ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd11e16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_192582.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1509 Score = 492 bits (248), Expect = e-136 Identities = 377/420 (89%) Strand = Plus / Plus Query: 101 aggggtttgaggtgccggaactggacatcaagttcaccaagctcttcatcaatggccagt 160 ||||||| ||||||||| | ||||| ||||||||||||||||||||||||||||||| | Sbjct: 29 aggggttcgaggtgccgaagctggagatcaagttcaccaagctcttcatcaatggccgct 88 Query: 161 tcgtcgacgcagcttcaggcaagacgttcgagacccgggacccacgcaccggcgaggtga 220 |||||||||| | || |||||||| ||||| ||||| ||||| |||||||||||||| | Sbjct: 89 tcgtcgacgccgtctccggcaagacattcgaaacccgtgacccgcgcaccggcgaggtca 148 Query: 221 tcgccaggatcgccgagggagacaaggccgacatcgacctcgccgtgaaggccgcccgcg 280 |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| | | Sbjct: 149 tcgccaagatcgccgaaggagacaaggccgacatcgacctcgccgtgaaggccgccaggg 208 Query: 281 cggccttcgacaacggcccctggcccagaatgcccggctgcgcaagggcaaggatcctgc 340 |||||||||| | ||||||||||| |||||| |||||| || |||| ||||||||||| Sbjct: 209 aggccttcgaccatggcccctggccaagaatgtccggctttgcgaggggaaggatcctgc 268 Query: 341 acaagttcgccgacctggtcgaccagcacgtggaggagctggcggcgctggacacggtgg 400 |||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 269 acaagttcgcggacctggtggagcagcacgtggaggagctggcggcgctggacacggtgg 328 Query: 401 acgccggcaagctgttccagatgggcaagctggtggacatccccggaggcgccaacctgc 460 ||||||||||||||||| |||||| ||||| || ||||||||||| ||||| ||||||| Sbjct: 329 acgccggcaagctgttcgcgatggggaagctcgtcgacatccccggcggcgcgaacctgc 388 Query: 461 tccggtactacgccggtgccgccgacaagatccacggcgagacgctcaagatggcgcggc 520 |||||||||||||||| || || |||||| | |||||||||||||||||||||||||||| Sbjct: 389 tccggtactacgccggcgcggcggacaaggtgcacggcgagacgctcaagatggcgcggc 448
>dbj|AK121462.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144F17, full insert sequence Length = 1732 Score = 492 bits (248), Expect = e-136 Identities = 377/420 (89%) Strand = Plus / Plus Query: 101 aggggtttgaggtgccggaactggacatcaagttcaccaagctcttcatcaatggccagt 160 ||||||| ||||||||| | ||||| ||||||||||||||||||||||||||||||| | Sbjct: 103 aggggttcgaggtgccgaagctggagatcaagttcaccaagctcttcatcaatggccgct 162 Query: 161 tcgtcgacgcagcttcaggcaagacgttcgagacccgggacccacgcaccggcgaggtga 220 |||||||||| | || |||||||| ||||| ||||| ||||| |||||||||||||| | Sbjct: 163 tcgtcgacgccgtctccggcaagacattcgaaacccgtgacccgcgcaccggcgaggtca 222 Query: 221 tcgccaggatcgccgagggagacaaggccgacatcgacctcgccgtgaaggccgcccgcg 280 |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| | | Sbjct: 223 tcgccaagatcgccgaaggagacaaggccgacatcgacctcgccgtgaaggccgccaggg 282 Query: 281 cggccttcgacaacggcccctggcccagaatgcccggctgcgcaagggcaaggatcctgc 340 |||||||||| | ||||||||||| |||||| |||||| || |||| ||||||||||| Sbjct: 283 aggccttcgaccatggcccctggccaagaatgtccggctttgcgaggggaaggatcctgc 342 Query: 341 acaagttcgccgacctggtcgaccagcacgtggaggagctggcggcgctggacacggtgg 400 |||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 343 acaagttcgcggacctggtggagcagcacgtggaggagctggcggcgctggacacggtgg 402 Query: 401 acgccggcaagctgttccagatgggcaagctggtggacatccccggaggcgccaacctgc 460 ||||||||||||||||| |||||| ||||| || ||||||||||| ||||| ||||||| Sbjct: 403 acgccggcaagctgttcgcgatggggaagctcgtcgacatccccggcggcgcgaacctgc 462 Query: 461 tccggtactacgccggtgccgccgacaagatccacggcgagacgctcaagatggcgcggc 520 |||||||||||||||| || || |||||| | |||||||||||||||||||||||||||| Sbjct: 463 tccggtactacgccggcgcggcggacaaggtgcacggcgagacgctcaagatggcgcggc 522
>dbj|AK119571.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-A10, full insert sequence Length = 1854 Score = 492 bits (248), Expect = e-136 Identities = 377/420 (89%) Strand = Plus / Plus Query: 101 aggggtttgaggtgccggaactggacatcaagttcaccaagctcttcatcaatggccagt 160 ||||||| ||||||||| | ||||| ||||||||||||||||||||||||||||||| | Sbjct: 145 aggggttcgaggtgccgaagctggagatcaagttcaccaagctcttcatcaatggccgct 204 Query: 161 tcgtcgacgcagcttcaggcaagacgttcgagacccgggacccacgcaccggcgaggtga 220 |||||||||| | || |||||||| ||||| ||||| ||||| |||||||||||||| | Sbjct: 205 tcgtcgacgccgtctccggcaagacattcgaaacccgtgacccgcgcaccggcgaggtca 264 Query: 221 tcgccaggatcgccgagggagacaaggccgacatcgacctcgccgtgaaggccgcccgcg 280 |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| | | Sbjct: 265 tcgccaagatcgccgaaggagacaaggccgacatcgacctcgccgtgaaggccgccaggg 324 Query: 281 cggccttcgacaacggcccctggcccagaatgcccggctgcgcaagggcaaggatcctgc 340 |||||||||| | ||||||||||| |||||| |||||| || |||| ||||||||||| Sbjct: 325 aggccttcgaccatggcccctggccaagaatgtccggctttgcgaggggaaggatcctgc 384 Query: 341 acaagttcgccgacctggtcgaccagcacgtggaggagctggcggcgctggacacggtgg 400 |||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 385 acaagttcgcggacctggtggagcagcacgtggaggagctggcggcgctggacacggtgg 444 Query: 401 acgccggcaagctgttccagatgggcaagctggtggacatccccggaggcgccaacctgc 460 ||||||||||||||||| |||||| ||||| || ||||||||||| ||||| ||||||| Sbjct: 445 acgccggcaagctgttcgcgatggggaagctcgtcgacatccccggcggcgcgaacctgc 504 Query: 461 tccggtactacgccggtgccgccgacaagatccacggcgagacgctcaagatggcgcggc 520 |||||||||||||||| || || |||||| | |||||||||||||||||||||||||||| Sbjct: 505 tccggtactacgccggcgcggcggacaaggtgcacggcgagacgctcaagatggcgcggc 564
>dbj|AK105638.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-E03, full insert sequence Length = 1729 Score = 492 bits (248), Expect = e-136 Identities = 377/420 (89%) Strand = Plus / Plus Query: 101 aggggtttgaggtgccggaactggacatcaagttcaccaagctcttcatcaatggccagt 160 ||||||| ||||||||| | ||||| ||||||||||||||||||||||||||||||| | Sbjct: 100 aggggttcgaggtgccgaagctggagatcaagttcaccaagctcttcatcaatggccgct 159 Query: 161 tcgtcgacgcagcttcaggcaagacgttcgagacccgggacccacgcaccggcgaggtga 220 |||||||||| | || |||||||| ||||| ||||| ||||| |||||||||||||| | Sbjct: 160 tcgtcgacgccgtctccggcaagacattcgaaacccgtgacccgcgcaccggcgaggtca 219 Query: 221 tcgccaggatcgccgagggagacaaggccgacatcgacctcgccgtgaaggccgcccgcg 280 |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| | | Sbjct: 220 tcgccaagatcgccgaaggagacaaggccgacatcgacctcgccgtgaaggccgccaggg 279 Query: 281 cggccttcgacaacggcccctggcccagaatgcccggctgcgcaagggcaaggatcctgc 340 |||||||||| | ||||||||||| |||||| |||||| || |||| ||||||||||| Sbjct: 280 aggccttcgaccatggcccctggccaagaatgtccggctttgcgaggggaaggatcctgc 339 Query: 341 acaagttcgccgacctggtcgaccagcacgtggaggagctggcggcgctggacacggtgg 400 |||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 340 acaagttcgcggacctggtggagcagcacgtggaggagctggcggcgctggacacggtgg 399 Query: 401 acgccggcaagctgttccagatgggcaagctggtggacatccccggaggcgccaacctgc 460 ||||||||||||||||| |||||| ||||| || ||||||||||| ||||| ||||||| Sbjct: 400 acgccggcaagctgttcgcgatggggaagctcgtcgacatccccggcggcgcgaacctgc 459 Query: 461 tccggtactacgccggtgccgccgacaagatccacggcgagacgctcaagatggcgcggc 520 |||||||||||||||| || || |||||| | |||||||||||||||||||||||||||| Sbjct: 460 tccggtactacgccggcgcggcggacaaggtgcacggcgagacgctcaagatggcgcggc 519
