| Clone Name | basd11d09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK070043.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039E14, full insert sequence Length = 1106 Score = 478 bits (241), Expect = e-131 Identities = 462/533 (86%), Gaps = 2/533 (0%) Strand = Plus / Plus Query: 30 gatggcgtcggcgacggagatgcagccactggcaccgtcgggctaccgccgggcgccgga 89 ||||||||||||| ||||||||||||| ||||| ||| |||||||||||||||||||||| Sbjct: 81 gatggcgtcggcggcggagatgcagccgctggccccggcgggctaccgccgggcgccgga 140 Query: 90 gatgaaggagaaggtggaggcctcgtcgatcgacctggaggcggggaacggggagacgct 149 |||||||||||||||||| ||||| || | ||||||||||| || | |||||||||||| Sbjct: 141 gatgaaggagaaggtggacgcctccgcggtggacctggaggccggcaccggggagacgct 200 Query: 150 ctacccggggatctcgcgcggggagaacgccctccgctggggcttcatccgcaaggtcta 209 ||||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||| || Sbjct: 201 gtacccggggatctcgcgcggggagagcgccctccggtgggggttcgtccgcaaggtgta 260 Query: 210 cggcatcctctgcgcgcagctgctcctcaccaccgtcgtctccgccgtaaccgtcttcca 269 |||||||||| ||||||||||||||||||||||| ||||||||| | |||||| |||| Sbjct: 261 cggcatcctcgccgcgcagctgctcctcaccaccgccgtctccgcgctcaccgtcctcca 320 Query: 270 ccccaccctcaacgccacgctctccaactcgcccgtcctggcgctcgtgctcgctgtcct 329 ||||||||||||||||||||||||| ||| || ||| || ||||||||||| ||||| Sbjct: 321 ccccaccctcaacgccacgctctcctcctccccgaccctcgccctcgtgctcgccgtcct 380 Query: 330 ccccttcatcctgatgatcccattgta-catctatcagcacaggcacccgcacaatcttg 388 ||||||| |||||||| |||||||||| ||| |||||||||| ||||| ||||| ||| Sbjct: 381 ccccttcgtcctgatggtcccattgtatcat-tatcagcacaaacacccacacaactttg 439 Query: 389 ctatcttgggtttgttcactctgtgcttgagcttcagcattggtgtggcttgtgcaaaca 448 | | ||||| ||||||| |||||||||| ||||| ||||||||||| ||||| |||| Sbjct: 440 tttacctgggtctgttcacgttgtgcttgagtttcagtattggtgtggcatgtgctaaca 499 Query: 449 ctgaaggaaccattgtgcttcaggctttggtactgacctcagctgtggttgtctctctga 508 || |||| | ||||||||| |||| || || |||||||||||||||||| |||| ||| Sbjct: 500 ctcaagggaaaattgtgcttgaggcattaatattgacctcagctgtggttgcctctttga 559 Query: 509 ctgcgtacacattctgggcttcaaagaagggcaaggaatttagttaccttgga 561 ||||||| || |||||||||||||||||||| || |||||| |||| |||||| Sbjct: 560 ctgcgtatactttctgggcttcaaagaaggggaaagaatttggttatcttgga 612
>dbj|AK104366.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D07, full insert sequence Length = 1060 Score = 470 bits (237), Expect = e-129 Identities = 461/533 (86%), Gaps = 2/533 (0%) Strand = Plus / Plus Query: 30 gatggcgtcggcgacggagatgcagccactggcaccgtcgggctaccgccgggcgccgga 89 ||||||||||||| ||||||||||||| ||||| ||| |||||||||||||||||||||| Sbjct: 80 gatggcgtcggcggcggagatgcagccgctggccccggcgggctaccgccgggcgccgga 139 Query: 90 gatgaaggagaaggtggaggcctcgtcgatcgacctggaggcggggaacggggagacgct 149 ||||||||||||||||| ||||| || | ||||||||||| || | |||||||||||| Sbjct: 140 gatgaaggagaaggtgggcgcctccgcggtggacctggaggccggcaccggggagacgct 199 Query: 150 ctacccggggatctcgcgcggggagaacgccctccgctggggcttcatccgcaaggtcta 209 ||||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||| || Sbjct: 200 gtacccggggatctcgcgcggggagagcgccctccggtgggggttcgtccgcaaggtgta 259 Query: 210 cggcatcctctgcgcgcagctgctcctcaccaccgtcgtctccgccgtaaccgtcttcca 269 |||||||||| ||||||||||||||||||||||| ||||||||| | |||||| |||| Sbjct: 260 cggcatcctcgccgcgcagctgctcctcaccaccgccgtctccgcgctcaccgtcctcca 319 Query: 270 ccccaccctcaacgccacgctctccaactcgcccgtcctggcgctcgtgctcgctgtcct 329 ||||||||||||||||||||||||| ||| || ||| || ||||||||||| ||||| Sbjct: 320 ccccaccctcaacgccacgctctcctcctccccgaccctcgccctcgtgctcgccgtcct 379 Query: 330 ccccttcatcctgatgatcccattgta-catctatcagcacaggcacccgcacaatcttg 388 ||||||| |||||||| |||||||||| ||| |||||||||| ||||| ||||| ||| Sbjct: 380 ccccttcgtcctgatggtcccattgtatcat-tatcagcacaaacacccacacaactttg 438 Query: 389 ctatcttgggtttgttcactctgtgcttgagcttcagcattggtgtggcttgtgcaaaca 448 | | ||||| ||||||| |||||||||| ||||| ||||||||||| ||||| |||| Sbjct: 439 tttacctgggtctgttcacgttgtgcttgagtttcagtattggtgtggcatgtgctaaca 498 Query: 449 ctgaaggaaccattgtgcttcaggctttggtactgacctcagctgtggttgtctctctga 508 || |||| | ||||||||| |||| || || |||||||||||||||||| |||| ||| Sbjct: 499 ctcaagggaaaattgtgcttgaggcattaatattgacctcagctgtggttgcctctttga 558 Query: 509 ctgcgtacacattctgggcttcaaagaagggcaaggaatttagttaccttgga 561 ||||||| || |||||||||||||||||||| || |||||| |||| |||||| Sbjct: 559 ctgcgtatactttctgggcttcaaagaaggggaaagaatttggttatcttgga 611
