||| Sbjct: 502 agctgctccacgttcattctagtacactcctcccttgcaatggtcacaatagctctttgt 561 Query: 268 ggatcagaggctcaaaagcagaagtacctaccatcgttagctcagtttaaaactgttggt 327 ||||| |||| ||| |||||||||||| | ||||| | ||||| ||| |||||||| Sbjct: 562 ggatctgaggttcagaagcagaagtacttgccatcccttgctcaacttactgctgttggt 621 Query: 328 tgctgggctttaacagagccagattatggaagtgatgcaagctccttgaaaacttcagca 387 |||||||| || ||||| ||| || ||||||| ||||||||||| |||| |||| ||||| Sbjct: 622 tgctgggcattgacagaaccaaatcatggaagcgatgcaagctctttgataactacagca 681 Query: 388 accaaggtacctggcggttggcaattagatggccaaaagcgctggataggtaacagcacg 447 |||||||||||||| || ||||| ||||||| ||||| |||||||| |||||||| || Sbjct: 682 accaaggtacctggtgggtggcacatagatggacaaaaacgctggattggtaacagtact 741 Query: 448 tttgcagatgtgcttgtaattttagctaggaatgcagacacaaagcaactaaatggattc 507 ||||| |||||||| || | |||||||||||||| | ||||| |||||||||||||| Sbjct: 742 tttgctgatgtgctcgtggtattagctaggaatgccaatacaaaacaactaaatggattt 801 Query: 508 attgtgaagaagggagcgcctggtttgagagccacaaaaattcaaaacaaaattggactt 567 ||||||| |||||| || ||||| |||| ||| ||||| ||| | ||||||||||| || Sbjct: 802 attgtgaggaagggtgctcctggcttgaaagctacaaagattgagaacaaaattggtctc 861 Query: 568 agaatggttcagaatggcgatatccttctgaataaagtatttgtcccagaagaaga 623 |||||||||||||| || ||||| || | ||||||||||||||||| || ||||| Sbjct: 862 agaatggttcagaacggtgatatagtttttaataaagtatttgtccctgaggaaga 917
>dbj|AK100550.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103E08, full insert sequence Length = 1979 Score = 396 bits (200), Expect = e-107 Identities = 497/596 (83%) Strand = Plus / Plus Query: 28 gagaaagaaattgcacccattatgaccgaatactgggagaaggcagaattcccatttcat 87 |||||||||||||||||||||||| | ||||||||||| ||||| |||||||||||| Sbjct: 322 gagaaagaaattgcacccattatggcaacgtactgggagaaagcagagttcccatttcat 381 Query: 88 gccattccgaaacttgcaactcttggcttagctggaagtacaacgaagggatatgggtgc 147 |||||||| |||||| ||| || || |||||||| | |||| ||||||||||||||| Sbjct: 382 gccattcctaaactttcaagcctcggtgtagctggaggcacaataaagggatatgggtgc 441 Query: 148 ccaggactctcgcttacagcgagtgccgtttctatagcagaagttgcacgggttgatgca 207 |||||||| || | ||||| ||||| || |||| |||||| |||||||||| |||||| Sbjct: 442 ccaggactttcaataacagcaagtgctattactatggcagaaattgcacgggtagatgca 501 Query: 208 agctgctccacatttattttagtgcactcctctttggcaatgtccacaattgctctttgt 267 ||||||||||| || ||| |||| |||||||| | |||||| |||||| ||||||||| Sbjct: 502 agctgctccacgttcattctagtacactcctcccttgcaatggtcacaatagctctttgt 561 Query: 268 ggatcagaggctcaaaagcagaagtacctaccatcgttagctcagtttaaaactgttggt 327 ||||| |||| ||| |||||||||||| | ||||| | ||||| ||| |||||||| Sbjct: 562 ggatctgaggttcagaagcagaagtacttgccatcccttgctcaacttactgctgttggt 621 Query: 328 tgctgggctttaacagagccagattatggaagtgatgcaagctccttgaaaacttcagca 387 |||||||| || ||||| ||| || ||||||| ||||||||||| |||| |||| ||||| Sbjct: 622 tgctgggcattgacagaaccaaatcatggaagcgatgcaagctctttgataactacagca 681 Query: 388 accaaggtacctggcggttggcaattagatggccaaaagcgctggataggtaacagcacg 447 |||||||||||||| || ||||| ||||||| ||||| |||||||| |||||||| || Sbjct: 682 accaaggtacctggtgggtggcacatagatggacaaaaacgctggattggtaacagtact 741 Query: 448 tttgcagatgtgcttgtaattttagctaggaatgcagacacaaagcaactaaatggattc 507 ||||| |||||||| || | |||||||||||||| | ||||| |||||||||||||| Sbjct: 742 tttgctgatgtgctcgtggtattagctaggaatgccaatacaaaacaactaaatggattt 801 Query: 508 attgtgaagaagggagcgcctggtttgagagccacaaaaattcaaaacaaaattggactt 567 ||||||| |||||| || ||||| |||| ||| ||||| ||| | ||||||||||| || Sbjct: 802 attgtgaggaagggtgctcctggcttgaaagctacaaagattgagaacaaaattggtctc 861 Query: 568 agaatggttcagaatggcgatatccttctgaataaagtatttgtcccagaagaaga 623 |||||||||||||| || ||||| || | ||||||||||||||||| || ||||| Sbjct: 862 agaatggttcagaacggtgatatagtttttaataaagtatttgtccctgaggaaga 917
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099P06, complete sequence Length = 135117 Score = 147 bits (74), Expect = 5e-32 Identities = 113/126 (89%) Strand = Plus / Minus Query: 134 agggatatgggtgcccaggactctcgcttacagcgagtgccgtttctatagcagaagttg 193 |||||||||| |||||||||||||| |||||||| ||||| ||||| | |||||||||| Sbjct: 95149 agggatatggttgcccaggactctcacttacagctagtgctatttctgttgcagaagttg 95090 Query: 194 cacgggttgatgcaagctgctccacatttattttagtgcactcctctttggcaatgtcca 253 ||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| || Sbjct: 95089 cacgggtggatgccagctgctccacatttattttagtacattcctctttggcaatgagca 95030 Query: 254 caattg 259 |||||| Sbjct: 95029 caattg 95024 Score = 127 bits (64), Expect = 5e-26 Identities = 127/148 (85%) Strand = Plus / Minus Query: 503 gattcattgtgaagaagggagcgcctggtttgagagccacaaaaattcaaaacaaaattg 562 |||| ||||| ||||| ||||| |||||||||| | ||||||||| |||| ||||||| Sbjct: 94326 