Clone Information

BLAST Search Result

Clone Name	basd1o24
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...	153	2e-37
2	CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...	77	2e-14
3	CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...	76	4e-14
4	CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...	75	1e-13
5	CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...	74	1e-13
6	CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...	74	2e-13
7	CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...	74	2e-13
8	CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...	74	2e-13
9	CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...	73	3e-13
10	CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...	72	5e-13
11	CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...	72	6e-13
12	CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...	72	6e-13
13	CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...	72	8e-13
14	CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...	72	8e-13
15	CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...	72	8e-13
16	CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...	72	8e-13
17	CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...	72	8e-13
18	CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...	71	1e-12
19	CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...	71	1e-12
20	CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...	71	1e-12
21	CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...	71	1e-12
22	CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...	71	1e-12
23	CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...	71	1e-12
24	CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...	71	1e-12
25	CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...	71	1e-12
26	CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...	71	1e-12
27	CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...	71	1e-12
28	CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...	71	1e-12
29	CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...	71	1e-12
30	CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...	71	1e-12
31	CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...	71	1e-12
32	CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...	71	1e-12
33	CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...	71	1e-12
34	CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...	71	1e-12
35	CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...	70	2e-12
36	CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...	70	2e-12
37	CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...	70	2e-12
38	CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...	70	2e-12
39	CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...	69	4e-12
40	CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...	69	5e-12
41	CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...	69	7e-12
42	CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...	68	9e-12
43	CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...	68	1e-11
44	CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...	67	2e-11
45	CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...	67	2e-11
46	CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...	67	2e-11
47	CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...	67	3e-11
48	CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...	67	3e-11
49	CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...	67	3e-11
50	CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...	67	3e-11
51	CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...	67	3e-11
52	CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...	67	3e-11
53	CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...	67	3e-11
54	CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...	67	3e-11
55	CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast...	62	7e-10
56	CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch...	60	2e-09
57	CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop...	60	2e-09
58	CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...	59	4e-09
59	CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla...	59	4e-09
60	CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch...	59	7e-09
61	CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl...	58	9e-09
62	CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop...	54	1e-07
63	CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...	52	5e-07
64	CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...	50	3e-06
65	CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla...	50	3e-06
66	LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre...	46	4e-05
67	CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo...	46	5e-05
68	LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre...	42	0.001
69	CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo...	41	0.001
70	CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo...	40	0.003
71	CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29	37	0.017
72	CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla...	37	0.030
73	FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ...	36	0.039
74	PKHA6_HUMAN (Q9Y2H5) Pleckstrin homology domain-containing famil...	31	1.6
75	NLPD_SALTY (P40827) Lipoprotein nlpD precursor	30	2.8
76	NLPD_SALDU (P39700) Lipoprotein nlpD precursor	30	2.8
77	ADH3_HAEIN (P44557) Putative alcohol dehydrogenase class 3 (EC 1...	30	2.8
78	UBIE_PORGI (Q7MVR7) Menaquinone biosynthesis methyltransferase u...	30	2.8
79	NLPD_SALTI (Q56131) Lipoprotein nlpD precursor	30	2.8
80	SSPO_BOVIN (P98167) SCO-spondin (Fragment)	30	3.6
81	INLA_LISMF (Q723K6) Internalin A precursor	29	4.7
82	PTW3C_BACSU (P39816) Putative PTS system glucosamine-specific EI...	29	6.2
83	AGLU_TETPY (O00906) Lysosomal acid alpha-glucosidase precursor (...	28	8.1
84	INLA_LISMO (P25146) Internalin A precursor	28	8.1

>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score =  153 bits (387), Expect = 2e-37
 Identities = 79/129 (61%), Positives = 93/129 (72%)
 Frame = +1

Query: 64  MAALAPTKMLGTRLDFAGSSRYATAAPTAGAQKIVSLFDRFNXXXXXXXXXXXVATSSAG 243
           MA+L  ++MLGT L+F   SR  ++AP A +         F+           V+ +S  
Sbjct: 1   MASLGVSEMLGTPLNFRAVSR--SSAPLASSPSTFKTVALFSKKKPAPAKSKAVSETS-- 56

