>dbj|AK099561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034J20, full
           insert sequence
          Length = 1002

 Score =  278 bits (140), Expect = 2e-71
 Identities = 252/290 (86%)
 Strand = Plus / Plus

                                                                       
Query: 209 ggcggtgaccaacgccagcaggaggtgcttgcaaaaatcgccatgcttcagacgcagaag 268
           ||||| ||| |||||||||||||||| ||||| || ||||| ||||||||| ||||||||
Sbjct: 252 ggcggagacaaacgccagcaggaggtccttgcgaagatcgcaatgcttcaggcgcagaag 311

                                                                       
Query: 269 gtccggatcacaaacttcctggacgagcggtctgcttacctgaccaagttcaccaaggac 328
           || || ||||||| |||| |||||||||| ||||||||||||||||||||  | ||||| 
Sbjct: 312 gtgcgcatcacaagcttcttggacgagcgctctgcttacctgaccaagtttgcgaaggat 371

                                                                       
Query: 329 gccgacaccgagttcgacatgattgggcagaacgccatgaaagagctcgatcaaattggg 388
           || ||||||||||||||  ||||||| |||||||||||||||||||| ||| || |||||
Sbjct: 372 gcggacaccgagttcgatctgattggccagaacgccatgaaagagcttgatgaagttggg 431

                                                                       
Query: 389 gaccagataatggagcgtntcgacagcaagatgcagtcctacgaggagacagntgaaatg 448
           ||||||||||||||| |  | ||||||||||||||| |||  |||||||| | |||| | 
Sbjct: 432 gaccagataatggagaggctggacagcaagatgcaggcctttgaggagactgctgaagtt 491

                                                             
Query: 449 caaaggcaggagatagaaatgaatgagagagtgttagaagacttcgaaga 498
           ||||||||||||||||||||||| ||||| ||| | ||||||||||||||
Sbjct: 492 caaaggcaggagatagaaatgaacgagagggtgcttgaagacttcgaaga 541



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                       
Query: 54  aagaggagatgcttactcttaacaccgttcggacatcccttccctcgccgcgcagatcct 113
           ||||||||||||||| |||| ||||| || |||  ||| |||| ||||  | ||||||||
Sbjct: 100 aagaggagatgcttaatcttcacaccattaggatgtccattccttcgctacacagatcct 159

               
Query: 114 cccc 117
           ||||
Sbjct: 160 cccc 163

>gb|AY112109.1| Zea mays CL26172_1 mRNA sequence
          Length = 768

 Score =  250 bits (126), Expect = 4e-63
 Identities = 238/276 (86%)
 Strand = Plus / Minus

                                                                       
Query: 223 ccagcaggaggtgcttgcaaaaatcgccatgcttcagacgcagaaggtccggatcacaaa 282
           |||||||||||| |||||| | |||||||||||||||||||||||||| || |||||| |
Sbjct: 569 ccagcaggaggttcttgcacagatcgccatgcttcagacgcagaaggtgcgcatcacaga 510

                                                                       
Query: 283 cttcctggacgagcggtctgcttacctgaccaagttcaccaaggacgccgacaccgagtt 342
           |||| |||||||||| ||||||||||||||||||||| |||||||||||||| | |||||
Sbjct: 509 cttcttggacgagcgctctgcttacctgaccaagttcgccaaggacgccgactcggagtt 450

                                                                       
Query: 343 cgacatgattgggcagaacgccatgaaagagctcgatcaaattggggaccagataatgga 402
           |||| ||||||||||||||||||||||||| || |||    |||| ||||||||| ||||
Sbjct: 449 cgacctgattgggcagaacgccatgaaagaacttgatgccgttggtgaccagatactgga 390

                                                                       
Query: 403 gcgtntcgacagcaagatgcagtcctacgaggagacagntgaaatgcaaaggcaggagat 462
           | |  ||||||||||||||||  ||| ||||||||| | |||  | ||| |||| |||||
Sbjct: 389 gaggctcgacagcaagatgcaagccttcgaggagacggctgaggtacaacggcaagagat 330

