ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd11d06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MAF1_BRARE (Q6PGU2) Repressor of RNA polymerase III transcriptio... 44 4e-04
2MAF1_MOUSE (Q9D0U6) Repressor of RNA polymerase III transcriptio... 39 0.021
3MAF1_HUMAN (Q9H063) Repressor of RNA polymerase III transcriptio... 39 0.021
4MAF1_CANGA (Q6FIZ7) Repressor of RNA polymerase III transcriptio... 30 7.4

>MAF1_BRARE (Q6PGU2) Repressor of RNA polymerase III transcription MAF1 homolog|
          Length = 247

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 20/44 (45%), Positives = 31/44 (70%)
 Frame = +1

Query: 148 MKLLEYTPFDCVNVFLDQLNLGDCTIRGSLEAFSCKHAGNDRRL 279
           MKLLE + F+ +N  L  +  GDC I G +E++SCK AG+D+++
Sbjct: 1   MKLLENSSFEAINSLLT-IETGDCKIIGRIESYSCKMAGDDKQM 43



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>MAF1_MOUSE (Q9D0U6) Repressor of RNA polymerase III transcription MAF1 homolog|
          Length = 258

 Score = 38.5 bits (88), Expect = 0.021
 Identities = 19/44 (43%), Positives = 29/44 (65%)
 Frame = +1

Query: 148 MKLLEYTPFDCVNVFLDQLNLGDCTIRGSLEAFSCKHAGNDRRL 279
           MKLLE + F+ +N  L  +  GD  I G +E++SCK AG+D+ +
Sbjct: 1   MKLLENSSFEAINSQLT-VETGDAHIIGRIESYSCKMAGDDKHM 43



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>MAF1_HUMAN (Q9H063) Repressor of RNA polymerase III transcription MAF1 homolog|
          Length = 256

 Score = 38.5 bits (88), Expect = 0.021
 Identities = 19/44 (43%), Positives = 29/44 (65%)
 Frame = +1

Query: 148 MKLLEYTPFDCVNVFLDQLNLGDCTIRGSLEAFSCKHAGNDRRL 279
           MKLLE + F+ +N  L  +  GD  I G +E++SCK AG+D+ +
Sbjct: 1   MKLLENSSFEAINSQLT-VETGDAHIIGRIESYSCKMAGDDKHM 43



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>MAF1_CANGA (Q6FIZ7) Repressor of RNA polymerase III transcription MAF1|
          Length = 391

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +1

Query: 148 MKLLEYTPFDCVNVFLDQLNLGDCTIRGSLEAFSCKHAGNDRRLSISLEHEVHT 309
           MK ++    + VN  L+   + DC I G  + F+ K   +DR+L  +++H + T
Sbjct: 1   MKFIDELDIERVNQVLNFETI-DCKIVGGCDIFTTKAVASDRKLYKTIDHHLDT 53


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,872,027
Number of Sequences: 219361
Number of extensions: 1794198
Number of successful extensions: 3134
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3134
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7309604013
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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