>dbj|AK104199.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A08, full insert sequence Length = 1060 Score = 470 bits (237), Expect = e-129 Identities = 461/533 (86%), Gaps = 2/533 (0%) Strand = Plus / Plus Query: 30 gatggcgtcggcgacggagatgcagccactggcaccgtcgggctaccgccgggcgccgga 89 ||||||||||||| ||||||||||||| ||||| ||| |||||||||||||||||||||| Sbjct: 80 gatggcgtcggcggcggagatgcagccgctggccccggcgggctaccgccgggcgccgga 139 Query: 90 gatgaaggagaaggtggaggcctcgtcgatcgacctggaggcggggaacggggagacgct 149 ||||||||||||||||| ||||| || | ||||||||||| || | |||||||||||| Sbjct: 140 gatgaaggagaaggtgggcgcctccgcggtggacctggaggccggcaccggggagacgct 199 Query: 150 ctacccggggatctcgcgcggggagaacgccctccgctggggcttcatccgcaaggtcta 209 ||||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||| || Sbjct: 200 gtacccggggatctcgcgcggggagagcgccctccggtgggggttcgtccgcaaggtgta 259 Query: 210 cggcatcctctgcgcgcagctgctcctcaccaccgtcgtctccgccgtaaccgtcttcca 269 |||||||||| ||||||||||||||||||||||| ||||||||| | |||||| |||| Sbjct: 260 cggcatcctcgccgcgcagctgctcctcaccaccgccgtctccgcgctcaccgtcctcca 319 Query: 270 ccccaccctcaacgccacgctctccaactcgcccgtcctggcgctcgtgctcgctgtcct 329 ||||||||||||||||||||||||| ||| || ||| || ||||||||||| ||||| Sbjct: 320 ccccaccctcaacgccacgctctcctcctccccgaccctcgccctcgtgctcgccgtcct 379 Query: 330 ccccttcatcctgatgatcccattgta-catctatcagcacaggcacccgcacaatcttg 388 ||||||| |||||||| |||||||||| ||| |||||||||| ||||| ||||| ||| Sbjct: 380 ccccttcgtcctgatggtcccattgtatcat-tatcagcacaaacacccacacaactttg 438 Query: 389 ctatcttgggtttgttcactctgtgcttgagcttcagcattggtgtggcttgtgcaaaca 448 | | ||||| ||||||| |||||||||| ||||| ||||||||||| ||||| |||| Sbjct: 439 tttacctgggtctgttcacgttgtgcttgagtttcagtattggtgtggcatgtgctaaca 498 Query: 449 ctgaaggaaccattgtgcttcaggctttggtactgacctcagctgtggttgtctctctga 508 || |||| | ||||||||| |||| || || |||||||||||||||||| |||| ||| Sbjct: 499 ctcaagggaaaattgtgcttgaggcattaatattgacctcagctgtggttgcctctttga 558 Query: 509 ctgcgtacacattctgggcttcaaagaagggcaaggaatttagttaccttgga 561 ||||||| || |||||||||||||||||||| || |||||| |||| |||||| Sbjct: 559 ctgcgtatactttctgggcttcaaagaaggggaaagaatttggttatcttgga 611
>gb|AY104589.1| Zea mays PCO067801 mRNA sequence Length = 1197 Score = 460 bits (232), Expect = e-126 Identities = 456/528 (86%), Gaps = 2/528 (0%) Strand = Plus / Plus Query: 22 gagagcgagatggcgtcggcgacggagatgcagccactggcaccgtcgggctaccgccgg 81 ||||| |||||||| |||| | ||||||||||||| || || ||| |||| |||||||| Sbjct: 126 gagagagagatggcatcggtggcggagatgcagcccctcgcgccggcggggtaccgccgc 185 Query: 82 gcgccggagatgaaggagaaggtggaggcctcgtcgatcgacctggaggcggggaacggg 141 ||||||||||||||||||||||||||||| ||| | | ||||||||||| |||| |||| Sbjct: 186 gcgccggagatgaaggagaaggtggaggcgtcggtggtggacctggaggccgggaccggg 245 Query: 142 gagacgctctacccggggatctcgcgcggggagaacgccctccgctggggcttcatccgc 201 |||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| ||||| Sbjct: 246 gagacgctgtacccggggatctcgcgcggggagagcgccctccgatggggcttcgtccgc 305 Query: 202 aaggtctacggcatcctctgcgcgcagctgctcctcaccaccgtcgtctccgccgtaacc 261 |||||||||||||||||| |||||||||||||||||||||| |||||||||| | ||| Sbjct: 306 aaggtctacggcatcctcgctgcgcagctgctcctcaccaccgccgtctccgccctcacc 365 Query: 262 gtcttccaccccaccctcaacgccacgctctccaactcgcccgtcctggcgctcgtgctc 321 || ||||||||||||||||||||||||||||| |||| || | ||| |||||||||||| Sbjct: 366 gttctccaccccaccctcaacgccacgctctccgactccccgggcctcgcgctcgtgctc 425 Query: 322 gctgtcctccccttcatcctgatgatcccattgta-catctatcagcacaggcacccgca 380 || ||||| |||||||||||||||||||||||||| ||| |||||||||| |||||| || Sbjct: 426 gccgtcctgcccttcatcctgatgatcccattgtatcat-tatcagcacaagcacccaca 484 Query: 381 caatcttgctatcttgggtttgttcactctgtgcttgagcttcagcattggtgtggcttg 440 |||| | | | || ||||| ||||||| ||||||||||||||||||| ||||||||||| Sbjct: 485 caatttcgttttcctgggtctgttcacgttgtgcttgagcttcagcatcggtgtggcttg 544 Query: 441 tgcaaacactgaaggaaccattgtgcttcaggctttggtactgacctcagctgtggttgt 500 ||| ||||| |||| | || || || ||||||| || ||||| | | ||||| || Sbjct: 545 tgctaacacccaagggaaaatcgttctggaggctttagtgctgacggctggcgtggtggt 604 Query: 501 ctctctgactgcgtacacattctgggcttcaaagaagggcaaggaatt 548 |||||||||||||| | |||||||| |||||||||||||||||||| Sbjct: 605 ttctctgactgcgtatgctttctgggcgtcaaagaagggcaaggaatt 652