                                               
Query: 463 agaaatgaatgagagagtgttagaagacttcgaaga 498
           ||||||||| || |  |||||||| |||||||||||
Sbjct: 329 agaaatgaacgataaggtgttagaggacttcgaaga 294

>ref|NM_190643.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 597

 Score =  242 bits (122), Expect = 9e-61
 Identities = 216/248 (87%)
 Strand = Plus / Plus

                                                                       
Query: 251 atgcttcagacgcagaaggtccggatcacaaacttcctggacgagcggtctgcttacctg 310
           ||||||||| |||||||||| || ||||||| |||| |||||||||| ||||||||||||
Sbjct: 1   atgcttcaggcgcagaaggtgcgcatcacaagcttcttggacgagcgctctgcttacctg 60

                                                                       
Query: 311 accaagttcaccaaggacgccgacaccgagttcgacatgattgggcagaacgccatgaaa 370
           ||||||||  | ||||| || ||||||||||||||  ||||||| |||||||||||||||
Sbjct: 61  accaagtttgcgaaggatgcggacaccgagttcgatctgattggccagaacgccatgaaa 120

                                                                       
Query: 371 gagctcgatcaaattggggaccagataatggagcgtntcgacagcaagatgcagtcctac 430
           ||||| ||| || |||||||||||||||||||| |  | ||||||||||||||| |||  
Sbjct: 121 gagcttgatgaagttggggaccagataatggagaggctggacagcaagatgcaggccttt 180

                                                                       
Query: 431 gaggagacagntgaaatgcaaaggcaggagatagaaatgaatgagagagtgttagaagac 490
           |||||||| | |||| | ||||||||||||||||||||||| ||||| ||| | ||||||
Sbjct: 181 gaggagactgctgaagttcaaaggcaggagatagaaatgaacgagagggtgcttgaagac 240

                   
Query: 491 ttcgaaga 498
           ||||||||
Sbjct: 241 ttcgaaga 248

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  186 bits (94), Expect = 5e-44
 Identities = 163/186 (87%)
 Strand = Plus / Minus

                                                                            
Query: 209      ggcggtgaccaacgccagcaggaggtgcttgcaaaaatcgccatgcttcagacgcagaag 268
                ||||| ||| |||||||||||||||| ||||| || ||||| ||||||||| ||||||||
Sbjct: 36730209 ggcggagacaaacgccagcaggaggtccttgcgaagatcgcaatgcttcaggcgcagaag 36730150

                                                                            
Query: 269      gtccggatcacaaacttcctggacgagcggtctgcttacctgaccaagttcaccaaggac 328
                || || ||||||| |||| |||||||||| ||||||||||||||||||||  | ||||| 
Sbjct: 36730149 gtgcgcatcacaagcttcttggacgagcgctctgcttacctgaccaagtttgcgaaggat 36730090

                                                                            
Query: 329      gccgacaccgagttcgacatgattgggcagaacgccatgaaagagctcgatcaaattggg 388
                || ||||||||||||||  ||||||| |||||||||||||||||||| ||| || |||||
Sbjct: 36730089 gcggacaccgagttcgatctgattggccagaacgccatgaaagagcttgatgaagttggg 36730030

                      
Query: 389      gaccag 394
                ||||||
Sbjct: 36730029 gaccag 36730024



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 91/106 (85%)
 Strand = Plus / Minus

                                                                            
Query: 393      agataatggagcgtntcgacagcaagatgcagtcctacgaggagacagntgaaatgcaaa 452
                ||||||||||| |  | ||||||||||||||| |||  |||||||| | |||| | ||||
Sbjct: 36729952 agataatggagaggctggacagcaagatgcaggcctttgaggagactgctgaagttcaaa 36729893

