| Clone Name | basd11f09 |
|---|---|
| Clone Library Name | barley_pub |
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 76.6 bits (187), Expect = 5e-14 Identities = 47/166 (28%), Positives = 71/166 (42%) Frame = +1 Query: 82 YFSKSLFVVGEFGGNDYNAPLFSGVAFSDVKTYVPLVAKAIANGVEKLIELGATDLLVPG 261 YF K+L+ + G ND F + +V VP + + + V+K+ +LGA + Sbjct: 165 YFEKALYTF-DIGQNDLTEG-FLNLTVEEVNATVPDLVNSFSANVKKIYDLGARTFWIHN 222 Query: 262 ILPIGCFPLYLTLYNSSKKSDYNARTGCLRRYNRLAFHHNREXXXXXXXXXXXYPKTKIM 441 PIGC LT + ++K GC + YN +A H N + P + Sbjct: 223 TGPIGCLSFILTYFPWAEKDS----AGCAKAYNEVAQHFNHKLKEIVAQLRKDLPLATFV 278 Query: 442 YGDYFKAAMQFVVSPGKFGFSTALQACCGAGGSGAYNFNLKKKCGE 579 + D + P K GF L CCG GG YNF++ CG+ Sbjct: 279 HVDIYSVKYSLFSEPEKHGFEFPLITCCGYGGK--YNFSVTAPCGD 322
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 67.8 bits (164), Expect = 2e-11 Identities = 46/166 (27%), Positives = 69/166 (41%) Frame = +1 Query: 79 DYFSKSLFVVGEFGGNDYNAPLFSGVAFSDVKTYVPLVAKAIANGVEKLIELGATDLLVP 258 D FSK+L+ + G ND A F+ V+T VP + N ++ + G + Sbjct: 159 DSFSKALYTF-DIGQNDLTAGYFANKTVEQVETEVPEIISQFMNAIKNIYGQGGRYFWIH 217 Query: 259 GILPIGCFPLYLTLYNSSKKSDYNARTGCLRRYNRLAFHHNREXXXXXXXXXXXYPKTKI 438 PIGC + + +K SD+++ GC+ N LA N + I Sbjct: 218 NTGPIGCLAYVIERF-PNKASDFDSH-GCVSPLNHLAQQFNHALKQAVIELRSSLSEAAI 275 Query: 439 MYGDYFKAAMQFVVSPGKFGFSTALQACCGAGGSGAYNFNLKKKCG 576 Y D + + V GF +L +CCG GG YN+N CG Sbjct: 276 TYVDVYSLKHELFVHAQGHGFKGSLVSCCGHGGK--YNYNKGIGCG 319
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 45.8 bits (107), Expect = 9e-05 Identities = 41/160 (25%), Positives = 62/160 (38%), Gaps = 3/160 (1%) Frame = +1 Query: 64 EKECKDYFSKSLFVVGEFGGNDYNAPLFSGVAF---SDVKTYVPLVAKAIANGVEKLIEL 234 +K+ K SK +V G ND F A +DV ++ ++A + A+ V +L Sbjct: 251 KKKTKKIVSKGAAIVVA-GSNDLIYTYFGNGAQHLKNDVDSFTTMMADSAASFVLQLYGY 309 Query: 235 GATDLLVPGILPIGCFPLYLTLYNSSKKSDYNARTGCLRRYNRLAFHHNREXXXXXXXXX 414 GA + V G PIGC P + C N A N + Sbjct: 310 GARRIGVIGTPPIGCTP----------SQRVKKKKICNEDLNYAAQLFNSKLVIILGQLS 359 Query: 415 XXYPKTKIMYGDYFKAAMQFVVSPGKFGFSTALQACCGAG 534 P + I+YGD + + + SP +GF + CC G Sbjct: 360 KTLPNSTIVYGDIYSIFSKMLESPEDYGFEEIKKPCCKIG 399
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 44.3 bits (103), Expect = 3e-04 Identities = 40/172 (23%), Positives = 65/172 (37%), Gaps = 5/172 (2%) Frame = +1 Query: 103 VVGEFGGNDYNAPLFSGVAF---SDVKTYVPLVAKAIANGVEKLIELGATDLLVPGILPI 273 VVG G ND F A +D+ +Y ++A + A+ V +L GA + V G P+ Sbjct: 348 VVG--GSNDLIITYFGSGAQRLKNDIDSYTTIIADSAASFVLQLYGYGARRIGVIGTPPL 405 Query: 274 GCFPLYLTLYNSSKKSDYNARTGCLRRYNRLAFHHNREXXXXXXXXXXXYPKTKIMYGDY 453 GC P + C N + N + P + +Y D Sbjct: 406 GCVP----------SQRLKKKKICNEELNYASQLFNSKLLLILGQLSKTLPNSTFVYMDI 455 Query: 454 FKAAMQFVVSPGKFGFSTALQACCGAG--GSGAYNFNLKKKCGEAGASVCSN 603 + Q + +P +GF + CC G +GA C ++ + +C N Sbjct: 456 YTIISQMLETPAAYGFEETKKPCCKTGLLSAGAL-------CKKSTSKICPN 500
