ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd11d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104375.1| Oryza sativa (japonica cultivar-group) cDNA clon... 722 0.0
2dbj|AK099815.1| Oryza sativa (japonica cultivar-group) cDNA clon... 722 0.0
3dbj|AK061385.1| Oryza sativa (japonica cultivar-group) cDNA clon... 722 0.0
4gb|BT017217.1| Zea mays clone EL01N0372E04.c mRNA sequence 458 e-125
5gb|AY105157.1| Zea mays PCO115092 mRNA sequence 331 2e-87
6gb|AY105451.1| Zea mays PCO122767 mRNA sequence 182 9e-43
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
8dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
9gb|AC152498.11| Medicago truncatula clone mth2-38m20, complete s... 54 5e-04
10ref|NM_193865.1| Oryza sativa (japonica cultivar-group), predic... 40 8.2
11emb|AL109612.7|HSJ1018A4 Human DNA sequence from clone RP5-1018A... 40 8.2
12gb|AC134473.4| Mus musculus BAC clone RP23-190G18 from chromosom... 40 8.2
13emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cl... 40 8.2
14emb|AJ605139.1| Actinoplanes teichomyceticus gene cluster for bi... 40 8.2
15gb|AC164439.4| Mus musculus BAC clone RP23-31B24 from chromosome... 40 8.2
16emb|AJ252202.1|DME252202 Drosophila melanogaster D-COQ7 gene for... 40 8.2
17emb|CR382291.11| Zebrafish DNA sequence from clone CH211-245G10,... 40 8.2
18gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 8.2
19gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell... 40 8.2
20ref|NM_132121.2| Drosophila melanogaster shifted CG3135-RA (shf)... 40 8.2
21gb|AY051622.1| Drosophila melanogaster GH27042 full length cDNA 40 8.2
22tpg|BK000323.1| TPA: TPA_exp: Oryza sativa (indica cultivar-grou... 40 8.2
23dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
24dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
25gb|AC068614.5| Homo sapiens BAC clone RP11-512N1 from 2, complet... 40 8.2
26dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
27dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
28emb|AL132709.5|CNS01DTB Human chromosome 14 DNA sequence BAC R-9... 40 8.2
29gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 ... 40 8.2
30emb|AL672005.7| Mouse DNA sequence from clone RP23-401A9 on chro... 40 8.2 
>dbj|AK104375.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G04, full
           insert sequence
          Length = 1133

 Score =  722 bits (364), Expect = 0.0
 Identities = 534/590 (90%), Gaps = 3/590 (0%)
 Strand = Plus / Plus

                                                                       
Query: 16  cggcgcccgccaactcctcctgcttccacccccgcgccgtcgcc---agctcgccctcct 72
           ||||||| || |||||||||||||||||||| ||||||| ||||   ||| ||||||| |
Sbjct: 45  cggcgccggcgaactcctcctgcttccacccgcgcgccgccgccgccagcgcgccctcat 104

                                                                       
Query: 73  ctctcagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagacgaggctcggctcgt 132
           |||||||||||||||||||||||||||||||| ||||||| ||||| | ||| |||||||
Sbjct: 105 ctctcagcgtgggcaccaaggtcttcgtcgggttgaaggcccagaccaagctaggctcgt 164

                                                                       
Query: 133 cagagtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccggagggtct 192
           | ||||||||||||||||| |||| |||| |||||||||||||||||||||||||| |||
Sbjct: 165 cggagtcgtcgtgcccgaatgtcaccgccgggttctacaccgccgtcaaccggaggatct 224

                                                                       
Query: 193 cccttgggttgtcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggca 252
           | || || || ||||||||||||||||||||||| |||||||||||||||||||| || |
Sbjct: 225 ctctgggattatcaaacaagagggctaccagggcgcgcatttcaatgatgcctgttggta 284

                                                                       
Query: 253 caccacgggtaccttacagaacacctggtgaaggaacctggcagtggcttgacatatgga 312
           |||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||
Sbjct: 285 caccacgggtgccttacagaacacctggtgaaggaacttggcaatggcttgatatatgga 344