gatttattgtcaagaaaggagctcctggtttgaaatgtacaaaaattgaaaataaaattg 94267 Query: 563 gacttagaatggttcagaatggcgatatccttctgaataaagtatttgtcccagaagaag 622 |||| |||||||||||||||| ||| || |||||||||||||||||||||| || |||| Sbjct: 94266 gactcagaatggttcagaatgccgacattgttctgaataaagtatttgtccctgacgaag 94207 Query: 623 acagattaacaggcatcaactcatttca 650 | |||||||| || ||||| |||||||| Sbjct: 94206 atagattaactggaatcaattcatttca 94179 Score = 103 bits (52), Expect = 7e-19 Identities = 97/112 (86%) Strand = Plus / Minus Query: 392 aggtacctggcggttggcaattagatggccaaaagcgctggataggtaacagcacgtttg 451 |||| |||||||||||||| || |||||||||||||| |||||||| ||| |||| |||| Sbjct: 94562 aggtgcctggcggttggcatttggatggccaaaagcgttggataggcaacggcacttttg 94503 Query: 452 cagatgtgcttgtaattttagctaggaatgcagacacaaagcaactaaatgg 503 |||||||||| | || |||||||| ||| |||| ||||| ||||||||||| Sbjct: 94502 cagatgtgctcatcatcttagctagaaattcagatacaaatcaactaaatgg 94451 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 262 ctttgtggatcagaggctcaaaagcagaagtacctaccatcgttagctcagtttaaaact 321 ||||||||||||||||||||||||||||||||| ||||||| ||| | ||||||| ||| Sbjct: 94910 ctttgtggatcagaggctcaaaagcagaagtacttaccatcattaacgcagtttagaaca 94851 Query: 322 gttggttgctggg 334 |||||||||||| Sbjct: 94850 attggttgctggg 94838 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 58 tactgggagaaggcagaattcccatttcatgccattccgaaacttgcaactcttggctta 117 ||||||||||| |||||||| || || ||||||||||| |||||||||||||||||||| Sbjct: 95346 tactgggagaaagcagaatttcccttccatgccattcccaaacttgcaactcttggcttg 95287 Query: 118 gctggaagtacaacgaagggatat 141 || ||| | ||||| |||| |||| Sbjct: 95286 gcaggagggacaacaaaggtatat 95263 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 5 ggaagaaagtccgtgctatttcagagaaagaaattgcacccattatgac 53 ||||||||||||||| |||| |||| ||||||||||||||||||||| Sbjct: 95626 ggaagaaagtccgtggtattatggagagagaaattgcacccattatgac 95578 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 340 acagagccagattatggaagtgatgcaag 368 ||||||||||||||||||||||||||||| Sbjct: 94721 acagagccagattatggaagtgatgcaag 94693
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 147 bits (74), Expect = 5e-32 Identities = 113/126 (89%) Strand = Plus / Minus Query: 134 agggatatgggtgcccaggactctcgcttacagcgagtgccgtttctatagcagaagttg 193 |||||||||| |||||||||||||| |||||||| ||||| ||||| | |||||||||| Sbjct: 3672802 agggatatggttgcccaggactctcacttacagctagtgctatttctgttgcagaagttg 3672743 Query: 194 cacgggttgatgcaagctgctccacatttattttagtgcactcctctttggcaatgtcca 253 ||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| || Sbjct: 3672742 cacgggtggatgccagctgctccacatttattttagtacattcctctttggcaatgagca 3672683 Query: 254 caattg 259 |||||| Sbjct: 3672682 caattg 3672677 Score = 127 bits (64), Expect = 5e-26 Identities = 127/148 (85%) Strand = Plus / Minus Query: 503 gattcattgtgaagaagggagcgcctggtttgagagccacaaaaattcaaaacaaaattg 562 |||| ||||| ||||| ||||| |||||||||| | ||||||||| |||| ||||||| Sbjct: 3671979 gatttattgtcaagaaaggagctcctggtttgaaatgtacaaaaattgaaaataaaattg 3671920 Query: 563 gacttagaatggttcagaatggcgatatccttctgaataaagtatttgtcccagaagaag 622 |||| |||||||||||||||| ||| || |||||||||||||||||||||| || |||| Sbjct: 3671919 gactcagaatggttcagaatgccgacattgttctgaataaagtatttgtccctgacgaag 3671860 Query: 623 acagattaacaggcatcaactcatttca 650 | |||||||| || ||||| |||||||| Sbjct: 3671859 atagattaactggaatcaattcatttca 3671832 Score = 103 bits (52), Expect = 7e-19 Identities = 97/112 (86%) Strand = Plus / Minus Query: 392 aggtacctggcggttggcaattagatggccaaaagcgctggataggtaacagcacgtttg 451 |||| |||||||||||||| || |||||||||||||| |||||||| ||| |||| |||| Sbjct: 3672215 aggtgcctggcggttggcatttggatggccaaaagcgttggataggcaacggcacttttg 3672156 Query: 452 cagatgtgcttgtaattttagctaggaatgcagacacaaagcaactaaatgg 503 |||||||||| | || |||||||| ||| |||| ||||| ||||||||||| Sbjct: 3672155 cagatgtgctcatcatcttagctagaaattcagatacaaatcaactaaatgg 3672104 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 262 ctttgtggatcagaggctcaaaagcagaagtacctaccatcgttagctcagtttaaaact 321 ||||||||||||||||||||||||||||||||| ||||||| ||| | ||||||| ||| Sbjct: 3672563 ctttgtggatcagaggctcaaaagcagaagtacttaccatcattaacgcagtttagaaca 3672504 Query: 322 gttggttgctggg 334 |||||||||||| Sbjct: 3672503 attggttgctggg 3672491 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 58 tactgggagaaggcagaattcccatttcatgccattccgaaacttgcaactcttggctta 117 ||||||||||| |||||||| || || ||||||||||| |||||||||||||||||||| Sbjct: 3672999 tactgggagaaagcagaatttcccttccatgccattcccaaacttgcaactcttggcttg 3672940 Query: 118 gctggaagtacaacgaagggatat 141 || ||| | ||||| |||| |||| Sbjct: 3672939 gcaggagggacaacaaaggtatat 3672916 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 5 ggaagaaagtccgtgctatttcagagaaagaaattgcacccattatgac 53 ||||||||||||||| |||| |||| ||||||||||||||||||||| Sbjct: 3673279 ggaagaaagtccgtggtattatggagagagaaattgcacccattatgac 3673231 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 340 acagagccagattatggaagtgatgcaag 368 ||||||||||||||||||||||||||||| Sbjct: 3672374 acagagccagattatggaagtgatgcaag 3672346
