| Clone Name | basd11b07 |
|---|---|
| Clone Library Name | barley_pub |
>MINE_SYNY3 (Q55899) Putative cell division topological specificity factor| Length = 97 Score = 43.1 bits (100), Expect = 7e-04 Identities = 24/77 (31%), Positives = 47/77 (61%) Frame = +3 Query: 309 AKQRLKMILFSDRCEVSDEAKKKIVESVVEALSEFVEIESRDNVQVDISTDAGLGTVYSV 488 A++RLK+++ +DR +S E +++ +VE +S +VEI+ + ++ + +D + T Sbjct: 21 ARRRLKLVIANDRSGLSPEMMEEMRREIVEVVSRYVEIDPGE-MEFSLESDQRM-TALIA 78 Query: 489 TVPVRRVKPEYQESEEQ 539 +PVRRV+ +SE Q Sbjct: 79 NLPVRRVRRTKAKSEAQ 95
>MINE_GUITH (O78435) Putative cell division topological specificity factor| Length = 88 Score = 40.0 bits (92), Expect = 0.006 Identities = 20/66 (30%), Positives = 43/66 (65%) Frame = +3 Query: 312 KQRLKMILFSDRCEVSDEAKKKIVESVVEALSEFVEIESRDNVQVDISTDAGLGTVYSVT 491 K+RLK++L DR ++ +K+ E ++ +S++VE+++ D+++ I TD+ + T Sbjct: 21 KRRLKLVLAHDRSTLNASTLEKMREEILLVVSKYVELDT-DSLEFSIRTDSKM-TALIAN 78 Query: 492 VPVRRV 509 +P+RR+ Sbjct: 79 LPIRRI 84
>YFGG_SCHPO (O13854) Hypothetical serine/threonine-rich protein C19G12.16c| precursor Length = 670 Score = 35.0 bits (79), Expect = 0.20 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = -3 Query: 601 STLPDDSPVSLKSTPTIFPPYCSSDSWYSGFTRRTGTVTEY-TVPRPASVEISTCTLSRD 425 ST + +++ + TI+ SS + + + TGT T+ T+P PAS S T++ Sbjct: 146 STSIPSTAITVTANSTIYSSATSSFPYSTDVSVSTGTSTDIVTLPPPASSTSSFSTITNT 205 Query: 424 SISTNSDSASTTLSTIFFFASS 359 S+ +S S +TT + ++ SS Sbjct: 206 SMIPSSSSFTTTTGSPYYNTSS 227
>MUC2_RAT (Q62635) Mucin-2 precursor (Intestinal mucin 2) (Fragment)| Length = 1513 Score = 34.3 bits (77), Expect = 0.34 Identities = 24/85 (28%), Positives = 36/85 (42%) Frame = -3 Query: 604 TSTLPDDSPVSLKSTPTIFPPYCSSDSWYSGFTRRTGTVTEYTVPRPASVEISTCTLSRD 425 ++T P S ++ +PT P ++ S T T T T P P+ +T Sbjct: 1421 SATSPTTSHITSTVSPTTSPTTSTTSPTTSPTTSTTSPTTSTTSPTPSPTTSTTSPTPSP 1480 Query: 424 SISTNSDSASTTLSTIFFFASSLTS 350 + ST S + S T ST S +TS Sbjct: 1481 TTSTTSPTPSPTTSTTSPTTSPITS 1505
>SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysine-4 specific| SET1 (EC 2.1.1.43) (Set1/Ash2 histone methyltransferase complex subunit SET1) (SET-domain-containing protein 1A) Length = 1707 Score = 33.9 bits (76), Expect = 0.45 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%) Frame = -3 Query: 586 DSPVSLKSTPTIFPPYCSSDSWYSGFTRR-----TGTVTEYTVPRPASVEISTCTLSRDS 422 DS S +T T F P S +S+ F+RR + + T T + ++ + S S Sbjct: 284 DSAYSSSTTSTSFKPRRSENSYQDAFSRRHFSASSASTTASTAIAATTAATASSSASSSS 343 Query: 421 ISTNSDSASTTLSTIF 374 +S++S S+S++ S+ F Sbjct: 344 LSSSSSSSSSSSSSQF 359
>MCR_RAT (P22199) Mineralocorticoid receptor (MR)| Length = 981 Score = 33.1 bits (74), Expect = 0.76 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 3/94 (3%) Frame = -3 Query: 613 SNVTSTLPDDSPVSLKSTPTIFPP-YCSSDSWYSGFTRRTGTVTEYTVPRPASVEISTCT 437 SNV S L SP+S +P PP +CS S S +V PA++ S C+ Sbjct: 255 SNVGSPL--SSPLSSMKSPISSPPSHCSVKSPVSS---PNNVPLRSSVSSPANLNNSRCS 309 Query: 436 LSRDSISTNSDS--ASTTLSTIFFFASSLTSHLS 341 +S S +TN+ S +S T ST+ S +++ S Sbjct: 310 VSSPSNNTNNRSTLSSPTASTVGSIGSPISNAFS 343
