ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd11b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 230 4e-57
2emb|AL928743.1|CNS08CBG Oryza sativa chromosome 12, . BAC OSJNBb... 230 4e-57
3dbj|AK073506.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 4e-57
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 230 4e-57
5emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa... 230 4e-57
6emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119... 230 4e-57
7dbj|AK104070.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 1e-54
8ref|NM_106133.1| Arabidopsis thaliana ATP binding / damaged DNA ... 44 0.52
9gb|AC008263.2|F25A4 Arabidopsis thaliana chromosome 1 BAC F25A4 ... 44 0.52
10emb|AL611969.15| Mouse DNA sequence from clone RP23-392K10 on ch... 44 0.52
11ref|NM_191511.1| Oryza sativa (japonica cultivar-group), predic... 42 2.0
12gb|BC027789.1| Mus musculus leucine-rich repeats and calponin ho... 42 2.0
13gb|BC012525.1| Mus musculus leucine-rich repeats and calponin ho... 42 2.0
14ref|NM_007798.1| Mus musculus cathepsin B (Ctsb), mRNA 42 2.0
15gb|AF016606.1| Unidentified bacterium dinitrogenase reductase (n... 42 2.0
16gb|AC090654.38| Mus musculus strain C57BL/6J clone rp23-329p1 ma... 42 2.0
17ref|NM_146164.1| Mus musculus leucine-rich repeats and calponin ... 42 2.0
18ref|XM_963964.1| PREDICTED: Tribolium castaneum similar to CG137... 42 2.0
19gb|AC164561.2| Mus musculus BAC clone RP23-187G5 from chromosome... 42 2.0
20gb|AE005913.1| Caulobacter crescentus CB15 section 239 of 359 of... 42 2.0
21gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 2.0
22dbj|AK151790.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 2.0
23dbj|AK158025.1| Mus musculus adult inner ear cDNA, RIKEN full-le... 42 2.0
24gb|AC149489.2| Medicago truncatula chromosome 2 BAC clone mth2-2... 42 2.0
25gb|S69034.1| preprocathepsin B [mice, B16a melanoma, mRNA, 4738 nt] 42 2.0
26dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
27gb|AC124730.5| Mus musculus chromosome 5 clone RP23-286M3, compl... 42 2.0
28dbj|AK131167.1| Mus musculus premature mRNA for mFLJ00248 protein 42 2.0
29dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
30dbj|AK067606.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
31emb|BX293548.5| Mouse DNA sequence from clone RP23-417K1 on chro... 42 2.0
32emb|CT033780.10| Mouse DNA sequence from clone RP24-329E14 on ch... 42 2.0
33gb|M65270.1|MUSCATHB9 Mouse cathepsin B gene, exon 10 42 2.0
34gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.1
35ref|XM_360432.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 8.1
36gb|AC141563.3| Mus musculus BAC clone RP23-410M22 from chromosom... 40 8.1
37ref|XM_752857.1| Ustilago maydis 521 hypothetical protein (UM018... 40 8.1
38ref|XM_824652.1| Trypanosoma brucei TREU927 hypothetical protein... 40 8.1
39ref|XM_570270.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 8.1
40gb|AC118695.10| Mus musculus chromosome 19, clone RP24-62C10, co... 40 8.1
41gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 8.1
42emb|AJ579894.1|PSP579894 Pseudomonas sp. Y2 paa2 gene cluster fo... 40 8.1
43gb|AC011333.7| Homo sapiens chromosome 5 clone CTC-229L21, compl... 40 8.1
44gb|AC099699.16| Mus musculus chromosome 7, clone RP23-32A8, comp... 40 8.1
45dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 8.1
46emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb... 40 8.1
47dbj|BS000230.1| Pan troglodytes chromosome 22 clone:PTB-105H12, ... 40 8.1
48dbj|AK101013.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
49dbj|AK099985.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
50emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 8.1
51gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 8.1
52emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC OSJNBa... 40 8.1
53gb|AC158219.4| Mus musculus chromosome 8, clone RP23-189N10, com... 40 8.1
54gb|AC161433.5| Mus musculus chromosome 8, clone RP23-50F12, comp... 40 8.1
55gb|M22017.1|LCVWESA Lymphocytic choriomeningitis virus S protein... 40 8.1
56gb|M22138.1|LCVSRNA Lymphocytic choriomeningitis virus S RNA, co... 40 8.1 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  230 bits (116), Expect = 4e-57
 Identities = 359/440 (81%)
 Strand = Plus / Minus

                                                                            
Query: 125      gatacattcacctacagcgccatggtcaactgcctcggaaaagggggccagctcgcggcc 184
                ||||| ||||| ||||| |||||||| || ||||| |||||||| || || || || || 
Sbjct: 27436268 gatactttcacgtacagtgccatggttaattgccttggaaaaggtggtcacctggcagct 27436209

