ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd11f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 77 5e-14
2FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 68 2e-11
3APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 46 9e-05
4APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 44 3e-04
5MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, trac... 32 1.8
6GL12_ARATH (Q9M8X1) Putative germin-like protein subfamily 1 mem... 32 1.8
7PTPRS_HUMAN (Q13332) Receptor-type tyrosine-protein phosphatase ... 30 5.4
8POLN_EEVV3 (P36327) Nonstructural polyprotein (Polyprotein nsP12... 30 7.0
9POLN_EEVVT (P27282) Nonstructural polyprotein (Polyprotein nsP12... 30 7.0
10POLN_EEVVP (P36328) Nonstructural polyprotein (Polyprotein nsP12... 30 7.0
11POLN_EEVVM (Q9WJC7) Nonstructural polyprotein (Polyprotein nsP12... 29 9.2
12POLN_EEVVC (Q8V294) Nonstructural polyprotein (Polyprotein nsP12... 29 9.2

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 76.6 bits (187), Expect = 5e-14
 Identities = 47/166 (28%), Positives = 71/166 (42%)
 Frame = +1

Query: 82  YFSKSLFVVGEFGGNDYNAPLFSGVAFSDVKTYVPLVAKAIANGVEKLIELGATDLLVPG 261
           YF K+L+   + G ND     F  +   +V   VP +  + +  V+K+ +LGA    +  
Sbjct: 165 YFEKALYTF-DIGQNDLTEG-FLNLTVEEVNATVPDLVNSFSANVKKIYDLGARTFWIHN 222

Query: 262 ILPIGCFPLYLTLYNSSKKSDYNARTGCLRRYNRLAFHHNREXXXXXXXXXXXYPKTKIM 441
             PIGC    LT +  ++K       GC + YN +A H N +            P    +
Sbjct: 223 TGPIGCLSFILTYFPWAEKDS----AGCAKAYNEVAQHFNHKLKEIVAQLRKDLPLATFV 278

Query: 442 YGDYFKAAMQFVVSPGKFGFSTALQACCGAGGSGAYNFNLKKKCGE 579
           + D +         P K GF   L  CCG GG   YNF++   CG+
Sbjct: 279 HVDIYSVKYSLFSEPEKHGFEFPLITCCGYGGK--YNFSVTAPCGD 322



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 46/166 (27%), Positives = 69/166 (41%)
 Frame = +1

Query: 79  DYFSKSLFVVGEFGGNDYNAPLFSGVAFSDVKTYVPLVAKAIANGVEKLIELGATDLLVP 258
           D FSK+L+   + G ND  A  F+      V+T VP +     N ++ +   G     + 
Sbjct: 159 DSFSKALYTF-DIGQNDLTAGYFANKTVEQVETEVPEIISQFMNAIKNIYGQGGRYFWIH 217

Query: 259 GILPIGCFPLYLTLYNSSKKSDYNARTGCLRRYNRLAFHHNREXXXXXXXXXXXYPKTKI 438
              PIGC    +  +  +K SD+++  GC+   N LA   N               +  I
Sbjct: 218 NTGPIGCLAYVIERF-PNKASDFDSH-GCVSPLNHLAQQFNHALKQAVIELRSSLSEAAI 275

Query: 439 MYGDYFKAAMQFVVSPGKFGFSTALQACCGAGGSGAYNFNLKKKCG 576
            Y D +    +  V     GF  +L +CCG GG   YN+N    CG
Sbjct: 276 TYVDVYSLKHELFVHAQGHGFKGSLVSCCGHGGK--YNYNKGIGCG 319



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>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 41/160 (25%), Positives = 62/160 (38%), Gaps = 3/160 (1%)
 Frame = +1

Query: 64  EKECKDYFSKSLFVVGEFGGNDYNAPLFSGVAF---SDVKTYVPLVAKAIANGVEKLIEL 234
           +K+ K   SK   +V   G ND     F   A    +DV ++  ++A + A+ V +L   
Sbjct: 251 KKKTKKIVSKGAAIVVA-GSNDLIYTYFGNGAQHLKNDVDSFTTMMADSAASFVLQLYGY 309

Query: 235 GATDLLVPGILPIGCFPLYLTLYNSSKKSDYNARTGCLRRYNRLAFHHNREXXXXXXXXX 414
           GA  + V G  PIGC P                +  C    N  A   N +         
Sbjct: 310 GARRIGVIGTPPIGCTP----------SQRVKKKKICNEDLNYAAQLFNSKLVIILGQLS 359

Query: 415 XXYPKTKIMYGDYFKAAMQFVVSPGKFGFSTALQACCGAG 534
              P + I+YGD +    + + SP  +GF    + CC  G
Sbjct: 360 KTLPNSTIVYGDIYSIFSKMLESPEDYGFEEIKKPCCKIG 399



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 40/172 (23%), Positives = 65/172 (37%), Gaps = 5/172 (2%)
 Frame = +1