Query: 244 IDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFE 423
             DELAKWYGPDRRI+LP+GLLDRSE+PEYLNGEV GDYGYDPFGLGKKPE+FAKYQAFE
Sbjct: 57  --DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFE 114

Query: 424 LIHARWAML 450
           LIHARWAML
Sbjct: 115 LIHARWAML 123

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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 45/107 (42%), Positives = 53/107 (49%)
 Frame = +1

Query: 130 ATAAPTAGAQKIVSLFDRFNXXXXXXXXXXXVATSSAGIDDELAKWYGPDRRIYLPNGLL 309
           A+ A TA +  +V                  VA  SA        WYGPDR  YL     
Sbjct: 2   ASMAATASSTTVVKATPFLGQTKNANPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPF-- 59

Query: 310 DRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAML 450
             ++ P YLNGE PGDYG+D  GL   PE FAK +A E+IH RWAML
Sbjct: 60  -SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAML 105



 Score = 28.9 bits (63), Expect = 6.2
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 337 NGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAM 447
           N   PG   +DP GL   P  FA+ +  E+ + R AM
Sbjct: 185 NDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAM 221

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>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 75.9 bits (185), Expect = 4e-14
 Identities = 34/63 (53%), Positives = 44/63 (69%)
 Frame = +1

Query: 262 KWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARW 441
           ++YGPDR  +L  G    ++ PEYL GE PGDYG+D  GL   P+ FA+Y+  ELIHARW
Sbjct: 32  EFYGPDRAKFL--GPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARW 89

Query: 442 AML 450
           A+L
Sbjct: 90  ALL 92

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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 37/62 (59%), Positives = 42/62 (67%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR +YL  G L   E P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 49  WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 105

Query: 445 ML 450
           ML
Sbjct: 106 ML 107

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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 37/62 (59%), Positives = 41/62 (66%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR +YL  G L   E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 49  WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105

Query: 445 ML 450
           ML
Sbjct: 106 ML 107

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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 38/72 (52%), Positives = 45/72 (62%)
 Frame = +1

Query: 235 SAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQ 414
           +A ID   + WYGPDR +YL        E P YL GE PGDYG+D  GL   PE FAK +
Sbjct: 55  AASID---SPWYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 108

Query: 415 AFELIHARWAML 450
             E+IH+RWAML
Sbjct: 109 ELEVIHSRWAML 120

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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 35/62 (56%), Positives = 41/62 (66%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL       ++ P YLNGE PGDYG+D  GL   PE FA+ +A E+IH RWA
Sbjct: 50  WYGPDRVKYLGPF---SAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 106

Query: 445 ML 450
           ML
Sbjct: 107 ML 108



 Score = 28.5 bits (62), Expect = 8.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 337 NGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAM 447
           N   PG   +DP GL   P  FA+ +  E+ + R AM
Sbjct: 188 NDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAM 224

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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 35/62 (56%), Positives = 40/62 (64%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR +YL        E P YL GE PGDYG+D  GL   PE+FAK +  E+IH RWA
Sbjct: 58  WYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWA 114

Query: 445 ML 450
           ML
Sbjct: 115 ML 116

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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 38/72 (52%), Positives = 45/72 (62%)
 Frame = +1

Query: 235 SAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQ 414
           +A ID   + WYGPDR +YL        E P YL GE PGDYG+D  GL   PE FAK +
Sbjct: 55  AASID---SPWYGPDRVMYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 108

Query: 415 AFELIHARWAML 450
             E+IH+RWAML
Sbjct: 109 ELEVIHSRWAML 120

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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 72.4 bits (176), Expect = 5e-13
 Identities = 38/74 (51%), Positives = 44/74 (59%)
 Frame = +1

Query: 229 TSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAK 408
           T  A + D  + WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK
Sbjct: 38  TVKAPVSD--SPWYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAK 92