>YK82_YEAST (P36170) Hypothetical protein YKR102W precursor| Length = 1169 Score = 33.1 bits (74), Expect = 0.76 Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 12/116 (10%) Frame = -3 Query: 661 ERTRPRNQWFSFGT*KSNVTSTLPDDSPVSLKSTPT----IFPPYCSSDSWYSG------ 512 E T + S T +N TS+ S V + T T PY +S SW S Sbjct: 372 ESTSYVTPYVSSSTAAANYTSSFSSSSEVCTECTETESTSTSTPYVTSSSWSSSEVCTEC 431 Query: 511 -FTRRTGTVTEYTVPRPASVEISTCTLSRDSISTN-SDSASTTLSTIFFFASSLTS 350 T T VT Y A+ ++ S + T +++ ST+ ST + +SS +S Sbjct: 432 TETESTSYVTPYVSSSTAAANYTSSFSSSSEVCTECTETESTSTSTPYVTSSSSSS 487 Score = 31.2 bits (69), Expect = 2.9 Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%) Frame = -3 Query: 661 ERTRPRNQWFSFGT*KSNVTSTLPDDSPVSLKSTPT----IFPPYCSSDSWYSG------ 512 E T + S T +N TS+ S V + T T PY +S SW S Sbjct: 498 ESTSYVTPYVSSSTAAANYTSSFSSSSEVCTECTETESTSTSTPYVTSSSWSSSEVCTEC 557 Query: 511 -FTRRTGTVTEYTVPRPASVEISTCTLSRDSISTN-SDSASTTLSTIFFFASSLTS 350 T T VT Y A+ ++ S + T +++ ST+ ST + +S+ T+ Sbjct: 558 TETESTSYVTPYVSSSTAAANYTSSFSSSSEVCTECTETESTSTSTPYATSSTGTA 613
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 33.1 bits (74), Expect = 0.76 Identities = 23/74 (31%), Positives = 33/74 (44%) Frame = -3 Query: 601 STLPDDSPVSLKSTPTIFPPYCSSDSWYSGFTRRTGTVTEYTVPRPASVEISTCTLSRDS 422 +TLP + + KST T F P SS W T +TVP + +ST + S Sbjct: 4674 TTLPVLTSTATKSTATSFTPIPSSTLW-----------TTWTVPAQTTTPMSTMSTIHTS 4722 Query: 421 ISTNSDSASTTLST 380 + + ST L+T Sbjct: 4723 STPETTHTSTVLTT 4736
>ALA1_CANAL (O13368) Agglutinin-like protein ALA1 precursor (Agglutinin-like| adhesin) Length = 1419 Score = 32.7 bits (73), Expect = 1.00 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 9/98 (9%) Frame = -3 Query: 601 STLPDDSPVSLKSTPTIFPPYCSSDSWYSG------FTRRTGTVTEYTVPRPASV---EI 449 +T+ D+ P + STP+ SSD+ T +T T+ T SV E Sbjct: 1131 TTIEDNEPNTFTSTPSSHSEIFSSDNSVLSKQVDRESTIKTSPTTDVTTVSSLSVHSTEA 1190 Query: 448 STCTLSRDSISTNSDSASTTLSTIFFFASSLTSHLSEN 335 ST TL +S S N S + ++T SS ++H +E+ Sbjct: 1191 STATLGENSFS-NVASTPSNIATSLRSTSSSSNHATES 1227
>ATPF_RICCN (Q92JP3) ATP synthase B chain (EC 3.6.3.14)| Length = 164 Score = 32.0 bits (71), Expect = 1.7 Identities = 19/58 (32%), Positives = 31/58 (53%) Frame = +3 Query: 273 APTIHENTNASIAKQRLKMILFSDRCEVSDEAKKKIVESVVEALSEFVEIESRDNVQV 446 A + ++TNA I K L S E S+E KKI++ + + EF+E + D +Q+ Sbjct: 54 AALLFKHTNAQIKKLET---LRSQMIEDSNEVTKKIIQEKTKEIEEFLEHKKSDAIQL 108
>WSC3_YEAST (Q12215) Cell wall integrity and stress response component 3| precursor Length = 556 Score = 32.0 bits (71), Expect = 1.7 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 3/82 (3%) Frame = -3 Query: 586 DSPVSLKSTPTIFPPYCSSD---SWYSGFTRRTGTVTEYTVPRPASVEISTCTLSRDSIS 416 +S S + + T + P +S + S TRRT T + + +V ++ T S S + Sbjct: 140 ESSSSKEGSSTSYMPSTTSSLSSAQISSTTRRTSTDMKSSEMIATTVSTTSTTSSSTSST 199 Query: 415 TNSDSASTTLSTIFFFASSLTS 350 T+S ++STT ST SS TS Sbjct: 200 TSSTTSSTTSSTTSSTTSSSTS 221