>gb|AY110040.1| Zea mays CL716_1 mRNA sequence Length = 1802 Score = 139 bits (70), Expect = 1e-29 Identities = 266/333 (79%) Strand = Plus / Plus Query: 319 actgttggttgctgggctttaacagagccagattatggaagtgatgcaagctccttgaaa 378 |||||||| || |||||||| ||||||||| | |||||||||||||| |||||||||| | Sbjct: 602 actgttggctgttgggctttgacagagccaaactatggaagtgatgcgagctccttgaga 661 Query: 379 acttcagcaaccaaggtacctggcggttggcaattagatggccaaaagcgctggataggt 438 ||| ||| ||||||| |||||| || ||||| ||||||| | |||||||| ||| Sbjct: 662 actatagcgaccaaggcacctggtgggtggcacatagatggtcnnnnncgctggatcggt 721 Query: 439 aacagcacgtttgcagatgtgcttgtaattttagctaggaatgcagacacaaagcaacta 498 ||||| || || || |||||||| || | ||||| ||||||||||||||| | || ||| Sbjct: 722 aacagtactttcgccgatgtgctcgtcgtgttagccaggaatgcagacacacaacagcta 781 Query: 499 aatggattcattgtgaagaagggagcgcctggtttgagagccacaaaaattcaaaacaaa 558 ||||| ||||||||| ||| ||||| ||||| ||| ||| ||||| || | |||||| Sbjct: 782 aatgggttcattgtgcggaaaggagctcctggcctgaaagctacaaagatcgagaacaaa 841 Query: 559 attggacttagaatggttcagaatggcgatatccttctgaataaagtatttgtcccagaa 618 ||||| || || ||||||||||| || || || || |||| || || || ||||| || Sbjct: 842 attggcctcaggatggttcagaacggtgacatagttttgaacaaggtgttcgtccctgac 901 Query: 619 gaagacagattaacaggcatcaactcatttcag 651 |||||| | || ||||||||||||| |||||| Sbjct: 902 gaagaccggttgccaggcatcaactcgtttcag 934 Score = 133 bits (67), Expect = 8e-28 Identities = 172/207 (83%) Strand = Plus / Plus Query: 34 gaaattgcacccattatgaccgaatactgggagaaggcagaattcccatttcatgccatt 93 |||||||| ||||||||| | | |||||||| |||||||| || |||||| |||||||| Sbjct: 317 gaaattgctcccattatgtcagcgtactgggaaaaggcagagtttccatttaatgccatt 376 Query: 94 ccgaaacttgcaactcttggcttagctggaagtacaacgaagggatatgggtgcccagga 153 || |||||||||| ||||| | ||||| |||||| ||||| ||||||||||||||| Sbjct: 377 cctaaacttgcaagccttggtgttgctggtggtacaataaagggttatgggtgcccagga 436 Query: 154 ctctcgcttacagcgagtgccgtttctatagcagaagttgcacgggttgatgcaagctgc 213 || || |||| || ||||| ||| |||| ||||| |||||||||| ||||||||||| Sbjct: 437 ctttccattactgccagtgctgttactatgtcagaaattgcacgggtagatgcaagctgt 496 Query: 214 tccacatttattttagtgcactcctct 240 ||||||||||| | |||||||||||| Sbjct: 497 tccacatttatactggtgcactcctct 523
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 91.7 bits (46), Expect = 3e-15 Identities = 91/106 (85%) Strand = Plus / Minus Query: 134 agggatatgggtgcccaggactctcgcttacagcgagtgccgtttctatagcagaagttg 193 |||||||||||||||||||||| || | ||||| ||||| || |||| |||||| ||| Sbjct: 3109873 agggatatgggtgcccaggactttcaataacagcaagtgctattactatggcagaaattg 3109814 Query: 194 cacgggttgatgcaagctgctccacatttattttagtgcactcctc 239 ||||||| ||||||||||||||||| || ||| |||| |||||||| Sbjct: 3109813 cacgggtagatgcaagctgctccacgttcattctagtacactcctc 3109768 Score = 81.8 bits (41), Expect = 3e-12 Identities = 101/121 (83%) Strand = Plus / Minus Query: 503 gattcattgtgaagaagggagcgcctggtttgagagccacaaaaattcaaaacaaaattg 562 |||| ||||||| |||||| || ||||| |||| ||| ||||| ||| | |||||||||| Sbjct: 3108674 gatttattgtgaggaagggtgctcctggcttgaaagctacaaagattgagaacaaaattg 3108615 Query: 563 gacttagaatggttcagaatggcgatatccttctgaataaagtatttgtcccagaagaag 622 | || |||||||||||||| || ||||| || | ||||||||||||||||| || |||| Sbjct: 3108614 gtctcagaatggttcagaacggtgatatagtttttaataaagtatttgtccctgaggaag 3108555 Query: 623 a 623 | Sbjct: 3108554 a 3108554 Score = 79.8 bits (40), Expect = 1e-11 Identities = 94/112 (83%) Strand = Plus / Minus Query: 392 aggtacctggcggttggcaattagatggccaaaagcgctggataggtaacagcacgtttg 451 |||||||||| || ||||| ||||||| ||||| |||||||| |||||||| || |||| Sbjct: 3108877 aggtacctggtgggtggcacatagatggacaaaaacgctggattggtaacagtacttttg 3108818 Query: 452 cagatgtgcttgtaattttagctaggaatgcagacacaaagcaactaaatgg 503 | |||||||| || | |||||||||||||| | ||||| ||||||||||| Sbjct: 3108817 ctgatgtgctcgtggtattagctaggaatgccaatacaaaacaactaaatgg 3108766 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 58 tactgggagaaggcagaattcccatttcatgccattccgaaactt 102 ||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 3110872 tactgggagaaagcagagttcccatttcatgccattcctaaactt 3110828 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 340 acagagccagattatggaagtgatgcaagctccttgaaaacttcagcaaccaaggt 395 ||||| ||| || ||||||| ||||||||||| |||| |||| ||||||||||||| Sbjct: 3109437 acagaaccaaatcatggaagcgatgcaagctctttgataactacagcaaccaaggt 3109382 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 28 gagaaagaaattgcacccattatg 51 |||||||||||||||||||||||| Sbjct: 3111198 gagaaagaaattgcacccattatg 3111175 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Minus Query: 259 gctctttgtggatcagaggctcaaaagcagaagtacctaccatcgttagctcagtttaaa 318 |||||||||||||| |||| ||| |||||||||||| | ||||| | ||||| ||| Sbjct: 3109619 gctctttgtggatctgaggttcagaagcagaagtacttgccatcccttgctcaacttact 3109560 Query: 319 actgttggttgctggg 334 ||||||||||||||| Sbjct: 3109559 gctgttggttgctggg 3109544