Query: 409 YQAFELIHARWAML 450
            +  E+IH+RWAML
Sbjct: 93  NRELEVIHSRWAML 106

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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score = 72.0 bits (175), Expect = 6e-13
 Identities = 34/62 (54%), Positives = 39/62 (62%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        ++P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 49  WYGPDRPKYLGPF---SDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105

Query: 445 ML 450
           ML
Sbjct: 106 ML 107

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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 72.0 bits (175), Expect = 6e-13
 Identities = 37/72 (51%), Positives = 44/72 (61%)
 Frame = +1

Query: 235 SAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQ 414
           SAGI+     WYGPDR  +L       +  P YL GE PGDYG+D  GL   PE F KY+
Sbjct: 34  SAGIE-----WYGPDRAKWLGPF---STNTPAYLTGEFPGDYGWDTAGLSADPETFKKYR 85

Query: 415 AFELIHARWAML 450
             E+IHARWA+L
Sbjct: 86  ELEVIHARWALL 97

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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score = 71.6 bits (174), Expect = 8e-13
 Identities = 36/62 (58%), Positives = 41/62 (66%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYG DR +YL  G L   E P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 49  WYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 105

Query: 445 ML 450
           ML
Sbjct: 106 ML 107

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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 71.6 bits (174), Expect = 8e-13
 Identities = 35/62 (56%), Positives = 38/62 (61%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 50  WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 106

Query: 445 ML 450
           ML
Sbjct: 107 ML 108

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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score = 71.6 bits (174), Expect = 8e-13
 Identities = 36/62 (58%), Positives = 41/62 (66%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYG DR +YL  G L   E P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 45  WYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 101

Query: 445 ML 450
           ML
Sbjct: 102 ML 103

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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 71.6 bits (174), Expect = 8e-13
 Identities = 35/62 (56%), Positives = 38/62 (61%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 51  WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107

Query: 445 ML 450
           ML
Sbjct: 108 ML 109

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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 71.6 bits (174), Expect = 8e-13
 Identities = 35/62 (56%), Positives = 38/62 (61%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 51  WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107

Query: 445 ML 450
           ML
Sbjct: 108 ML 109

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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 33/62 (53%), Positives = 40/62 (64%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        ++P YL GE PGDYG+D  GL   PE FA+ +  E+IH+RWA
Sbjct: 49  WYGPDRPKYLGPF---SEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 105

Query: 445 ML 450
           ML
Sbjct: 106 ML 107

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>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 36/62 (58%), Positives = 40/62 (64%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYG DR +YL  G L   E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 50  WYGSDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 106

Query: 445 ML 450
           ML
Sbjct: 107 ML 108

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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 45/111 (40%), Positives = 53/111 (47%)
 Frame = +1

Query: 118 SSRYATAAPTAGAQKIVSLFDRFNXXXXXXXXXXXVATSSAGIDDELAKWYGPDRRIYLP 297
           +S  A ++P AG  K V L    +              S A      + WYGPDR  YL 
Sbjct: 3   ASTTALSSPFAG--KAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLG 60

Query: 298 NGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAML 450
                  E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWAML
Sbjct: 61  PF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 108

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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 35/62 (56%), Positives = 39/62 (62%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 46  WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 102

Query: 445 ML 450
           ML
Sbjct: 103 ML 104

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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 35/62 (56%), Positives = 39/62 (62%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 39  WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 95

Query: 445 ML 450
           ML
Sbjct: 96  ML 97

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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 35/62 (56%), Positives = 39/62 (62%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 29  WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 85

Query: 445 ML 450
           ML
Sbjct: 86  ML 87

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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 35/62 (56%), Positives = 39/62 (62%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 47  WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 103

Query: 445 ML 450
           ML
Sbjct: 104 ML 105

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>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 34/62 (54%), Positives = 38/62 (61%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        + P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 48  WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104

Query: 445 ML 450
           ML
Sbjct: 105 ML 106

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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 36/75 (48%), Positives = 46/75 (61%)
 Frame = +1

