ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd1o20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467929.1| Oryza sativa (japonica cultivar-group), mRNA 299 4e-78
2dbj|AK106684.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 4e-78
3ref|XM_463391.1| Oryza sativa (japonica cultivar-group), predic... 202 7e-49
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
5dbj|AP005002.3| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
7dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
8ref|NM_129991.1| Arabidopsis thaliana unknown protein AT2G44270 ... 58 3e-05
9gb|BT008353.1| Arabidopsis thaliana At2g44270 mRNA, complete cds 58 3e-05
10emb|BX820559.1|CNS0A9K0 Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
11dbj|AK117259.1| Arabidopsis thaliana At2g44270 mRNA for unknown ... 58 3e-05
12emb|BX819900.1|CNS0AA1D Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
13dbj|AP004944.1| Lotus japonicus genomic DNA, chromosome 1, clone... 50 0.007
14emb|CT027571.7| Mouse DNA sequence from clone RP24-354E11 on chr... 44 0.41
15gb|AC154181.2| Mus musculus BAC clone RP24-471B11 from chromosom... 44 0.41
16ref|NM_001015743.1| Xenopus tropicalis MGC107918 protein (MGC107... 44 0.41
17gb|BC089678.1| Xenopus tropicalis MGC107918 protein, mRNA (cDNA ... 44 0.41
18ref|NM_106266.1| Arabidopsis thaliana unknown protein AT1G76170 ... 42 1.6
19ref|XM_586724.2| PREDICTED: Bos taurus similar to G protein-coup... 42 1.6
20gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.6
21emb|AL161516.2|ATCHRIV28 Arabidopsis thaliana DNA chromosome 4, ... 42 1.6
22emb|AL049487.1|ATF28M11 Arabidopsis thaliana DNA chromosome 4, B... 42 1.6
23gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
24dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
25emb|AL669980.9| Mouse DNA sequence from clone RP23-218C2 on chro... 42 1.6
26ref|XM_482277.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
27ref|NM_201525.1| Homo sapiens G protein-coupled receptor 56 (GPR... 40 6.4
28ref|NM_201524.1| Homo sapiens G protein-coupled receptor 56 (GPR... 40 6.4
29ref|NM_005682.4| Homo sapiens G protein-coupled receptor 56 (GPR... 40 6.4
30gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 6.4
31gb|BC013207.1| Homo sapiens G protein-coupled receptor 56, mRNA ... 40 6.4
32gb|AY358400.1| Homo sapiens clone DNA50921 GPR56 (UNQ540) mRNA, ... 40 6.4
33gb|BT009896.1| Synthetic construct Homo sapiens G protein-couple... 40 6.4
34emb|AL353784.15| Human DNA sequence from clone RP11-314P6 on chr... 40 6.4
35ref|XM_777970.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.4
36gb|BC008770.2| Homo sapiens G protein-coupled receptor 56, trans... 40 6.4
37emb|AJ011001.1|HSA011001 Homo sapiens mRNA for TM7XN1 protein 40 6.4
38gb|BT007311.1| Homo sapiens G protein-coupled receptor 56 mRNA, ... 40 6.4
39emb|CR936747.1| Homo sapiens mRNA; cDNA DKFZp781L1398 (from clon... 40 6.4
40emb|CR858365.1| Pongo pygmaeus mRNA; cDNA DKFZp469J0715 (from cl... 40 6.4
41emb|CR857544.1| Pongo pygmaeus mRNA; cDNA DKFZp469M0928 (from cl... 40 6.4
42gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.4
43dbj|AK131550.1| Homo sapiens cDNA FLJ16789 fis, clone PROST20103... 40 6.4
44dbj|AK075555.1| Homo sapiens cDNA PSEC0255 fis, clone NT2RP30035... 40 6.4
45dbj|AK075270.1| Homo sapiens cDNA FLJ90789 fis, clone THYRO10015... 40 6.4
46dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
47dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
48gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.4
49dbj|AP006061.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
50gb|AY892234.1| Synthetic construct Homo sapiens clone FLH026459.... 40 6.4
51gb|AY889770.1| Synthetic construct Homo sapiens clone FLH026462.... 40 6.4
52emb|AL928793.13| Mouse DNA sequence from clone RP23-89M14 on chr... 40 6.4
53dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
54emb|AL391153.3|CNS06C7Z Human chromosome 14 DNA sequence BAC C-2... 40 6.4
55dbj|AK068527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
56gb|AF106858.1|AF106858 Homo sapiens G-protein-coupled receptor (... 40 6.4
57dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 6.4
58gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 40 6.4 
>ref|XM_467929.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1532