                                                                       
Query: 313 atgctttatatcgtgaacggattatcttcattggggacaatattgatgaagaattcagta 372
           ||||| ||||||| ||||| ||||||||||||||||||| ||| |||||||| || ||||
Sbjct: 345 atgctctatatcgcgaacgaattatcttcattggggacagtatagatgaagagtttagta 404

                                                                       
Query: 373 accaagtactggcaagcatgctgtatcttgacagtgtcgacgacacaaagaagattcttc 432
           |||||||| |||| |||||| ||||||||||||| || ||  |||| || ||||||||||
Sbjct: 405 accaagtattggcgagcatgttgtatcttgacagcgttgataacactaaaaagattcttc 464

                                                                       
Query: 433 tatacatcaacggtccaggaggagatcttacaccatgcatggcgttatatgataccatgc 492
           ||||||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 465 tatacattaatggtccaggaggagatcttacaccatgcatggcattatatgatacaatgc 524

                                                                       
Query: 493 taagcctaaagagtccaattggtacccattgcctgggctttgcattcaacttggcaggat 552
           |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 525 taagcctaaaaagtcctattggtactcattgcctgggctttgcattcaacttggcaggat 584

                                                             
Query: 553 tcattcttgcagctggtcaaaagggttcacgtactggtatgcctctttgc 602
           | ||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 585 ttattcttgcagctggtgaaaagggttcacgtacgggtatgcctctttgc 634
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>dbj|AK099815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099L17, full
           insert sequence
          Length = 1243

 Score =  722 bits (364), Expect = 0.0
 Identities = 534/590 (90%), Gaps = 3/590 (0%)
 Strand = Plus / Plus

                                                                       
Query: 16  cggcgcccgccaactcctcctgcttccacccccgcgccgtcgcc---agctcgccctcct 72
           ||||||| || |||||||||||||||||||| ||||||| ||||   ||| ||||||| |
Sbjct: 63  cggcgccggcgaactcctcctgcttccacccgcgcgccgccgccgccagcgcgccctcat 122

                                                                       
Query: 73  ctctcagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagacgaggctcggctcgt 132
           |||||||||||||||||||||||||||||||| ||||||| ||||| | ||| |||||||
Sbjct: 123 ctctcagcgtgggcaccaaggtcttcgtcgggttgaaggcccagaccaagctaggctcgt 182

                                                                       
Query: 133 cagagtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccggagggtct 192
           | ||||||||||||||||| |||| |||| |||||||||||||||||||||||||| |||
Sbjct: 183 cggagtcgtcgtgcccgaatgtcaccgccgggttctacaccgccgtcaaccggaggatct 242

                                                                       
Query: 193 cccttgggttgtcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggca 252
           | || || || ||||||||||||||||||||||| |||||||||||||||||||| || |
Sbjct: 243 ctctgggattatcaaacaagagggctaccagggcgcgcatttcaatgatgcctgttggta 302

                                                                       
Query: 253 caccacgggtaccttacagaacacctggtgaaggaacctggcagtggcttgacatatgga 312
           |||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||
Sbjct: 303 caccacgggtgccttacagaacacctggtgaaggaacttggcaatggcttgatatatgga 362

                                                                       
Query: 313 atgctttatatcgtgaacggattatcttcattggggacaatattgatgaagaattcagta 372
           ||||| ||||||| ||||| ||||||||||||||||||| ||| |||||||| || ||||
Sbjct: 363 atgctctatatcgcgaacgaattatcttcattggggacagtatagatgaagagtttagta 422

                                                                       
Query: 373 accaagtactggcaagcatgctgtatcttgacagtgtcgacgacacaaagaagattcttc 432
           |||||||| |||| |||||| ||||||||||||| || ||  |||| || ||||||||||
Sbjct: 423 accaagtattggcgagcatgttgtatcttgacagcgttgataacactaaaaagattcttc 482

                                                                       
Query: 433 tatacatcaacggtccaggaggagatcttacaccatgcatggcgttatatgataccatgc 492
           ||||||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 483 tatacattaatggtccaggaggagatcttacaccatgcatggcattatatgatacaatgc 542