>gb|BT016325.1| Zea mays clone Contig158 mRNA sequence Length = 1172 Score = 444 bits (224), Expect = e-121 Identities = 454/528 (85%), Gaps = 2/528 (0%) Strand = Plus / Plus Query: 22 gagagcgagatggcgtcggcgacggagatgcagccactggcaccgtcgggctaccgccgg 81 ||||| |||||||| |||| | ||||||||||||| || || || ||||| |||||||| Sbjct: 80 gagagagagatggcatcggtggcggagatgcagcccctcgcgccctcggggtaccgccgc 139 Query: 82 gcgccggagatgaaggagaaggtggaggcctcgtcgatcgacctggaggcggggaacggg 141 ||||||||||||||||||||||||||||| ||| | | ||||||||||| || | |||| Sbjct: 140 gcgccggagatgaaggagaaggtggaggcgtcggtggtggacctggaggccggcaccggg 199 Query: 142 gagacgctctacccggggatctcgcgcggggagaacgccctccgctggggcttcatccgc 201 |||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| ||||| Sbjct: 200 gagacgctgtacccggggatctcgcgcggggagagcgccctccgatggggcttcgtccgc 259 Query: 202 aaggtctacggcatcctctgcgcgcagctgctcctcaccaccgtcgtctccgccgtaacc 261 ||||||||||||| |||| |||||||||||||||||||||| |||||||||| | ||| Sbjct: 260 aaggtctacggcaccctcgctgcgcagctgctcctcaccaccgccgtctccgccctcacc 319 Query: 262 gtcttccaccccaccctcaacgccacgctctccaactcgcccgtcctggcgctcgtgctc 321 || ||||||||||||||||||||||||||||| |||| || | ||| |||||||||||| Sbjct: 320 gttctccaccccaccctcaacgccacgctctccgactccccgggcctcgcgctcgtgctc 379 Query: 322 gctgtcctccccttcatcctgatgatcccattgta-catctatcagcacaggcacccgca 380 || ||||| |||||||||||||||||||||||||| ||| |||||||||| |||||| || Sbjct: 380 gccgtcctgcccttcatcctgatgatcccattgtatcat-tatcagcacaagcacccaca 438 Query: 381 caatcttgctatcttgggtttgttcactctgtgcttgagcttcagcattggtgtggcttg 440 |||| | | | || ||||| ||||||| ||||||||||||||||||| ||||||||||| Sbjct: 439 caatttcgttttcctgggtctgttcacgttgtgcttgagcttcagcatcggtgtggcttg 498 Query: 441 tgcaaacactgaaggaaccattgtgcttcaggctttggtactgacctcagctgtggttgt 500 ||| ||||| |||| | || || || ||||||| || ||||| | | ||||| || Sbjct: 499 tgctaacacccaagggaaaatcgttctggaggctttagtgctgacggctggcgtggtggt 558 Query: 501 ctctctgactgcgtacacattctgggcttcaaagaagggcaaggaatt 548 |||||||||||||| | |||||||| |||||||||||||||||||| Sbjct: 559 ttctctgactgcgtatgctttctgggcgtcaaagaagggcaaggaatt 606
>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16, complete sequence Length = 170233 Score = 339 bits (171), Expect = 6e-90 Identities = 273/307 (88%) Strand = Plus / Minus Query: 30 gatggcgtcggcgacggagatgcagccactggcaccgtcgggctaccgccgggcgccgga 89 ||||||||||||| ||||||||||||| ||||| ||| |||||||||||||||||||||| Sbjct: 149745 gatggcgtcggcggcggagatgcagccgctggccccggcgggctaccgccgggcgccgga 149686 Query: 90 gatgaaggagaaggtggaggcctcgtcgatcgacctggaggcggggaacggggagacgct 149 |||||||||||||||||| ||||| || | ||||||||||| || | |||||||||||| Sbjct: 149685 gatgaaggagaaggtggacgcctccgcggtggacctggaggccggcaccggggagacgct 149626 Query: 150 ctacccggggatctcgcgcggggagaacgccctccgctggggcttcatccgcaaggtcta 209 ||||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||| || Sbjct: 149625 gtacccggggatctcgcgcggggagagcgccctccggtgggggttcgtccgcaaggtgta 149566 Query: 210 cggcatcctctgcgcgcagctgctcctcaccaccgtcgtctccgccgtaaccgtcttcca 269 |||||||||| ||||||||||||||||||||||| ||||||||| | |||||| |||| Sbjct: 149565 cggcatcctcgccgcgcagctgctcctcaccaccgccgtctccgcgctcaccgtcctcca 149506 Query: 270 ccccaccctcaacgccacgctctccaactcgcccgtcctggcgctcgtgctcgctgtcct 329 ||||||||||||||||||||||||| ||| || ||| || ||||||||||| ||||| Sbjct: 149505 ccccaccctcaacgccacgctctcctcctccccgaccctcgccctcgtgctcgccgtcct 149446 Query: 330 ccccttc 336 ||||||| Sbjct: 149445 ccccttc 149439 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 460 attgtgcttcaggctttggtactgacctcagctgtggttgtctctctgactgcgtacaca 519 ||||||||| |||| || || |||||||||||||||||| |||| |||||||||| || Sbjct: 148231 attgtgcttgaggcattaatattgacctcagctgtggttgcctctttgactgcgtatact 148172 Query: 520 ttctgggcttcaaagaagggcaaggaatttagttaccttgga 561 |||||||||||||||||||| || |||||| |||| |||||| Sbjct: 148171 ttctgggcttcaaagaaggggaaagaatttggttatcttgga 148130 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 395 tgggtttgttcactctgtgcttgagcttcagcattggtgtggcttgtgcaaacactgaag 454 ||||| ||||||| |||||||||| ||||| ||||||||||| ||||| |||||| ||| Sbjct: 148382 tgggtctgttcacgttgtgcttgagtttcagtattggtgtggcatgtgctaacactcaag 148323 Query: 455 g 455 | Sbjct: 148322 g 148322