>dbj|AB037421.1| Oryza sativa (japonica cultivar-group) ALDH1a mRNA for cytosolic aldehyde dehydrogenase, complete cds Length = 1751 Score = 492 bits (248), Expect = e-136 Identities = 377/420 (89%) Strand = Plus / Plus Query: 101 aggggtttgaggtgccggaactggacatcaagttcaccaagctcttcatcaatggccagt 160 ||||||| ||||||||| | ||||| ||||||||||||||||||||||||||||||| | Sbjct: 91 aggggttcgaggtgccgaagctggagatcaagttcaccaagctcttcatcaatggccgct 150 Query: 161 tcgtcgacgcagcttcaggcaagacgttcgagacccgggacccacgcaccggcgaggtga 220 |||||||||| | || |||||||| ||||| ||||| ||||| |||||||||||||| | Sbjct: 151 tcgtcgacgccgtctccggcaagacattcgaaacccgtgacccgcgcaccggcgaggtca 210 Query: 221 tcgccaggatcgccgagggagacaaggccgacatcgacctcgccgtgaaggccgcccgcg 280 |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| | | Sbjct: 211 tcgccaagatcgccgaaggagacaaggccgacatcgacctcgccgtgaaggccgccaggg 270 Query: 281 cggccttcgacaacggcccctggcccagaatgcccggctgcgcaagggcaaggatcctgc 340 |||||||||| | ||||||||||| |||||| |||||| || |||| ||||||||||| Sbjct: 271 aggccttcgaccatggcccctggccaagaatgtccggctttgcgaggggaaggatcctgc 330 Query: 341 acaagttcgccgacctggtcgaccagcacgtggaggagctggcggcgctggacacggtgg 400 |||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 331 acaagttcgcggacctggtggagcagcacgtggaggagctggcggcgctggacacggtgg 390 Query: 401 acgccggcaagctgttccagatgggcaagctggtggacatccccggaggcgccaacctgc 460 ||||||||||||||||| |||||| ||||| || ||||||||||| ||||| ||||||| Sbjct: 391 acgccggcaagctgttcgcgatggggaagctcgtcgacatccccggcggcgcgaacctgc 450 Query: 461 tccggtactacgccggtgccgccgacaagatccacggcgagacgctcaagatggcgcggc 520 |||||||||||||||| || || |||||| | |||||||||||||||||||||||||||| Sbjct: 451 tccggtactacgccggcgcggcggacaaggtgcacggcgagacgctcaagatggcgcggc 510
>gb|AF348413.1| Zea mays cytosolic aldehyde dehydrogenase RF2C (rf2c) mRNA, complete cds Length = 1757 Score = 353 bits (178), Expect = 4e-94 Identities = 334/386 (86%) Strand = Plus / Plus Query: 132 gttcaccaagctcttcatcaatggccagttcgtcgacgcagcttcaggcaagacgttcga 191 ||||||||||||||||||| | ||| ||||||||||||| | || |||||||||||||| Sbjct: 120 gttcaccaagctcttcatcgacggcaagttcgtcgacgccgtctccggcaagacgttcga 179 Query: 192 gacccgggacccacgcaccggcgaggtgatcgccaggatcgccgagggagacaaggccga 251 |||||||||||| ||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 180 gacccgggaccctcgcaccggcgaggtgatcgccagcatcgcggagggaggcaaggccga 239 Query: 252 catcgacctcgccgtgaaggccgcccgcgcggccttcgacaacggcccctggcccagaat 311 | ||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||| || Sbjct: 240 cgtcgacctcgccgtcaaggccgcccgggaggccttcgacaacgggccctggcccaggat 299 Query: 312 gcccggctgcgcaagggcaaggatcctgcacaagttcgccgacctggtcgaccagcacgt 371 | | || | || | | ||||||| |||| |||||| |||||| ||||| ||||||| Sbjct: 300 gacgggatacgagcgtggtcggatcctccacaggttcgcggacctgatcgacgagcacgt 359 Query: 372 ggaggagctggcggcgctggacacggtggacgccggcaagctgttccagatgggcaagct 431 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 360 ggaggagctggcggcgctggacacggtggacgccggcaagctgttcgccgtgggcaaggc 419 Query: 432 ggtggacatccccggaggcgccaacctgctccggtactacgccggtgccgccgacaagat 491 | ||||||||| || | ||| ||||||| || ||||||||||| |||||||||||| | Sbjct: 420 gcgggacatcccgggcgccgcgcacctgctgcgctactacgccggcgccgccgacaaggt 479 Query: 492 ccacggcgagacgctcaagatggcgc 517 ||||||| ||||||||||||||||| Sbjct: 480 gcacggcgcgacgctcaagatggcgc 505
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 262 bits (132), Expect = 1e-66 Identities = 180/196 (91%) Strand = Plus / Plus Query: 325 agggcaaggatcctgcacaagttcgccgacctggtcgaccagcacgtggaggagctggcg 384 |||| ||||||||||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 23100249 aggggaaggatcctgcacaagttcgcggacctggtggagcagcacgtggaggagctggcg 23100308 Query: 385 gcgctggacacggtggacgccggcaagctgttccagatgggcaagctggtggacatcccc 444 ||||||||||||||||||||||||||||||||| |||||| ||||| || ||||||||| Sbjct: 23100309 gcgctggacacggtggacgccggcaagctgttcgcgatggggaagctcgtcgacatcccc 23100368 Query: 445 ggaggcgccaacctgctccggtactacgccggtgccgccgacaagatccacggcgagacg 504 || ||||| ||||||||||||||||||||||| || || |||||| | |||||||||||| Sbjct: 23100369 ggcggcgcgaacctgctccggtactacgccggcgcggcggacaaggtgcacggcgagacg 23100428 Query: 505 ctcaagatggcgcggc 520 |||||||||||||||| Sbjct: 23100429 ctcaagatggcgcggc 23100444 Score = 174 bits (88), Expect = 2e-40 Identities = 130/144 (90%) Strand = Plus / Plus Query: 176 caggcaagacgttcgagacccgggacccacgcaccggcgaggtgatcgccaggatcgccg 235 |||||||||| ||||| ||||| ||||| |||||||||||||| ||||||| |||||||| Sbjct: 23099939 caggcaagacattcgaaacccgtgacccgcgcaccggcgaggtcatcgccaagatcgccg 23099998 Query: 236 agggagacaaggccgacatcgacctcgccgtgaaggccgcccgcgcggccttcgacaacg 295 | ||||||||||||||||||||||||||||||||||||||| | | |||||||||| | | Sbjct: 23099999 aaggagacaaggccgacatcgacctcgccgtgaaggccgccagggaggccttcgaccatg 23100058 Query: 296 gcccctggcccagaatgcccggct 319 |||||||||| |||||| |||||| Sbjct: 23100059 gcccctggccaagaatgtccggct 23100082 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 101 aggggtttgaggtgccggaactggacatcaagttcaccaagctcttcatcaatggccagt 160 ||||||| ||||||||| | ||||| ||||||||||||||||||||||||||||||| | Sbjct: 23093547 aggggttcgaggtgccgaagctggagatcaagttcaccaagctcttcatcaatggccgct 23093606 Query: 161 tcgtcgacgc 170 |||||||||| Sbjct: 23093607 tcgtcgacgc 23093616 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 127 atcaagttcaccaagctcttcatcaatggccagttcgtcgacgc 170 |||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 23109989 atcaagttcaccaagctcttcatcaacggcgagttcgtcgacgc 23110032 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 463 cggtactacgccggtgccgccgacaagatccacggcgag 501 |||||||||||||| || ||||||||||||||||||||| Sbjct: 23113767 cggtactacgccggcgcggccgacaagatccacggcgag 23113805 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 349 gccgacctggtcgaccagcacgtggaggagctggcggcgctggac 393 ||||||||||| || ||||||| || |||||||||||||||||| Sbjct: 23113653 gccgacctggtggagcagcacgccgacgagctggcggcgctggac 23113697 Score = 40.1 bits (20), Expect = 7.0 Identities = 80/100 (80%) Strand = Plus / Plus Query: 176 caggcaagacgttcgagacccgggacccacgcaccggcgaggtgatcgccaggatcgccg 235 |||||||||| ||| |||| |||||||||| || ||||| || | ||| ||||| | Sbjct: 23113360 caggcaagacattcaagacaagggacccacgaacaggcgatgtcctggcccacatcgcag 23113419 Query: 236 agggagacaaggccgacatcgacctcgccgtgaaggccgc 275 ||| ||||||||| || | ||||||||||| |||||||| Sbjct: 23113420 aggcagacaaggctgatgtggacctcgccgtcaaggccgc 23113459