>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0041E11 Length = 146335 Score = 91.7 bits (46), Expect = 3e-15 Identities = 91/106 (85%) Strand = Plus / Minus Query: 134 agggatatgggtgcccaggactctcgcttacagcgagtgccgtttctatagcagaagttg 193 |||||||||||||||||||||| || | ||||| ||||| || |||| |||||| ||| Sbjct: 53661 agggatatgggtgcccaggactttcaataacagcaagtgctattactatggcagaaattg 53602 Query: 194 cacgggttgatgcaagctgctccacatttattttagtgcactcctc 239 ||||||| ||||||||||||||||| || ||| |||| |||||||| Sbjct: 53601 cacgggtagatgcaagctgctccacgttcattctagtacactcctc 53556 Score = 81.8 bits (41), Expect = 3e-12 Identities = 101/121 (83%) Strand = Plus / Minus Query: 503 gattcattgtgaagaagggagcgcctggtttgagagccacaaaaattcaaaacaaaattg 562 |||| ||||||| |||||| || ||||| |||| ||| ||||| ||| | |||||||||| Sbjct: 52462 gatttattgtgaggaagggtgctcctggcttgaaagctacaaagattgagaacaaaattg 52403 Query: 563 gacttagaatggttcagaatggcgatatccttctgaataaagtatttgtcccagaagaag 622 | || |||||||||||||| || ||||| || | ||||||||||||||||| || |||| Sbjct: 52402 gtctcagaatggttcagaacggtgatatagtttttaataaagtatttgtccctgaggaag 52343 Query: 623 a 623 | Sbjct: 52342 a 52342 Score = 79.8 bits (40), Expect = 1e-11 Identities = 94/112 (83%) Strand = Plus / Minus Query: 392 aggtacctggcggttggcaattagatggccaaaagcgctggataggtaacagcacgtttg 451 |||||||||| || ||||| ||||||| ||||| |||||||| |||||||| || |||| Sbjct: 52665 aggtacctggtgggtggcacatagatggacaaaaacgctggattggtaacagtacttttg 52606 Query: 452 cagatgtgcttgtaattttagctaggaatgcagacacaaagcaactaaatgg 503 | |||||||| || | |||||||||||||| | ||||| ||||||||||| Sbjct: 52605 ctgatgtgctcgtggtattagctaggaatgccaatacaaaacaactaaatgg 52554 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 58 tactgggagaaggcagaattcccatttcatgccattccgaaactt 102 ||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 54660 tactgggagaaagcagagttcccatttcatgccattcctaaactt 54616 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 340 acagagccagattatggaagtgatgcaagctccttgaaaacttcagcaaccaaggt 395 ||||| ||| || ||||||| ||||||||||| |||| |||| ||||||||||||| Sbjct: 53225 acagaaccaaatcatggaagcgatgcaagctctttgataactacagcaaccaaggt 53170 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 28 gagaaagaaattgcacccattatg 51 |||||||||||||||||||||||| Sbjct: 54986 gagaaagaaattgcacccattatg 54963 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Minus Query: 259 gctctttgtggatcagaggctcaaaagcagaagtacctaccatcgttagctcagtttaaa 318 |||||||||||||| |||| ||| |||||||||||| | ||||| | ||||| ||| Sbjct: 53407 gctctttgtggatctgaggttcagaagcagaagtacttgccatcccttgctcaacttact 53348 Query: 319 actgttggttgctggg 334 ||||||||||||||| Sbjct: 53347 gctgttggttgctggg 53332
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0433F09 Length = 150150 Score = 91.7 bits (46), Expect = 3e-15 Identities = 91/106 (85%) Strand = Plus / Minus Query: 134 agggatatgggtgcccaggactctcgcttacagcgagtgccgtttctatagcagaagttg 193 |||||||||||||||||||||| || | ||||| ||||| || |||| |||||| ||| Sbjct: 77913 agggatatgggtgcccaggactttcaataacagcaagtgctattactatggcagaaattg 77854 Query: 194 cacgggttgatgcaagctgctccacatttattttagtgcactcctc 239 ||||||| ||||||||||||||||| || ||| |||| |||||||| Sbjct: 77853 cacgggtagatgcaagctgctccacgttcattctagtacactcctc 77808 Score = 81.8 bits (41), Expect = 3e-12 Identities = 101/121 (83%) Strand = Plus / Minus Query: 503 gattcattgtgaagaagggagcgcctggtttgagagccacaaaaattcaaaacaaaattg 562 |||| ||||||| |||||| || ||||| |||| ||| ||||| ||| | |||||||||| Sbjct: 76714 gatttattgtgaggaagggtgctcctggcttgaaagctacaaagattgagaacaaaattg 76655 Query: 563 gacttagaatggttcagaatggcgatatccttctgaataaagtatttgtcccagaagaag 622 | || |||||||||||||| || ||||| || | ||||||||||||||||| || |||| Sbjct: 76654 gtctcagaatggttcagaacggtgatatagtttttaataaagtatttgtccctgaggaag 76595 Query: 623 a 623 | Sbjct: 76594 a 76594 Score = 79.8 bits (40), Expect = 1e-11 Identities = 94/112 (83%) Strand = Plus / Minus Query: 392 aggtacctggcggttggcaattagatggccaaaagcgctggataggtaacagcacgtttg 451 |||||||||| || ||||| ||||||| ||||| |||||||| |||||||| || |||| Sbjct: 76917 aggtacctggtgggtggcacatagatggacaaaaacgctggattggtaacagtacttttg 76858 