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 339 bits (171), Expect = 6e-90 Identities = 273/307 (88%) Strand = Plus / Minus Query: 30 gatggcgtcggcgacggagatgcagccactggcaccgtcgggctaccgccgggcgccgga 89 ||||||||||||| ||||||||||||| ||||| ||| |||||||||||||||||||||| Sbjct: 47108 gatggcgtcggcggcggagatgcagccgctggccccggcgggctaccgccgggcgccgga 47049 Query: 90 gatgaaggagaaggtggaggcctcgtcgatcgacctggaggcggggaacggggagacgct 149 |||||||||||||||||| ||||| || | ||||||||||| || | |||||||||||| Sbjct: 47048 gatgaaggagaaggtggacgcctccgcggtggacctggaggccggcaccggggagacgct 46989 Query: 150 ctacccggggatctcgcgcggggagaacgccctccgctggggcttcatccgcaaggtcta 209 ||||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||| || Sbjct: 46988 gtacccggggatctcgcgcggggagagcgccctccggtgggggttcgtccgcaaggtgta 46929 Query: 210 cggcatcctctgcgcgcagctgctcctcaccaccgtcgtctccgccgtaaccgtcttcca 269 |||||||||| ||||||||||||||||||||||| ||||||||| | |||||| |||| Sbjct: 46928 cggcatcctcgccgcgcagctgctcctcaccaccgccgtctccgcgctcaccgtcctcca 46869 Query: 270 ccccaccctcaacgccacgctctccaactcgcccgtcctggcgctcgtgctcgctgtcct 329 ||||||||||||||||||||||||| ||| || ||| || ||||||||||| ||||| Sbjct: 46868 ccccaccctcaacgccacgctctcctcctccccgaccctcgccctcgtgctcgccgtcct 46809 Query: 330 ccccttc 336 ||||||| Sbjct: 46808 ccccttc 46802 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 460 attgtgcttcaggctttggtactgacctcagctgtggttgtctctctgactgcgtacaca 519 ||||||||| |||| || || |||||||||||||||||| |||| |||||||||| || Sbjct: 45594 attgtgcttgaggcattaatattgacctcagctgtggttgcctctttgactgcgtatact 45535 Query: 520 ttctgggcttcaaagaagggcaaggaatttagttaccttgga 561 |||||||||||||||||||| || |||||| |||| |||||| Sbjct: 45534 ttctgggcttcaaagaaggggaaagaatttggttatcttgga 45493 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 395 tgggtttgttcactctgtgcttgagcttcagcattggtgtggcttgtgcaaacactgaag 454 ||||| ||||||| |||||||||| ||||| ||||||||||| ||||| |||||| ||| Sbjct: 45745 tgggtctgttcacgttgtgcttgagtttcagtattggtgtggcatgtgctaacactcaag 45686 Query: 455 g 455 | Sbjct: 45685 g 45685
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 339 bits (171), Expect = 6e-90 Identities = 273/307 (88%) Strand = Plus / Minus Query: 30 gatggcgtcggcgacggagatgcagccactggcaccgtcgggctaccgccgggcgccgga 89 ||||||||||||| ||||||||||||| ||||| ||| |||||||||||||||||||||| Sbjct: 19446396 gatggcgtcggcggcggagatgcagccgctggccccggcgggctaccgccgggcgccgga 19446337 Query: 90 gatgaaggagaaggtggaggcctcgtcgatcgacctggaggcggggaacggggagacgct 149 |||||||||||||||||| ||||| || | ||||||||||| || | |||||||||||| Sbjct: 19446336 gatgaaggagaaggtggacgcctccgcggtggacctggaggccggcaccggggagacgct 19446277 Query: 150 ctacccggggatctcgcgcggggagaacgccctccgctggggcttcatccgcaaggtcta 209 ||||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||| || Sbjct: 19446276 gtacccggggatctcgcgcggggagagcgccctccggtgggggttcgtccgcaaggtgta 19446217 Query: 210 cggcatcctctgcgcgcagctgctcctcaccaccgtcgtctccgccgtaaccgtcttcca 269 |||||||||| ||||||||||||||||||||||| ||||||||| | |||||| |||| Sbjct: 19446216 cggcatcctcgccgcgcagctgctcctcaccaccgccgtctccgcgctcaccgtcctcca 19446157 Query: 270 ccccaccctcaacgccacgctctccaactcgcccgtcctggcgctcgtgctcgctgtcct 329 ||||||||||||||||||||||||| ||| || ||| || ||||||||||| ||||| Sbjct: 19446156 ccccaccctcaacgccacgctctcctcctccccgaccctcgccctcgtgctcgccgtcct 19446097 Query: 330 ccccttc 336 ||||||| Sbjct: 19446096 ccccttc 19446090 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 460 attgtgcttcaggctttggtactgacctcagctgtggttgtctctctgactgcgtacaca 519 ||||||||| |||| || || |||||||||||||||||| |||| |||||||||| || Sbjct: 19444882 attgtgcttgaggcattaatattgacctcagctgtggttgcctctttgactgcgtatact 19444823 Query: 520 ttctgggcttcaaagaagggcaaggaatttagttaccttgga 561 |||||||||||||||||||| || |||||| |||| |||||| Sbjct: 19444822 ttctgggcttcaaagaaggggaaagaatttggttatcttgga 19444781 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 395 tgggtttgttcactctgtgcttgagcttcagcattggtgtggcttgtgcaaacactgaag 454 ||||| ||||||| |||||||||| ||||| ||||||||||| ||||| |||||| ||| Sbjct: 19445033 tgggtctgttcacgttgtgcttgagtttcagtattggtgtggcatgtgctaacactcaag 19444974 Query: 455 g 455 | Sbjct: 19444973 g 19444973