>dbj|AP003048.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710A02 Length = 157201 Score = 262 bits (132), Expect = 1e-66 Identities = 180/196 (91%) Strand = Plus / Plus Query: 325 agggcaaggatcctgcacaagttcgccgacctggtcgaccagcacgtggaggagctggcg 384 |||| ||||||||||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 32408 aggggaaggatcctgcacaagttcgcggacctggtggagcagcacgtggaggagctggcg 32467 Query: 385 gcgctggacacggtggacgccggcaagctgttccagatgggcaagctggtggacatcccc 444 ||||||||||||||||||||||||||||||||| |||||| ||||| || ||||||||| Sbjct: 32468 gcgctggacacggtggacgccggcaagctgttcgcgatggggaagctcgtcgacatcccc 32527 Query: 445 ggaggcgccaacctgctccggtactacgccggtgccgccgacaagatccacggcgagacg 504 || ||||| ||||||||||||||||||||||| || || |||||| | |||||||||||| Sbjct: 32528 ggcggcgcgaacctgctccggtactacgccggcgcggcggacaaggtgcacggcgagacg 32587 Query: 505 ctcaagatggcgcggc 520 |||||||||||||||| Sbjct: 32588 ctcaagatggcgcggc 32603 Score = 174 bits (88), Expect = 2e-40 Identities = 130/144 (90%) Strand = Plus / Plus Query: 176 caggcaagacgttcgagacccgggacccacgcaccggcgaggtgatcgccaggatcgccg 235 |||||||||| ||||| ||||| ||||| |||||||||||||| ||||||| |||||||| Sbjct: 32098 caggcaagacattcgaaacccgtgacccgcgcaccggcgaggtcatcgccaagatcgccg 32157 Query: 236 agggagacaaggccgacatcgacctcgccgtgaaggccgcccgcgcggccttcgacaacg 295 | ||||||||||||||||||||||||||||||||||||||| | | |||||||||| | | Sbjct: 32158 aaggagacaaggccgacatcgacctcgccgtgaaggccgccagggaggccttcgaccatg 32217 Query: 296 gcccctggcccagaatgcccggct 319 |||||||||| |||||| |||||| Sbjct: 32218 gcccctggccaagaatgtccggct 32241 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 101 aggggtttgaggtgccggaactggacatcaagttcaccaagctcttcatcaatggccagt 160 ||||||| ||||||||| | ||||| ||||||||||||||||||||||||||||||| | Sbjct: 25706 aggggttcgaggtgccgaagctggagatcaagttcaccaagctcttcatcaatggccgct 25765 Query: 161 tcgtcgacgc 170 |||||||||| Sbjct: 25766 tcgtcgacgc 25775 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 127 atcaagttcaccaagctcttcatcaatggccagttcgtcgacgc 170 |||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 42148 atcaagttcaccaagctcttcatcaacggcgagttcgtcgacgc 42191 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 463 cggtactacgccggtgccgccgacaagatccacggcgag 501 |||||||||||||| || ||||||||||||||||||||| Sbjct: 45926 cggtactacgccggcgcggccgacaagatccacggcgag 45964 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 349 gccgacctggtcgaccagcacgtggaggagctggcggcgctggac 393 ||||||||||| || ||||||| || |||||||||||||||||| Sbjct: 45812 gccgacctggtggagcagcacgccgacgagctggcggcgctggac 45856 Score = 40.1 bits (20), Expect = 7.0 Identities = 80/100 (80%) Strand = Plus / Plus Query: 176 caggcaagacgttcgagacccgggacccacgcaccggcgaggtgatcgccaggatcgccg 235 |||||||||| ||| |||| |||||||||| || ||||| || | ||| ||||| | Sbjct: 45519 caggcaagacattcaagacaagggacccacgaacaggcgatgtcctggcccacatcgcag 45578 Query: 236 agggagacaaggccgacatcgacctcgccgtgaaggccgc 275 ||| ||||||||| || | ||||||||||| |||||||| Sbjct: 45579 aggcagacaaggctgatgtggacctcgccgtcaaggccgc 45618
>gb|AF348412.2| Zea mays cytosolic aldehyde dehydrogenase RF2C (rf2c) gene, complete cds Length = 7257 Score = 192 bits (97), Expect = 8e-46 Identities = 124/133 (93%) Strand = Plus / Plus Query: 176 caggcaagacgttcgagacccgggacccacgcaccggcgaggtgatcgccaggatcgccg 235 |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| | Sbjct: 2792 caggcaagacgttcgagacccgggaccctcgcaccggcgaggtgatcgccagcatcgcgg 2851 Query: 236 agggagacaaggccgacatcgacctcgccgtgaaggccgcccgcgcggccttcgacaacg 295 |||||| |||||||||| ||||||||||||| ||||||||||| | |||||||||||||| Sbjct: 2852 agggaggcaaggccgacgtcgacctcgccgtcaaggccgcccgggaggccttcgacaacg 2911 Query: 296 gcccctggcccag 308 | ||||||||||| Sbjct: 2912 ggccctggcccag 2924 Score = 178 bits (90), Expect = 1e-41 Identities = 162/186 (87%) Strand = Plus / Plus Query: 332 ggatcctgcacaagttcgccgacctggtcgaccagcacgtggaggagctggcggcgctgg 391 ||||||| |||| |||||| |||||| ||||| ||||||||||||||||||||||||||| Sbjct: 3018 ggatcctccacaggttcgcggacctgatcgacgagcacgtggaggagctggcggcgctgg 3077 Query: 392 acacggtggacgccggcaagctgttccagatgggcaagctggtggacatccccggaggcg 451 |||||||||||||||||||||||||| |||||||| | ||||||||| || | || Sbjct: 3078 acacggtggacgccggcaagctgttcgccgtgggcaaggcgcgggacatcccgggcgccg 3137 Query: 452 ccaacctgctccggtactacgccggtgccgccgacaagatccacggcgagacgctcaaga 511 | ||||||| || ||||||||||| |||||||||||| | ||||||| ||||||||||| Sbjct: 3138 cgcacctgctgcgctactacgccggcgccgccgacaaggtgcacggcgcgacgctcaaga 3197 Query: 512 tggcgc 517 |||||| Sbjct: 3198 tggcgc 3203 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 132 gttcaccaagctcttcatcaatggccagttcgtcgacgc 170 ||||||||||||||||||| | ||| ||||||||||||| Sbjct: 1144 gttcaccaagctcttcatcgacggcaagttcgtcgacgc 1182
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 105 bits (53), Expect = 1e-19 Identities = 56/57 (98%) Strand = Plus / Minus Query: 123 ggacatcaagttcaccaagctcttcatcaatggccagttcgtcgacgcagcttcagg 179 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 61174 ggacatcaagttcaccaagctcttcatcaatgggcagttcgtcgacgcagcttcagg 61118
>gb|AF348415.2| Zea mays cytosolic aldehyde dehydrogenase RF2D (rf2d) mRNA, complete cds Length = 1901 Score = 105 bits (53), Expect = 1e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 127 atcaagttcaccaagctcttcatcaatggccagttcgtcgacgcagcttcaggcaagacg 186 |||||||||||||||||||||||||| ||| ||||||||||||| || || |||||||| Sbjct: 192 atcaagttcaccaagctcttcatcaacggcgagttcgtcgacgccgcctccggcaagaca 251 Query: 187 ttcgagacccgggacccacgcaccggcga 215 ||||| ||| |||||||||| |||||||| Sbjct: 252 ttcgataccagggacccacggaccggcga 280 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 352 gacctggtcgaccagcacgtggaggagctggcggcgctggacacggtggacgccggcaag 411 |||||||| || |||||| |||||||||||||||||||||| | |||||||| ||| Sbjct: 417 gacctggtggagcagcacacggaggagctggcggcgctggacggtgccgacgccgggaag 476 Query: 412 ctgttccagatgggcaagctggtggacatccccggaggcgccaacctgctccggtactac 471 ||| | | | |||||||| | | |||||||||| | | | | |||| || |||||| Sbjct: 477 ctgctgctgctgggcaagatcatcgacatccccgcggccacgcagatgctgcgctactac 536 Query: 472 gccggtgccgccgacaagatccacggcga 500 ||||| ||||||||||||||||||||||| Sbjct: 537 gccggcgccgccgacaagatccacggcga 565