                                                              
Query: 453      ggcaggagatagaaatgaatgagagagtgttagaagacttcgaaga 498
                ||||||||||||||||||| ||||| ||| | ||||||||||||||
Sbjct: 36729892 ggcaggagatagaaatgaacgagagggtgcttgaagacttcgaaga 36729847



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                            
Query: 54       aagaggagatgcttactcttaacaccgttcggacatcccttccctcgccgcgcagatcct 113
                ||||||||||||||| |||| ||||| || |||  ||| |||| ||||  | ||||||||
Sbjct: 36730361 aagaggagatgcttaatcttcacaccattaggatgtccattccttcgctacacagatcct 36730302

                    
Query: 114      cccc 117
                ||||
Sbjct: 36730301 cccc 36730298

>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0529E05
          Length = 134982

 Score =  186 bits (94), Expect = 5e-44
 Identities = 163/186 (87%)
 Strand = Plus / Minus

                                                                         
Query: 209   ggcggtgaccaacgccagcaggaggtgcttgcaaaaatcgccatgcttcagacgcagaag 268
             ||||| ||| |||||||||||||||| ||||| || ||||| ||||||||| ||||||||
Sbjct: 56524 ggcggagacaaacgccagcaggaggtccttgcgaagatcgcaatgcttcaggcgcagaag 56465

                                                                         
Query: 269   gtccggatcacaaacttcctggacgagcggtctgcttacctgaccaagttcaccaaggac 328
             || || ||||||| |||| |||||||||| ||||||||||||||||||||  | ||||| 
Sbjct: 56464 gtgcgcatcacaagcttcttggacgagcgctctgcttacctgaccaagtttgcgaaggat 56405

                                                                         
Query: 329   gccgacaccgagttcgacatgattgggcagaacgccatgaaagagctcgatcaaattggg 388
             || ||||||||||||||  ||||||| |||||||||||||||||||| ||| || |||||
Sbjct: 56404 gcggacaccgagttcgatctgattggccagaacgccatgaaagagcttgatgaagttggg 56345

                   
Query: 389   gaccag 394
             ||||||
Sbjct: 56344 gaccag 56339



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 91/106 (85%)
 Strand = Plus / Minus

                                                                         
Query: 393   agataatggagcgtntcgacagcaagatgcagtcctacgaggagacagntgaaatgcaaa 452
             ||||||||||| |  | ||||||||||||||| |||  |||||||| | |||| | ||||
Sbjct: 56267 agataatggagaggctggacagcaagatgcaggcctttgaggagactgctgaagttcaaa 56208

                                                           
Query: 453   ggcaggagatagaaatgaatgagagagtgttagaagacttcgaaga 498
             ||||||||||||||||||| ||||| ||| | ||||||||||||||
Sbjct: 56207 ggcaggagatagaaatgaacgagagggtgcttgaagacttcgaaga 56162



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                         
Query: 54    aagaggagatgcttactcttaacaccgttcggacatcccttccctcgccgcgcagatcct 113
             ||||||||||||||| |||| ||||| || |||  ||| |||| ||||  | ||||||||
Sbjct: 56676 aagaggagatgcttaatcttcacaccattaggatgtccattccttcgctacacagatcct 56617

                 
Query: 114   cccc 117
             ||||
Sbjct: 56616 cccc 56613

>dbj|AK105423.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-C01, full
            insert sequence
          Length = 3098

 Score =  137 bits (69), Expect = 4e-29
 Identities = 120/137 (87%)
 Strand = Plus / Minus

                                                                        
Query: 209  ggcggtgaccaacgccagcaggaggtgcttgcaaaaatcgccatgcttcagacgcagaag 268
            ||||| ||| |||||||||||||||| ||||| || ||||| ||||||||| ||||||||
Sbjct: 2645 ggcggagacaaacgccagcaggaggtccttgcgaagatcgcaatgcttcaggcgcagaag 2586