Query: 226 ATSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFA 405
           A  S+G++     +YGP+R  +L  G    +  P YL GE PGDYG+D  GL   PE F 
Sbjct: 28  APKSSGVE-----FYGPNRAKWL--GPYSENATPAYLTGEFPGDYGWDTAGLSADPETFK 80

Query: 406 KYQAFELIHARWAML 450
           +Y+  ELIHARWAML
Sbjct: 81  RYRELELIHARWAML 95

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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 35/62 (56%), Positives = 38/62 (61%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 49  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105

Query: 445 ML 450
           ML
Sbjct: 106 ML 107

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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 35/62 (56%), Positives = 38/62 (61%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 49  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105

Query: 445 ML 450
           ML
Sbjct: 106 ML 107

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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 35/62 (56%), Positives = 38/62 (61%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 50  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 106

Query: 445 ML 450
           ML
Sbjct: 107 ML 108

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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 35/62 (56%), Positives = 38/62 (61%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 48  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWA 104

Query: 445 ML 450
           ML
Sbjct: 105 ML 106

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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 35/62 (56%), Positives = 38/62 (61%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 51  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107

Query: 445 ML 450
           ML
Sbjct: 108 ML 109

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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 35/62 (56%), Positives = 38/62 (61%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 51  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107

Query: 445 ML 450
           ML
Sbjct: 108 ML 109

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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 35/62 (56%), Positives = 38/62 (61%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 51  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107

Query: 445 ML 450
           ML
Sbjct: 108 ML 109

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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 35/62 (56%), Positives = 38/62 (61%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 51  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107

Query: 445 ML 450
           ML
Sbjct: 108 ML 109

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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 35/62 (56%), Positives = 41/62 (66%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYG DR +YL  G    S  P YL+GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 49  WYGSDRPLYL--GPFSGSP-PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 105

Query: 445 ML 450
           ML
Sbjct: 106 ML 107

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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 34/62 (54%), Positives = 39/62 (62%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE F+K +  E+IH+RWA
Sbjct: 52  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWA 108

Query: 445 ML 450
           ML
Sbjct: 109 ML 110

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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 34/62 (54%), Positives = 39/62 (62%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE F+K +  E+IH+RWA
Sbjct: 53  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWA 109

Query: 445 ML 450
           ML
Sbjct: 110 ML 111

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>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 33/62 (53%), Positives = 39/62 (62%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        + P YL GE PGDYG+D  GL   PE FA+ +  E+IH+RWA
Sbjct: 47  WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 103

Query: 445 ML 450
           ML
Sbjct: 104 ML 105

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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 34/62 (54%), Positives = 37/62 (59%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE P DYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 51  WYGPDRVKYLGPF---SGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWA 107

Query: 445 ML 450
           ML
Sbjct: 108 ML 109

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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 68.9 bits (167), Expect = 5e-12
 Identities = 34/62 (54%), Positives = 38/62 (61%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGP+R  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 51  WYGPNRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107

Query: 445 ML 450
           ML
Sbjct: 108 ML 109

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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 68.6 bits (166), Expect = 7e-12
 Identities = 34/62 (54%), Positives = 37/62 (59%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D   L   PE FAK +  E+IH RWA
Sbjct: 51  WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWA 107

Query: 445 ML 450
           ML
Sbjct: 108 ML 109

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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 68.2 bits (165), Expect = 9e-12
 Identities = 37/74 (50%), Positives = 43/74 (58%)
 Frame = +1

Query: 229 TSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAK 408
           + SAG D     WYG DR  +L        E P YLNGE  GDYG+D  GL   PE FA+
Sbjct: 43  SKSAGSD---TIWYGADRPKFLGPF---SGETPSYLNGEFAGDYGWDTAGLSSDPETFAR 96

Query: 409 YQAFELIHARWAML 450
            +  E+IHARWAML
Sbjct: 97  NRELEVIHARWAML 110

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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 33/62 (53%), Positives = 36/62 (58%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P  FAK +  E+IH RW 
Sbjct: 50  WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWT 106