>ref|NM_192584.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1524 Score = 97.6 bits (49), Expect = 3e-17 Identities = 124/149 (83%) Strand = Plus / Plus Query: 127 atcaagttcaccaagctcttcatcaatggccagttcgtcgacgcagcttcaggcaagacg 186 |||||||||||||||||||||||||| ||| ||||||||||||| || || |||||||| Sbjct: 70 atcaagttcaccaagctcttcatcaacggcgagttcgtcgacgccgcctcgggcaagaca 129 Query: 187 ttcgagacccgggacccacgcaccggcgaggtgatcgccaggatcgccgagggagacaag 246 ||| |||| |||||||||| || ||||| || | ||| ||||| |||| ||||||| Sbjct: 130 ttcaagacaagggacccacgaacaggcgatgtcctggcccacatcgcagaggcagacaag 189 Query: 247 gccgacatcgacctcgccgtgaaggccgc 275 || || | ||||||||||| |||||||| Sbjct: 190 gctgatgtggacctcgccgtcaaggccgc 218 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 463 cggtactacgccggtgccgccgacaagatccacggcgag 501 |||||||||||||| || ||||||||||||||||||||| Sbjct: 406 cggtactacgccggcgcggccgacaagatccacggcgag 444 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 349 gccgacctggtcgaccagcacgtggaggagctggcggcgctggac 393 ||||||||||| || ||||||| || |||||||||||||||||| Sbjct: 292 gccgacctggtggagcagcacgccgacgagctggcggcgctggac 336
>dbj|AK101427.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038G01, full insert sequence Length = 1961 Score = 97.6 bits (49), Expect = 3e-17 Identities = 124/149 (83%) Strand = Plus / Plus Query: 127 atcaagttcaccaagctcttcatcaatggccagttcgtcgacgcagcttcaggcaagacg 186 |||||||||||||||||||||||||| ||| ||||||||||||| || || |||||||| Sbjct: 233 atcaagttcaccaagctcttcatcaacggcgagttcgtcgacgccgcctcgggcaagaca 292 Query: 187 ttcgagacccgggacccacgcaccggcgaggtgatcgccaggatcgccgagggagacaag 246 ||| |||| |||||||||| || ||||| || | ||| ||||| |||| ||||||| Sbjct: 293 ttcaagacaagggacccacgaacaggcgatgtcctggcccacatcgcagaggcagacaag 352 Query: 247 gccgacatcgacctcgccgtgaaggccgc 275 || || | ||||||||||| |||||||| Sbjct: 353 gctgatgtggacctcgccgtcaaggccgc 381 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 463 cggtactacgccggtgccgccgacaagatccacggcgag 501 |||||||||||||| || ||||||||||||||||||||| Sbjct: 569 cggtactacgccggcgcggccgacaagatccacggcgag 607 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 349 gccgacctggtcgaccagcacgtggaggagctggcggcgctggac 393 ||||||||||| || ||||||| || |||||||||||||||||| Sbjct: 455 gccgacctggtggagcagcacgccgacgagctggcggcgctggac 499
>gb|AF348417.1| Zea mays mitochondrial aldehyde dehydrogenase RF2B (rf2b) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1881 Score = 93.7 bits (47), Expect = 5e-16 Identities = 140/171 (81%) Strand = Plus / Plus Query: 135 caccaagctcttcatcaatggccagttcgtcgacgcagcttcaggcaagacgttcgagac 194 |||| ||||| ||||||||||| | ||||||||||| ||||| || ||||||||| ||| Sbjct: 314 cacccagctcctcatcaatggcaacttcgtcgacgctgcttctgggaagacgttcccgac 373 Query: 195 ccgggacccacgcaccggcgaggtgatcgccaggatcgccgagggagacaaggccgacat 254 | |||||| |||||||||||||| ||||| | |||||||||| |||| | ||||| Sbjct: 374 gctggacccgcgcaccggcgaggtcatcgcgcgcgtcgccgagggcgacagcgaggacat 433 Query: 255 cgacctcgccgtgaaggccgcccgcgcggccttcgacaacggcccctggcc 305 ||||| ||||||| ||||||||| |||||||||| | ||||| ||||| Sbjct: 434 cgaccgcgccgtggccgccgcccgcagggccttcgacgagggcccgtggcc 484
>gb|BT023973.1| Zea mays clone EL01N0402A02 mRNA sequence Length = 1921 Score = 89.7 bits (45), Expect = 8e-15 Identities = 129/157 (82%) Strand = Plus / Plus Query: 135 caccaagctcttcatcaatggccagttcgtcgacgcagcttcaggcaagacgttcgagac 194 |||| ||||| ||||||||||| | ||||||||||| ||||| || ||||||||| ||| Sbjct: 369 cacccagctcctcatcaatggcaacttcgtcgacgctgcttctgggaagacgttcccgac 428 Query: 195 ccgggacccacgcaccggcgaggtgatcgccaggatcgccgagggagacaaggccgacat 254 | |||||| |||||||||||||| ||||| | |||||||||| |||| | ||||| Sbjct: 429 gctggacccgcgcaccggcgaggtcatcgcgcgcgtcgccgagggcgacagcgaggacat 488 Query: 255 cgacctcgccgtgaaggccgcccgcgcggccttcgac 291 ||||| ||||||| ||||||||| |||||||||| Sbjct: 489 cgaccgcgccgtggccgccgcccgcagggccttcgac 525
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 81.8 bits (41), Expect = 2e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 176 caggcaagacgttcgagacccgggacccacgcaccggcgaggtgatcgccaggatcgccg 235 |||| ||||||||||||||| ||||||| ||||||||||| ||||||||| | |||||| Sbjct: 22906007 caggtaagacgttcgagaccagggacccccgcaccggcgacgtgatcgcccgcgtcgccg 22906066 Query: 236 agggagacaaggccgacatcgacctcgccgtgaaggc 272 | || ||||||| ||| ||||||| || |||||||| Sbjct: 22906067 aaggcgacaaggaggacgtcgacctggcggtgaaggc 22906103 Score = 79.8 bits (40), Expect = 8e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 466 tactacgccggtgccgccgacaagatccacggcgagacgctcaagatg 513 |||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 22906379 tacttcgccggcgccgccgacaagatccacggcgagacgctcaagatg 22906426 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 72 gacgtcgatggcggcagcgaacggcggc 99 |||||||||| |||| |||||||||||| Sbjct: 15159462 gacgtcgatgtcggcggcgaacggcggc 15159435
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502H06 Length = 165630 Score = 81.8 bits (41), Expect = 2e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 176 caggcaagacgttcgagacccgggacccacgcaccggcgaggtgatcgccaggatcgccg 235 |||| ||||||||||||||| ||||||| ||||||||||| ||||||||| | |||||| Sbjct: 80829 caggtaagacgttcgagaccagggacccccgcaccggcgacgtgatcgcccgcgtcgccg 80888 Query: 236 agggagacaaggccgacatcgacctcgccgtgaaggc 272 | || ||||||| ||| ||||||| || |||||||| Sbjct: 80889 aaggcgacaaggaggacgtcgacctggcggtgaaggc 80925 Score = 79.8 bits (40), Expect = 8e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 466 tactacgccggtgccgccgacaagatccacggcgagacgctcaagatg 513 |||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 81201 tacttcgccggcgccgccgacaagatccacggcgagacgctcaagatg 81248
>dbj|AB084897.1| Sorghum bicolor ALDH2a mRNA for mitochondrial aldehyde dehydrogenase, complete cds Length = 1862 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Plus Query: 135 caccaagctcttcatcaatggccagttcgtcgacgcagcttcaggcaagacgttcgagac 194 |||| ||||| ||||||||||| | ||||| ||||| ||||| || ||||||||| ||| Sbjct: 325 cacccagctcctcatcaatggcaacttcgttgacgccgcttctgggaagacgttcccgac 384 Query: 195 ccgggacccacgcaccggcgaggtgatcgccaggatcgccgagggagacaaggccgacat 254 | |||||| |||||||||||||| ||||| | |||||||||| |||| | ||||| Sbjct: 385 gctggacccccgcaccggcgaggtcatcgcgcgcgtcgccgagggcgacagcgaggacat 444 Query: 255 cgacctcgccgtgaaggccgcccgcgcggccttcgacaacggcccctggcc 305 ||||| |||||| ||||||||| |||||||||| | ||||| ||||| Sbjct: 445 cgaccgcgccgtcgccgccgcccgcagggccttcgacgagggcccgtggcc 495
