>DHOM_YEAST (P31116) Homoserine dehydrogenase (EC 1.1.1.3) (HDH)|
          Length = 359

 Score = 34.7 bits (78), Expect = 0.10
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +1

Query: 13  VGLQXVPKXSALGRLRGSDNVVEIYSRCYESSPLVIQXXXXXXXXXXXXVLADIIDL 183
           VG++          L+GSDNV+ I ++ Y ++P+VIQ            VL D+I +
Sbjct: 300 VGIEKYDYSHPFASLKGSDNVISIKTKRY-TNPVVIQGAGAGAAVTAAGVLGDVIKI 355

>AK2H_ECOLI (P00562) Bifunctional aspartokinase/homoserine dehydrogenase II|
           (AKII-HDII) [Includes: Aspartokinase II (EC 2.7.2.4);
           Homoserine dehydrogenase II (EC 1.1.1.3)]
          Length = 809

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 21/61 (34%), Positives = 28/61 (45%)
 Frame = +1

Query: 10  RVGLQXVPKXSALGRLRGSDNVVEIYSRCYESSPLVIQXXXXXXXXXXXXVLADIIDLQD 189
           RVG++ V +   L  L   DNV  I SR Y  +PLVI+            + +DI  L  
Sbjct: 748 RVGVEAVREDHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGAIQSDINRLAQ 807

Query: 190 L 192
           L
Sbjct: 808 L 808

>AK1H_SERMA (P27725) Bifunctional aspartokinase/homoserine dehydrogenase I|
           (AKI-HDI) [Includes: Aspartokinase I (EC 2.7.2.4);
           Homoserine dehydrogenase I (EC 1.1.1.3)]
          Length = 819

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +1

Query: 10  RVGLQXVPKXSALGRLRGSDNVVEIYSRCYESSPLVIQXXXXXXXXXXXXVLADII 177
           +V ++ V     L +++  +N +  YSR Y+  PLV++            V AD++
Sbjct: 755 KVRIEAVDGNDPLYKVKNGENALAFYSRYYQPLPLVLRGYGAGNDVTAAGVFADLL 810

>DHOM_SCHPO (O94671) Probable homoserine dehydrogenase (EC 1.1.1.3) (HDH)|
          Length = 376

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 18/67 (26%), Positives = 29/67 (43%)
 Frame = +1

Query: 7   TRVGLQXVPKXSALGRLRGSDNVVEIYSRCYESSPLVIQXXXXXXXXXXXXVLADIIDLQ 186
           T V L+          L+ SDN++   ++ Y + PLV+             VL D+I + 
Sbjct: 306 TLVKLEKYDASHPFANLQSSDNIISFTTKRYHTRPLVVIGAGAGAAVTAAGVLGDMIKI- 364

Query: 187 DLFQTRA 207
            + Q RA
Sbjct: 365 -MSQVRA 370

>AKH1_MAIZE (P49079) Bifunctional aspartokinase/homoserine dehydrogenase 1,|
            chloroplast precursor (AK-HD 1) (AK-HSDH 1) [Includes:
            Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC
            1.1.1.3)]
          Length = 920

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = +1

Query: 10   RVGLQXVPKXSALGRLRGSDNVVEIYSRCYESSPLVIQXXXXXXXXXXXXVLADIIDL 183
            +V L+   +     +L GSDN++   +  Y+  PL+++            V  DI+ L
Sbjct: 855  QVELRAYKRDHPFAQLSGSDNIIAFTTSRYKDQPLIVRGPGAGAEVTAGGVFCDILRL 912

>RMT2_ASPFU (Q4X1R1) Arginine N-methyltransferase 2 (EC 2.1.1.-)|
          Length = 424

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = -3

Query: 342 QINSSQTEPKMFIQP--QTPKPISVQWTLWSIIQLNNQTPWC*TRQ 211
           + +S+ TE K  +Q   +T K +  +  +W+ + LN++TP C  R+
Sbjct: 79  ETSSASTEQKSLVQSAAETVKYLLQEGAIWNDLDLNDETPGCIARR 124

>WHI3_YEAST (P34761) Protein WHI3|
          Length = 661

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
 Frame = -2

Query: 424 FGNICLFSQEMSQSLKGSP-------SAKHHPDLSNQQQPNRTKNVHTASNA---KTNFS 275
           F N    SQ+ SQ  +  P       + KH P   NQQQ N +  + +        +N S
Sbjct: 239 FSNDSPLSQQQSQQQQQQPQQPQQHSTQKHSPQQCNQQQVNSSIPLSSQGQVIGLHSNHS 298