Query: 445 ML 450
           ML
Sbjct: 107 ML 108

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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 33/62 (53%), Positives = 38/62 (61%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYG DR  YL        E P YL GE PGDYG+D  GL   PE FA+ +  E+IH+RWA
Sbjct: 50  WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 106

Query: 445 ML 450
           ML
Sbjct: 107 ML 108

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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 33/62 (53%), Positives = 38/62 (61%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYG DR  YL        E P YL GE PGDYG+D  GL   PE FA+ +  E+IH+RWA
Sbjct: 50  WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 106

Query: 445 ML 450
           ML
Sbjct: 107 ML 108

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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 34/61 (55%), Positives = 39/61 (63%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYG DR +YL  G L  S  P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 48  WYGADRVLYL--GPLSGSP-PSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWA 104

Query: 445 M 447
           +
Sbjct: 105 I 105



 Score = 32.0 bits (71), Expect = 0.73
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +1

Query: 289 YLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAM 447
           ++  G L     P YL G       +DP GLG  PE FA+ +  E+ + R AM
Sbjct: 174 HVAGGRLGEVVDPLYLGGS------FDPLGLGDDPERFAELKVKEIKNGRLAM 220

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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 32/62 (51%), Positives = 37/62 (59%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYG DR  YL        + P YL GE PGDYG+D  GL   PE FA+ +  E+IH RWA
Sbjct: 49  WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105

Query: 445 ML 450
           ML
Sbjct: 106 ML 107

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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 32/62 (51%), Positives = 37/62 (59%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYG DR  YL        + P YL GE PGDYG+D  GL   PE FA+ +  E+IH RWA
Sbjct: 49  WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105

Query: 445 ML 450
           ML
Sbjct: 106 ML 107

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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 32/62 (51%), Positives = 37/62 (59%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYG DR  YL        + P YL GE PGDYG+D  GL   PE FA+ +  E+IH RWA
Sbjct: 49  WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105

Query: 445 ML 450
           ML
Sbjct: 106 ML 107

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>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 33/62 (53%), Positives = 37/62 (59%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYG DR  YL        E P YL GE PGDYG+D  GL   PE FA+ +  E+IH RWA
Sbjct: 49  WYGSDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105

Query: 445 ML 450
           ML
Sbjct: 106 ML 107

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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 33/62 (53%), Positives = 37/62 (59%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL  G       P YL GE PGDYG+D   +   PE FAK +  E+IH RWA
Sbjct: 50  WYGPDRPKYL--GPFSEG-TPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWA 106

Query: 445 ML 450
           ML
Sbjct: 107 ML 108

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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 33/62 (53%), Positives = 38/62 (61%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           W+GPD   YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 12  WHGPDGVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 68

Query: 445 ML 450
           ML
Sbjct: 69  ML 70

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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 32/62 (51%), Positives = 38/62 (61%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYG DR  +L        + P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 48  WYGADRPKFLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 104

Query: 445 ML 450
           ML
Sbjct: 105 ML 106

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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 32/62 (51%), Positives = 37/62 (59%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYG DR  YL        + P YL GE PGDYG+D  GL   PE FA+ +  E+IH RWA
Sbjct: 21  WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 77

Query: 445 ML 450
           ML
Sbjct: 78  ML 79

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>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 62.0 bits (149), Expect = 7e-10
 Identities = 28/59 (47%), Positives = 37/59 (62%)
 Frame = +1

Query: 274 PDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAML 450
           PDR ++ P      S  PE+L+G +PGD+G+DP GLG  PE        EL+H+RWAML
Sbjct: 63  PDRPLWFPG-----STPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAML 116

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>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 25/41 (60%), Positives = 30/41 (73%)
 Frame = +1

Query: 325 PEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAM 447
           PE+L+G +PGDYG+DP GLGK P     Y+  ELIH RWAM
Sbjct: 68  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAM 108