                                                                       
Query: 493 taagcctaaagagtccaattggtacccattgcctgggctttgcattcaacttggcaggat 552
           |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 543 taagcctaaaaagtcctattggtactcattgcctgggctttgcattcaacttggcaggat 602

                                                             
Query: 553 tcattcttgcagctggtcaaaagggttcacgtactggtatgcctctttgc 602
           | ||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 603 ttattcttgcagctggtgaaaagggttcacgtacgggtatgcctctttgc 652
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>dbj|AK061385.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-A01, full
           insert sequence
          Length = 1133

 Score =  722 bits (364), Expect = 0.0
 Identities = 534/590 (90%), Gaps = 3/590 (0%)
 Strand = Plus / Plus

                                                                       
Query: 16  cggcgcccgccaactcctcctgcttccacccccgcgccgtcgcc---agctcgccctcct 72
           ||||||| || |||||||||||||||||||| ||||||| ||||   ||| ||||||| |
Sbjct: 45  cggcgccggcgaactcctcctgcttccacccgcgcgccgccgccgccagcgcgccctcat 104

                                                                       
Query: 73  ctctcagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagacgaggctcggctcgt 132
           |||||||||||||||||||||||||||||||| ||||||| ||||| | ||| |||||||
Sbjct: 105 ctctcagcgtgggcaccaaggtcttcgtcgggttgaaggcccagaccaagctaggctcgt 164

                                                                       
Query: 133 cagagtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccggagggtct 192
           | ||||||||||||||||| |||| |||| |||||||||||||||||||||||||| |||
Sbjct: 165 cggagtcgtcgtgcccgaatgtcaccgccgggttctacaccgccgtcaaccggaggatct 224

                                                                       
Query: 193 cccttgggttgtcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggca 252
           | || || || ||||||||||||||||||||||| |||||||||||||||||||| || |
Sbjct: 225 ctctgggattatcaaacaagagggctaccagggcgcgcatttcaatgatgcctgttggta 284

                                                                       
Query: 253 caccacgggtaccttacagaacacctggtgaaggaacctggcagtggcttgacatatgga 312
           |||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||
Sbjct: 285 caccacgggtgccttacagaacacctggtgaaggaacttggcaatggcttgatatatgga 344

                                                                       
Query: 313 atgctttatatcgtgaacggattatcttcattggggacaatattgatgaagaattcagta 372
           ||||| ||||||| ||||| ||||||||||||||||||| ||| |||||||| || ||||
Sbjct: 345 atgctctatatcgcgaacgaattatcttcattggggacagtatagatgaagagtttagta 404

                                                                       
Query: 373 accaagtactggcaagcatgctgtatcttgacagtgtcgacgacacaaagaagattcttc 432
           |||||||| |||| |||||| ||||||||||||| || ||  |||| || ||||||||||
Sbjct: 405 accaagtattggcgagcatgttgtatcttgacagcgttgataacactaaaaagattcttc 464

                                                                       
Query: 433 tatacatcaacggtccaggaggagatcttacaccatgcatggcgttatatgataccatgc 492
           ||||||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 465 tatacattaatggtccaggaggagatcttacaccatgcatggcattatatgatacaatgc 524

                                                                       
Query: 493 taagcctaaagagtccaattggtacccattgcctgggctttgcattcaacttggcaggat 552
           |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 525 taagcctaaaaagtcctattggtactcattgcctgggctttgcattcaacttggcaggat 584

                                                             
Query: 553 tcattcttgcagctggtcaaaagggttcacgtactggtatgcctctttgc 602
           | ||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 585 ttattcttgcagctggtgaaaagggttcacgtacgggtatgcctctttgc 634
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>gb|BT017217.1| Zea mays clone EL01N0372E04.c mRNA sequence
          Length = 1252

 Score =  458 bits (231), Expect = e-125
 Identities = 495/583 (84%)
 Strand = Plus / Plus

