ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd11a18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY109809.1| Zea mays CL29132_1 mRNA sequence 172 9e-40
2ref|XM_469234.1| Oryza sativa (japonica cultivar-group), mRNA 151 3e-33
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 151 3e-33
4gb|AC090683.7| Oryza sativa chromosome 3 BAC OSJNBa0035I24 genom... 151 3e-33
5gb|AC116369.5| Oryza sativa chromosome 3 BAC OSJNBb0113I20 genom... 151 3e-33
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
8dbj|AK062507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 3e-33
9gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 151 3e-33
10emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb... 151 3e-33
11emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa... 151 3e-33
12ref|NM_105132.1| Arabidopsis thaliana unknown protein AT1G64570 ... 48 0.034
13gb|AC009519.4|AC009519 Genomic sequence for Arabidopsis thaliana... 48 0.034
14ref|XM_711737.1| Candida albicans SC5314 hypothetical protein (C... 46 0.13
15ref|XM_711677.1| Candida albicans SC5314 hypothetical protein (C... 46 0.13
16emb|BX465854.7| Zebrafish DNA sequence from clone DKEY-208M10 in... 46 0.13
17emb|AL772173.16| Mouse DNA sequence from clone RP23-163P22 on ch... 44 0.53
18gb|AC159996.7| Mus musculus chromosome 5, clone RP23-46J11, comp... 42 2.1
19emb|AL512510.13| Human DNA sequence from clone RP11-537P24 on ch... 42 2.1
20dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
21dbj|AP003951.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
22gb|U79359.1|MGU79359 Meleagris gallopavo microsatellite repeat s... 42 2.1
23gb|AE015451.1| Pseudomonas putida KT2440 complete genome 42 2.1
24gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete se... 40 8.2
25gb|AC130674.7| Mus musculus chromosome 1, clone RP24-98E13, comp... 40 8.2
26ref|XM_643020.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 8.2
27gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's H... 40 8.2
28dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 8.2
29gb|AC099030.1| Drosophila melanogaster, chromosome 2R, region 53... 40 8.2
30gb|AC099021.1| Drosophila melanogaster, chromosome 2R, region 53... 40 8.2
31emb|BX005332.20| Zebrafish DNA sequence from clone CH211-103F14 ... 40 8.2
32gb|AC162378.2| Mus musculus BAC clone RP24-82K1 from chromosome ... 40 8.2
33ref|NM_060322.1| Caenorhabditis elegans Blimp1 (B Lymphocyte-ind... 40 8.2
34emb|BX323454.3| Zebrafish DNA sequence from clone CH211-263F9 in... 40 8.2
35emb|Z78418.1|CEF25D7 Caenorhabditis elegans Cosmid F25D7, comple... 40 8.2
36gb|AE003805.3| Drosophila melanogaster chromosome 2R, section 45... 40 8.2
37gb|AC099713.5| Mus musculus chromosome 15, clone RP23-447B6, com... 40 8.2
38gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 8.2
39emb|BX465226.7| Mouse DNA sequence from clone RP23-447K12 on chr... 40 8.2
40gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 8.2
41gb|AC132105.3| Mus musculus BAC clone RP24-224B9 from 16, comple... 40 8.2
42gb|AC004641.1|AC004641 Drosophila melanogaster DNA sequence (P1s... 40 8.2 
>gb|AY109809.1| Zea mays CL29132_1 mRNA sequence
          Length = 1025

 Score =  172 bits (87), Expect = 9e-40
 Identities = 108/115 (93%)
 Strand = Plus / Minus

                                                                        
Query: 318  caatgcaaggcattgtaatggaacaagaagaattaagtgattccgaagaagagagccagc 377
            |||||||||| ||||||||||| |||||||||||||||||||| || ||||| |||||||
Sbjct: 1016 caatgcaaggaattgtaatggagcaagaagaattaagtgattctgaggaagatagccagc 957

                                                                   
Query: 378  atgttgagtttgaatgtgaggaaatggatgattctgaagatgagcaagctcaggg 432
            |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 956  atgttgagtttgaatgtgaggaaatggatgattctgaagaggagcaagttcaggg 902
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>ref|XM_469234.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4143

 Score =  151 bits (76), Expect = 3e-33
 Identities = 97/104 (93%)
 Strand = Plus / Plus

                                                                        
Query: 311  gaagaaacaatgcaaggcattgtaatggaacaagaagaattaagtgattccgaagaagag 370
            |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| 
Sbjct: 3058 gaagaatcaatgcaaggcattgtaatggaacaagaagaattaagtgattcagaggaagat 3117