>gb|AC162030.8| Medicago truncatula clone mth2-178b21, complete sequence Length = 85986 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 520 ttctgggcttcaaagaagggcaaggaatttagttaccttgg 560 ||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 72418 ttctgggcttccaagaagggcaaggattttagctaccttgg 72378
>gb|BT014050.1| Lycopersicon esculentum clone 133147F, mRNA sequence Length = 1164 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 514 tacacattctgggcttcaaagaagggcaagga 545 ||||||||||||||||| |||||||||||||| Sbjct: 465 tacacattctgggcttctaagaagggcaagga 496
>gb|AY105221.1| Zea mays PCO086679 mRNA sequence Length = 1138 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 194 tcatccgcaaggtctacggcatcctctgcgcgcagctgctcctcaccaccgtcgtctccg 253 ||||||||||| |||||| ||| |||| | ||||||||||||||| |||||||| ||| Sbjct: 307 tcatccgcaagatctacgtcattctctccctccagctgctcctcaccgccgtcgtcgccg 366 Query: 254 c 254 | Sbjct: 367 c 367
>ref|XM_476832.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1205 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 505 ctgactgcgtacacattctgggcttcaaagaagggc 540 |||||||| ||||||||||||||| |||||| |||| Sbjct: 584 ctgactgcctacacattctgggctgcaaagaggggc 619
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 505 ctgactgcgtacacattctgggcttcaaagaagggc 540 |||||||| ||||||||||||||| |||||| |||| Sbjct: 4122098 ctgactgcctacacattctgggctgcaaagaggggc 4122063
>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1361_E02 Length = 100168 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 505 ctgactgcgtacacattctgggcttcaaagaagggc 540 |||||||| ||||||||||||||| |||||| |||| Sbjct: 5720 ctgactgcctacacattctgggctgcaaagaggggc 5685
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 505 ctgactgcgtacacattctgggcttcaaagaagggc 540 |||||||| ||||||||||||||| |||||| |||| Sbjct: 114956 ctgactgcctacacattctgggctgcaaagaggggc 114921
>dbj|AK073781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068H10, full insert sequence Length = 1203 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 505 ctgactgcgtacacattctgggcttcaaagaagggc 540 |||||||| ||||||||||||||| |||||| |||| Sbjct: 582 ctgactgcctacacattctgggctgcaaagaggggc 617
>ref|XM_653645.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1133.2), mRNA Length = 813 Score = 44.1 bits (22), Expect = 0.49 Identities = 46/54 (85%) Strand = Plus / Plus Query: 193 ttcatccgcaaggtctacggcatcctctgcgcgcagctgctcctcaccaccgtc 246 ||||||||||||||||| | |||||| || ||||||||||| ||||||||| Sbjct: 193 ttcatccgcaaggtctatgcgatcctcaccgtccagctgctcctaaccaccgtc 246
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 ctcaccaccgtcgtctccgccg 256 |||||||||||||||||||||| Sbjct: 1878944 ctcaccaccgtcgtctccgccg 1878965
>gb|AC092193.4| Bos taurus clone RP42-459A17, complete sequence Length = 258544 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 tgaaggagaaggtggaggcct 112 ||||||||||||||||||||| Sbjct: 200699 tgaaggagaaggtggaggcct 200719
>ref|XM_470337.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1614 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 gccggagatgaaggagaaggt 104 ||||||||||||||||||||| Sbjct: 153 gccggagatgaaggagaaggt 133
>ref|NM_001016838.2| Xenopus tropicalis hypothetical protein LOC549592 (LOC549592), mRNA Length = 1410 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 420 cttcagcattggtgtggcttgtgca 444 |||||||||||||||||||| |||| Sbjct: 686 cttcagcattggtgtggcttctgca 662
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 gccggagatgaaggagaaggt 104 ||||||||||||||||||||| Sbjct: 34827916 gccggagatgaaggagaaggt 34827896
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence Length = 164352 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gccggagatgaaggagaaggt 104 ||||||||||||||||||||| Sbjct: 34734 gccggagatgaaggagaaggt 34754