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 31.6 bits (70), Expect = 1.8 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = -2 Query: 275 PIGRIPGTNRS-VAPSSINFSTPLAMALATSGT*VFTSEKATPENRGAL*SFPPNSPTT 102 P P T+ S V PSSI +T A L T+ T V T ATP + PP+ TT Sbjct: 4566 PTTTTPTTSGSTVTPSSIPGTTHTARVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTT 4624 Score = 30.8 bits (68), Expect = 3.2 Identities = 19/48 (39%), Positives = 24/48 (50%) Frame = -2 Query: 245 SVAPSSINFSTPLAMALATSGT*VFTSEKATPENRGAL*SFPPNSPTT 102 +V PSSI +T A L T+ T V T ATP + PP+ TT Sbjct: 3316 TVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTT 3363 Score = 30.8 bits (68), Expect = 3.2 Identities = 19/48 (39%), Positives = 24/48 (50%) Frame = -2 Query: 245 SVAPSSINFSTPLAMALATSGT*VFTSEKATPENRGAL*SFPPNSPTT 102 +V PSSI +T A L T+ T V T ATP + PP+ TT Sbjct: 2618 TVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTT 2665
>GL12_ARATH (Q9M8X1) Putative germin-like protein subfamily 1 member 2| precursor Length = 229 Score = 31.6 bits (70), Expect = 1.8 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Frame = +1 Query: 91 KSLFVVGEFGGNDYNAPLFSGVAF-SDVKTY-VPLVAKAIANGVEKLIELGATDLLVPGI 264 K VG NDYN LFS + + DV + + LV G + +G PG+ Sbjct: 125 KGQLSVGFVSSNDYNYTLFSKILYPGDVFAFPIGLVQFHANTGKTHAVAIGVVGSQDPGV 184 Query: 265 LPIG 276 +PIG Sbjct: 185 IPIG 188
>PTPRS_HUMAN (Q13332) Receptor-type tyrosine-protein phosphatase S precursor (EC| 3.1.3.48) (R-PTP-S) (Protein-tyrosine phosphatase sigma) (R-PTP-sigma) Length = 1948 Score = 30.0 bits (66), Expect = 5.4 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 3/86 (3%) Frame = +1 Query: 139 PLFSGVAFSDVKTYVPLVAKAIANGVEKLIELGATDLLVPGILPIGCFPLYLTLYNS--- 309 P F+ FSD + I +G E LI + L V I+ C + + LY + Sbjct: 1255 PTFAASPFSDPFQLDNPDPQPIVDGEEGLIWVIGPVLAVVFII---CIVIAILLYKNKPD 1311 Query: 310 SKKSDYNARTGCLRRYNRLAFHHNRE 387 SK+ D RT CL LA HH ++ Sbjct: 1312 SKRKDSEPRTKCLLNNADLAPHHPKD 1337
>POLN_EEVV3 (P36327) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC Length = 2485 Score = 29.6 bits (65), Expect = 7.0 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -2 Query: 536 PPAPQHACNAVLKPNFPGLTTNCI 465 P ACNA+LK NFP + + CI Sbjct: 1995 PKVAVEACNAMLKENFPTVASYCI 2018
>POLN_EEVVT (P27282) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC Length = 2492 Score = 29.6 bits (65), Expect = 7.0 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -2 Query: 536 PPAPQHACNAVLKPNFPGLTTNCI 465 P ACNA+LK NFP + + CI Sbjct: 2002 PKVAVEACNAMLKENFPTVASYCI 2025
>POLN_EEVVP (P36328) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC Length = 2492 Score = 29.6 bits (65), Expect = 7.0 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -2 Query: 536 PPAPQHACNAVLKPNFPGLTTNCI 465 P ACNA+LK NFP + + CI Sbjct: 2002 PKVAVEACNAMLKENFPTVASYCI 2025
>POLN_EEVVM (Q9WJC7) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC Length = 2498 Score = 29.3 bits (64), Expect = 9.2 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -2 Query: 536 PPAPQHACNAVLKPNFPGLTTNCI 465 P ACN VLK NFP + + CI Sbjct: 2008 PKVAVEACNVVLKENFPTVASYCI 2031
>POLN_EEVVC (Q8V294) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC Length = 2496 Score = 29.3 bits (64), Expect = 9.2 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -2 Query: 536 PPAPQHACNAVLKPNFPGLTTNCI 465 P ACN VLK NFP + + CI Sbjct: 2006 PKVAVEACNVVLKENFPTVASYCI 2029 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,314,928 Number of Sequences: 219361 Number of extensions: 1368838 Number of successful extensions: 4136 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 4007 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4132 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)