>TMBI4_MOUSE (Q9DA39) Transmembrane BAX inhibitor motif-containing protein 4|
           (Z-protein)
          Length = 238

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 24/83 (28%), Positives = 35/83 (42%)
 Frame = +1

Query: 181 LRWGFIRKVYGILCAQXXXXXXXXXXXXFHPTLNATLSNSPXXXXXXXXXPFILMIPLYI 360
           +R  F+RKVY IL  Q            +   L   +  SP            L+  L +
Sbjct: 30  IRMAFLRKVYSILSLQVLLTTVTSALFLYFQALRTFVHESPALIVVFALGSLGLIFALTL 89

Query: 361 YQHRHPHNLAILGLFTLCLSFSI 429
           ++H HP NL +L  FTL  S ++
Sbjct: 90  HRHTHPLNLYLLFAFTLSESLAV 112

>TMBI4_HUMAN (Q9HC24) Transmembrane BAX inhibitor motif-containing protein 4|
           (Z-protein) (S1R protein)
          Length = 238

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 27/123 (21%), Positives = 45/123 (36%)
 Frame = +1

Query: 181 LRWGFIRKVYGILCAQXXXXXXXXXXXXFHPTLNATLSNSPXXXXXXXXXPFILMIPLYI 360
           +R  F+RKVY IL  Q            +  ++   +  SP            L+  L +
Sbjct: 30  IRMAFLRKVYSILSLQVLLTTVTSTVFLYFESVRTFVHESPALILLFALGSLGLIFALTL 89

Query: 361 YQHRHPHNLAILGLFTLCLSFSIGVACANTEGTIXXXXXXXXXXXXXXXXXYTFWASKKG 540
            +H++P NL +L  FTL  + ++ V     +  I                 YT  + K  
Sbjct: 90  NRHKYPLNLYLLFGFTLLEALTVAVVVTFYDVYIILQAFILTTTVFFGLTVYTLQSKKDF 149

Query: 541 KEF 549
            +F
Sbjct: 150 SKF 152

>MA2B1_FELCA (O46432) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)|
           (Mannosidase, alpha B) (Lysosomal acid
           alpha-mannosidase) (Laman) (Mannosidase alpha class 2B
           member 1)
          Length = 1007

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 30/87 (34%), Positives = 32/87 (36%), Gaps = 4/87 (4%)
 Frame = +3

Query: 120 RPGGGERGDALPGDLARGERPPLGLHPQGXXXXXXXXXXXXXXXXXXXXXXXXXXXALQL 299
           R GGG RG A PG  +R   PPL                                  L L
Sbjct: 11  RAGGGGRGAARPGTSSRALPPPLP---------------------------PLSFLLLLL 43

Query: 300 ARPGARAR----CPPLHPDDPIVHLSA 368
           A PGARA     CP +HPD   VHL A
Sbjct: 44  AAPGARAAGYETCPMVHPDMLNVHLVA 70

>US14_HCMVA (P09719) Hypothetical protein HVLF4|
          Length = 310

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
 Frame = +1

Query: 172 ENALRW----GFIRKVYGILCAQXXXXXXXXXXXXF-HPTLNATLSNSPXXXXXXXXXPF 336
           E+A+ W      + +VYG+L  +              +P+L    S+ P         P 
Sbjct: 53  EDAVCWLRRTAIVMRVYGLLTLETAFSVLISALVWLGYPSLGYKCSDDPSPLLLSCT-PV 111

Query: 337 ILMIPLYIYQHRHPHNLAILGLFTLCLSFS 426
           +++  L +  HRHP N  +  L+   LSF+
Sbjct: 112 LVLGALELTDHRHPSNGLVFALYVALLSFT 141

>FAIM2_RAT (O88407) Fas apoptotic inhibitory molecule 2 (Lifeguard protein)|
           (Neural membrane protein 35)
          Length = 316

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 35/130 (26%), Positives = 49/130 (37%), Gaps = 3/130 (2%)
 Frame = +1

Query: 55  PLAPSGYRRAPEMKEKVEASSIDLEAGNGETLYPGISRGENALRWGFIRKVYGILCAQXX 234
           PL PS     P      E       AG+ E L+   S  +  +R  FIRKVY IL  Q  
Sbjct: 60  PLHPSWAYVDPSSSSGYEGG---FPAGHHE-LFSTFSWDDQKVRQLFIRKVYTILLVQLL 115

Query: 235 XXXXXXXXXXFHPTLNATLSNSPXXXXXXXXXPFILMIPLYIYQ--HRH-PHNLAILGLF 405
                     F   +   +  +P          F   + L       RH P NL +L +F
Sbjct: 116 VTLAVVALFTFCDVVKDYVQANPGWYWASYAVFFATYLTLACCSGPRRHFPWNLILLTIF 175