                                                                            
Query: 185      gcctacaagcttttctgcgagatgatcgacaacgggtgcacgcccaacctggtcacctac 244
                || || ||||||||||| |||||| | || || || ||||| || ||||| || || |||
Sbjct: 27436208 gcttataagcttttctgtgagatggttgaaaatggctgcacacctaacctagttacatac 27436149

                                                                            
Query: 245      aacataataattgccctgcaggccaaggcgaggaactatgacaatgtcgtcaagctctac 304
                |||||||| ||||| || |||||||| || || || ||||| ||||| || ||||| |||
Sbjct: 27436148 aacataatgattgctcttcaggccaaagcaagaaattatgaaaatgttgtgaagctgtac 27436089

                                                                            
Query: 305      agagacatgcagatcgctgggttccgccccgacaagataacctacagcatcgtcatggag 364
                |  ||||||||| | || ||||| || || ||||| ||||| ||||| || |||||||| 
Sbjct: 27436088 aaggacatgcaggttgccgggtttcgtcctgacaaaataacatacagtattgtcatggaa 27436029

                                                                            
Query: 365      gttcttggtcactgtggtcacctggacgaggccgaggccgtcttcctcgagatgaggcgc 424
                ||||||||||| |||||||| ||||| ||||| ||||| || ||| | ||||||||||  
Sbjct: 27436028 gttcttggtcattgtggtcatctggatgaggctgaggctgtgttcattgagatgaggcat 27435969

                                                                            
Query: 425      gactgggctcccgatgagcccgtgtacggcctcctggtggacctctggggcaaggccggg 484
                ||||||||||| |||||||| || || || ||  ||||||||||||||||||| || || 
Sbjct: 27435968 gactgggctcctgatgagcctgtatatggtcttttggtggacctctggggcaaagctggc 27435909

                                                                            
Query: 485      aacgtcgacaaggcgttagggtggtaccatgccatgctccaggacggtctgcagcccaat 544
                || || ||||||||  |||| ||||| ||||| ||||| ||||| ||| |||||||||||
Sbjct: 27435908 aatgttgacaaggcactaggatggtatcatgcaatgcttcaggatggtttgcagcccaat 27435849

                                    
Query: 545      gtgcccacctgcaactccct 564
                ||||| |||||||| |||||
Sbjct: 27435848 gtgccgacctgcaattccct 27435829



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 231      acctggtcacctacaacata 250
                ||||||||||||||||||||
Sbjct: 20850929 acctggtcacctacaacata 20850948
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>emb|AL928743.1|CNS08CBG Oryza sativa chromosome 12, . BAC OSJNBb0011N16 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 55237

 Score =  230 bits (116), Expect = 4e-57
 Identities = 359/440 (81%)
 Strand = Plus / Plus

                                                                         
Query: 125   gatacattcacctacagcgccatggtcaactgcctcggaaaagggggccagctcgcggcc 184
             ||||| ||||| ||||| |||||||| || ||||| |||||||| || || || || || 
Sbjct: 45550 gatactttcacgtacagtgccatggttaattgccttggaaaaggtggtcacctggcagct 45609

                                                                         
Query: 185   gcctacaagcttttctgcgagatgatcgacaacgggtgcacgcccaacctggtcacctac 244
             || || ||||||||||| |||||| | || || || ||||| || ||||| || || |||
Sbjct: 45610 gcttataagcttttctgtgagatggttgaaaatggctgcacacctaacctagttacatac 45669

                                                                         
Query: 245   aacataataattgccctgcaggccaaggcgaggaactatgacaatgtcgtcaagctctac 304
             |||||||| ||||| || |||||||| || || || ||||| ||||| || ||||| |||
Sbjct: 45670 aacataatgattgctcttcaggccaaagcaagaaattatgaaaatgttgtgaagctgtac 45729

                                                                         
Query: 305   agagacatgcagatcgctgggttccgccccgacaagataacctacagcatcgtcatggag 364
             |  ||||||||| | || ||||| || || ||||| ||||| ||||| || |||||||| 
Sbjct: 45730 aaggacatgcaggttgccgggtttcgtcctgacaaaataacatacagtattgtcatggaa 45789

                                                                         
Query: 365   gttcttggtcactgtggtcacctggacgaggccgaggccgtcttcctcgagatgaggcgc 424
             ||||||||||| |||||||| ||||| ||||| ||||| || ||| | ||||||||||  
Sbjct: 45790 gttcttggtcattgtggtcatctggatgaggctgaggctgtgttcattgagatgaggcat 45849

                                                                         
Query: 425   gactgggctcccgatgagcccgtgtacggcctcctggtggacctctggggcaaggccggg 484
             ||||||||||| |||||||| || || || ||  ||||||||||||||||||| || || 
Sbjct: 45850 gactgggctcctgatgagcctgtatatggtcttttggtggacctctggggcaaagctggc 45909