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 gccggagatgaaggagaaggt 104 ||||||||||||||||||||| Sbjct: 34917988 gccggagatgaaggagaaggt 34917968
>emb|CR855480.2| Xenopus tropicalis finished cDNA, clone TNeu095j18 Length = 1410 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 420 cttcagcattggtgtggcttgtgca 444 |||||||||||||||||||| |||| Sbjct: 686 cttcagcattggtgtggcttctgca 662
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 260 ccgtcttccaccccaccctcaacgccac 287 ||||||||||||||||| ||| |||||| Sbjct: 2307 ccgtcttccaccccaccatcaccgccac 2334
>gb|AC130279.5| Mus musculus chromosome 1, clone RP24-394G12, complete sequence Length = 207735 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gggctaccgccgggcgccgg 88 |||||||||||||||||||| Sbjct: 159070 gggctaccgccgggcgccgg 159051
>gb|BC059558.1| Danio rerio chaperonin containing TCP1, subunit 2 (beta), mRNA (cDNA clone MGC:73212 IMAGE:4790853), complete cds Length = 1784 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 agatgaaggagaaggtggag 108 |||||||||||||||||||| Sbjct: 846 agatgaaggagaaggtggag 865
>gb|BC054802.1| Mus musculus RIKEN cDNA 9630058J23 gene, mRNA (cDNA clone MGC:65712 IMAGE:6837803), complete cds Length = 4568 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gggctaccgccgggcgccgg 88 |||||||||||||||||||| Sbjct: 66 gggctaccgccgggcgccgg 47
>gb|AC116130.15| Mus musculus chromosome 17, clone RP23-98F21, complete sequence Length = 228842 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 ttgagcttcagcattggtgt 434 |||||||||||||||||||| Sbjct: 205857 ttgagcttcagcattggtgt 205876
>gb|AC167969.2| Mus musculus BAC clone RP24-446H24 from chromosome 17, complete sequence Length = 178774 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 tgtgcttgagcttcagcatt 429 |||||||||||||||||||| Sbjct: 139970 tgtgcttgagcttcagcatt 139951
>ref|XM_359291.3| PREDICTED: Mus musculus ring finger protein 39, transcript variant 1 (Rnf39), mRNA Length = 3401 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 ttgagcttcagcattggtgt 434 |||||||||||||||||||| Sbjct: 2499 ttgagcttcagcattggtgt 2480
>gb|AC113977.16| Mus musculus chromosome 1, clone RP23-161E13, complete sequence Length = 235738 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gggctaccgccgggcgccgg 88 |||||||||||||||||||| Sbjct: 15965 gggctaccgccgggcgccgg 15946
>ref|XM_756273.1| Ustilago maydis 521 hypothetical protein (UM05219.1) partial mRNA Length = 1830 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 gagcgagatggcgtcggcga 43 |||||||||||||||||||| Sbjct: 1432 gagcgagatggcgtcggcga 1451
>gb|AC129311.6| Mus musculus BAC clone RP24-404P10 from chromosome 3, complete sequence Length = 160537 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 cacattctgggcttcaaaga 535 |||||||||||||||||||| Sbjct: 38307 cacattctgggcttcaaaga 38288
>ref|XM_849968.1| PREDICTED: Canis familiaris similar to Cylicin-2 (Cylicin II) (Multiple-band polypeptide II) (LOC612232), mRNA Length = 1059 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 gcttcaaagaagggcaagga 545 |||||||||||||||||||| Sbjct: 694 gcttcaaagaagggcaagga 713
>gb|AC122384.3| Mus musculus BAC clone RP24-63P8 from chromosome 17, complete sequence Length = 190880 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 tgtgcttgagcttcagcatt 429 |||||||||||||||||||| Sbjct: 33762 tgtgcttgagcttcagcatt 33743
>emb|CR728712.2|CNS0GP7Y Tetraodon nigroviridis full-length cDNA Length = 1133 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 agatgaaggagaaggtggag 108 |||||||||||||||||||| Sbjct: 73 agatgaaggagaaggtggag 92
>emb|CR724120.2|CNS0GLOE Tetraodon nigroviridis full-length cDNA Length = 1127 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 agatgaaggagaaggtggag 108 |||||||||||||||||||| Sbjct: 74 agatgaaggagaaggtggag 93
>emb|CR722961.2|CNS0GKS7 Tetraodon nigroviridis full-length cDNA Length = 1275 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 agatgaaggagaaggtggag 108 |||||||||||||||||||| Sbjct: 223 agatgaaggagaaggtggag 242