                                                                        
Query: 269  gtccggatcacaaacttcctggacgagcggtctgcttacctgaccaagttcaccaaggac 328
            || || ||||||| |||| |||||||||| ||||||||||||||||||||  | ||||| 
Sbjct: 2585 gtgcgcatcacaagcttcttggacgagcgctctgcttacctgaccaagtttgcgaaggat 2526

                             
Query: 329  gccgacaccgagttcga 345
            || ||||||||||||||
Sbjct: 2525 gcggacaccgagttcga 2509



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 91/106 (85%)
 Strand = Plus / Minus

                                                                        
Query: 393  agataatggagcgtntcgacagcaagatgcagtcctacgaggagacagntgaaatgcaaa 452
            ||||||||||| |  | ||||||||||||||| |||  |||||||| | |||| | ||||
Sbjct: 2482 agataatggagaggctggacagcaagatgcaggcctttgaggagactgctgaagttcaaa 2423

                                                          
Query: 453  ggcaggagatagaaatgaatgagagagtgttagaagacttcgaaga 498
            ||||||||||||||||||| ||||| ||| | ||||||||||||||
Sbjct: 2422 ggcaggagatagaaatgaacgagagggtgcttgaagacttcgaaga 2377



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                        
Query: 54   aagaggagatgcttactcttaacaccgttcggacatcccttccctcgccgcgcagatcct 113
            ||||||||||||||| |||| ||||| || |||  ||| |||| ||||  | ||||||||
Sbjct: 2797 aagaggagatgcttaatcttcacaccattaggatgtccattccttcgctacacagatcct 2738

                
Query: 114  cccc 117
            ||||
Sbjct: 2737 cccc 2734

>dbj|AK101805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066K09, full
            insert sequence
          Length = 3051

 Score =  137 bits (69), Expect = 4e-29
 Identities = 120/137 (87%)
 Strand = Plus / Minus

                                                                        
Query: 209  ggcggtgaccaacgccagcaggaggtgcttgcaaaaatcgccatgcttcagacgcagaag 268
            ||||| ||| |||||||||||||||| ||||| || ||||| ||||||||| ||||||||
Sbjct: 2609 ggcggagacaaacgccagcaggaggtccttgcgaagatcgcaatgcttcaggcgcagaag 2550

                                                                        
Query: 269  gtccggatcacaaacttcctggacgagcggtctgcttacctgaccaagttcaccaaggac 328
            || || ||||||| |||| |||||||||| ||||||||||||||||||||  | ||||| 
Sbjct: 2549 gtgcgcatcacaagcttcttggacgagcgctctgcttacctgaccaagtttgcgaaggat 2490

                             
Query: 329  gccgacaccgagttcga 345
            || ||||||||||||||
Sbjct: 2489 gcggacaccgagttcga 2473



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 91/106 (85%)
 Strand = Plus / Minus

                                                                        
Query: 393  agataatggagcgtntcgacagcaagatgcagtcctacgaggagacagntgaaatgcaaa 452
            ||||||||||| |  | ||||||||||||||| |||  |||||||| | |||| | ||||
Sbjct: 2461 agataatggagaggctggacagcaagatgcaggcctttgaggagactgctgaagttcaaa 2402

                                                          
Query: 453  ggcaggagatagaaatgaatgagagagtgttagaagacttcgaaga 498
            ||||||||||||||||||| ||||| ||| | ||||||||||||||
Sbjct: 2401 ggcaggagatagaaatgaacgagagggtgcttgaagacttcgaaga 2356



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                        
Query: 54   aagaggagatgcttactcttaacaccgttcggacatcccttccctcgccgcgcagatcct 113
            ||||||||||||||| |||| ||||| || |||  ||| |||| ||||  | ||||||||
Sbjct: 2761 aagaggagatgcttaatcttcacaccattaggatgtccattccttcgctacacagatcct 2702