Query: 452 cagatgtgcttgtaattttagctaggaatgcagacacaaagcaactaaatgg 503 | |||||||| || | |||||||||||||| | ||||| ||||||||||| Sbjct: 76857 ctgatgtgctcgtggtattagctaggaatgccaatacaaaacaactaaatgg 76806 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 58 tactgggagaaggcagaattcccatttcatgccattccgaaactt 102 ||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 78912 tactgggagaaagcagagttcccatttcatgccattcctaaactt 78868 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 340 acagagccagattatggaagtgatgcaagctccttgaaaacttcagcaaccaaggt 395 ||||| ||| || ||||||| ||||||||||| |||| |||| ||||||||||||| Sbjct: 77477 acagaaccaaatcatggaagcgatgcaagctctttgataactacagcaaccaaggt 77422 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 28 gagaaagaaattgcacccattatg 51 |||||||||||||||||||||||| Sbjct: 79238 gagaaagaaattgcacccattatg 79215 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Minus Query: 259 gctctttgtggatcagaggctcaaaagcagaagtacctaccatcgttagctcagtttaaa 318 |||||||||||||| |||| ||| |||||||||||| | ||||| | ||||| ||| Sbjct: 77659 gctctttgtggatctgaggttcagaagcagaagtacttgccatcccttgctcaacttact 77600 Query: 319 actgttggttgctggg 334 ||||||||||||||| Sbjct: 77599 gctgttggttgctggg 77584
>gb|AY600434.1| Tropaeolum majus putative short-chain acyl-CoA oxidase mRNA, complete cds Length = 1553 Score = 63.9 bits (32), Expect = 6e-07 Identities = 104/128 (81%) Strand = Plus / Plus Query: 487 acaaagcaactaaatggattcattgtgaagaagggagcgcctggtttgagagccacaaaa 546 ||||| ||| |||||||||| || || ||||||| || ||||| || | ||| |||||| Sbjct: 732 acaaatcaaataaatggatttatagtaaagaaggatgcccctggattaacagctacaaaa 791 Query: 547 attcaaaacaaaattggacttagaatggttcagaatggcgatatccttctgaataaagta 606 |||||||| |||||||| || | || ||||||||||| ||||| || |||| ||||| Sbjct: 792 attcaaaataaaattggtctgcgcattgttcagaatggagatattctcttgaagaaagtc 851 Query: 607 tttgtccc 614 |||||||| Sbjct: 852 tttgtccc 859 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 331 tgggctttaacagagccagattatggaagtga 362 |||||||| ||||||||||| ||||||||||| Sbjct: 576 tgggctttgacagagccagactatggaagtga 607
>ref|NM_115043.2| Arabidopsis thaliana ACX4 (ACYL-COA OXIDASE 4); oxidoreductase AT3G51840 (ACX4) mRNA, complete cds Length = 1759 Score = 52.0 bits (26), Expect = 0.002 Identities = 134/170 (78%) Strand = Plus / Plus Query: 199 gttgatgcaagctgctccacatttattttagtgcactcctctttggcaatgtccacaatt 258 ||||||||||| || || || || ||||| ||||| || ||||||| ||| ||| ||| Sbjct: 537 gttgatgcaagttgttcgactttcattttggtgcattcttctttgggcatgctcactatt 596 Query: 259 gctctttgtggatcagaggctcaaaagcagaagtacctaccatcgttagctcagtttaaa 318 || || ||||||||||| || || ||| ||||||| | || || || ||||| || || Sbjct: 597 gcactctgtggatcagaagcacagaaggagaagtatttgccttctttggctcaattgaat 656 Query: 319 actgttggttgctgggctttaacagagccagattatggaagtgatgcaag 368 ||||| | ||| |||||||| |||||||| || ||||||| |||||||| Sbjct: 657 actgtggcttgttgggctttgacagagcccgacaatggaagcgatgcaag 706 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 28 gagaaagaaattgcacccattatgaccgaatactgggagaaggcagaattcccatt 83 ||||||||| |||| || || ||||| || ||||||||||| |||||||| ||||| Sbjct: 366 gagaaagaagttgctccaataatgacagagtactgggagaaagcagaatttccatt 421
>gb|AY125536.1| Arabidopsis thaliana At3g51840/AtG6 mRNA, complete cds Length = 1311 Score = 52.0 bits (26), Expect = 0.002 Identities = 134/170 (78%) Strand = Plus / Plus Query: 199 gttgatgcaagctgctccacatttattttagtgcactcctctttggcaatgtccacaatt 258 ||||||||||| || || || || ||||| ||||| || ||||||| ||| ||| ||| Sbjct: 382 gttgatgcaagttgttcgactttcattttggtgcattcttctttgggcatgctcactatt 441 Query: 259 gctctttgtggatcagaggctcaaaagcagaagtacctaccatcgttagctcagtttaaa 318 || || ||||||||||| || || ||| ||||||| | || || || ||||| || || Sbjct: 442 gcactctgtggatcagaagcacagaaggagaagtatttgccttctttggctcaattgaat 501 Query: 319 actgttggttgctgggctttaacagagccagattatggaagtgatgcaag 368 ||||| | ||| |||||||| |||||||| || ||||||| |||||||| Sbjct: 502 actgtggcttgttgggctttgacagagcccgacaatggaagcgatgcaag 551 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 28 gagaaagaaattgcacccattatgaccgaatactgggagaaggcagaattcccatt 83 ||||||||| |||| || || ||||| || ||||||||||| |||||||| ||||| Sbjct: 211 gagaaagaagttgctccaataatgacagagtactgggagaaagcagaatttccatt 266