 Score =  299 bits (151), Expect = 4e-78
 Identities = 238/267 (89%)
 Strand = Plus / Plus

                                                                       
Query: 204 agggcagggagccgcctctgcaagcgctgcggcgagcggaaggccgcgctcaagcggccc 263
           ||||| ||||||||||||||||  ||||||||||||||||||||||| |||||||| |||
Sbjct: 239 agggcggggagccgcctctgcacacgctgcggcgagcggaaggccgccctcaagcgtccc 298

                                                                       
Query: 264 aaaaccctagaacagatatgtagggaatgcttctatattgtcttcgaggacgagattcat 323
           |||||| |||| |||||||||||||||||||||||| ||||||| ||||| ||||| |||
Sbjct: 299 aaaaccttagagcagatatgtagggaatgcttctatgttgtctttgaggatgagatccat 358

                                                                       
Query: 324 caaactattgttgacaataatttgtttaaagccggtgagcgtgtggcaattggagcttct 383
           || ||||||||||||||||||||||||||| | ||||| |||||||| ||||||||||||
Sbjct: 359 cagactattgttgacaataatttgtttaaacctggtgatcgtgtggccattggagcttct 418

                                                                       
Query: 384 ggtggaaaagattcaactgtgcttgcgtatgtgttatcagagttaaataaacgtcataaa 443
           ||||||||||||||||| ||||| || |||||| ||||||||||||||   ||||| |||
Sbjct: 419 ggtggaaaagattcaaccgtgctcgcatatgtgctatcagagttaaatcgtcgtcacaaa 478

                                      
Query: 444 tatggtctcgatttgttccttttatct 470
           ||| | || |||||||| || ||||||
Sbjct: 479 tattgccttgatttgtttctcttatct 505
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>dbj|AK106684.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-B10, full
           insert sequence
          Length = 1532

 Score =  299 bits (151), Expect = 4e-78
 Identities = 238/267 (89%)
 Strand = Plus / Plus

                                                                       
Query: 204 agggcagggagccgcctctgcaagcgctgcggcgagcggaaggccgcgctcaagcggccc 263
           ||||| ||||||||||||||||  ||||||||||||||||||||||| |||||||| |||
Sbjct: 239 agggcggggagccgcctctgcacacgctgcggcgagcggaaggccgccctcaagcgtccc 298

                                                                       
Query: 264 aaaaccctagaacagatatgtagggaatgcttctatattgtcttcgaggacgagattcat 323
           |||||| |||| |||||||||||||||||||||||| ||||||| ||||| ||||| |||
Sbjct: 299 aaaaccttagagcagatatgtagggaatgcttctatgttgtctttgaggatgagatccat 358

                                                                       
Query: 324 caaactattgttgacaataatttgtttaaagccggtgagcgtgtggcaattggagcttct 383
           || ||||||||||||||||||||||||||| | ||||| |||||||| ||||||||||||
Sbjct: 359 cagactattgttgacaataatttgtttaaacctggtgatcgtgtggccattggagcttct 418

                                                                       
Query: 384 ggtggaaaagattcaactgtgcttgcgtatgtgttatcagagttaaataaacgtcataaa 443
           ||||||||||||||||| ||||| || |||||| ||||||||||||||   ||||| |||
Sbjct: 419 ggtggaaaagattcaaccgtgctcgcatatgtgctatcagagttaaatcgtcgtcacaaa 478