                                                        
Query: 371  agccagcatgttgagtttgaatgtgaggaaatggatgattctga 414
            ||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 3118 agccagcatgtcgaatttgaacgtgaggaaatggatgattctga 3161



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                     
Query: 106  atccacaagcccttgtgagagggataacaacattgatttggacattcatttgtgttc 162
            ||||||| |||||||||||| ||| || || ||||| ||||| |||||||| |||||
Sbjct: 2853 atccacaggcccttgtgagaaggaaaataatattgacttggatattcatttatgttc 2909
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  151 bits (76), Expect = 3e-33
 Identities = 97/104 (93%)
 Strand = Plus / Minus

                                                                            
Query: 311      gaagaaacaatgcaaggcattgtaatggaacaagaagaattaagtgattccgaagaagag 370
                |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| 
Sbjct: 26257382 gaagaatcaatgcaaggcattgtaatggaacaagaagaattaagtgattcagaggaagat 26257323

                                                            
Query: 371      agccagcatgttgagtttgaatgtgaggaaatggatgattctga 414
                ||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 26257322 agccagcatgtcgaatttgaacgtgaggaaatggatgattctga 26257279



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                         
Query: 106      atccacaagcccttgtgagagggataacaacattgatttggacattcatttgtgttc 162
                ||||||| |||||||||||| ||| || || ||||| ||||| |||||||| |||||
Sbjct: 26257587 atccacaggcccttgtgagaaggaaaataatattgacttggatattcatttatgttc 26257531
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>gb|AC090683.7| Oryza sativa chromosome 3 BAC OSJNBa0035I24 genomic sequence, complete
              sequence
          Length = 134728

 Score =  151 bits (76), Expect = 3e-33
 Identities = 97/104 (93%)
 Strand = Plus / Plus

                                                                          
Query: 311    gaagaaacaatgcaaggcattgtaatggaacaagaagaattaagtgattccgaagaagag 370
              |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| 
Sbjct: 133298 gaagaatcaatgcaaggcattgtaatggaacaagaagaattaagtgattcagaggaagat 133357

                                                          
Query: 371    agccagcatgttgagtttgaatgtgaggaaatggatgattctga 414
              ||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 133358 agccagcatgtcgaatttgaacgtgaggaaatggatgattctga 133401



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                       
Query: 106    atccacaagcccttgtgagagggataacaacattgatttggacattcatttgtgttc 162
              ||||||| |||||||||||| ||| || || ||||| ||||| |||||||| |||||
Sbjct: 133093 atccacaggcccttgtgagaaggaaaataatattgacttggatattcatttatgttc 133149
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>gb|AC116369.5| Oryza sativa chromosome 3 BAC OSJNBb0113I20 genomic sequence, complete
             sequence
          Length = 122939

 Score =  151 bits (76), Expect = 3e-33
 Identities = 97/104 (93%)
 Strand = Plus / Minus

                                                                         
Query: 311   gaagaaacaatgcaaggcattgtaatggaacaagaagaattaagtgattccgaagaagag 370
             |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| 
Sbjct: 86841 gaagaatcaatgcaaggcattgtaatggaacaagaagaattaagtgattcagaggaagat 86782

                                                         
Query: 371   agccagcatgttgagtttgaatgtgaggaaatggatgattctga 414
             ||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 86781 agccagcatgtcgaatttgaacgtgaggaaatggatgattctga 86738



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                      
Query: 106   atccacaagcccttgtgagagggataacaacattgatttggacattcatttgtgttc 162
             ||||||| |||||||||||| ||| || || ||||| ||||| |||||||| |||||
Sbjct: 87046 atccacaggcccttgtgagaaggaaaataatattgacttggatattcatttatgttc 86990
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  151 bits (76), Expect = 3e-33
 Identities = 97/104 (93%)
 Strand = Plus / Plus

                                                                           
Query: 311     gaagaaacaatgcaaggcattgtaatggaacaagaagaattaagtgattccgaagaagag 370
               |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| 
Sbjct: 2640957 gaagaatcaatgcaaggcattgtaatggaacaagaagaattaagtgattcagaggaagat 2641016

                                                           
Query: 371     agccagcatgttgagtttgaatgtgaggaaatggatgattctga 414
               ||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 2641017 agccagcatgtcgaatttgaacgtgaggaaatggatgattctga 2641060