                                                                         
Query: 485   aacgtcgacaaggcgttagggtggtaccatgccatgctccaggacggtctgcagcccaat 544
             || || ||||||||  |||| ||||| ||||| ||||| ||||| ||| |||||||||||
Sbjct: 45910 aatgttgacaaggcactaggatggtatcatgcaatgcttcaggatggtttgcagcccaat 45969

                                 
Query: 545   gtgcccacctgcaactccct 564
             ||||| |||||||| |||||
Sbjct: 45970 gtgccgacctgcaattccct 45989
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>dbj|AK073506.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044K21, full
            insert sequence
          Length = 3154

 Score =  230 bits (116), Expect = 4e-57
 Identities = 359/440 (81%)
 Strand = Plus / Plus

                                                                        
Query: 125  gatacattcacctacagcgccatggtcaactgcctcggaaaagggggccagctcgcggcc 184
            ||||| ||||| ||||| |||||||| || ||||| |||||||| || || || || || 
Sbjct: 1780 gatactttcacgtacagtgccatggttaattgccttggaaaaggtggtcacctggcagct 1839

                                                                        
Query: 185  gcctacaagcttttctgcgagatgatcgacaacgggtgcacgcccaacctggtcacctac 244
            || || ||||||||||| |||||| | || || || ||||| || ||||| || || |||
Sbjct: 1840 gcttataagcttttctgtgagatggttgaaaatggctgcacacctaacctagttacatac 1899

                                                                        
Query: 245  aacataataattgccctgcaggccaaggcgaggaactatgacaatgtcgtcaagctctac 304
            |||||||| ||||| || |||||||| || || || ||||| ||||| || ||||| |||
Sbjct: 1900 aacataatgattgctcttcaggccaaagcaagaaattatgaaaatgttgtgaagctgtac 1959

                                                                        
Query: 305  agagacatgcagatcgctgggttccgccccgacaagataacctacagcatcgtcatggag 364
            |  ||||||||| | || ||||| || || ||||| ||||| ||||| || |||||||| 
Sbjct: 1960 aaggacatgcaggttgccgggtttcgtcctgacaaaataacatacagtattgtcatggaa 2019

                                                                        
Query: 365  gttcttggtcactgtggtcacctggacgaggccgaggccgtcttcctcgagatgaggcgc 424
            ||||||||||| |||||||| ||||| ||||| ||||| || ||| | ||||||||||  
Sbjct: 2020 gttcttggtcattgtggtcatctggatgaggctgaggctgtgttcattgagatgaggcat 2079

                                                                        
Query: 425  gactgggctcccgatgagcccgtgtacggcctcctggtggacctctggggcaaggccggg 484
            ||||||||||| |||||||| || || || ||  ||||||||||||||||||| || || 
Sbjct: 2080 gactgggctcctgatgagcctgtatatggtcttttggtggacctctggggcaaagctggc 2139

                                                                        
Query: 485  aacgtcgacaaggcgttagggtggtaccatgccatgctccaggacggtctgcagcccaat 544
            || || ||||||||  |||| ||||| ||||| ||||| ||||| ||| |||||||||||
Sbjct: 2140 aatgttgacaaggcactaggatggtatcatgcaatgcttcaggatggtttgcagcccaat 2199

                                
Query: 545  gtgcccacctgcaactccct 564
            ||||| |||||||| |||||
Sbjct: 2200 gtgccgacctgcaattccct 2219
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  230 bits (116), Expect = 4e-57
 Identities = 359/440 (81%)
 Strand = Plus / Minus

                                                                            
Query: 125      gatacattcacctacagcgccatggtcaactgcctcggaaaagggggccagctcgcggcc 184
                ||||| ||||| ||||| |||||||| || ||||| |||||||| || || || || || 
Sbjct: 27361868 gatactttcacgtacagtgccatggttaattgccttggaaaaggtggtcacctggcagct 27361809

                                                                            
Query: 185      gcctacaagcttttctgcgagatgatcgacaacgggtgcacgcccaacctggtcacctac 244
                || || ||||||||||| |||||| | || || || ||||| || ||||| || || |||
Sbjct: 27361808 gcttataagcttttctgtgagatggttgaaaatggctgcacacctaacctagttacatac 27361749

                                                                            
Query: 245      aacataataattgccctgcaggccaaggcgaggaactatgacaatgtcgtcaagctctac 304
                |||||||| ||||| || |||||||| || || || ||||| ||||| || ||||| |||
Sbjct: 27361748 aacataatgattgctcttcaggccaaagcaagaaattatgaaaatgttgtgaagctgtac 27361689

                                                                            
Query: 305      agagacatgcagatcgctgggttccgccccgacaagataacctacagcatcgtcatggag 364
                |  ||||||||| | || ||||| || || ||||| ||||| ||||| || |||||||| 
Sbjct: 27361688 aaggacatgcaggttgccgggtttcgtcctgacaaaataacatacagtattgtcatggaa 27361629