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>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 25/42 (59%), Positives = 31/42 (73%)
 Frame = +1

Query: 325 PEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAML 450
           PE+L+G +PGD+G+DP GLGK P     Y+  ELIH RWAML
Sbjct: 73  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAML 114

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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 26/44 (59%), Positives = 30/44 (68%)
 Frame = +1

Query: 319 EVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAML 450
           E P YL GE PGDYG+D  GL   PE FAK +  E+IH+ WAML
Sbjct: 5   EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAML 48

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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 27/59 (45%), Positives = 35/59 (59%)
 Frame = +1

Query: 274 PDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAML 450
           PDR ++ P      S  P +L+G +PGD+G+DP GL   PE     Q  EL+H RWAML
Sbjct: 63  PDRPLWFPG-----STPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAML 116

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>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 58.5 bits (140), Expect = 7e-09
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = +1

Query: 325 PEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAM 447
           PE+L+G +PGD+G+DP GLGK P     Y+  ELIH RWAM
Sbjct: 68  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAM 108

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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 58.2 bits (139), Expect = 9e-09
 Identities = 23/42 (54%), Positives = 30/42 (71%)
 Frame = +1

Query: 325 PEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAML 450
           P YL+G  PGD+G+D  GLG+ P +  +Y+  ELIH RWAML
Sbjct: 56  PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAML 97

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>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 25/43 (58%), Positives = 29/43 (67%)
 Frame = +1

Query: 319 EVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAM 447
           E P YL GE PGDYG+D  GL   PE FAK +  E+IH+R AM
Sbjct: 68  EWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAM 110

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>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 27/63 (42%), Positives = 36/63 (57%)
 Frame = +1

Query: 262 KWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARW 441
           ++YGPD      +G   + + P    GE PGDYG+D  GL   PE F +Y+  ELIHAR 
Sbjct: 56  QFYGPDAT----SGWDLQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARC 111

Query: 442 AML 450
            +L
Sbjct: 112 GLL 114

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>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 29/62 (46%), Positives = 32/62 (51%)
 Frame = +1

Query: 265 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 444
           WYGPDR  YL        E P YL GE          GL   PE FAK +  E+IH+RWA
Sbjct: 48  WYGPDRVKYLGPF---SGEAPSYLTGEF--------HGLSADPETFAKNRELEVIHSRWA 96

Query: 445 ML 450
           ML
Sbjct: 97  ML 98

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>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 30/90 (33%), Positives = 42/90 (46%)
 Frame = +1

Query: 181 RFNXXXXXXXXXXXVATSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDY 360
           R N             TSS  ++ +  +W        LP GL      P+YL G + GD 
Sbjct: 29  RLNRDLSFTSIGSSAKTSSFKVEAKKGEW--------LP-GLAS----PDYLTGSLAGDN 75

Query: 361 GYDPFGLGKKPEDFAKYQAFELIHARWAML 450
           G+DP GL + PE+   +   EL++ RWAML
Sbjct: 76  GFDPLGLAEDPENLKWFVQAELVNGRWAML 105

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>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 23/55 (41%), Positives = 31/55 (56%)
 Frame = +1

Query: 286 IYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAML 450
           ++ PN L      P +LNGE  GD G+DP GL   P+ F + +  E+ H R AML
Sbjct: 4   LWFPNTL-----APSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAML 53



 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 23/58 (39%), Positives = 31/58 (53%)
 Frame = +1

Query: 277 DRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAML 450
           +R ++ PN +      P YL GE  GD G+DP GL   P  F + Q  E+ H R +ML
Sbjct: 370 ERELWFPNIV-----PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSML 422



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 21/55 (38%), Positives = 30/55 (54%)
 Frame = +1

Query: 286 IYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAML 450
           ++ PN     +E P  L GE P D G+DP  L   P+ +A+ +  E+ H R AML
Sbjct: 189 LWFPN-----AEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAML 238

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>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 25/56 (44%), Positives = 34/56 (60%)
 Frame = +1