                                                                       
Query: 16  cggcgcccgccaactcctcctgcttccacccccgcgccgtcgccagctcgccctcctctc 75
           ||||||| |||| |||||| ||||||||||| |||||   ||||||| |||| || ||||
Sbjct: 51  cggcgccggccagctcctcatgcttccacccacgcgcgaccgccagcccgccgtcttctc 110

                                                                       
Query: 76  tcagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagacgaggctcggctcgtcag 135
           ||||||| ||||||||||||||||||||||| | ||||||||| | |||||| ||||| |
Sbjct: 111 tcagcgtcggcaccaaggtcttcgtcgggctcagggcgcagaccaagctcggttcgtcgg 170

                                                                       
Query: 136 agtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccggagggtctccc 195
           ||||||| |||||||| |||| |||  ||||| |||| || |||||||||||  |||| |
Sbjct: 171 agtcgtcatgcccgaatgtcagcgctgggttccacactgcggtcaaccggagaatctctc 230

                                                                       
Query: 196 ttgggttgtcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggcacac 255
           |  ||||||| || |||| ||| ||||| || ||||| || ||||||||| | || || |
Sbjct: 231 tcaggttgtccaaaaagaaggcgaccagagcccgcatctcgatgatgcctattggtactc 290

                                                                       
Query: 256 cacgggtaccttacagaacacctggtgaaggaacctggcagtggcttgacatatggaatg 315
           |||| || |||||| ||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 291 cacgtgtgccttaccgaacacctggtgaaggaacctggcaatggcttgacatatggaacg 350

                                                                       
Query: 316 ctttatatcgtgaacggattatcttcattggggacaatattgatgaagaattcagtaacc 375
           || | || ||||| |||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 351 ctctgtaccgtgagcggattatcttcattggggacaatatagatgaagaattcagcaacc 410

                                                                       
Query: 376 aagtactggcaagcatgctgtatcttgacagtgtcgacgacacaaagaagattcttctat 435
           ||||  ||||||||||||| |||||||||||  | ||  |  | || |||||  | ||||
Sbjct: 411 aagtgttggcaagcatgctctatcttgacagcattgataattccaaaaagataatgctat 470

                                                                       
Query: 436 acatcaacggtccaggaggagatcttacaccatgcatggcgttatatgataccatgctaa 495
           |||| || || ||||||||||||||||| || || |||||  ||||||||||||||||||
Sbjct: 471 acattaatggaccaggaggagatcttactccgtgtatggcactatatgataccatgctaa 530

                                                                       
Query: 496 gcctaaagagtccaattggtacccattgcctgggctttgcattcaacttggcaggattca 555
           | ||||| ||||| ||||| || || ||| ||||||||||||||||| ||||||||||||
Sbjct: 531 gtctaaaaagtcctattggcactcactgcttgggctttgcattcaacctggcaggattca 590

                                                      
Query: 556 ttcttgcagctggtcaaaagggttcacgtactggtatgcctct 598
           | |||||||| ||| ||||||||||||| ||||||||||||||
Sbjct: 591 tccttgcagccggtgaaaagggttcacgcactggtatgcctct 633
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>gb|AY105157.1| Zea mays PCO115092 mRNA sequence
          Length = 481

 Score =  331 bits (167), Expect = 2e-87
 Identities = 335/391 (85%)
 Strand = Plus / Plus

                                                                       
Query: 16  cggcgcccgccaactcctcctgcttccacccccgcgccgtcgccagctcgccctcctctc 75
           ||||||| |||| |||||| ||||||||||| |||||   ||||||| |||| || ||||
Sbjct: 54  cggcgccggccagctcctcatgcttccacccacgcgcgaccgccagcccgccgtcttctc 113

                                                                       
Query: 76  tcagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagacgaggctcggctcgtcag 135
           ||||||| ||||||||||||||||||||||| | ||||||||| | |||||| ||||| |
Sbjct: 114 tcagcgtcggcaccaaggtcttcgtcgggctcagggcgcagaccaagctcggttcgtcgg 173