                                                                            
Query: 365      gttcttggtcactgtggtcacctggacgaggccgaggccgtcttcctcgagatgaggcgc 424
                ||||||||||| |||||||| ||||| ||||| ||||| || ||| | ||||||||||  
Sbjct: 27361628 gttcttggtcattgtggtcatctggatgaggctgaggctgtgttcattgagatgaggcat 27361569

                                                                            
Query: 425      gactgggctcccgatgagcccgtgtacggcctcctggtggacctctggggcaaggccggg 484
                ||||||||||| |||||||| || || || ||  ||||||||||||||||||| || || 
Sbjct: 27361568 gactgggctcctgatgagcctgtatatggtcttttggtggacctctggggcaaagctggc 27361509

                                                                            
Query: 485      aacgtcgacaaggcgttagggtggtaccatgccatgctccaggacggtctgcagcccaat 544
                || || ||||||||  |||| ||||| ||||| ||||| ||||| ||| |||||||||||
Sbjct: 27361508 aatgttgacaaggcactaggatggtatcatgcaatgcttcaggatggtttgcagcccaat 27361449

                                    
Query: 545      gtgcccacctgcaactccct 564
                ||||| |||||||| |||||
Sbjct: 27361448 gtgccgacctgcaattccct 27361429



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 231      acctggtcacctacaacata 250
                ||||||||||||||||||||
Sbjct: 20777143 acctggtcacctacaacata 20777162
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>emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa0063N15 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 109222

 Score =  230 bits (116), Expect = 4e-57
 Identities = 359/440 (81%)
 Strand = Plus / Minus

                                                                         
Query: 125   gatacattcacctacagcgccatggtcaactgcctcggaaaagggggccagctcgcggcc 184
             ||||| ||||| ||||| |||||||| || ||||| |||||||| || || || || || 
Sbjct: 12182 gatactttcacgtacagtgccatggttaattgccttggaaaaggtggtcacctggcagct 12123

                                                                         
Query: 185   gcctacaagcttttctgcgagatgatcgacaacgggtgcacgcccaacctggtcacctac 244
             || || ||||||||||| |||||| | || || || ||||| || ||||| || || |||
Sbjct: 12122 gcttataagcttttctgtgagatggttgaaaatggctgcacacctaacctagttacatac 12063

                                                                         
Query: 245   aacataataattgccctgcaggccaaggcgaggaactatgacaatgtcgtcaagctctac 304
             |||||||| ||||| || |||||||| || || || ||||| ||||| || ||||| |||
Sbjct: 12062 aacataatgattgctcttcaggccaaagcaagaaattatgaaaatgttgtgaagctgtac 12003

                                                                         
Query: 305   agagacatgcagatcgctgggttccgccccgacaagataacctacagcatcgtcatggag 364
             |  ||||||||| | || ||||| || || ||||| ||||| ||||| || |||||||| 
Sbjct: 12002 aaggacatgcaggttgccgggtttcgtcctgacaaaataacatacagtattgtcatggaa 11943

                                                                         
Query: 365   gttcttggtcactgtggtcacctggacgaggccgaggccgtcttcctcgagatgaggcgc 424
             ||||||||||| |||||||| ||||| ||||| ||||| || ||| | ||||||||||  
Sbjct: 11942 gttcttggtcattgtggtcatctggatgaggctgaggctgtgttcattgagatgaggcat 11883

                                                                         
Query: 425   gactgggctcccgatgagcccgtgtacggcctcctggtggacctctggggcaaggccggg 484
             ||||||||||| |||||||| || || || ||  ||||||||||||||||||| || || 
Sbjct: 11882 gactgggctcctgatgagcctgtatatggtcttttggtggacctctggggcaaagctggc 11823

                                                                         
Query: 485   aacgtcgacaaggcgttagggtggtaccatgccatgctccaggacggtctgcagcccaat 544
             || || ||||||||  |||| ||||| ||||| ||||| ||||| ||| |||||||||||
Sbjct: 11822 aatgttgacaaggcactaggatggtatcatgcaatgcttcaggatggtttgcagcccaat 11763

                                 
Query: 545   gtgcccacctgcaactccct 564
             ||||| |||||||| |||||
Sbjct: 11762 gtgccgacctgcaattccct 11743
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>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 124605

 Score =  230 bits (116), Expect = 4e-57
 Identities = 359/440 (81%)
 Strand = Plus / Minus

                                                                          
Query: 125    gatacattcacctacagcgccatggtcaactgcctcggaaaagggggccagctcgcggcc 184
              ||||| ||||| ||||| |||||||| || ||||| |||||||| || || || || || 
Sbjct: 104588 gatactttcacgtacagtgccatggttaattgccttggaaaaggtggtcacctggcagct 104529

                                                                          
Query: 185    gcctacaagcttttctgcgagatgatcgacaacgggtgcacgcccaacctggtcacctac 244
              || || ||||||||||| |||||| | || || || ||||| || ||||| || || |||
Sbjct: 104528 gcttataagcttttctgtgagatggttgaaaatggctgcacacctaacctagttacatac 104469