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                        
Query: 106     atccacaagcccttgtgagagggataacaacattgatttggacattcatttgtgttc 162
               |||||||| ||||||||||| ||| || || ||||| |||||||||||||| |||||
Sbjct: 2640752 atccacaatcccttgtgagaaggaaaataatattgacttggacattcatttatgttc 2640808
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  151 bits (76), Expect = 3e-33
 Identities = 97/104 (93%)
 Strand = Plus / Minus

                                                                            
Query: 311      gaagaaacaatgcaaggcattgtaatggaacaagaagaattaagtgattccgaagaagag 370
                |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| 
Sbjct: 26348691 gaagaatcaatgcaaggcattgtaatggaacaagaagaattaagtgattcagaggaagat 26348632

                                                            
Query: 371      agccagcatgttgagtttgaatgtgaggaaatggatgattctga 414
                ||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 26348631 agccagcatgtcgaatttgaacgtgaggaaatggatgattctga 26348588



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                         
Query: 106      atccacaagcccttgtgagagggataacaacattgatttggacattcatttgtgttc 162
                ||||||| |||||||||||| ||| || || ||||| ||||| |||||||| |||||
Sbjct: 26348896 atccacaggcccttgtgagaaggaaaataatattgacttggatattcatttatgttc 26348840
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>dbj|AK062507.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-B09, full
           insert sequence
          Length = 1048

 Score =  151 bits (76), Expect = 3e-33
 Identities = 97/104 (93%)
 Strand = Plus / Plus

                                                                       
Query: 311 gaagaaacaatgcaaggcattgtaatggaacaagaagaattaagtgattccgaagaagag 370
           |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| 
Sbjct: 97  gaagaatcaatgcaaggcattgtaatggaacaagaagaattaagtgattcagaggaagat 156

                                                       
Query: 371 agccagcatgttgagtttgaatgtgaggaaatggatgattctga 414
           ||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 157 agccagcatgtcgaatttgaacgtgaggaaatggatgattctga 200
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  151 bits (76), Expect = 3e-33
 Identities = 97/104 (93%)
 Strand = Plus / Plus

                                                                           
Query: 311     gaagaaacaatgcaaggcattgtaatggaacaagaagaattaagtgattccgaagaagag 370
               |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| 
Sbjct: 2640901 gaagaatcaatgcaaggcattgtaatggaacaagaagaattaagtgattcagaggaagat 2640960

                                                           
Query: 371     agccagcatgttgagtttgaatgtgaggaaatggatgattctga 414
               ||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 2640961 agccagcatgtcgaatttgaacgtgaggaaatggatgattctga 2641004



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                        
Query: 106     atccacaagcccttgtgagagggataacaacattgatttggacattcatttgtgttc 162
               |||||||| ||||||||||| ||| || || ||||| |||||||||||||| |||||
Sbjct: 2640696 atccacaatcccttgtgagaaggaaaataatattgacttggacattcatttatgttc 2640752
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>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 136490

 Score =  151 bits (76), Expect = 3e-33
 Identities = 97/104 (93%)
 Strand = Plus / Minus

                                                                         
Query: 311   gaagaaacaatgcaaggcattgtaatggaacaagaagaattaagtgattccgaagaagag 370
             |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| 
Sbjct: 27052 gaagaatcaatgcaaggcattgtaatggaacaagaagaattaagtgattcagaggaagat 26993

                                                         
Query: 371   agccagcatgttgagtttgaatgtgaggaaatggatgattctga 414
             ||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 26992 agccagcatgtcgaatttgaacgtgaggaaatggatgattctga 26949



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                      
Query: 106   atccacaagcccttgtgagagggataacaacattgatttggacattcatttgtgttc 162
             |||||||| ||||||||||| ||| || || ||||| |||||||||||||| |||||
Sbjct: 27257 atccacaatcccttgtgagaaggaaaataatattgacttggacattcatttatgttc 27201
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>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 151878

 Score =  151 bits (76), Expect = 3e-33
 Identities = 97/104 (93%)
 Strand = Plus / Plus

                                                                        
Query: 311  gaagaaacaatgcaaggcattgtaatggaacaagaagaattaagtgattccgaagaagag 370
            |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| 
Sbjct: 9883 gaagaatcaatgcaaggcattgtaatggaacaagaagaattaagtgattcagaggaagat 9942

                                                        
Query: 371  agccagcatgttgagtttgaatgtgaggaaatggatgattctga 414
            ||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 9943 agccagcatgtcgaatttgaacgtgaggaaatggatgattctga 9986