>gb|AY023731.1| Oryza sativa microsatellite MRG6056 containing (AATT)X6, closest to marker R3072, genomic sequence Length = 224 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 127 atcaagttcaccaagctcttcatcaatggccagttcgtcgacgc 170 |||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 216 atcaagttcaccaagctcttcatcaacggcgagttcgtcgacgc 173
>gb|AF348414.3| Zea mays cytosolic aldehyde dehydrogenase RF2D (rf2d) gene, partial cds Length = 7415 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 352 gacctggtcgaccagcacgtggaggagctggcggcgctggacacggtggacgccggcaag 411 |||||||| || |||||| |||||||||||||||||||||| | |||||||| ||| Sbjct: 5304 gacctggtggagcagcacacggaggagctggcggcgctggacggtgccgacgccgggaag 5363 Query: 412 ctgttccagatgggcaagctggtggacatccccggaggcgccaacctgctccggtactac 471 ||| | | | |||||||| | | |||||||||| | | | | |||| || |||||| Sbjct: 5364 ctgctgctgctgggcaagatcatcgacatccccgcggccacgcagatgctgcgctactac 5423 Query: 472 gccggtgccgccgacaagatccacggcga 500 ||||| ||||||||||||||||||||||| Sbjct: 5424 gccggcgccgccgacaagatccacggcga 5452
>ref|NM_113359.2| Arabidopsis thaliana ALDH2C4 (REDUCED EPIDERMAL FLUORESCENCE1); aldehyde dehydrogenase/ oxidoreductase AT3G24503 (ALDH2C4) mRNA, complete cds Length = 1716 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 127 atcaagttcaccaagctcttcatcaatggccagttcgtcgacgcagcttcaggcaagacg 186 ||||| ||||||||||| |||||||| ||||||||| | || || |||||||| |||||| Sbjct: 87 atcaaattcaccaagcttttcatcaacggccagttcattgatgctgcttcagggaagacg 146 Query: 187 ttcgagac 194 || ||||| Sbjct: 147 tttgagac 154
>gb|AF349448.1| Arabidopsis thaliana aldehyde dehydrogenase AtALDH1a mRNA, complete cds Length = 1614 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 127 atcaagttcaccaagctcttcatcaatggccagttcgtcgacgcagcttcaggcaagacg 186 ||||| ||||||||||| |||||||| ||||||||| | || || |||||||| |||||| Sbjct: 81 atcaaattcaccaagcttttcatcaacggccagttcattgatgctgcttcagggaagacg 140 Query: 187 ttcgagac 194 || ||||| Sbjct: 141 tttgagac 148
>gb|AY056398.1| Arabidopsis thaliana aldehyde dehydrogenase mRNA, complete cds Length = 1709 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 127 atcaagttcaccaagctcttcatcaatggccagttcgtcgacgcagcttcaggcaagacg 186 ||||| ||||||||||| |||||||| ||||||||| | || || |||||||| |||||| Sbjct: 87 atcaaattcaccaagcttttcatcaacggccagttcattgatgctgcttcagggaagacg 146 Query: 187 ttcgagac 194 || ||||| Sbjct: 147 tttgagac 154
>emb|BX825724.1|CNS0A6CJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL58ZG10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1645 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 127 atcaagttcaccaagctcttcatcaatggccagttcgtcgacgcagcttcaggcaagacg 186 ||||| ||||||||||| |||||||| ||||||||| | || || |||||||| |||||| Sbjct: 70 atcaaattcaccaagcttttcatcaacggccagttcattgatgctgcttcagggaagacg 129 Query: 187 ttcgagac 194 || ||||| Sbjct: 130 tttgagac 137
>ref|XM_467608.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2896 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 130 aagttcaccaagctcttcatcaatggccagttcgtcgacgcagcttcaggcaagacgttc 189 |||| |||||||||| ||||||||||| | |||||||| ||||| || || ||||||||| Sbjct: 391 aagtacaccaagctcctcatcaatggcaacttcgtcgatgcagcatctgggaagacgttc 450 Query: 190 gagacccgggacccacgcaccggcga 215 | ||| ||| || ||||||||||| Sbjct: 451 gcgacggtggatccccgcaccggcga 476
>ref|XM_467607.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1995 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 130 aagttcaccaagctcttcatcaatggccagttcgtcgacgcagcttcaggcaagacgttc 189 |||| |||||||||| ||||||||||| | |||||||| ||||| || || ||||||||| Sbjct: 311 aagtacaccaagctcctcatcaatggcaacttcgtcgatgcagcatctgggaagacgttc 370 Query: 190 gagacccgggacccacgcaccggcga 215 | ||| ||| || ||||||||||| Sbjct: 371 gcgacggtggatccccgcaccggcga 396
>gb|AF348418.2| Zea mays mitochondrial aldehyde dehydrogenase RF2B (rf2b) gene, complete cds; nuclear gene for mitochondrial product Length = 4311 Score = 60.0 bits (30), Expect = 8e-06 Identities = 105/130 (80%) Strand = Plus / Plus Query: 176 caggcaagacgttcgagacccgggacccacgcaccggcgaggtgatcgccaggatcgccg 235 |||| ||||||||| ||| | |||||| |||||||||||||| ||||| | |||||| Sbjct: 1966 cagggaagacgttcccgacgctggacccgcgcaccggcgaggtcatcgcgcgcgtcgccg 2025 Query: 236 agggagacaaggccgacatcgacctcgccgtgaaggccgcccgcgcggccttcgacaacg 295 |||| |||| | |||||||||| ||||||| ||||||||| |||||||||| | | Sbjct: 2026 agggcgacagcgaggacatcgaccgcgccgtggccgccgcccgcagggccttcgacgagg 2085 Query: 296 gcccctggcc 305 |||| ||||| Sbjct: 2086 gcccgtggcc 2095 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 135 caccaagctcttcatcaatggccagttcgtcgacgcagcttc 176 |||| ||||| ||||||||||| | ||||||||||| ||||| Sbjct: 1833 cacccagctcctcatcaatggcaacttcgtcgacgctgcttc 1874
>dbj|AK121610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042M19, full insert sequence Length = 1996 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 130 aagttcaccaagctcttcatcaatggccagttcgtcgacgcagcttcaggcaagacgttc 189 |||| |||||||||| ||||||||||| | |||||||| ||||| || || ||||||||| Sbjct: 312 aagtacaccaagctcctcatcaatggcaacttcgtcgatgcagcatctgggaagacgttc 371 Query: 190 gagacccgggacccacgcaccggcga 215 | ||| ||| || ||||||||||| Sbjct: 372 gcgacggtggatccccgcaccggcga 397
>dbj|AK119320.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-H10, full insert sequence Length = 2896 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 130 aagttcaccaagctcttcatcaatggccagttcgtcgacgcagcttcaggcaagacgttc 189 |||| |||||||||| ||||||||||| | |||||||| ||||| || || ||||||||| Sbjct: 391 aagtacaccaagctcctcatcaatggcaacttcgtcgatgcagcatctgggaagacgttc 450 Query: 190 gagacccgggacccacgcaccggcga 215 | ||| ||| || ||||||||||| Sbjct: 451 gcgacggtggatccccgcaccggcga 476
>dbj|AB030939.1| Oryza sativa (japonica cultivar-group) mRNA for mitochondrial aldehyde dehydrogenase ALDH2a, complete cds Length = 1855 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 130 aagttcaccaagctcttcatcaatggccagttcgtcgacgcagcttcaggcaagacgttc 189 |||| |||||||||| ||||||||||| | |||||||| ||||| || || ||||||||| Sbjct: 222 aagtacaccaagctcctcatcaatggcaacttcgtcgatgcagcatctgggaagacgttc 281 Query: 190 gagacccgggacccacgcaccggcga 215 | ||| ||| || ||||||||||| Sbjct: 282 gcgacggtggatccccgcaccggcga 307
>ref|XM_382336.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02160.1) partial mRNA Length = 1488 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 461 tccggtactacgccggtgccgccgacaagatc 492 |||| ||||||||||||||||||||||||||| Sbjct: 374 tccgctactacgccggtgccgccgacaagatc 405