                                                                       
Query: 136 agtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccggagggtctccc 195
           ||||||| |||||||| |||| |||  ||||| |||| || |||||||||||  |||| |
Sbjct: 174 agtcgtcatgcccgaatgtcagcgctgggttccacactgcggtcaaccggagaatctctc 233

                                                                       
Query: 196 ttgggttgtcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggcacac 255
           |  ||||||| || |||| ||| ||||| || ||||| || ||||||||| | || || |
Sbjct: 234 tcaggttgtccaaaaagaaggcgaccagagcccgcatctcgatgatgcctattggtactc 293

                                                                       
Query: 256 cacgggtaccttacagaacacctggtgaaggaacctggcagtggcttgacatatggaatg 315
           |||| || |||||| ||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 294 cacgtgtgccttaccgaacacctggtgaaggaacctggcaatggcttgacatatggaacg 353

                                                                       
Query: 316 ctttatatcgtgaacggattatcttcattggggacaatattgatgaagaattcagtaacc 375
           || | || ||||| |||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 354 ctctgtaccgtgagcggattatcttcattggggacaatatagatgaagaattcagcaacc 413

                                          
Query: 376 aagtactggcaagcatgctgtatcttgacag 406
           ||||  ||||||||||||| |||||||||||
Sbjct: 414 aagtgttggcaagcatgctctatcttgacag 444
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>gb|AY105451.1| Zea mays PCO122767 mRNA sequence
          Length = 709

 Score =  182 bits (92), Expect = 9e-43
 Identities = 200/236 (84%)
 Strand = Plus / Plus

                                                                       
Query: 363 gaattcagtaaccaagtactggcaagcatgctgtatcttgacagtgtcgacgacacaaag 422
           |||||||| ||||||||  ||||||||||||| |||||||||||  | ||  |  | || 
Sbjct: 11  gaattcagcaaccaagtgttggcaagcatgctctatcttgacagcattgataattccaaa 70

                                                                       
Query: 423 aagattcttctatacatcaacggtccaggaggagatcttacaccatgcatggcgttatat 482
           |||||  | |||||||| || || ||||||||||||||||| || || |||||  |||||
Sbjct: 71  aagataatgctatacattaatggaccaggaggagatcttactccgtgtatggcactatat 130

                                                                       
Query: 483 gataccatgctaagcctaaagagtccaattggtacccattgcctgggctttgcattcaac 542
           |||||||||||||| ||||| ||||| ||||| || || ||| |||||||||||||||||
Sbjct: 131 gataccatgctaagtctaaaaagtcctattggcactcactgcttgggctttgcattcaac 190

                                                                   
Query: 543 ttggcaggattcattcttgcagctggtcaaaagggttcacgtactggtatgcctct 598
            ||||||||||||| |||||||| ||| ||||||||||||| ||||||||||||||
Sbjct: 191 ctggcaggattcatccttgcagccggtgaaaagggttcacgcactggtatgcctct 246
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  178 bits (90), Expect = 1e-41
 Identities = 111/118 (94%)
 Strand = Plus / Plus

                                                                           
Query: 459     cttacaccatgcatggcgttatatgataccatgctaagcctaaagagtccaattggtacc 518
               ||||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||| 
Sbjct: 1951074 cttacaccatgcatggcattatatgatacaatgctaagcctaaaaagtcctattggtact 1951133

                                                                         
Query: 519     cattgcctgggctttgcattcaacttggcaggattcattcttgcagctggtcaaaagg 576
               ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 1951134 cattgcctgggctttgcattcaacttggcaggatttattcttgcagctggtgaaaagg 1951191



 Score =  170 bits (86), Expect = 3e-39
 Identities = 107/114 (93%)
 Strand = Plus / Plus

                                                                           
Query: 204     tcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggcacaccacgggta 263
               ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| 
Sbjct: 1949403 tcaaacaagagggctaccagggcgcgcatttcaatgatgcctgttggtacaccacgggtg 1949462

                                                                     
Query: 264     ccttacagaacacctggtgaaggaacctggcagtggcttgacatatggaatgct 317
               |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 1949463 ccttacagaacacctggtgaaggaacttggcaatggcttgatatatggaatgct 1949516