>emb|CR702614.2|CNS0G536 Tetraodon nigroviridis full-length cDNA Length = 1873 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 agatgaaggagaaggtggag 108 |||||||||||||||||||| Sbjct: 830 agatgaaggagaaggtggag 849
>emb|CR683137.2|CNS0FQ25 Tetraodon nigroviridis full-length cDNA Length = 1341 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 agatgaaggagaaggtggag 108 |||||||||||||||||||| Sbjct: 297 agatgaaggagaaggtggag 316
>emb|AL161628.9| Human DNA sequence from clone RP11-31K16 on chromosome 9 Contains a pseudogene similar to part of nucleolar protein 5A (56kDa with KKE/D repeat) (NOL5A) (NOP56), the ELAVL2 gene for ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) (HUB, HELN1), two novel genes, the 5' end of a novel gene and a CpG island, complete sequence Length = 183483 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ctgatgatcccattgtacat 359 |||||||||||||||||||| Sbjct: 33491 ctgatgatcccattgtacat 33510
>emb|AL034348.5|HS84D21 Human DNA sequence from clone RP1-84D21 on chromosome 6q15-16.3, complete sequence Length = 120514 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 tgcttgagcttcagcattgg 431 |||||||||||||||||||| Sbjct: 28989 tgcttgagcttcagcattgg 28970
>emb|AL445623.2|HS315I14 Homo sapiens chromosome 9 BAC RP11-315I14, complete sequence Length = 198637 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ctgatgatcccattgtacat 359 |||||||||||||||||||| Sbjct: 159083 ctgatgatcccattgtacat 159102
>emb|CR860476.1| Pongo pygmaeus mRNA; cDNA DKFZp459C011 (from clone DKFZp459C011) Length = 3988 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 ttcagcattggtgtggcttgtgca 444 ||||||||||||||||||| |||| Sbjct: 799 ttcagcattggtgtggcttctgca 776
>emb|CR858051.1| Pongo pygmaeus mRNA; cDNA DKFZp459H1130 (from clone DKFZp459H1130) Length = 3990 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 ttcagcattggtgtggcttgtgca 444 ||||||||||||||||||| |||| Sbjct: 806 ttcagcattggtgtggcttctgca 783
>gb|AF506226.1| Danio rerio chaperonin-containing TCP-1 complex beta chain (cct2) mRNA, partial cds Length = 1554 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 agatgaaggagaaggtggag 108 |||||||||||||||||||| Sbjct: 852 agatgaaggagaaggtggag 871
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 ggcttcaaagaagggcaagg 544 |||||||||||||||||||| Sbjct: 1654051 ggcttcaaagaagggcaagg 1654032
>dbj|AK146681.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920041F12 product:hypothetical protein, full insert sequence Length = 4633 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gggctaccgccgggcgccgg 88 |||||||||||||||||||| Sbjct: 156 gggctaccgccgggcgccgg 137
>dbj|AK162607.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630054D02 product:protein phosphatase 1, regulatory (inhibitor) subunit 11, full insert sequence Length = 1564 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 ttgagcttcagcattggtgt 434 |||||||||||||||||||| Sbjct: 1273 ttgagcttcagcattggtgt 1292
>dbj|AK040666.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530010L13 product:hypothetical protein, full insert sequence Length = 2629 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gggctaccgccgggcgccgg 88 |||||||||||||||||||| Sbjct: 89 gggctaccgccgggcgccgg 70
>dbj|AK036332.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630058J23 product:hypothetical protein, full insert sequence Length = 4095 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gggctaccgccgggcgccgg 88 |||||||||||||||||||| Sbjct: 98 gggctaccgccgggcgccgg 79
>gb|BC050953.1| Danio rerio, clone IMAGE:5776777, mRNA Length = 1835 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 agatgaaggagaaggtggag 108 |||||||||||||||||||| Sbjct: 897 agatgaaggagaaggtggag 916
>dbj|AK087361.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030050E10 product:hypothetical protein, full insert sequence Length = 1348 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gggctaccgccgggcgccgg 88 |||||||||||||||||||| Sbjct: 86 gggctaccgccgggcgccgg 67