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 274 gcccgcgcggccttcgacaacggcccctggcc 305 |||||||||||||||||||||||||| ||||| Sbjct: 4068703 gcccgcgcggccttcgacaacggcccgtggcc 4068672 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 372 ggaggagctggcggcgctgga 392 ||||||||||||||||||||| Sbjct: 3084729 ggaggagctggcggcgctgga 3084749
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 245 aggccgacatcgacctcgccgtgaaggccgcccgcgcggccttcga 290 |||| ||| |||||| ||||||||||||||||||| ||||||||| Sbjct: 269063 aggcggacgtcgaccgcgccgtgaaggccgcccgcaaggccttcga 269018
>gb|AY550122.1| Saussurea medusa cytosolic aldehyde dehydrogenase mRNA, complete cds Length = 1664 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 127 atcaagttcaccaagctcttcatcaatgg 155 ||||||||||||||||| ||||||||||| Sbjct: 92 atcaagttcaccaagcttttcatcaatgg 120
>dbj|AB020746.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MOB24 Length = 79706 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 127 atcaagttcaccaagctcttcatcaatggccagttcgtcgacgcagcttcagg 179 ||||| ||||||||||| |||||||| ||||||||| | || || |||||||| Sbjct: 14357 atcaaattcaccaagcttttcatcaacggccagttcattgatgctgcttcagg 14305
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Minus Query: 130 aagttcaccaagctcttcatcaatggccagttcgtcgacgcagc 173 |||| |||||||||| ||||||||||| | |||||||| ||||| Sbjct: 30414050 aagtacaccaagctcctcatcaatggcaacttcgtcgatgcagc 30414007
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Minus Query: 130 aagttcaccaagctcttcatcaatggccagttcgtcgacgcagc 173 |||| |||||||||| ||||||||||| | |||||||| ||||| Sbjct: 94910 aagtacaccaagctcctcatcaatggcaacttcgtcgatgcagc 94867
>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0617A09 Length = 134804 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Minus Query: 130 aagttcaccaagctcttcatcaatggccagttcgtcgacgcagc 173 |||| |||||||||| ||||||||||| | |||||||| ||||| Sbjct: 20098 aagtacaccaagctcctcatcaatggcaacttcgtcgatgcagc 20055
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 280 gcggccttcgacaacggcccctggccc 306 ||||| ||||||||||||||||||||| Sbjct: 267710 gcggcgttcgacaacggcccctggccc 267684
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 252 catcgacctcgccgtgaaggccg 274 ||||||||||||||||||||||| Sbjct: 2183817 catcgacctcgccgtgaaggccg 2183839
>emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52), complete genome Length = 154746 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 379 ctggcggcgctggacacggtggacgcc 405 |||||||||||||||| |||||||||| Sbjct: 57357 ctggcggcgctggacatggtggacgcc 57331
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 280 gcggccttcgacaacggcccctggccc 306 ||||| ||||||||||||||||||||| Sbjct: 267596 gcggcgttcgacaacggcccctggccc 267570
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 280 gcggccttcgacaacggcccctggccc 306 ||||| ||||||||||||||||||||| Sbjct: 265920 gcggcgttcgacaacggcccctggccc 265894
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 465 gtactacgccggtgccgccgacaagatccacggcgagac 503 ||||||||| || ||||||||||| ||||||||||||| Sbjct: 4216312 gtactacgctggggccgccgacaaactccacggcgagac 4216274
>dbj|AB218904.1| Chimpanzee alpha-1 herpesvirus UL26, UL27, UL28, UL29 genes for virion maturation protein/protease, glycoprotein gB, DNA packaging, ssDNA binding protein, partial and complete cds Length = 6709 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 379 ctggcggcgctggacacggtggacgcc 405 |||||||||||||||| |||||||||| Sbjct: 4431 ctggcggcgctggacatggtggacgcc 4405
>dbj|AK107309.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-D05, full insert sequence Length = 1675 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 262 gccgtgaaggccgcccgcgcggccttcgaca 292 ||||| ||||||||||||| ||||||||||| Sbjct: 259 gccgtcaaggccgcccgcgaggccttcgaca 289
>gb|AD000006.1|MSGY140 Mycobacterium tuberculosis sequence from clone y140 Length = 40806 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 280 gcggccttcgacaacggcccctggccc 306 ||||| ||||||||||||||||||||| Sbjct: 29415 gcggcgttcgacaacggcccctggccc 29441
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 379 ctggcggcgctggacacggtggacgc 404 |||||||||||||||| ||||||||| Sbjct: 55821 ctggcggcgctggacatggtggacgc 55796
>ref|NM_187486.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 370 gtggaggagctggcggcgctgg 391 |||||||||||||||||||||| Sbjct: 109 gtggaggagctggcggcgctgg 130
>gb|AE009413.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 183 of 187 of the complete sequence Length = 11925 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 268 aaggccgcccgcgcggccttcg 289 |||||||||||||||||||||| Sbjct: 9472 aaggccgcccgcgcggccttcg 9493
>gb|AE008201.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 5 of 187 of the complete sequence Length = 10456 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 268 aaggccgcccgcgcggccttcg 289 |||||||||||||||||||||| Sbjct: 2317 aaggccgcccgcgcggccttcg 2296
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 gtggaggagctggcggcgctgg 391 |||||||||||||||||||||| Sbjct: 8919877 gtggaggagctggcggcgctgg 8919856 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 gtggaggagctggcggcgctgg 391 |||||||||||||||||||||| Sbjct: 8913303 gtggaggagctggcggcgctgg 8913282
>emb|AJ549290.1|CSA549290 Crocus sativus mRNA for aldehyde dehydrogenase (adh gene) Length = 1521 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 127 atcaagttcaccaagctcttcatcaa 152 ||||||||||||||||| |||||||| Sbjct: 67 atcaagttcaccaagcttttcatcaa 92
>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02, complete sequence Length = 126027 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 gtggaggagctggcggcgctgg 391 |||||||||||||||||||||| Sbjct: 110765 gtggaggagctggcggcgctgg 110744 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 gtggaggagctggcggcgctgg 391 |||||||||||||||||||||| Sbjct: 104191 gtggaggagctggcggcgctgg 104170
>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0071M09, complete sequence Length = 143595 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 gtggaggagctggcggcgctgg 391 |||||||||||||||||||||| Sbjct: 44738 gtggaggagctggcggcgctgg 44717 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 gtggaggagctggcggcgctgg 391 |||||||||||||||||||||| Sbjct: 38164 gtggaggagctggcggcgctgg 38143