Query: 259 AKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFEL 426
           AK    DR ++ P      ++ PEYL+G + GDYG+DPFGLGK     A+Y  F+L
Sbjct: 45  AKTVISDRPLWFPG-----AKSPEYLDGSLVGDYGFDPFGLGKP----AEYLQFDL 91



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 349 PGDYGYDPFGLGKKPEDFAKYQAFELIHARWAML 450
           PG   +DP GL   P   A+ Q  E+ HAR AM+
Sbjct: 215 PGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMV 248

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>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 17/45 (37%), Positives = 27/45 (60%)
 Frame = +1

Query: 316 SEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAML 450
           ++ P +L GE P D G+DP  +   P  +A+ +  E+ HAR +ML
Sbjct: 166 AQPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSML 210

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>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 18/40 (45%), Positives = 26/40 (65%)
 Frame = +1

Query: 277 DRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPE 396
           DR ++ P  +      P++L+G + GDYG+DPFGLGK  E
Sbjct: 54  DRPLWYPGAIS-----PDWLDGSLVGDYGFDPFGLGKPAE 88



 Score = 33.5 bits (75), Expect = 0.25
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 349 PGDYGYDPFGLGKKPEDFAKYQAFELIHARWAML 450
           PG   +DP GL   PE  A+ Q  E+ HAR AM+
Sbjct: 218 PGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMV 251

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>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 19/45 (42%), Positives = 29/45 (64%)
 Frame = +1

Query: 277 DRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKY 411
           DR ++ P      +  PE+L+G + GD G+DPFGLG KP ++ +Y
Sbjct: 55  DRLVWFPG-----ANPPEWLDGSMIGDRGFDPFGLG-KPAEYLQY 93



 Score = 28.5 bits (62), Expect = 8.1
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 349 PGDYGYDPFGLGKKPEDFAKYQAFELIHARWAML 450
           PG Y +DP GL   PE     +  E+ H+R AM+
Sbjct: 219 PGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMV 251

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>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +1

Query: 286 IYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPE 396
           ++LPN     +  PE+L+G +PGD G+DP GL K  E
Sbjct: 51  LWLPN-----TTRPEWLDGSLPGDRGFDPLGLSKPSE 82

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>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 36.6 bits (83), Expect = 0.030
 Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 6/46 (13%)
 Frame = +1

Query: 331 YLNGEVPGDYGYDPFGLGKKPEDFA-----KYQAF-ELIHARWAML 450
           YL+G +PGD+G+DP GL   PE        K+ A+ E+I+ R+AML
Sbjct: 65  YLDGRLPGDFGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAML 109

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>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 36.2 bits (82), Expect = 0.039
 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 340 GEVPGDYGYDPFGLG-KKPEDFAKYQAFELIHARWAML 450
           G  PGD G+DP GL    P++F   Q  EL H R AM+
Sbjct: 146 GYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMI 183

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>PKHA6_HUMAN (Q9Y2H5) Pleckstrin homology domain-containing family A member 6|
           (Phosphoinositol 3-phosphate-binding protein 3) (PEPP-3)
          Length = 1048

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 10/76 (13%)
 Frame = +1

Query: 250 DELAKWYGPDRRIYLPNGLLDRSE-------VPEYL---NGEVPGDYGYDPFGLGKKPED 399
           ++L +W    R +  P  L   S        VPEY    + + P DY Y P G+  +PE 
Sbjct: 316 NQLQQWVNLRRGVPPPEDLRSPSRFYPVSRRVPEYYGPYSSQYPDDYQYYPPGV--RPES 373

Query: 400 FAKYQAFELIHARWAM 447
                A++ I   WA+
Sbjct: 374 ICSMPAYDRISPPWAL 389

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>NLPD_SALTY (P40827) Lipoprotein nlpD precursor|
          Length = 377

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 254 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 343
           N P+GT +T   T PT S T     STST+
Sbjct: 223 NKPAGTVVTAPVTAPTVSTTEPNASSTSTS 252