>dbj|AK089290.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730001J21 product:unclassifiable, full insert sequence Length = 1303 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gggctaccgccgggcgccgg 88 |||||||||||||||||||| Sbjct: 133 gggctaccgccgggcgccgg 114
>dbj|AK040899.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530041J03 product:hypothetical protein, full insert sequence Length = 3719 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gggctaccgccgggcgccgg 88 |||||||||||||||||||| Sbjct: 97 gggctaccgccgggcgccgg 78
>gb|AF532114.1| Mus musculus strain 129/SvJ BAC clone citb544e14 from the MHC region, complete sequence Length = 153869 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 ttgagcttcagcattggtgt 434 |||||||||||||||||||| Sbjct: 22040 ttgagcttcagcattggtgt 22021
>gb|AF532112.1| Mus musculus strain 129/SvJ BAC clone citb20h22 from the MHC region, complete sequence Length = 172199 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 ttgagcttcagcattggtgt 434 |||||||||||||||||||| Sbjct: 116456 ttgagcttcagcattggtgt 116437
>ref|NM_201455.1| Danio rerio chaperonin containing TCP1, subunit 2 (beta) (cct2), mRNA Length = 1784 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 agatgaaggagaaggtggag 108 |||||||||||||||||||| Sbjct: 846 agatgaaggagaaggtggag 865
>ref|NM_146105.3| Mus musculus RIKEN cDNA 9630058J23 gene (9630058J23Rik), mRNA Length = 4568 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gggctaccgccgggcgccgg 88 |||||||||||||||||||| Sbjct: 66 gggctaccgccgggcgccgg 47
>emb|AJ337232.1|HSA337232 Homo sapiens genomic sequence surrounding NotI site, clone NR5-FN12RS Length = 816 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cgccctccgctggggcttca 196 |||||||||||||||||||| Sbjct: 155 cgccctccgctggggcttca 136
>emb|AL049836.3|CNS0000H Human chromosome 14 DNA sequence BAC R-1029J19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 207774 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 cgggctaccgccgggcgccggaga 91 |||| ||||||||||||||||||| Sbjct: 115134 cgggttaccgccgggcgccggaga 115111
>emb|AL355032.6|CNS05TC3 Human chromosome 14 DNA sequence BAC R-796G6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 203108 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 cgggctaccgccgggcgccggaga 91 |||| ||||||||||||||||||| Sbjct: 176917 cgggttaccgccgggcgccggaga 176940
>gb|AC005960.1|AC005960 Mus musculus chromosome 17 BAC citb20h22 from the MHC region, complete sequence Length = 158414 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 ttgagcttcagcattggtgt 434 |||||||||||||||||||| Sbjct: 116438 ttgagcttcagcattggtgt 116419
>gb|U33117.1|TAU33117 Thermus aquaticus MutS gene, complete cds Length = 3396 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 gccggagatgaaggagaagg 103 |||||||||||||||||||| Sbjct: 1943 gccggagatgaaggagaagg 1962
>emb|CR956641.9| Mouse DNA sequence from clone RP23-77N9 on chromosome 17, complete sequence Length = 202624 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 ttgagcttcagcattggtgt 434 |||||||||||||||||||| Sbjct: 69352 ttgagcttcagcattggtgt 69371
>gb|AC099701.4| Mus musculus chromosome 7, clone RP23-184F6, complete sequence Length = 226167 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gatgaaggagaaggtggagg 109 |||||||||||||||||||| Sbjct: 124282 gatgaaggagaaggtggagg 124263
>emb|AL672174.8| Mouse DNA sequence from clone RP23-408K4 on chromosome X, complete sequence Length = 201642 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 103 gtggaggcctcgtcgatcgacctggaggcggg 134 ||||||||||||| | ||| |||||||||||| Sbjct: 187821 gtggaggcctcgtgggtcgtcctggaggcggg 187790 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,236,978 Number of Sequences: 3902068 Number of extensions: 4236978 Number of successful extensions: 90241 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 89810 Number of HSP's gapped (non-prelim): 420 length of query: 561 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 538 effective length of database: 17,143,297,704 effective search space: 9223094164752 effective search space used: 9223094164752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)