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 gtggaggagctggcggcgctgg 391 |||||||||||||||||||||| Sbjct: 8917712 gtggaggagctggcggcgctgg 8917691 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 gtggaggagctggcggcgctgg 391 |||||||||||||||||||||| Sbjct: 8911138 gtggaggagctggcggcgctgg 8911117
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.45 Identities = 40/46 (86%) Strand = Plus / Plus Query: 245 aggccgacatcgacctcgccgtgaaggccgcccgcgcggccttcga 290 |||| ||| |||||| |||||||||||||||||| ||||||||| Sbjct: 4163904 aggcggacgtcgaccgggccgtgaaggccgcccgcaaggccttcga 4163949
>dbj|AK109304.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-E03, full insert sequence Length = 927 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 370 gtggaggagctggcggcgctgg 391 |||||||||||||||||||||| Sbjct: 170 gtggaggagctggcggcgctgg 191
>dbj|AK099430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013012E01, full insert sequence Length = 1051 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 370 gtggaggagctggcggcgctgg 391 |||||||||||||||||||||| Sbjct: 146 gtggaggagctggcggcgctgg 167
>dbj|AK098913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I11, full insert sequence Length = 937 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 370 gtggaggagctggcggcgctgg 391 |||||||||||||||||||||| Sbjct: 126 gtggaggagctggcggcgctgg 147
>dbj|AK062166.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-B08, full insert sequence Length = 1007 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 370 gtggaggagctggcggcgctgg 391 |||||||||||||||||||||| Sbjct: 193 gtggaggagctggcggcgctgg 214
>dbj|AP006370.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT03K19, TM0214, complete sequence Length = 95881 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 126 catcaagttcaccaagctcttcatcaatgg 155 ||||||||| || ||||||||||||||||| Sbjct: 12752 catcaagtttacaaagctcttcatcaatgg 12781
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcgccgacctggtcgaccagc 367 ||||||||||||||||||||| Sbjct: 2934470 tcgccgacctggtcgaccagc 2934450
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 140 agctcttcatcaatggccagttcgtcgac 168 |||||||||||||| ||||| |||||||| Sbjct: 3058922 agctcttcatcaatcgccagatcgtcgac 3058894
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 cgtgaaggccgcccgcgcggc 284 ||||||||||||||||||||| Sbjct: 4708659 cgtgaaggccgcccgcgcggc 4708639
>emb|BX640452.1| Bordetella bronchiseptica strain RB50, complete genome; segment 16/16 Length = 123385 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 gccgacatcgacctcgccgtgaaggccgc 275 ||||||||||||||||| ||| ||||||| Sbjct: 67382 gccgacatcgacctcgcggtgcaggccgc 67410
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 gccgacatcgacctcgccgtgaaggccgc 275 ||||||||||||||||| ||| ||||||| Sbjct: 203210 gccgacatcgacctcgcggtgcaggccgc 203238
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 252 catcgacctcgccgtgaaggccgcc 276 |||||||||||||| |||||||||| Sbjct: 128166 catcgacctcgccgagaaggccgcc 128142
>emb|AL445065.1|TACID3 Thermoplasma acidophilum complete genome; segment 3/5 Length = 316900 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 413 tgttccagatgggcaagctggtggacatc 441 ||||||||| |||||||||||||| |||| Sbjct: 184167 tgttccagaagggcaagctggtgggcatc 184195
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 cggcgaggtgatcgccaggatcgcc 234 |||||||||||| |||||||||||| Sbjct: 2570105 cggcgaggtgatggccaggatcgcc 2570081
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 378 gctggcggcgctggacacggtggac 402 ||||||||||||||||| ||||||| Sbjct: 2735273 gctggcggcgctggacaaggtggac 2735297
>dbj|AK078235.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430530G06 product:unclassifiable, full insert sequence Length = 2065 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 tccttcccctctctccaccta 42 ||||||||||||||||||||| Sbjct: 646 tccttcccctctctccaccta 626
>emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1831 bp) Length = 1831 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 269 aggccgcccgcgcggccttcgacaacggc 297 |||||||||||| ||||||||| |||||| Sbjct: 1246 aggccgcccgcgtggccttcgagaacggc 1274
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 ggcccagaatgcccggctgcgcaag 326 |||| |||||||||||||||||||| Sbjct: 432130 ggccgagaatgcccggctgcgcaag 432154
>emb|AL591205.13| Mouse DNA sequence from clone RP23-333M1 on chromosome 11, complete sequence Length = 183369 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 tccttcccctctctccaccta 42 ||||||||||||||||||||| Sbjct: 169112 tccttcccctctctccaccta 169092
>ref|XM_634106.1| Dictyostelium discoideum hypothetical protein (DDB0185395), partial mRNA Length = 1293 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cgctggacacggtggacgcc 405 |||||||||||||||||||| Sbjct: 776 cgctggacacggtggacgcc 757
>ref|XM_426217.1| PREDICTED: Gallus gallus similar to carbamoylphosphate synthetase 2/aspartate transcarbamylase/dihydroorotase; CAD trifunctional protein; multifunctional protein CAD (LOC428659), mRNA Length = 5274 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 gacatcaagttcaccaagctcttc 147 |||||||||| ||||||||||||| Sbjct: 5149 gacatcaagtgcaccaagctcttc 5172
>ref|XM_956517.1| Neurospora crassa OR74A hypothetical protein (NCU00998.1) partial mRNA Length = 3357 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ggaggagctggcggcgctgg 391 |||||||||||||||||||| Sbjct: 3214 ggaggagctggcggcgctgg 3233
>ref|XM_326490.1| Neurospora crassa OR74A hypothetical protein (NCU00998.1) partial mRNA Length = 3357 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ggaggagctggcggcgctgg 391 |||||||||||||||||||| Sbjct: 3214 ggaggagctggcggcgctgg 3233
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gacgtcgatggcggcagcga 91 |||||||||||||||||||| Sbjct: 777773 gacgtcgatggcggcagcga 777754
>gb|AY330220.1| Achromobacter denitrificans omega-amino acid:pyruvate transaminase (aptA) gene, complete cds Length = 1947 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 256 gacctcgccgtgaaggccgcccgcgcggcctt 287 ||||| |||||| |||||||||||||||||| Sbjct: 1787 gacctggccgtggcggccgcccgcgcggcctt 1818
>emb|Z93242.1|HS389A20 Human DNA sequence from clone RP3-389A20 on chromosome Xp22.11-22.2 Contains a calcium binding protein P22 (CHP)pseudogene, a novel gene, the 3' end of the NHS gene for Nance-Horan syndrome (congenital cataracts and dental anomalies), the SCML1 gene for sex comb on midleg-like 1 (Drosophila), a novel pseudogene and the RAI2 gene for retinoic acid induced 2, complete sequence Length = 208609 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gaggaacacaacctccttcc 28 |||||||||||||||||||| Sbjct: 175182 gaggaacacaacctccttcc 175201