Query: 103 VVGEFGGNDYNAPLFSGVAF---SDVKTYVPLVAKAIANGVEKLIELGATDLLVPGILPI 273
           VVG  G ND     F   A    +D+ +Y  ++A + A+ V +L   GA  + V G  P+
Sbjct: 348 VVG--GSNDLIITYFGSGAQRLKNDIDSYTTIIADSAASFVLQLYGYGARRIGVIGTPPL 405

Query: 274 GCFPLYLTLYNSSKKSDYNARTGCLRRYNRLAFHHNREXXXXXXXXXXXYPKTKIMYGDY 453
           GC P                +  C    N  +   N +            P +  +Y D 
Sbjct: 406 GCVP----------SQRLKKKKICNEELNYASQLFNSKLLLILGQLSKTLPNSTFVYMDI 455

Query: 454 FKAAMQFVVSPGKFGFSTALQACCGAG--GSGAYNFNLKKKCGEAGASVCSN 603
           +    Q + +P  +GF    + CC  G   +GA        C ++ + +C N
Sbjct: 456 YTIISQMLETPAAYGFEETKKPCCKTGLLSAGAL-------CKKSTSKICPN 500



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>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -2

Query: 275  PIGRIPGTNRS-VAPSSINFSTPLAMALATSGT*VFTSEKATPENRGAL*SFPPNSPTT 102
            P    P T+ S V PSSI  +T  A  L T+ T V T   ATP +       PP+  TT
Sbjct: 4566 PTTTTPTTSGSTVTPSSIPGTTHTARVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTT 4624



 Score = 30.8 bits (68), Expect = 3.2
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = -2

Query: 245  SVAPSSINFSTPLAMALATSGT*VFTSEKATPENRGAL*SFPPNSPTT 102
            +V PSSI  +T  A  L T+ T V T   ATP +       PP+  TT
Sbjct: 3316 TVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTT 3363



 Score = 30.8 bits (68), Expect = 3.2
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = -2

Query: 245  SVAPSSINFSTPLAMALATSGT*VFTSEKATPENRGAL*SFPPNSPTT 102
            +V PSSI  +T  A  L T+ T V T   ATP +       PP+  TT
Sbjct: 2618 TVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTT 2665



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>GL12_ARATH (Q9M8X1) Putative germin-like protein subfamily 1 member 2|
           precursor
          Length = 229

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +1

Query: 91  KSLFVVGEFGGNDYNAPLFSGVAF-SDVKTY-VPLVAKAIANGVEKLIELGATDLLVPGI 264
           K    VG    NDYN  LFS + +  DV  + + LV      G    + +G      PG+
Sbjct: 125 KGQLSVGFVSSNDYNYTLFSKILYPGDVFAFPIGLVQFHANTGKTHAVAIGVVGSQDPGV 184

Query: 265 LPIG 276
           +PIG
Sbjct: 185 IPIG 188



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>PTPRS_HUMAN (Q13332) Receptor-type tyrosine-protein phosphatase S precursor (EC|
            3.1.3.48) (R-PTP-S) (Protein-tyrosine phosphatase sigma)
            (R-PTP-sigma)
          Length = 1948

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
 Frame = +1

Query: 139  PLFSGVAFSDVKTYVPLVAKAIANGVEKLIELGATDLLVPGILPIGCFPLYLTLYNS--- 309
            P F+   FSD         + I +G E LI +    L V  I+   C  + + LY +   
Sbjct: 1255 PTFAASPFSDPFQLDNPDPQPIVDGEEGLIWVIGPVLAVVFII---CIVIAILLYKNKPD 1311

Query: 310  SKKSDYNARTGCLRRYNRLAFHHNRE 387
            SK+ D   RT CL     LA HH ++
Sbjct: 1312 SKRKDSEPRTKCLLNNADLAPHHPKD 1337



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>POLN_EEVV3 (P36327) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2485

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 536  PPAPQHACNAVLKPNFPGLTTNCI 465
            P     ACNA+LK NFP + + CI
Sbjct: 1995 PKVAVEACNAMLKENFPTVASYCI 2018



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>POLN_EEVVT (P27282) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2492

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 536  PPAPQHACNAVLKPNFPGLTTNCI 465
            P     ACNA+LK NFP + + CI
Sbjct: 2002 PKVAVEACNAMLKENFPTVASYCI 2025



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>POLN_EEVVP (P36328) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2492

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 536  PPAPQHACNAVLKPNFPGLTTNCI 465
            P     ACNA+LK NFP + + CI
Sbjct: 2002 PKVAVEACNAMLKENFPTVASYCI 2025



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>POLN_EEVVM (Q9WJC7) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2498

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 536  PPAPQHACNAVLKPNFPGLTTNCI 465
            P     ACN VLK NFP + + CI
Sbjct: 2008 PKVAVEACNVVLKENFPTVASYCI 2031



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>POLN_EEVVC (Q8V294) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2496

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 536  PPAPQHACNAVLKPNFPGLTTNCI 465
            P     ACN VLK NFP + + CI
Sbjct: 2006 PKVAVEACNVVLKENFPTVASYCI 2029


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,314,928
Number of Sequences: 219361
Number of extensions: 1368838
Number of successful extensions: 4136
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4132
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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