                                                                          
Query: 245    aacataataattgccctgcaggccaaggcgaggaactatgacaatgtcgtcaagctctac 304
              |||||||| ||||| || |||||||| || || || ||||| ||||| || ||||| |||
Sbjct: 104468 aacataatgattgctcttcaggccaaagcaagaaattatgaaaatgttgtgaagctgtac 104409

                                                                          
Query: 305    agagacatgcagatcgctgggttccgccccgacaagataacctacagcatcgtcatggag 364
              |  ||||||||| | || ||||| || || ||||| ||||| ||||| || |||||||| 
Sbjct: 104408 aaggacatgcaggttgccgggtttcgtcctgacaaaataacatacagtattgtcatggaa 104349

                                                                          
Query: 365    gttcttggtcactgtggtcacctggacgaggccgaggccgtcttcctcgagatgaggcgc 424
              ||||||||||| |||||||| ||||| ||||| ||||| || ||| | ||||||||||  
Sbjct: 104348 gttcttggtcattgtggtcatctggatgaggctgaggctgtgttcattgagatgaggcat 104289

                                                                          
Query: 425    gactgggctcccgatgagcccgtgtacggcctcctggtggacctctggggcaaggccggg 484
              ||||||||||| |||||||| || || || ||  ||||||||||||||||||| || || 
Sbjct: 104288 gactgggctcctgatgagcctgtatatggtcttttggtggacctctggggcaaagctggc 104229

                                                                          
Query: 485    aacgtcgacaaggcgttagggtggtaccatgccatgctccaggacggtctgcagcccaat 544
              || || ||||||||  |||| ||||| ||||| ||||| ||||| ||| |||||||||||
Sbjct: 104228 aatgttgacaaggcactaggatggtatcatgcaatgcttcaggatggtttgcagcccaat 104169

                                  
Query: 545    gtgcccacctgcaactccct 564
              ||||| |||||||| |||||
Sbjct: 104168 gtgccgacctgcaattccct 104149
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>dbj|AK104070.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-A07, full
           insert sequence
          Length = 1899

 Score =  222 bits (112), Expect = 1e-54
 Identities = 358/440 (81%)
 Strand = Plus / Plus

                                                                       
Query: 125 gatacattcacctacagcgccatggtcaactgcctcggaaaagggggccagctcgcggcc 184
           ||||| ||||| ||||| |||||||| || ||||| |||||||| || || || || || 
Sbjct: 510 gatactttcacgtacagtgccatggttaattgccttggaaaaggtggtcacctggcagct 569

                                                                       
Query: 185 gcctacaagcttttctgcgagatgatcgacaacgggtgcacgcccaacctggtcacctac 244
           || || ||||||||||| | |||| | || || || ||||| || ||||| || || |||
Sbjct: 570 gcttataagcttttctgtgggatggttgaaaatggctgcacacctaacctagttacatac 629

                                                                       
Query: 245 aacataataattgccctgcaggccaaggcgaggaactatgacaatgtcgtcaagctctac 304
           |||||||| ||||| || |||||||| || || || ||||| ||||| || ||||| |||
Sbjct: 630 aacataatgattgctcttcaggccaaagcaagaaattatgaaaatgttgtgaagctgtac 689

                                                                       
Query: 305 agagacatgcagatcgctgggttccgccccgacaagataacctacagcatcgtcatggag 364
           |  ||||||||| | || ||||| || || ||||| ||||| ||||| || |||||||| 
Sbjct: 690 aaggacatgcaggttgccgggtttcgtcctgacaaaataacatacagtattgtcatggaa 749

                                                                       
Query: 365 gttcttggtcactgtggtcacctggacgaggccgaggccgtcttcctcgagatgaggcgc 424
           ||||||||||| |||||||| ||||| ||||| ||||| || ||| | ||||||||||  
Sbjct: 750 gttcttggtcattgtggtcatctggatgaggctgaggctgtgttcattgagatgaggcat 809

                                                                       
Query: 425 gactgggctcccgatgagcccgtgtacggcctcctggtggacctctggggcaaggccggg 484
           ||||||||||| |||||||| || || || ||  ||||||||||||||||||| || || 
Sbjct: 810 gactgggctcctgatgagcctgtatatggtcttttggtggacctctggggcaaagctggc 869

                                                                       
Query: 485 aacgtcgacaaggcgttagggtggtaccatgccatgctccaggacggtctgcagcccaat 544
           || || ||||||||  |||| ||||| ||||| ||||| ||||| ||| |||||||||||
Sbjct: 870 aatgttgacaaggcactaggatggtatcatgcaatgcttcaggatggtttgcagcccaat 929

                               
Query: 545 gtgcccacctgcaactccct 564
           ||||| |||||||| |||||
Sbjct: 930 gtgccgacctgcaattccct 949
to top
>ref|NM_106133.1| Arabidopsis thaliana ATP binding / damaged DNA binding AT1G74750
            mRNA, complete cds
          Length = 2568