Query: 406 TLCLSFSIGV 435
           TL +++  G+
Sbjct: 176 TLSMAYLTGM 185

>TMBI1_HUMAN (Q969X1) Transmembrane BAX inhibitor motif-containing protein 1|
           (RECS1 protein homolog)
          Length = 311

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
 Frame = +1

Query: 172 ENALRWGFIRKVYGILCAQXXXXXXXXXXXXFHPTLNATLSNSPXXXXXXXXXPFILMIP 351
           +  +R  FIRKVY I+  Q            F   ++A +  +            +  + 
Sbjct: 91  DRKVRHTFIRKVYSIISVQLLITVAIIAIFTFVEPVSAFVRRNVAVYYVSYAVFVVTYLI 150

Query: 352 LYIYQ---HRHPHNLAILGLFTLCLSFSIG 432
           L   Q    R P N+ +L LFT  + F  G
Sbjct: 151 LACCQGPRRRFPWNIILLTLFTFAMGFMTG 180

>BPA1_MOUSE (Q91ZU6) Bullous pemphigoid antigen 1, isoforms 1/2/3/4 (BPA)|
            (Hemidesmosomal plaque protein) (Dystonia musculorum
            protein) (Dystonin)
          Length = 7389

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +1

Query: 34   ASATEMQPLAPSGYRRAPEMKEKVEASSIDLEAGNGETLYPGISRG 171
            + + + Q L PSG  + PE  +KV A +I+   G   +++  + RG
Sbjct: 1529 SESLKQQELQPSGESKVPEKPDKVIAGTINQTTGEVLSVFQAVLRG 1574

>MRP6_RAT (O88269) Multidrug resistance-associated protein 6 (ATP-binding|
            cassette sub-family C member 6) (MRP-like protein 1)
            (MLP-1)
          Length = 1502

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +1

Query: 70   GYRRAPEMKEKVEASSIDLEAGNGETLYPGISRGENALRWGFIR 201
            G R  PE+   V+  S+ + AG    +      G+++L WG +R
Sbjct: 1270 GLRHRPELPMAVQGVSLKIHAGEKVGIVGRTGAGKSSLTWGLLR 1313

>FAIM2_HUMAN (Q9BWQ8) Fas apoptotic inhibitory molecule 2 (Lifeguard protein)|
           (Transmembrane BAX inhibitor motif-containing protein 2)
          Length = 316

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 6/133 (4%)
 Frame = +1

Query: 55  PLAPSGYRRAPEMKEKVEASSIDLEAG---NGETLYPGISRGENALRWGFIRKVYGILCA 225
           P AP+     P       +SS   + G       L+   S  +  +R  F+RKVY IL  
Sbjct: 53  PPAPTAVPLHPSWAYVDPSSSSSYDNGFPTGDHELFTTFSWDDQKVRRVFVRKVYTILLI 112

Query: 226 QXXXXXXXXXXXXFHPTLNATLSNSPXXXXXXXXXPFILMIPLYIYQ--HRH-PHNLAIL 396
           Q            F   +   +  +P          F   + L       RH P NL +L
Sbjct: 113 QLLVTLAVVALFTFCDPVKDYVQANPGWYWASYAVFFATYLTLACCSGPRRHFPWNLILL 172

Query: 397 GLFTLCLSFSIGV 435
            +FTL +++  G+
Sbjct: 173 TVFTLSMAYLTGM 185

>MRP6_MOUSE (Q9R1S7) Multidrug resistance-associated protein 6 (ATP-binding|
            cassette sub-family C member 6)
          Length = 1498

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +1

Query: 70   GYRRAPEMKEKVEASSIDLEAGNGETLYPGISRGENALRWGFIR 201
            G R  PE+   V+  S+ + AG    +      G+++L WG +R
Sbjct: 1266 GLRHRPELPLAVQGVSLKIHAGEKVGIVGRTGAGKSSLAWGLLR 1309

>SNTB2_HUMAN (Q13425) Beta-2-syntrophin (59 kDa dystrophin-associated protein|
           A1, basic component 2) (Syntrophin 3) (SNT3)
           (Syntrophin-like) (SNTL)
          Length = 540

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 123 PGGGERGDALPGDLARGERPP 185
           P GG  GD+LPG  +RG  PP
Sbjct: 74  PNGGGAGDSLPGSPSRGLGPP 94


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,512,796
Number of Sequences: 219361
Number of extensions: 1095208
Number of successful extensions: 3630
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3621
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)