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                     
Query: 106  atccacaagcccttgtgagagggataacaacattgatttggacattcatttgtgttc 162
            |||||||| ||||||||||| ||| || || ||||| |||||||||||||| |||||
Sbjct: 9678 atccacaatcccttgtgagaaggaaaataatattgacttggacattcatttatgttc 9734
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>ref|NM_105132.1| Arabidopsis thaliana unknown protein AT1G64570 mRNA, complete cds
          Length = 3720

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 377  catgttgagtttgaatgtgaggaaatggatgattctgaag 416
            |||||||||||||| ||||| || |||| |||||||||||
Sbjct: 3280 catgttgagtttgagtgtgaagagatggctgattctgaag 3319
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>gb|AC009519.4|AC009519 Genomic sequence for Arabidopsis thaliana BAC F1N19 from chromosome I,
             complete sequence
          Length = 113172

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 377   catgttgagtttgaatgtgaggaaatggatgattctgaag 416
             |||||||||||||| ||||| || |||| |||||||||||
Sbjct: 51559 catgttgagtttgagtgtgaagagatggctgattctgaag 51598
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>ref|XM_711737.1| Candida albicans SC5314 hypothetical protein (CaO19_8546), mRNA
          Length = 2085

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 380 gttgagtttgaatgtgaggaaatggat 406
           ||||| |||||||||||||||||||||
Sbjct: 730 gttgaatttgaatgtgaggaaatggat 756
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>ref|XM_711677.1| Candida albicans SC5314 hypothetical protein (CaO19_931), mRNA
          Length = 2085

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 380 gttgagtttgaatgtgaggaaatggat 406
           ||||| |||||||||||||||||||||
Sbjct: 730 gttgaatttgaatgtgaggaaatggat 756
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>emb|BX465854.7| Zebrafish DNA sequence from clone DKEY-208M10 in linkage group 12,
             complete sequence
          Length = 204314

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 320   atgcaaggcattgtaatggaaca 342
             |||||||||||||||||||||||
Sbjct: 81341 atgcaaggcattgtaatggaaca 81319
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>emb|AL772173.16| Mouse DNA sequence from clone RP23-163P22 on chromosome 2, complete
              sequence
          Length = 203185

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 257    ttgaatttacagcctgcaaatgctag 282
              ||||||||| ||||||||||||||||
Sbjct: 113158 ttgaatttagagcctgcaaatgctag 113183
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>gb|AC159996.7| Mus musculus chromosome 5, clone RP23-46J11, complete sequence
          Length = 208036

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 334    aatggaacaagaagaattaagtgat 358
              ||||| |||||||||||||||||||
Sbjct: 102249 aatgggacaagaagaattaagtgat 102273
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>emb|AL512510.13| Human DNA sequence from clone RP11-537P24 on chromosome 6 Contains a CpG
              island, complete sequence
          Length = 170970

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 147    acattcatttgtgttcctcag 167
              |||||||||||||||||||||
Sbjct: 124016 acattcatttgtgttcctcag 124036
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 398      gaaatggatgattctgaagat 418
                |||||||||||||||||||||
Sbjct: 17726027 gaaatggatgattctgaagat 17726007
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>dbj|AP003951.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OJ1288_C01
          Length = 111223

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 398    gaaatggatgattctgaagat 418
              |||||||||||||||||||||
Sbjct: 103925 gaaatggatgattctgaagat 103905
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>gb|U79359.1|MGU79359 Meleagris gallopavo microsatellite repeat sequence
          Length = 300

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 219 ttcagccagaaaagtctgtga 239
           |||||||||||||||||||||
Sbjct: 86  ttcagccagaaaagtctgtga 66
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 434     acagaaccatgttcgactaca 454
               |||||||||||||||||||||
Sbjct: 1967994 acagaaccatgttcgactaca 1967974
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>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence
          Length = 285506

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 510    agtgtcaaacccaacaagga 529
              ||||||||||||||||||||
Sbjct: 282857 agtgtcaaacccaacaagga 282876
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>gb|AC130674.7| Mus musculus chromosome 1, clone RP24-98E13, complete sequence
          Length = 167746

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 484    ttcagagttgcaagaaaaca 503
              ||||||||||||||||||||
Sbjct: 102003 ttcagagttgcaagaaaaca 102022
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>ref|XM_643020.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (562.t00004)
           partial mRNA
          Length = 939

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 ttgtaatggaacaagaagaa 349
           ||||||||||||||||||||
Sbjct: 461 ttgtaatggaacaagaagaa 480
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>gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 147560

