| Clone Name | basd11a18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | APLP_MANSE (Q25490) Apolipophorins precursor [Contains: Apolipop... | 32 | 1.1 | 2 | NOC2L_HUMAN (Q9Y3T9) Nucleolar complex protein 2 homolog (NOC2 p... | 31 | 3.2 | 3 | ZN571_PONPY (Q5R5Q6) Zinc finger protein 571 | 30 | 4.2 | 4 | ADA2B_HORSE (O77721) Alpha-2B adrenergic receptor (Alpha-2B adre... | 29 | 9.3 | 5 | PAK1_YEAST (P38990) Serine/threonine-protein kinase PAK1 (EC 2.7... | 29 | 9.3 |
|---|
>APLP_MANSE (Q25490) Apolipophorins precursor [Contains: Apolipophorin-2| (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)] Length = 3305 Score = 32.3 bits (72), Expect = 1.1 Identities = 19/94 (20%), Positives = 43/94 (45%) Frame = +2 Query: 56 VREASSSEREIDVDMQASTSPCERDNNIDLDIHLCSSVDFRIAKDLRSTPSKSRIQPEKS 235 V A ++ID+D++ N+D H+ D+ I +++ + + ++ Sbjct: 1267 VANADVDPKKIDIDIEGQLQDKSAGFNLDARTHIKKEGDYSI--KVKANLNNANLE---- 1320 Query: 236 VKDRASILNLQPANASSHHDTEGLGEETMQGIVM 337 R I+N + +N ++ D +G+G + G V+ Sbjct: 1321 AFSRRDIVNAEKSNVENYIDMKGVGRYELSGFVL 1354
>NOC2L_HUMAN (Q9Y3T9) Nucleolar complex protein 2 homolog (NOC2 protein homolog)| Length = 749 Score = 30.8 bits (68), Expect = 3.2 Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 3/128 (2%) Frame = +2 Query: 125 RDNNIDLDIHLCSSVDFRIAKDLRSTPSKSRIQPEKSVKDRASILNLQPANASSHHDTEG 304 RD I L+I ++ DL K R ++ +DR +L N+S DTEG Sbjct: 626 RDREIQLEISGKERLE-----DLNFPEIKRRKMADRKDEDRKQFKDLFDLNSSEEDDTEG 680 Query: 305 LGEETMQGIVMXXXXXXXXXXXXXHVEFECEEMDDSEDEQAQGTEPCSTTNKG---TSTS 475 E +GI+ ++D E+++ +G E S + G Sbjct: 681 FSE---RGILRPLSTR--------------HGVEDDEEDEEEGEEDSSNSEDGDPDAEAG 723 Query: 476 VACSELQE 499 +A ELQ+ Sbjct: 724 LAPGELQQ 731
>ZN571_PONPY (Q5R5Q6) Zinc finger protein 571| Length = 608 Score = 30.4 bits (67), Expect = 4.2 Identities = 19/66 (28%), Positives = 34/66 (51%) Frame = +2 Query: 116 PCERDNNIDLDIHLCSSVDFRIAKDLRSTPSKSRIQPEKSVKDRASILNLQPANASSHHD 295 P +RD D+ + S++ I+ DL S+ + ++ PEK + + S+ N +HH Sbjct: 25 PAQRDLYRDVMLENYSNL---ISLDLESSCATKKLSPEKEIYEMESLQWENIGNLINHHL 81 Query: 296 TEGLGE 313 GLG+ Sbjct: 82 QYGLGD 87
>ADA2B_HORSE (O77721) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)| (Alpha-2B adrenoreceptor) (Fragment) Length = 389 Score = 29.3 bits (64), Expect = 9.3 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +2 Query: 380 VEFECEEMDDSEDEQAQGTEPCSTTNKGTSTSVACS 487 +E E EE ++ E+E+ +G E C S + ACS Sbjct: 280 LEEEAEEEEEEEEEEEEGEEECEPQALPASPASACS 315
>PAK1_YEAST (P38990) Serine/threonine-protein kinase PAK1 (EC 2.7.11.1)| Length = 1142 Score = 29.3 bits (64), Expect = 9.3 Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 19/116 (16%) Frame = +2 Query: 41 DDQSTVREASSSEREIDVDMQASTSPC-----ERDNNIDLDIHLCSSVDFRIAKD----- 190 DD S+ +SS E D ++ +++S C R+++ + S+ F D Sbjct: 832 DDSSSQSSVTSSGSESDSELSSTSSSCTSGTQSRNSSNNNAYSETESLPFEFGVDSEDGS 891 Query: 191 ---LRSTPSKSR------IQPEKSVKDRASILNLQPANASSHHDTEGLGEETMQGI 331 LR P++ + IQP + +K ++S LNL+P + SS + +E + + Sbjct: 892 GVLLRDLPNEDQIRPFLDIQPCRRMKVKSS-LNLEPPSVSSSSSSSSDEDELILNV 946 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,113,281 Number of Sequences: 219361 Number of extensions: 1467838 Number of successful extensions: 3874 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3763 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3870 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)