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                        
Query: 296  aagctctacagagacatgcagatcgctgggttccgccccgacaagataacctacagcatc 355
            |||||||||||||||||||| |  || ||||| |  || |||||  | |||||||| || 
Sbjct: 1558 aagctctacagagacatgcaaaatgccgggtttcaacctgacaaagtgacctacagtatt 1617

                                      
Query: 356  gtcatggaggttcttggtcactgtgg 381
            || |||||||| ||||| ||||||||
Sbjct: 1618 gttatggaggtacttggacactgtgg 1643



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                          
Query: 15   agcctgaccgcgtcacgtactgtacgctgatcgacatccatgctaa 60
            |||||||||| || || |||||||| ||||| || |||||||||||
Sbjct: 1277 agcctgaccgtgtaacttactgtaccctgatagatatccatgctaa 1322
to top
>gb|AC008263.2|F25A4 Arabidopsis thaliana chromosome 1 BAC F25A4 sequence, complete sequence
          Length = 115721

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 15    agcctgaccgcgtcacgtactgtacgctgatcgacatccatgctaa 60
             |||||||||| || || |||||||| ||||| || |||||||||||
Sbjct: 86954 agcctgaccgtgtaacttactgtaccctgatagatatccatgctaa 86909



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                         
Query: 296   aagctctacagagacatgcagatcgctgggttccgccccgacaagataacctacagcatc 355
             |||||||||||||||||||| |  || ||||| |  || |||||  | |||||||| || 
Sbjct: 86673 aagctctacagagacatgcaaaatgccgggtttcaacctgacaaagtgacctacagtatt 86614

                                       
Query: 356   gtcatggaggttcttggtcactgtgg 381
             || |||||||| ||||| ||||||||
Sbjct: 86613 gttatggaggtacttggacactgtgg 86588
to top
>emb|AL611969.15| Mouse DNA sequence from clone RP23-392K10 on chromosome 4, complete
              sequence
          Length = 174305

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 304    cagagacatgcagatcgctgggttcc 329
              |||||||||||||||| |||||||||
Sbjct: 130925 cagagacatgcagatccctgggttcc 130900
to top
>ref|NM_191511.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2055

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 218 gggtgcacgcccaacctggtcacctacaa 246
           ||||||||||||||| | |||||||||||
Sbjct: 628 gggtgcacgcccaacattgtcacctacaa 656
to top
>gb|BC027789.1| Mus musculus leucine-rich repeats and calponin homology (CH) domain
            containing 4, mRNA (cDNA clone IMAGE:5353990), partial
            cds
          Length = 3764

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 521  ctccaggacggtctgcagccc 541
            |||||||||||||||||||||
Sbjct: 1232 ctccaggacggtctgcagccc 1212
to top
>gb|BC012525.1| Mus musculus leucine-rich repeats and calponin homology (CH) domain
            containing 4, mRNA (cDNA clone MGC:19364 IMAGE:2598844),
            complete cds
          Length = 2439

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 521  ctccaggacggtctgcagccc 541
            |||||||||||||||||||||
Sbjct: 1935 ctccaggacggtctgcagccc 1915
to top
>ref|NM_007798.1| Mus musculus cathepsin B (Ctsb), mRNA
          Length = 4748

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 546  tgcccacctgcaactccctcc 566
            |||||||||||||||||||||
Sbjct: 2556 tgcccacctgcaactccctcc 2576
to top
>gb|AF016606.1| Unidentified bacterium dinitrogenase reductase (nifH) gene, partial
           cds
          Length = 327

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 285 acaatgtcgtcaagctctaca 305
           |||||||||||||||||||||
Sbjct: 92  acaatgtcgtcaagctctaca 72
to top
>gb|AC090654.38| Mus musculus strain C57BL/6J clone rp23-329p1 map 14, complete sequence
          Length = 204267

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 546    tgcccacctgcaactccctcc 566
              |||||||||||||||||||||
Sbjct: 144033 tgcccacctgcaactccctcc 144053
to top
>ref|NM_146164.1| Mus musculus leucine-rich repeats and calponin homology (CH) domain
            containing 4 (Lrch4), mRNA
          Length = 2439

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 521  ctccaggacggtctgcagccc 541
            |||||||||||||||||||||
Sbjct: 1935 ctccaggacggtctgcagccc 1915
to top
>ref|XM_963964.1| PREDICTED: Tribolium castaneum similar to CG13776-PA (LOC657508),
           mRNA
          Length = 1422

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 207 tgatcgacaacgggtgcacgcccaa 231
           ||||||| |||||||||||||||||
Sbjct: 653 tgatcgataacgggtgcacgcccaa 677
to top
>gb|AC164561.2| Mus musculus BAC clone RP23-187G5 from chromosome 12, complete sequence
          Length = 210186

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 303   acagagacatgcagatcgctgggtt 327
             ||||||||||||||||| |||||||
Sbjct: 39011 acagagacatgcagatctctgggtt 38987
to top
>gb|AE005913.1| Caulobacter crescentus CB15 section 239 of 359 of the complete genome
          Length = 13785