 Score =  139 bits (70), Expect = 1e-29
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                           
Query: 321     tatcgtgaacggattatcttcattggggacaatattgatgaagaattcagtaaccaagta 380
               ||||| ||||| ||||||||||||||||||| ||| |||||||| || ||||||||||||
Sbjct: 1949630 tatcgcgaacgaattatcttcattggggacagtatagatgaagagtttagtaaccaagta 1949689

                                                                           
Query: 381     ctggcaagcatgctgtatcttgacagtgtcgacgacacaaagaagattcttctatacatc 440
                |||| |||||| ||||||||||||| || ||  |||| || ||||||||||||||||| 
Sbjct: 1949690 ttggcgagcatgttgtatcttgacagcgttgataacactaaaaagattcttctatacatt 1949749

                                 
Query: 441     aacggtccaggaggagat 458
               || |||||||||||||||
Sbjct: 1949750 aatggtccaggaggagat 1949767



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                           
Query: 126     ggctcgtcagagtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccgg 185
               |||||||| ||||||||||||||||| |||| |||| |||||||||||||||||||||||
Sbjct: 1948856 ggctcgtcggagtcgtcgtgcccgaatgtcaccgccgggttctacaccgccgtcaaccgg 1948915

                       
Query: 186     agggtctc 193
               ||| ||||
Sbjct: 1948916 aggatctc 1948923



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                         
Query: 77      cagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagac 118
               |||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 1948699 cagcgtgggcaccaaggtcttcgtcgggttgaaggcccagac 1948740



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 58/67 (86%), Gaps = 3/67 (4%)
 Strand = Plus / Plus

                                                                           
Query: 16      cggcgcccgccaactcctcctgcttccacccccg---cgccgtcgccagctcgccctcct 72
               ||||||| || |||||||||||||||||||| ||   ||||| ||||||| ||||||| |
Sbjct: 1948513 cggcgccggcgaactcctcctgcttccacccgcgcgccgccgccgccagcgcgccctcat 1948572

                      
Query: 73      ctctcag 79
               |||||||
Sbjct: 1948573 ctctcag 1948579



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                             
Query: 573     aagggttcacgtactggtatgcctctttgc 602
               |||||||||||||| |||||||||||||||
Sbjct: 1951279 aagggttcacgtacgggtatgcctctttgc 1951308
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>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0548D03
          Length = 156709

 Score =  178 bits (90), Expect = 1e-41
 Identities = 111/118 (94%)
 Strand = Plus / Plus

                                                                         
Query: 459   cttacaccatgcatggcgttatatgataccatgctaagcctaaagagtccaattggtacc 518
             ||||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||| 
Sbjct: 79854 cttacaccatgcatggcattatatgatacaatgctaagcctaaaaagtcctattggtact 79913

                                                                       
Query: 519   cattgcctgggctttgcattcaacttggcaggattcattcttgcagctggtcaaaagg 576
             ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 79914 cattgcctgggctttgcattcaacttggcaggatttattcttgcagctggtgaaaagg 79971



 Score =  170 bits (86), Expect = 3e-39
 Identities = 107/114 (93%)
 Strand = Plus / Plus

                                                                         
Query: 204   tcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggcacaccacgggta 263
             ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| 
Sbjct: 78183 tcaaacaagagggctaccagggcgcgcatttcaatgatgcctgttggtacaccacgggtg 78242

                                                                   
Query: 264   ccttacagaacacctggtgaaggaacctggcagtggcttgacatatggaatgct 317
             |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 78243 ccttacagaacacctggtgaaggaacttggcaatggcttgatatatggaatgct 78296



 Score =  139 bits (70), Expect = 1e-29
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                         
Query: 321   tatcgtgaacggattatcttcattggggacaatattgatgaagaattcagtaaccaagta 380
             ||||| ||||| ||||||||||||||||||| ||| |||||||| || ||||||||||||
Sbjct: 78410 tatcgcgaacgaattatcttcattggggacagtatagatgaagagtttagtaaccaagta 78469