>gb|AY094441.1| Arabidopsis thaliana At3g51840/AtG6 mRNA, complete cds Length = 1718 Score = 52.0 bits (26), Expect = 0.002 Identities = 134/170 (78%) Strand = Plus / Plus Query: 199 gttgatgcaagctgctccacatttattttagtgcactcctctttggcaatgtccacaatt 258 ||||||||||| || || || || ||||| ||||| || ||||||| ||| ||| ||| Sbjct: 537 gttgatgcaagttgttcgactttcattttggtgcattcttctttgggcatgctcactatt 596 Query: 259 gctctttgtggatcagaggctcaaaagcagaagtacctaccatcgttagctcagtttaaa 318 || || ||||||||||| || || ||| ||||||| | || || || ||||| || || Sbjct: 597 gcactctgtggatcagaagcacagaaggagaagtatttgccttctttggctcaattgaat 656 Query: 319 actgttggttgctgggctttaacagagccagattatggaagtgatgcaag 368 ||||| | ||| |||||||| |||||||| || ||||||| |||||||| Sbjct: 657 actgtggcttgttgggctttgacagagcccgacaatggaagcgatgcaag 706 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 28 gagaaagaaattgcacccattatgaccgaatactgggagaaggcagaattcccatt 83 ||||||||| |||| || || ||||| || ||||||||||| |||||||| ||||| Sbjct: 366 gagaaagaagttgctccaataatgacagagtactgggagaaagcagaatttccatt 421
>gb|AY087793.1| Arabidopsis thaliana clone 3844 mRNA, complete sequence Length = 1626 Score = 52.0 bits (26), Expect = 0.002 Identities = 134/170 (78%) Strand = Plus / Plus Query: 199 gttgatgcaagctgctccacatttattttagtgcactcctctttggcaatgtccacaatt 258 ||||||||||| || || || || ||||| ||||| || ||||||| ||| ||| ||| Sbjct: 440 gttgatgcaagttgttcgactttcattttggtgcattcttctttgggcatgctcactatt 499 Query: 259 gctctttgtggatcagaggctcaaaagcagaagtacctaccatcgttagctcagtttaaa 318 || || ||||||||||| || || ||| ||||||| | || || || ||||| || || Sbjct: 500 gcactctgtggatcagaagcacagaaggagaagtatttgccttctttggctcaattgaat 559 Query: 319 actgttggttgctgggctttaacagagccagattatggaagtgatgcaag 368 ||||| | ||| |||||||| |||||||| || ||||||| |||||||| Sbjct: 560 actgtggcttgttgggctttgacagagcccgacaatggaagcgatgcaag 609 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 28 gagaaagaaattgcacccattatgaccgaatactgggagaaggcagaattcccatt 83 ||||||||| |||| || || ||||| || ||||||||||| |||||||| ||||| Sbjct: 269 gagaaagaagttgctccaataatgacagagtactgggagaaagcagaatttccatt 324
>dbj|AB017643.1| Arabidopsis thaliana mRNA for Short-chain acyl CoA oxidase, complete cds Length = 1593 Score = 52.0 bits (26), Expect = 0.002 Identities = 134/170 (78%) Strand = Plus / Plus Query: 199 gttgatgcaagctgctccacatttattttagtgcactcctctttggcaatgtccacaatt 258 ||||||||||| || || || || ||||| ||||| || ||||||| ||| ||| ||| Sbjct: 421 gttgatgcaagttgttcgactttcattttggtgcattcttctttgggcatgctcactatt 480 Query: 259 gctctttgtggatcagaggctcaaaagcagaagtacctaccatcgttagctcagtttaaa 318 || || ||||||||||| || || ||| ||||||| | || || || ||||| || || Sbjct: 481 gcactctgtggatcagaagcacagaaggagaagtatttgccttctttggctcaattgaat 540 Query: 319 actgttggttgctgggctttaacagagccagattatggaagtgatgcaag 368 ||||| | ||| |||||||| |||||||| || ||||||| |||||||| Sbjct: 541 actgtggcttgttgggctttgacagagcccgacaatggaagcgatgcaag 590 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 28 gagaaagaaattgcacccattatgaccgaatactgggagaaggcagaattcccatt 83 ||||||||| |||| || || ||||| || ||||||||||| |||||||| ||||| Sbjct: 250 gagaaagaagttgctccaataatgacagagtactgggagaaagcagaatttccatt 305
>gb|U72505.1|ATU72505 Arabidopsis thaliana putative acyl-coA dehydrogenase G6p (AtG6) mRNA, complete cds Length = 1579 Score = 52.0 bits (26), Expect = 0.002 Identities = 134/170 (78%) Strand = Plus / Plus Query: 199 gttgatgcaagctgctccacatttattttagtgcactcctctttggcaatgtccacaatt 258 ||||||||||| || || || || ||||| ||||| || ||||||| ||| ||| ||| Sbjct: 407 gttgatgcaagttgttcgactttcattttggtgcattcttctttgggcatgctcactatt 466 Query: 259 gctctttgtggatcagaggctcaaaagcagaagtacctaccatcgttagctcagtttaaa 318 || || ||||||||||| || || ||| ||||||| | || || || ||||| || || Sbjct: 467 gcactctgtggatcagaagcacagaaggagaagtatttgccttctttggctcaattgaat 526 Query: 319 actgttggttgctgggctttaacagagccagattatggaagtgatgcaag 368 ||||| | ||| |||||||| |||||||| || ||||||| |||||||| Sbjct: 527 actgtggcttgttgggctttgacagagcccgacaatggaagcgatgcaag 576 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 28 gagaaagaaattgcacccattatgaccgaatactgggagaaggcagaattcccatt 83 ||||||||| |||| || || ||||| || ||||||||||| |||||||| ||||| Sbjct: 236 gagaaagaagttgctccaataatgacagagtactgggagaaagcagaatttccatt 291
>emb|AL671918.5| Mouse DNA sequence from clone RP23-172E13 on chromosome X, complete sequence Length = 121205 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 543 aaaaattcaaaacaaaattggacttagaatggttc 577 ||||||||||| |||||||| ||||||||| |||| Sbjct: 53262 aaaaattcaaagcaaaattgcacttagaattgttc 53296
>emb|AL390997.10| Human DNA sequence from clone RP11-159G6 on chromosome Xq21.33-23, complete sequence Length = 112328 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 22 atttcagagaaagaaattgcacccat 47 ||||||||||||||||||||| |||| Sbjct: 76985 atttcagagaaagaaattgcagccat 76960
>gb|AC151908.8| Mus musculus BAC clone RP23-109A22 from chromosome 8, complete sequence Length = 233606 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 ctcagtttaaaactgttggtt 328 ||||||||||||||||||||| Sbjct: 164757 ctcagtttaaaactgttggtt 164737