Query: 274 SMDIMVDHTTQ*SNSLVLNKTITLLSGKDLGGRLY 170
             D+ V+ T Q S+   + K+  L    ++  +++
Sbjct: 299 HQDLSVESTIQTSD---IGKSFLLRDNTEINEKIW 330

>YHV5_YEAST (P38851) Hypothetical 143.6 kDa protein in SPO16-REC104 intergenic|
           region
          Length = 1228

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -1

Query: 329 AKQNQKCSYSLKRQNQFQFNGHYGRSYNSIIKLLGAKQDN 210
           AK++  C + L R+ QFQ N    R+ N I  LL  K DN
Sbjct: 826 AKEDASCQFELCRKLQFQLN----RTSNFIKDLLWLKDDN 861

>AKH2_MAIZE (P49080) Bifunctional aspartokinase/homoserine dehydrogenase 2,|
            chloroplast precursor (AK-HD 2) (AK-HSDH 2) [Includes:
            Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC
            1.1.1.3)]
          Length = 917

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = +1

Query: 10   RVGLQXVPKXSALGRLRGSDNVVEIYSRCYESSPLVIQXXXXXXXXXXXXVLADIIDL 183
            +V L+   +     +L GSDN++   +  Y+  PL+++            V  DI+ L
Sbjct: 852  QVELRRYRRDHPFAQLSGSDNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRL 909

>AKH_HAEIN (P44505) Bifunctional aspartokinase/homoserine dehydrogenase|
           (AK-HD) [Includes: Aspartokinase (EC 2.7.2.4);
           Homoserine dehydrogenase (EC 1.1.1.3)]
          Length = 815

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 12/56 (21%), Positives = 27/56 (48%)
 Frame = +1

Query: 10  RVGLQXVPKXSALGRLRGSDNVVEIYSRCYESSPLVIQXXXXXXXXXXXXVLADII 177
           +V +  V   + L +++  +N +  Y+R Y+  PL+++            + ADI+
Sbjct: 755 KVSIVAVDLNNPLYKVKDGENALAFYTRYYQPIPLLLRGYGAGNAVTAAGIFADIL 810

>AK1H_ECOLI (P00561) Bifunctional aspartokinase/homoserine dehydrogenase I|
           (AKI-HDI) [Includes: Aspartokinase I (EC 2.7.2.4);
           Homoserine dehydrogenase I (EC 1.1.1.3)]
          Length = 820

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 14/56 (25%), Positives = 25/56 (44%)
 Frame = +1

Query: 10  RVGLQXVPKXSALGRLRGSDNVVEIYSRCYESSPLVIQXXXXXXXXXXXXVLADII 177
           RV +  V     L +++  +N +  YS  Y+  PLV++            V AD++
Sbjct: 756 RVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAGNDVTAAGVFADLL 811

>KCNQ2_RAT (O88943) Potassium voltage-gated channel subfamily KQT member 2|
           (Voltage-gated potassium channel subunit Kv7.2)
           (Potassium channel alpha subunit KvLQT2) (KQT-like 2)
          Length = 852

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 6/55 (10%)
 Frame = -2

Query: 148 WCRFRLLHPGSPAGSSRSICCISPPHCHFPSISP------VQNXLGLLEGPPSCR 2
           W +    H  SP G   S+  I PP  H  S+S              LEG P+CR
Sbjct: 701 WQQSHQRHGTSPVGDHGSLVRIPPPPAHERSLSAYSGGNRASTEFLRLEGTPACR 755

>UBP11_HUMAN (P51784) Ubiquitin carboxyl-terminal hydrolase 11 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 11)
           (Ubiquitin-specific-processing protease 11)
           (Deubiquitinating enzyme 11)
          Length = 920

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 172 YQRELLRRWCRFRLLHPGSPAGSSRSICCISPPHCHFPSIS 50
           YQR+ + R    RLL P   +G+  S  C SPP   F  ++
Sbjct: 884 YQRQDVAR----RLLSPAGSSGAPASPACSSPPSSEFMDVN 920


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,814,244
Number of Sequences: 219361
Number of extensions: 1170813
Number of successful extensions: 2946
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2946
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)