                                                                         
Query: 381   ctggcaagcatgctgtatcttgacagtgtcgacgacacaaagaagattcttctatacatc 440
              |||| |||||| ||||||||||||| || ||  |||| || ||||||||||||||||| 
Sbjct: 78470 ttggcgagcatgttgtatcttgacagcgttgataacactaaaaagattcttctatacatt 78529

                               
Query: 441   aacggtccaggaggagat 458
             || |||||||||||||||
Sbjct: 78530 aatggtccaggaggagat 78547



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                         
Query: 126   ggctcgtcagagtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccgg 185
             |||||||| ||||||||||||||||| |||| |||| |||||||||||||||||||||||
Sbjct: 77636 ggctcgtcggagtcgtcgtgcccgaatgtcaccgccgggttctacaccgccgtcaaccgg 77695

                     
Query: 186   agggtctc 193
             ||| ||||
Sbjct: 77696 aggatctc 77703



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                       
Query: 77    cagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagac 118
             |||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 77479 cagcgtgggcaccaaggtcttcgtcgggttgaaggcccagac 77520



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 58/67 (86%), Gaps = 3/67 (4%)
 Strand = Plus / Plus

                                                                         
Query: 16    cggcgcccgccaactcctcctgcttccacccccg---cgccgtcgccagctcgccctcct 72
             ||||||| || |||||||||||||||||||| ||   ||||| ||||||| ||||||| |
Sbjct: 77293 cggcgccggcgaactcctcctgcttccacccgcgcgccgccgccgccagcgcgccctcat 77352

                    
Query: 73    ctctcag 79
             |||||||
Sbjct: 77353 ctctcag 77359



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 573   aagggttcacgtactggtatgcctctttgc 602
             |||||||||||||| |||||||||||||||
Sbjct: 80059 aagggttcacgtacgggtatgcctctttgc 80088
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>gb|AC152498.11| Medicago truncatula clone mth2-38m20, complete sequence
          Length = 127132

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 270   agaacacctggtgaaggaacctggcagtggcttgacatatggaatgc 316
             |||||||||||||||||||| ||||| ||| ||||  ||||||||||
Sbjct: 37162 agaacacctggtgaaggaacttggcaatgggttgatttatggaatgc 37116



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                  
Query: 357   gatgaagaattcagtaaccaagtactggcaagcatgctgtatcttgacagtgt 409
             ||||||||||| || || ||| || ||||||   |||||||||||||||||||
Sbjct: 36892 gatgaagaattaagcaatcaaatattggcaactttgctgtatcttgacagtgt 36840
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>ref|NM_193865.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 225

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  cgccagctcgccctcctctc 75
           ||||||||||||||||||||
Sbjct: 192 cgccagctcgccctcctctc 173
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>emb|AL109612.7|HSJ1018A4 Human DNA sequence from clone RP5-1018A4 on chromosome 6q12-13 Contains
             part of a novel gene, part of the gene for a novel
             EGF-like domain containing protein and a novel gene,
             complete sequence
          Length = 106273

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   aaagaagattcttctataca 438
             ||||||||||||||||||||
Sbjct: 93371 aaagaagattcttctataca 93390
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>gb|AC134473.4| Mus musculus BAC clone RP23-190G18 from chromosome 3, complete sequence
          Length = 212795

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 517    cccattgcctgggctttgca 536
              ||||||||||||||||||||
Sbjct: 116167 cccattgcctgggctttgca 116148
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>emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cluster
          Length = 89976

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 48    cgcgccgtcgccagctcgccctcc 71
             ||||||||||||||||| ||||||
Sbjct: 79820 cgcgccgtcgccagctccccctcc 79797
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>emb|AJ605139.1| Actinoplanes teichomyceticus gene cluster for biosynthesis of
             glycopeptide antibiotic teicoplanin
          Length = 89713

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 48    cgcgccgtcgccagctcgccctcc 71
             ||||||||||||||||| ||||||
Sbjct: 81638 cgcgccgtcgccagctccccctcc 81615
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>gb|AC164439.4| Mus musculus BAC clone RP23-31B24 from chromosome 3, complete sequence
          Length = 206717