>gb|AC092576.3| Homo sapiens BAC clone RP11-7N16 from 2, complete sequence Length = 152747 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 caaaaattcaaaacaaaattg 562 ||||||||||||||||||||| Sbjct: 91240 caaaaattcaaaacaaaattg 91260
>gb|AC122236.5| Mus musculus BAC clone RP23-141I22 from 8, complete sequence Length = 214447 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 ctcagtttaaaactgttggtt 328 ||||||||||||||||||||| Sbjct: 123295 ctcagtttaaaactgttggtt 123315
>gb|AC124664.14| Mus musculus chromosome 1, clone RP23-103B18, complete sequence Length = 220456 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 535 agagccacaaaaattcaaaacaaa 558 |||||||||||| ||||||||||| Sbjct: 131986 agagccacaaaagttcaaaacaaa 131963
>gb|AC004648.1| Homo sapiens chromosome 5, PAC clone 17e19 (LBNL H148), complete sequence Length = 140101 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 gatcagaggctcaaaagcag 288 |||||||||||||||||||| Sbjct: 12207 gatcagaggctcaaaagcag 12188
>gb|AC105152.10| Mus musculus chromosome 1, clone RP23-265D3, complete sequence Length = 230407 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 gctttaacagagccagatta 353 |||||||||||||||||||| Sbjct: 207480 gctttaacagagccagatta 207499
>gb|AC090890.3| Canis familiaris clone RP81-196D8, complete sequence Length = 175287 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 acaaaattggacttagaatg 573 |||||||||||||||||||| Sbjct: 155879 acaaaattggacttagaatg 155898
>emb|BX571706.24| Zebrafish DNA sequence from clone DKEYP-123H11 in linkage group 11, complete sequence Length = 196333 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 aatgcagacacaaagcaact 497 |||||||||||||||||||| Sbjct: 169882 aatgcagacacaaagcaact 169863
>gb|AC138222.15| Mus musculus chromosome 1, clone RP23-380H16, complete sequence Length = 184152 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 gctttaacagagccagatta 353 |||||||||||||||||||| Sbjct: 169542 gctttaacagagccagatta 169561
>gb|AC148448.3| Pan troglodytes chromosome X clone PTB-007I07 map human ortholog q22.1, complete sequence Length = 44375 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 acaaaaattcaaaacaaaat 560 |||||||||||||||||||| Sbjct: 15893 acaaaaattcaaaacaaaat 15874
>gb|AC122169.24| Medicago truncatula clone mth2-9m5, complete sequence Length = 125652 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 agcaactaaatggattcatt 510 |||||||||||||||||||| Sbjct: 55565 agcaactaaatggattcatt 55546
>emb|AL359694.17| Human DNA sequence from clone RP11-524C21 on chromosome 6 Contains a pseudogene similar to mesenchymal stem cell protein DSC92, complete sequence Length = 95369 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 ggatcagaggctcaaaagca 287 |||||||||||||||||||| Sbjct: 16438 ggatcagaggctcaaaagca 16457
>emb|AL137060.13| Human DNA sequence from clone RP11-34F20 on chromosome 13 Contains the 3' end of the RFP2 gene for ret finger protein 2, the DLEU2 gene for deleted in lymphocytic leukemia 2 (LEU2 BCMSUN), the 5' end of the DLEU1 gene for deleted in lymphocytic leukemia 1 (BCMS LEU1), a ribosomal protein L18 (RPL18) pseudogene, a novel gene and four CpG islands, complete sequence Length = 154887 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 aaattcaaaacaaaattgga 564 |||||||||||||||||||| Sbjct: 13031 aaattcaaaacaaaattgga 13050
>emb|AL035422.12|HS164F3 Human DNA sequence from clone RP1-164F3 on chromosome Xq21.33-23 Contains a ribosomal protein L21 (RPL21) pseudogene, the TIMM8A gene for translocase of inner mitochondrial membrane 8 homolog A (yeast), the BTK gene for Bruton agammaglobulinemia tyrosine kinase, the RPL36A gene for ribosomal protein L36a, the GLA gene for alpha galactosidase, the HNRPH2 gene for heterogeneous nuclear ribonucleoprotein H2 (H'), the gene for a novel protein, a peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene and two CpG islands, complete sequence Length = 136693 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 acaaaaattcaaaacaaaat 560 |||||||||||||||||||| Sbjct: 5255 acaaaaattcaaaacaaaat 5236
>emb|AL596025.22| Mouse DNA sequence from clone RP23-215H18 on chromosome 11 Contains a novel gene and the 3' end of a gene that is a possible ortholog of human dynein axonemal heavy polypeptide 9 (DNAH9), complete sequence Length = 190066 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 aaattggacttagaatggtt 576 |||||||||||||||||||| Sbjct: 134866 aaattggacttagaatggtt 134885
>emb|AL606764.19| Mouse DNA sequence from clone RP23-412P21 on chromosome 13 Contains the gene for 2410030I24RIK protein similar to human SEC5 and the gene for Hus1 homolog (S. pombe) B (Hus1b), complete sequence Length = 127433 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 330 ctgggctttaacagagccagattatgga 357 ||||||||||| |||||||| ||||||| Sbjct: 92003 ctgggctttaagagagccagcttatgga 92030