>SGS3_DROYA (P13728) Salivary glue protein Sgs-3 precursor| Length = 263 Score = 31.6 bits (70), Expect = 2.2 Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 13/87 (14%) Frame = -3 Query: 601 STLPDDSPVSLKSTPTIF-------PPYCSSD------SWYSGFTRRTGTVTEYTVPRPA 461 +T+P +P + +T T PP C+ + TRRT T T T RP Sbjct: 38 TTVPTCAPTTTTTTTTTCAPPTRPPPPPCTDAPTTTKRTTEKSTTRRTTTTTRQTTTRPT 97 Query: 460 SVEISTCTLSRDSISTNSDSASTTLST 380 + +T T R + + + +TT +T Sbjct: 98 TTTTTTTTTRRPTTRSTTTRHTTTTTT 124
>PKHD1_HUMAN (Q8TCZ9) Polycystic kidney and hepatic disease 1 precursor| (Fibrocystin) (Polyductin) (Tigmin) Length = 4074 Score = 31.6 bits (70), Expect = 2.2 Identities = 20/68 (29%), Positives = 35/68 (51%) Frame = +3 Query: 306 IAKQRLKMILFSDRCEVSDEAKKKIVESVVEALSEFVEIESRDNVQVDISTDAGLGTVYS 485 I KQ +++L D + +K + VV S FV++ S N + ST + T YS Sbjct: 3404 ICKQTDQVVLILDSADAIWAIQK--LYPVVSVTSGFVDVFSSVNANIPCSTSGSVSTFYS 3461 Query: 486 VTVPVRRV 509 + +P+R++ Sbjct: 3462 I-LPIRQI 3468
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 31.2 bits (69), Expect = 2.9 Identities = 27/78 (34%), Positives = 36/78 (46%) Frame = -3 Query: 613 SNVTSTLPDDSPVSLKSTPTIFPPYCSSDSWYSGFTRRTGTVTEYTVPRPASVEISTCTL 434 + VTST+ + V ST T+ +S S S T T T +T S ST T Sbjct: 284 TTVTSTVTSTTTVPT-STSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTS-STSTT 341 Query: 433 SRDSISTNSDSASTTLST 380 + S + S +STTLST Sbjct: 342 QQSSSTITSSPSSTTLST 359
>UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoordinated protein| 89) Length = 8081 Score = 31.2 bits (69), Expect = 2.9 Identities = 22/90 (24%), Positives = 42/90 (46%) Frame = +3 Query: 363 EAKKKIVESVVEALSEFVEIESRDNVQVDISTDAGLGTVYSVTVPVRRVKPEYQESEEQY 542 E +K I + E S + +++ V I G G +P+R ++ E +E EE+ Sbjct: 7088 EKRKLIPQDKGETPSHSKKEKTQHPVATPILASPG-GDQQQQKIPMRMIRGERREIEEEI 7146 Query: 543 GGKIVGVDFKDTGESSGNVDVTFDFYVPNE 632 +I+ D + G +G++ DF +P + Sbjct: 7147 ANRILS-DISEEGSIAGSLASLEDFEIPKD 7175
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 30.8 bits (68), Expect = 3.8 Identities = 23/91 (25%), Positives = 45/91 (49%) Frame = -3 Query: 613 SNVTSTLPDDSPVSLKSTPTIFPPYCSSDSWYSGFTRRTGTVTEYTVPRPASVEISTCTL 434 SNVT+T+ + ++ TI P +S SGF TV+ T + ++ T + Sbjct: 845 SNVTATITGNVTITTGDLTTIDPTTFTSTYLSSGFQ----TVSNTTATSGSDDDVKTAST 900 Query: 433 SRDSISTNSDSASTTLSTIFFFASSLTSHLS 341 S + T+S S+S++ ++ +S++ L+ Sbjct: 901 SSSTSYTSSSSSSSSTTSAASSKASVSMGLN 931
>MCR_MOUSE (Q8VII8) Mineralocorticoid receptor (MR)| Length = 978 Score = 30.8 bits (68), Expect = 3.8 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 2/93 (2%) Frame = -3 Query: 613 SNVTSTLPDDSPVSLKSTPTIFPP-YCSSDSWYSGFTRRTGTVTEYTVPRPASVEISTCT 437 SNV S L SP+S +P PP +CS S S +V PA++ S C+ Sbjct: 255 SNVGSPL--SSPLSSMKSPISSPPSHCSVKSPVSS---PNNVPLRSSVSSPANLNNSRCS 309 Query: 436 LSRDSISTN-SDSASTTLSTIFFFASSLTSHLS 341 +S S + N S +S T ST+ S +++ S Sbjct: 310 VSSPSNTNNRSTLSSPTASTVGSIGSPISNAFS 342