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   agagccagcatgttgagttt 388
             ||||||||||||||||||||
Sbjct: 30438 agagccagcatgttgagttt 30419
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 518    acccaacaaggattgaaaca 537
              ||||||||||||||||||||
Sbjct: 777355 acccaacaaggattgaaaca 777336
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>gb|AC099030.1| Drosophila melanogaster, chromosome 2R, region 53F-54X, BAC clone
             BACR09M08, complete sequence
          Length = 179283

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 273   caaatgctagttctcatcatgaca 296
             ||||||||| ||||||||||||||
Sbjct: 36744 caaatgctatttctcatcatgaca 36721
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>gb|AC099021.1| Drosophila melanogaster, chromosome 2R, region 53E-54X, BAC clone
              BACR03E17, complete sequence
          Length = 160338

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 273    caaatgctagttctcatcatgaca 296
              ||||||||| ||||||||||||||
Sbjct: 141393 caaatgctatttctcatcatgaca 141370
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>emb|BX005332.20| Zebrafish DNA sequence from clone CH211-103F14 in linkage group 10,
              complete sequence
          Length = 189101

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    aatttacagcctgcaaatgc 279
              ||||||||||||||||||||
Sbjct: 130357 aatttacagcctgcaaatgc 130376
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>gb|AC162378.2| Mus musculus BAC clone RP24-82K1 from chromosome 16, complete sequence
          Length = 210112

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 466   ttcaacatcagttgcttgtt 485
             ||||||||||||||||||||
Sbjct: 74322 ttcaacatcagttgcttgtt 74303
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>ref|NM_060322.1| Caenorhabditis elegans Blimp1 (B Lymphocyte-induced Maturation
            Protein-1) homolog family member (blmp-1) (blmp-1) mRNA,
            complete cds
          Length = 2454

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 404  gatgattctgaagatgagcaagct 427
            |||| |||||||||||||||||||
Sbjct: 1663 gatgcttctgaagatgagcaagct 1640
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>emb|BX323454.3| Zebrafish DNA sequence from clone CH211-263F9 in linkage group 10,
             complete sequence
          Length = 126181

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   aatttacagcctgcaaatgc 279
             ||||||||||||||||||||
Sbjct: 64803 aatttacagcctgcaaatgc 64822
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>emb|Z78418.1|CEF25D7 Caenorhabditis elegans Cosmid F25D7, complete sequence
          Length = 36490

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 404   gatgattctgaagatgagcaagct 427
             |||| |||||||||||||||||||
Sbjct: 21786 gatgcttctgaagatgagcaagct 21763
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>gb|AE003805.3| Drosophila melanogaster chromosome 2R, section 45 of 73 of the complete
              sequence
          Length = 272948

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 273    caaatgctagttctcatcatgaca 296
              ||||||||| ||||||||||||||
Sbjct: 155241 caaatgctatttctcatcatgaca 155218
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>gb|AC099713.5| Mus musculus chromosome 15, clone RP23-447B6, complete sequence
          Length = 199130

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 333    taatggaacaagaagaatta 352
              ||||||||||||||||||||
Sbjct: 128617 taatggaacaagaagaatta 128636
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 518    acccaacaaggattgaaaca 537
              ||||||||||||||||||||
Sbjct: 809005 acccaacaaggattgaaaca 808986
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>emb|BX465226.7| Mouse DNA sequence from clone RP23-447K12 on chromosome X, complete
             sequence
          Length = 24493

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    gagggaacctccagtagatg 44
             ||||||||||||||||||||
Sbjct: 19884 gagggaacctccagtagatg 19865
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 454     aaataagggaacttcaacat 473
               ||||||||||||||||||||
Sbjct: 2997990 aaataagggaacttcaacat 2997971
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>gb|AC132105.3| Mus musculus BAC clone RP24-224B9 from 16, complete sequence
          Length = 160757

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 466   ttcaacatcagttgcttgtt 485
             ||||||||||||||||||||
Sbjct: 60933 ttcaacatcagttgcttgtt 60952
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>gb|AC004641.1|AC004641 Drosophila melanogaster DNA sequence (P1s DS07321 (D175), DS05993
             (D241), and DS06306 (D173)), complete sequence
          Length = 154985

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 273   caaatgctagttctcatcatgaca 296
             ||||||||| ||||||||||||||
Sbjct: 69053 caaatgctatttctcatcatgaca 69076


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,463,322
Number of Sequences: 3902068
Number of extensions: 5463322
Number of successful extensions: 102953
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102612
Number of HSP's gapped (non-prelim): 341
length of query: 606
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 583
effective length of database: 17,143,297,704
effective search space: 9994542561432
effective search space used: 9994542561432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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