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 ggccgacatcgacctcgccgtgaa 269 ||||||||||||||| |||||||| Sbjct: 1098647 ggccgacatcgacctggccgtgaa 1098624
>emb|Y11547.1|SVSNBDE S.virginiae snbDE gene, partial Length = 5994 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 gccgacctggtcgaccagca 368 |||||||||||||||||||| Sbjct: 3725 gccgacctggtcgaccagca 3706
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ggaggagctggcggcgctgg 391 |||||||||||||||||||| Sbjct: 240516 ggaggagctggcggcgctgg 240497
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ccagatgggcaagctggtgg 436 |||||||||||||||||||| Sbjct: 286096 ccagatgggcaagctggtgg 286115
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ttcgacaacggcccctggcc 305 |||||||||||||||||||| Sbjct: 3982011 ttcgacaacggcccctggcc 3982030 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gatgggcaagctggtggaca 439 |||||||||||||||||||| Sbjct: 806951 gatgggcaagctggtggaca 806970
>gb|AE011720.1| Xanthomonas axonopodis pv. citri str. 306, section 98 of 469 of the complete genome Length = 10983 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 ttcgacaacggcccctggcc 305 |||||||||||||||||||| Sbjct: 1404 ttcgacaacggcccctggcc 1385
>gb|AE012222.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 130 of 460 of the complete genome Length = 11629 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 acgccggcaagctgttccag 420 |||||||||||||||||||| Sbjct: 8221 acgccggcaagctgttccag 8202
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 gacaaggccgacatcgacct 260 |||||||||||||||||||| Sbjct: 3885102 gacaaggccgacatcgacct 3885083
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 acgccggcaagctgttccag 420 |||||||||||||||||||| Sbjct: 3601081 acgccggcaagctgttccag 3601100
>ref|XM_624213.1| PREDICTED: Apis mellifera similar to ENSANGP00000015084 (LOC551828), mRNA Length = 3222 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 ccggcgaggtgatcgccagg 228 |||||||||||||||||||| Sbjct: 247 ccggcgaggtgatcgccagg 228
>gb|AC084583.1|CBRG41B07 Caenorhabditis briggsae cosmid G41B07, complete sequence Length = 34595 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 tcgacaacggcccctggcccagaa 310 ||||||||||||||||||| |||| Sbjct: 18845 tcgacaacggcccctggcctagaa 18868
>gb|AC084560.1|CBRG36C02 Caenorhabditis briggsae cosmid G36C02, complete sequence Length = 37533 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 tcgacaacggcccctggcccagaa 310 ||||||||||||||||||| |||| Sbjct: 17710 tcgacaacggcccctggcctagaa 17733
>gb|AC084532.1|CBRG22L08 Caenorhabditis briggsae cosmid G22L08, complete sequence Length = 34558 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 tcgacaacggcccctggcccagaa 310 ||||||||||||||||||| |||| Sbjct: 22990 tcgacaacggcccctggcctagaa 23013 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 tcgacaacggcccctggcccagaa 310 ||||||||||||||||||| |||| Sbjct: 22658 tcgacaacggcccctggcctagaa 22635
>gb|AC084444.1|AC084444 Caenorhabditis briggsae cosmid CB014E04, complete sequence Length = 75003 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 tcgacaacggcccctggcccagaa 310 ||||||||||||||||||| |||| Sbjct: 53027 tcgacaacggcccctggcctagaa 53050
>dbj|AP005763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0015G09 Length = 140893 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 72 gacgtcgatggcggcagcgaacggcggc 99 |||||||||| |||| |||||||||||| Sbjct: 33976 gacgtcgatgtcggcggcgaacggcggc 33949
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 ggtgatcgccaggatcgccg 235 |||||||||||||||||||| Sbjct: 580292 ggtgatcgccaggatcgccg 580273
>dbj|AP005910.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0034G14 Length = 154120 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 72 gacgtcgatggcggcagcgaacggcggc 99 |||||||||| |||| |||||||||||| Sbjct: 138782 gacgtcgatgtcggcggcgaacggcggc 138755
>ref|XM_315264.2| Anopheles gambiae str. PEST ENSANGP00000022301 (ENSANGG00000019812), partial mRNA Length = 1572 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ggaggagctggcggcgctgg 391 |||||||||||||||||||| Sbjct: 1344 ggaggagctggcggcgctgg 1363
>gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete sequence Length = 52591 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 caagctggtggacatccccg 445 |||||||||||||||||||| Sbjct: 11004 caagctggtggacatccccg 10985
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 agttcgccgacctggtcgac 363 |||||||||||||||||||| Sbjct: 2917953 agttcgccgacctggtcgac 2917972
>gb|AY616097.1| Prototheca wickerhamii plastid adenylosuccinate synthetase mRNA, partial cds; nuclear gene for plastid product Length = 628 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 gggcaagctggtggacatcc 442 |||||||||||||||||||| Sbjct: 299 gggcaagctggtggacatcc 318
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ttcgacaacggcccctggcc 305 |||||||||||||||||||| Sbjct: 3984304 ttcgacaacggcccctggcc 3984323 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gatgggcaagctggtggaca 439 |||||||||||||||||||| Sbjct: 838648 gatgggcaagctggtggaca 838667
>emb|AJ875019.1| Streptoalloteichus hindustanus partial apramycin biosynthesis gene cluster, type strain DSM 44523T Length = 39979 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 gacctggtcgaccagcacgt 371 |||||||||||||||||||| Sbjct: 15745 gacctggtcgaccagcacgt 15726
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 aggagctggcggcgctggacacgg 397 ||||||||||||||||||| |||| Sbjct: 2671444 aggagctggcggcgctggatacgg 2671467
>emb|AL670603.6| Mouse DNA sequence from clone RP23-276M23 on chromosome 4, complete sequence Length = 173696 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cctccttcccctctctccac 39 |||||||||||||||||||| Sbjct: 75509 cctccttcccctctctccac 75490 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,350,118 Number of Sequences: 3902068 Number of extensions: 3350118 Number of successful extensions: 86499 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 82248 Number of HSP's gapped (non-prelim): 4243 length of query: 520 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 497 effective length of database: 17,143,297,704 effective search space: 8520218958888 effective search space used: 8520218958888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