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>NLPD_SALDU (P39700) Lipoprotein nlpD precursor|
          Length = 377

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 254 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 343
           N P+GT +T   T PT S T     STST+
Sbjct: 223 NKPAGTVVTAPVTAPTVSTTEPNASSTSTS 252

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>ADH3_HAEIN (P44557) Putative alcohol dehydrogenase class 3 (EC 1.1.1.1)|
           (Alcohol dehydrogenase class III)
           (S-(hydroxymethyl)glutathione dehydrogenase) (EC
           1.1.1.284) (Glutathione-dependent formaldehyde
           dehydrogenase) (FDH) (FALDH)
          Length = 378

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 301 GLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIH 432
           G+  RSE+P+ +   + GD   +PF     P D    +AFEL+H
Sbjct: 325 GVKGRSELPQMVEDSMKGDIQLEPFVTHTMPLDKIN-EAFELMH 367

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>UBIE_PORGI (Q7MVR7) Menaquinone biosynthesis methyltransferase ubiE (EC|
           2.1.1.-)
          Length = 245

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = -2

Query: 366 VAVVSGNLAVEVLRHLRPVKEAVGQVDPPVRAVPLGE 256
           VA  +G+LA+E+ RH+  VK+  G VD  +  + +GE
Sbjct: 65  VATGTGDLAIEICRHIPSVKQVTG-VDLSLEMMRIGE 100

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>NLPD_SALTI (Q56131) Lipoprotein nlpD precursor|
          Length = 373

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 254 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 343
           N P+GT +T   T PT S T     STST+
Sbjct: 219 NKPAGTVVTAPVTAPTVSTTEPNASSTSTS 248

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>SSPO_BOVIN (P98167) SCO-spondin (Fragment)|
          Length = 867

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 349 PGDYGYDPFGLGKKPEDFAKYQAFELIHARWAML 450
           PGD  Y P GL + PE      + +L H  WA +
Sbjct: 340 PGDPCYSPLGLARLPEGSLPASSQQLEHPAWAAI 373

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>INLA_LISMF (Q723K6) Internalin A precursor|
          Length = 800

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 254 NSPSGTALTGGSTCPTASLTGRRCRSTSTARFPETTATI 370
           N+P  T   G +T P+A++ G    +TST     TT+T+
Sbjct: 716 NTPPTTNNGGNTTPPSANIPGSNTSNTSTGNSASTTSTM 754

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>PTW3C_BACSU (P39816) Putative PTS system glucosamine-specific EIICBA component|
           [Includes: Glucosamine permease IIC component (PTS
           system glucosamine-specific EIIC component);
           Glucosamine-specific phosphotransferase enzyme IIB
           component (EC 2.7.1.69) (PTS
          Length = 631

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 164 IFCAPAVGAAVAYLEEPAKSSRVPSILVGAS 72
           IFC PAV  A+ +   P K   +  +++ A+
Sbjct: 252 IFCLPAVALAIIHTARPEKKKMISGVMISAA 282

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>AGLU_TETPY (O00906) Lysosomal acid alpha-glucosidase precursor (EC 3.2.1.20)|
           (Acid maltase)
          Length = 923

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 9/53 (16%)
 Frame = +1

Query: 295 PNGL-LDRSEVPEYLNGEV--------PGDYGYDPFGLGKKPEDFAKYQAFEL 426
           P+G  +D +E   ++NGE+        PGD   +P  LG   EDF     FE+
Sbjct: 449 PSGFWIDMNEFSNFINGEISEDQNCIMPGDTTTNPNYLGNSVEDFYTRIPFEV 501

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>INLA_LISMO (P25146) Internalin A precursor|
          Length = 800

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 254 NSPSGTALTGGSTCPTASLTGRRCRSTSTARFPETTATI 370
           N+P  T   G +T P+A++ G    +TST     TT+T+
Sbjct: 716 NTPPTTNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTM 754


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,123,383
Number of Sequences: 219361
Number of extensions: 815306
Number of successful extensions: 2774
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 2646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2731
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result