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 386   ctggacgaggccgaggccgtcttcc 410
             ||||||||||||||||||| |||||
Sbjct: 11526 ctggacgaggccgaggccggcttcc 11550
to top
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 459     tggtggacctctggggcaaggccgg 483
               |||||||| ||||||||||||||||
Sbjct: 3999416 tggtggacatctggggcaaggccgg 3999392
to top
>dbj|AK151790.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830037J06 product:cathepsin B, full
            insert sequence
          Length = 3513

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 546  tgcccacctgcaactccctcc 566
            |||||||||||||||||||||
Sbjct: 2497 tgcccacctgcaactccctcc 2517
to top
>dbj|AK158025.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
            library, clone:F930017I22 product:Similar to leucine-rich
            neuronal protein homolog [Mus musculus], full insert
            sequence
          Length = 4250

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 521  ctccaggacggtctgcagccc 541
            |||||||||||||||||||||
Sbjct: 1963 ctccaggacggtctgcagccc 1943
to top
>gb|AC149489.2| Medicago truncatula chromosome 2 BAC clone mth2-24b4, complete
            sequence
          Length = 110753

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 368  cttggtcactgtggtcacctggacgaggc 396
            ||||||||||||||||| ||||| |||||
Sbjct: 8581 cttggtcactgtggtcaactggatgaggc 8609
to top
>gb|S69034.1| preprocathepsin B [mice, B16a melanoma, mRNA, 4738 nt]
          Length = 4738

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 546  tgcccacctgcaactccctcc 566
            |||||||||||||||||||||
Sbjct: 2546 tgcccacctgcaactccctcc 2566
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 218      gggtgcacgcccaacctggtcacctacaa 246
                ||||||||||||||| | |||||||||||
Sbjct: 33176593 gggtgcacgcccaacattgtcacctacaa 33176621
to top
>gb|AC124730.5| Mus musculus chromosome 5 clone RP23-286M3, complete sequence
          Length = 194040

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 521    ctccaggacggtctgcagccc 541
              |||||||||||||||||||||
Sbjct: 101125 ctccaggacggtctgcagccc 101105
to top
>dbj|AK131167.1| Mus musculus premature mRNA for mFLJ00248 protein
          Length = 4672

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 521  ctccaggacggtctgcagccc 541
            |||||||||||||||||||||
Sbjct: 2155 ctccaggacggtctgcagccc 2135
to top
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1100D10
          Length = 152997

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 218    gggtgcacgcccaacctggtcacctacaa 246
              ||||||||||||||| | |||||||||||
Sbjct: 113503 gggtgcacgcccaacattgtcacctacaa 113531
to top
>dbj|AK067606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112M07, full
           insert sequence
          Length = 2601

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 218 gggtgcacgcccaacctggtcacctacaa 246
           ||||||||||||||| | |||||||||||
Sbjct: 748 gggtgcacgcccaacattgtcacctacaa 776
to top
>emb|BX293548.5| Mouse DNA sequence from clone RP23-417K1 on chromosome 2, complete
              sequence
          Length = 195079

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 304    cagagacatgcagatcgctgg 324
              |||||||||||||||||||||
Sbjct: 103461 cagagacatgcagatcgctgg 103481
to top
>emb|CT033780.10| Mouse DNA sequence from clone RP24-329E14 on chromosome 12, complete
              sequence
          Length = 205515

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 303    acagagacatgcagatcgctgggtt 327
              ||||||||||||||||| |||||||
Sbjct: 121270 acagagacatgcagatctctgggtt 121246
to top
>gb|M65270.1|MUSCATHB9 Mouse cathepsin B gene, exon 10
          Length = 3951

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 546  tgcccacctgcaactccctcc 566
            |||||||||||||||||||||
Sbjct: 1644 tgcccacctgcaactccctcc 1664
to top
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
              sequence
          Length = 1783081

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 72     tggaagtggccatggatctgtacg 95
              |||||||||||||| |||||||||
Sbjct: 455258 tggaagtggccatgcatctgtacg 455235
to top
>ref|XM_360432.1| Magnaporthe grisea 70-15 hypothetical protein (MG10744.4) partial
           mRNA
          Length = 1890

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 387 tggacgaggccgaggccgtc 406
           ||||||||||||||||||||
Sbjct: 560 tggacgaggccgaggccgtc 579
to top
>gb|AC141563.3| Mus musculus BAC clone RP23-410M22 from chromosome 6, complete sequence
          Length = 186983

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    tggaagtggccatggatctg 91
             ||||||||||||||||||||
Sbjct: 35067 tggaagtggccatggatctg 35086
to top
>ref|XM_752857.1| Ustilago maydis 521 hypothetical protein (UM01803.1) partial mRNA
          Length = 2217

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 223 cacgcccaacctggtcacct 242
           ||||||||||||||||||||
Sbjct: 630 cacgcccaacctggtcacct 649
to top
>ref|XM_824652.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.01.8640)
            partial mRNA
          Length = 1887