>emb|BX293556.14| Zebrafish DNA sequence from clone DKEY-21N20 in linkage group 11, complete sequence Length = 212880 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 aatgcagacacaaagcaact 497 |||||||||||||||||||| Sbjct: 29954 aatgcagacacaaagcaact 29935
>gb|AF440619.1|AF440619 Homo sapiens 13q14 chronic lymphocytic leukemia suppressor locus section 1 of 2 Length = 350000 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 aaattcaaaacaaaattgga 564 |||||||||||||||||||| Sbjct: 70195 aaattcaaaacaaaattgga 70214
>gb|AF279660.2|AF279660 Homo sapiens CAR (RFP2) gene, complete cds; DLEU2 and DLEU1 genes, complete sequence; and RPL18 and p48/Hip pseudogenes, complete sequence Length = 347503 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 aaattcaaaacaaaattgga 564 |||||||||||||||||||| Sbjct: 22647 aaattcaaaacaaaattgga 22666
>gb|AC158996.2| Mus musculus BAC clone RP24-137I10 from chromosome 9, complete sequence Length = 154654 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gaatactgggagaaggcaga 74 |||||||||||||||||||| Sbjct: 99164 gaatactgggagaaggcaga 99183
>dbj|AK037659.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130034M19 product:unclassifiable, full insert sequence Length = 5528 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 330 ctgggctttaacagagccagattatgga 357 ||||||||||| |||||||| ||||||| Sbjct: 3103 ctgggctttaagagagccagcttatgga 3076
>gb|AF334404.1|AF334404 Homo sapiens chromosome 13q14 BAC clone CITB-369L16, complete sequence Length = 154868 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 aaattcaaaacaaaattgga 564 |||||||||||||||||||| Sbjct: 70195 aaattcaaaacaaaattgga 70214
>gb|AC068042.5| Homo sapiens BAC clone RP11-535B12 from 2, complete sequence Length = 172617 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 gaagaagacagattaacagg 635 |||||||||||||||||||| Sbjct: 168364 gaagaagacagattaacagg 168383
>gb|AC139868.4| Mus musculus BAC clone RP23-366P1 from chromosome 18, complete sequence Length = 154607 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 483 agacacaaagcaactaaatggatt 506 |||||||||||||||| ||||||| Sbjct: 58591 agacacaaagcaactagatggatt 58568
>emb|AL928927.10| Zebrafish DNA sequence from clone CH211-113H16, complete sequence Length = 168805 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 acaaaaattcaaaacaaaat 560 |||||||||||||||||||| Sbjct: 158269 acaaaaattcaaaacaaaat 158288
>emb|BX539323.11| Zebrafish DNA sequence from clone DKEY-58P11 in linkage group 19, complete sequence Length = 87362 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 cttctgaataaagtatttgt 611 |||||||||||||||||||| Sbjct: 17099 cttctgaataaagtatttgt 17118
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctcaaaagcagaagtacct 296 |||||||||||||||||||| Sbjct: 168756 gctcaaaagcagaagtacct 168775
>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome Length = 1799146 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 aaaaattcaaaacaaaattg 562 |||||||||||||||||||| Sbjct: 162863 aaaaattcaaaacaaaattg 162882
>gb|AC003089.1|AC003089 Human BAC clone RG180F08A, complete sequence Length = 126198 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 gatcagaggctcaaaagcag 288 |||||||||||||||||||| Sbjct: 34310 gatcagaggctcaaaagcag 34329
>gb|U78027.1|HSU78027 Homo sapiens Bruton's tyrosine kinase (BTK), alpha-D-galactosidase A (GLA), L44-like ribosomal protein (L44L) and FTP3 (FTP3) genes, complete cds Length = 99014 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 acaaaaattcaaaacaaaat 560 |||||||||||||||||||| Sbjct: 97997 acaaaaattcaaaacaaaat 98016
>emb|AL845313.9| Mouse DNA sequence from clone RP23-202C2 on chromosome 2, complete sequence Length = 214895 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tagtgcactcctctttggca 246 |||||||||||||||||||| Sbjct: 27649 tagtgcactcctctttggca 27668 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,234,145 Number of Sequences: 3902068 Number of extensions: 7234145 Number of successful extensions: 143069 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 52 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 142820 Number of HSP's gapped (non-prelim): 243 length of query: 651 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 628 effective length of database: 17,143,297,704 effective search space: 10765990958112 effective search space used: 10765990958112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