                
Query: 114  cccc 117
            ||||
Sbjct: 2701 cccc 2698

>gb|AC162890.4| Mus musculus chromosome 3, clone RP23-362E13, complete sequence
          Length = 113095

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 307   cctgaccaagttcaccaaggac 328
             ||||||||||||||||||||||
Sbjct: 38417 cctgaccaagttcaccaaggac 38396

>gb|AC125349.3| Mus musculus BAC clone RP23-394P9 from chromosome 3, complete sequence
          Length = 194060

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 307   cctgaccaagttcaccaaggac 328
             ||||||||||||||||||||||
Sbjct: 41344 cctgaccaagttcaccaaggac 41365

>dbj|AP007284.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT23F02, TM0183,
             complete sequence
          Length = 70173

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 224   cagcaggaggtgcttgcaaaaa 245
             ||||||||||||||||||||||
Sbjct: 15867 cagcaggaggtgcttgcaaaaa 15888

>gb|AC087859.3| Homo sapiens chromosome 3 clone RP11-34L16 map 3p, complete sequence
          Length = 151927

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 43    cccaaagaatcaagaggagat 63
             |||||||||||||||||||||
Sbjct: 84555 cccaaagaatcaagaggagat 84535

>gb|AC145959.3| Gallus gallus chromosome UNK clone CH261-17M10, complete sequence
          Length = 183075

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 127    tgcagtgcatcaaagcagga 146
              ||||||||||||||||||||
Sbjct: 171766 tgcagtgcatcaaagcagga 171785

>ref|XM_390936.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG10760.1)
            partial mRNA
          Length = 2469

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  caagagcagctccgaagatg 182
            ||||||||||||||||||||
Sbjct: 1996 caagagcagctccgaagatg 1977

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 208     cggcggtgaccaacgccagcagga 231
               |||||||||||| |||||||||||
Sbjct: 2704598 cggcggtgaccagcgccagcagga 2704621

>emb|AL033530.1|HS629A15 Human DNA sequence from clone RP4-629A15 on chromosome 1p31.1-31.3
             Contains EST, complete sequence
          Length = 93643

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    aaaagcagcagcataccaaa 40
             ||||||||||||||||||||
Sbjct: 15651 aaaagcagcagcataccaaa 15632

>gb|AC074335.11| Mus Musculus Strain C57BL6/J Chromosome 18 BAC, RP23-127B9, complete
              sequence
          Length = 201643

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 129    cagtgcatcaaagcaggaggagat 152
              ||||| ||||||||||||||||||
Sbjct: 117112 cagtgaatcaaagcaggaggagat 117135

>gb|AE005913.1| Caulobacter crescentus CB15 section 239 of 359 of the complete genome
          Length = 13785

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 310  gaccaagttcaccaaggacgccga 333
            ||||||||||| ||||||||||||
Sbjct: 4339 gaccaagttcagcaaggacgccga 4362

>gb|AC107220.4| Homo sapiens BAC clone RP11-586L23 from 4, complete sequence
          Length = 67392

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 222   gccagcaggaggtgcttgcaaaaa 245
             ||||||||| ||||||||||||||
Sbjct: 59334 gccagcaggtggtgcttgcaaaaa 59357

>gb|AC133565.5| Homo sapiens chromosome 16 clone RP11-895K13, complete sequence
          Length = 168538

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 95     ccctcgccgcgcagatcctccccgcgcc 122
              ||||| ||||||||| ||||||||||||
Sbjct: 138979 ccctccccgcgcagaccctccccgcgcc 139006


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,847,195
Number of Sequences: 3902068
Number of extensions: 3847195
Number of successful extensions: 80978
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80858
Number of HSP's gapped (non-prelim): 119
length of query: 498
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 476
effective length of database: 17,147,199,772
effective search space: 8162067091472
effective search space used: 8162067091472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)