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 260  ctgcaggccaaggcgaggaa 279
            ||||||||||||||||||||
Sbjct: 1441 ctgcaggccaaggcgaggaa 1460
to top
>ref|XM_570270.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CND01690) partial mRNA
          Length = 2510

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 72   tggaagtggccatggatctgtacg 95
            |||||||||||||| |||||||||
Sbjct: 1222 tggaagtggccatgcatctgtacg 1245
to top
>gb|AC118695.10| Mus musculus chromosome 19, clone RP24-62C10, complete sequence
          Length = 261979

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 364    ggttcttggtcactgtggtcacct 387
              |||||||||||||||||| |||||
Sbjct: 111622 ggttcttggtcactgtggccacct 111645
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 551     acctgcaactccctcctcagcgcc 574
               ||||||||| ||||||||||||||
Sbjct: 2244273 acctgcaacaccctcctcagcgcc 2244250
to top
>emb|AJ579894.1|PSP579894 Pseudomonas sp. Y2 paa2 gene cluster for phenylacetate degradation
          Length = 21562

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   caacctggtcacctacaaca 248
             ||||||||||||||||||||
Sbjct: 17430 caacctggtcacctacaaca 17449
to top
>gb|AC011333.7| Homo sapiens chromosome 5 clone CTC-229L21, complete sequence
          Length = 159964

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 311   atgcagatcgctgggttccgcccc 334
             ||||||||||||||| ||||||||
Sbjct: 61605 atgcagatcgctgggctccgcccc 61582
to top
>gb|AC099699.16| Mus musculus chromosome 7, clone RP23-32A8, complete sequence
          Length = 195263

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 219    ggtgcacgcccaacctggtc 238
              ||||||||||||||||||||
Sbjct: 121418 ggtgcacgcccaacctggtc 121399
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 388     ggacgaggccgaggccgtct 407
               ||||||||||||||||||||
Sbjct: 1470308 ggacgaggccgaggccgtct 1470289
to top
>emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb0046O08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 101075

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   acctggtcacctacaacata 250
             ||||||||||||||||||||
Sbjct: 52659 acctggtcacctacaacata 52678
to top
>dbj|BS000230.1| Pan troglodytes chromosome 22 clone:PTB-105H12, map 22, complete
             sequences
          Length = 242704

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   ccctgcaggccaaggcgagg 277
             ||||||||||||||||||||
Sbjct: 96139 ccctgcaggccaaggcgagg 96158
to top
>dbj|AK101013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149B10, full
           insert sequence
          Length = 1875

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 231 acctggtcacctacaacata 250
           ||||||||||||||||||||
Sbjct: 659 acctggtcacctacaacata 678
to top
>dbj|AK099985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130A06, full
           insert sequence
          Length = 1889

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 231 acctggtcacctacaacata 250
           ||||||||||||||||||||
Sbjct: 659 acctggtcacctacaacata 678
to top
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 229     caacctggtcacctacaaca 248
               ||||||||||||||||||||
Sbjct: 2943356 caacctggtcacctacaaca 2943375
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 229     caacctggtcacctacaaca 248
               ||||||||||||||||||||
Sbjct: 3706357 caacctggtcacctacaaca 3706338
to top
>emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC OSJNBa0036E08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 149022

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    acctggtcacctacaacata 250
              ||||||||||||||||||||
Sbjct: 148770 acctggtcacctacaacata 148789
to top
>gb|AC158219.4| Mus musculus chromosome 8, clone RP23-189N10, complete sequence
          Length = 215819

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 547 gcccacctgcaactccctcc 566
           ||||||||||||||||||||
Sbjct: 503 gcccacctgcaactccctcc 484
to top
>gb|AC161433.5| Mus musculus chromosome 8, clone RP23-50F12, complete sequence
          Length = 253440

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 547    gcccacctgcaactccctcc 566
              ||||||||||||||||||||
Sbjct: 215337 gcccacctgcaactccctcc 215318
to top
>gb|M22017.1|LCVWESA Lymphocytic choriomeningitis virus S protein RNA, complete cds
          Length = 2040

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 552 cctgcaactccctcctcagcgcct 575
           |||||||||||||||||| |||||
Sbjct: 124 cctgcaactccctcctcaacgcct 101
to top
>gb|M22138.1|LCVSRNA Lymphocytic choriomeningitis virus S RNA, complete cds
          Length = 3375

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 552  cctgcaactccctcctcagcgcct 575
            |||||||||||||||||| |||||
Sbjct: 3252 cctgcaactccctcctcaacgcct 3275


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,827,763
Number of Sequences: 3902068
Number of extensions: 3827763
Number of successful extensions: 72504
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72021
Number of HSP's gapped (non-prelim): 483
length of query: 592
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 569
effective length of database: 17,143,297,704
effective search space: 9754536393576
effective search space used: 9754536393576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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