>GLPO_ENTCA (O86963) Alpha-glycerophosphate oxidase (EC 1.1.3.21)| (Glycerol-3-phosphate oxidase) Length = 608 Score = 30.8 bits (68), Expect = 3.8 Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 12/100 (12%) Frame = +3 Query: 183 VTQDMDGFLHSIVNMGF------LDRLKLAWEIIFPAPTIHENTN------ASIAKQRLK 326 VTQ+ +L +IVN F LD ++ +W + P T + ++ ++ + + Sbjct: 312 VTQEDVDYLLTIVNERFPHAQITLDDIEASWAGLRPLITNNGGSDYNGGGKGKLSDESFE 371 Query: 327 MILFSDRCEVSDEAKKKIVESVVEALSEFVEIESRDNVQV 446 I+ S + ++DE ++ +VE V+ E VE D QV Sbjct: 372 QIVESVKEYLADERQRPVVEKAVKQAQERVEASKVDPSQV 411
>YOJN_ECOLI (P39838) Sensor-like histidine kinase yojN (EC 2.7.13.3)| (Phosphotransfer intermediate yojN) Length = 890 Score = 30.0 bits (66), Expect = 6.5 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +3 Query: 444 VDISTDAGLGTVYSVTVPVRRVKPEYQESEEQ 539 ++I T GLGT YSV + + PE +E EE+ Sbjct: 658 LNIKTRDGLGTRYSVHIKMLAADPEVEEEEER 689
>MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 29.6 bits (65), Expect = 8.4 Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 15/113 (13%) Frame = -3 Query: 484 EYTVPRPASVEISTCTLSRDSIST-------NSDSASTTLSTIFFFASS--LTSHLSE-- 338 E VP P E ST +S S++T NS A TTL TIF +SS TS L++ Sbjct: 451 EVIVPTP---EGSTILVSNASLTTSVPTPVINSTFAPTTLQTIFAVSSSENSTSALADVS 507 Query: 337 ----NRIIFSLCFAILAFVFSCMVGAGKIISQANFRRSRNPILTIL*RKPSMS 191 N II ++ ++ + VGA + + R+ P TI ++ ++S Sbjct: 508 WTQFNIIILTVIIIVVVLLMG-FVGAVYMYREYQNRKLNAPFWTIELKEDNIS 559
>ZBT17_MOUSE (Q60821) Zinc finger and BTB domain-containing protein 17 (Zinc| finger protein 151) (Zinc finger protein 100) (Zfp-100) (Polyomavirus late initiator promoter-binding protein) (LP-1) (Zinc finger protein Z13) Length = 794 Score = 29.6 bits (65), Expect = 8.4 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Frame = +3 Query: 315 QRLKMILFSDRCEVSDEAKKKIVESVVEALSEFVE---IESRDNVQVDISTDAGLGTV 479 Q+ ++ L D V D K ++V+ A SE+ + ++ +D V +DIS AGLG V Sbjct: 16 QQRQLGLLCDCTFVVDGVDFKAHKAVLAACSEYFKMLFVDQKDVVHLDISNAAGLGQV 73
>ZBT17_HUMAN (Q13105) Zinc finger and BTB domain-containing protein 17 (Zinc| finger protein 151) (Myc-interacting zinc finger protein) (Miz-1 protein) Length = 803 Score = 29.6 bits (65), Expect = 8.4 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Frame = +3 Query: 315 QRLKMILFSDRCEVSDEAKKKIVESVVEALSEFVE---IESRDNVQVDISTDAGLGTV 479 Q+ ++ L D V D K ++V+ A SE+ + ++ +D V +DIS AGLG V Sbjct: 16 QQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQKDVVHLDISNAAGLGQV 73
>Y1409_METJA (Q58804) Hypothetical protein MJ1409| Length = 268 Score = 29.6 bits (65), Expect = 8.4 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Frame = +3 Query: 255 WEIIFPAPTIHENTNASIAKQRLKMILFSDRCEVSDEAKKKIVE------SVVEALSEFV 416 + II+P+ NT ++ LK + D DE +KI+E ++E L E V Sbjct: 106 YSIIYPS----NNTTIEFKERVLKWMELED-----DELDEKIIEFDTKMNEILEELLEDV 156 Query: 417 EIESRDNVQVDISTD 461 E+E +V +D+ D Sbjct: 157 EVEEEISVYIDVFMD 171 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,657,073 Number of Sequences: 219361 Number of extensions: 1892990 Number of successful extensions: 6456 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 6153 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6449 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)