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 517    cccattgcctgggctttgca 536
              ||||||||||||||||||||
Sbjct: 206453 cccattgcctgggctttgca 206472
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>emb|AJ252202.1|DME252202 Drosophila melanogaster D-COQ7 gene for putative COQ7 isologue, exons
            1-3
          Length = 2586

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 212  gagggctaccagggcacgca 231
            ||||||||||||||||||||
Sbjct: 2457 gagggctaccagggcacgca 2438
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>emb|CR382291.11| Zebrafish DNA sequence from clone CH211-245G10, complete sequence
          Length = 159807

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   agtggcttgacatatggaat 314
             ||||||||||||||||||||
Sbjct: 82648 agtggcttgacatatggaat 82629
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 48      cgcgccgtcgccagctcgcc 67
               ||||||||||||||||||||
Sbjct: 1441102 cgcgccgtcgccagctcgcc 1441083
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>gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 191590

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   gagggctaccagggcacgca 231
             ||||||||||||||||||||
Sbjct: 87446 gagggctaccagggcacgca 87427
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>ref|NM_132121.2| Drosophila melanogaster shifted CG3135-RA (shf), mRNA
          Length = 1803

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 212  gagggctaccagggcacgca 231
            ||||||||||||||||||||
Sbjct: 1263 gagggctaccagggcacgca 1282
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>gb|AY051622.1| Drosophila melanogaster GH27042 full length cDNA
          Length = 1802

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 212  gagggctaccagggcacgca 231
            ||||||||||||||||||||
Sbjct: 1263 gagggctaccagggcacgca 1282
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>tpg|BK000323.1| TPA: TPA_exp: Oryza sativa (indica cultivar-group) transposon
            Rim2-M44, complete sequence
          Length = 2086

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   cgccagctcgccctcctctc 75
            ||||||||||||||||||||
Sbjct: 1490 cgccagctcgccctcctctc 1471
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     caactcctcctgcttccacc 45
              ||||||||||||||||||||
Sbjct: 419440 caactcctcctgcttccacc 419459
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 56       cgccagctcgccctcctctc 75
                ||||||||||||||||||||
Sbjct: 15430557 cgccagctcgccctcctctc 15430576
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>gb|AC068614.5| Homo sapiens BAC clone RP11-512N1 from 2, complete sequence
          Length = 164706

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 534    gcattcaacttggcaggatt 553
              ||||||||||||||||||||
Sbjct: 159795 gcattcaacttggcaggatt 159814
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>dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0017C12
          Length = 135356

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    caactcctcctgcttccacc 45
             ||||||||||||||||||||
Sbjct: 15681 caactcctcctgcttccacc 15700
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>dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1045D11
          Length = 142320

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     cgccagctcgccctcctctc 75
              ||||||||||||||||||||
Sbjct: 108098 cgccagctcgccctcctctc 108117
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>emb|AL132709.5|CNS01DTB Human chromosome 14 DNA sequence BAC R-909M7 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 200540

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 541    acttggcaggattcattctt 560
              ||||||||||||||||||||
Sbjct: 122338 acttggcaggattcattctt 122357
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>gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 of 74 of the complete
              sequence
          Length = 299943

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    gagggctaccagggcacgca 231
              ||||||||||||||||||||
Sbjct: 233437 gagggctaccagggcacgca 233418
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>emb|AL672005.7| Mouse DNA sequence from clone RP23-401A9 on chromosome X, complete
             sequence
          Length = 123180

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    caactcctcctgcttccacc 45
             ||||||||||||||||||||
Sbjct: 39066 caactcctcctgcttccacc 39085


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,195,145
Number of Sequences: 3902068
Number of extensions: 4195145
Number of successful extensions: 78798
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78608
Number of HSP's gapped (non-prelim): 187
length of query: 602
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 579
effective length of database: 17,143,297,704
effective search space: 9925969370616
effective search space used: 9925969370616
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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