                                      
Query: 444 tatggtctcgatttgttccttttatct 470
           ||| | || |||||||| || ||||||
Sbjct: 479 tattgccttgatttgtttctcttatct 505
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>ref|XM_463391.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1164

 Score =  202 bits (102), Expect = 7e-49
 Identities = 165/186 (88%)
 Strand = Plus / Plus

                                                                       
Query: 285 agggaatgcttctatattgtcttcgaggacgagattcatcaaactattgttgacaataat 344
           |||||||||||||| |||||||| ||||| ||||| ||||| ||||||||||| ||||||
Sbjct: 175 agggaatgcttctacattgtctttgaggatgagatccatcagactattgttgagaataat 234

                                                                       
Query: 345 ttgtttaaagccggtgagcgtgtggcaattggagcttctggtggaaaagattcaactgtg 404
           ||||||||| | ||||| |||||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 235 ttgtttaaacctggtgatcgtgtggccattggagcttctggtggtaaagattcaaccgtg 294

                                                                       
Query: 405 cttgcgtatgtgttatcagagttaaataaacgtcataaatatggtctcgatttgttcctt 464
           || || |||||| |||||||||||||| | ||||| |||||| |||| ||||||||||| 
Sbjct: 295 ctcgcatatgtgctatcagagttaaatcatcgtcacaaatattgtcttgatttgttcctc 354

                 
Query: 465 ttatct 470
           ||||||
Sbjct: 355 ttatct 360



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                       
Query: 204 agggcagggagccgcctctgcaagcgctgcggcgagcggaaggccgcgctcaagcggccc 263
           ||||| || |||||||||||||  |||||| ||||||||||||| || |||||||| |||
Sbjct: 40  agggcgggaagccgcctctgcacacgctgcagcgagcggaaggctgccctcaagcgtccc 99

                      
Query: 264 aaaaccctaga 274
           |||||||||||
Sbjct: 100 aaaaccctaga 110
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  161 bits (81), Expect = 3e-36
 Identities = 108/117 (92%)
 Strand = Plus / Minus

                                                                            
Query: 277      agatatgtagggaatgcttctatattgtcttcgaggacgagattcatcaaactattgttg 336
                ||||||||||||||||||||||| ||||||| ||||| ||||| ||||| ||||||||||
Sbjct: 32120164 agatatgtagggaatgcttctatgttgtctttgaggatgagatccatcagactattgttg 32120105

                                                                         
Query: 337      acaataatttgtttaaagccggtgagcgtgtggcaattggagcttctggtggaaaag 393
                ||||||||||||||||| | ||||| |||||||| ||||||||||||||||||||||
Sbjct: 32120104 acaataatttgtttaaacctggtgatcgtgtggccattggagcttctggtggaaaag 32120048



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                            
Query: 204      agggcagggagccgcctctgcaagcgctgcggcgagcggaaggccgcgctcaagcggccc 263
                ||||| ||||||||||||||||  ||||||||||||||||||||||| |||||||| |||
Sbjct: 32120434 agggcggggagccgcctctgcacacgctgcggcgagcggaaggccgccctcaagcgtccc 32120375

                           
Query: 264      aaaaccctaga 274
                |||||| ||||
Sbjct: 32120374 aaaaccttaga 32120364



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 66/79 (83%)
 Strand = Plus / Minus

                                                                            
Query: 392      agattcaactgtgcttgcgtatgtgttatcagagttaaataaacgtcataaatatggtct 451
                ||||||||| ||||| || |||||| ||||||||||||||   ||||| |||||| | ||
Sbjct: 32119876 agattcaaccgtgctcgcatatgtgctatcagagttaaatcgtcgtcacaaatattgcct 32119817

                                   
Query: 452      cgatttgttccttttatct 470
                 |||||||| || ||||||
Sbjct: 32119816 tgatttgtttctcttatct 32119798
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>dbj|AP005002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0486G03
          Length = 146713

 Score =  161 bits (81), Expect = 3e-36
 Identities = 108/117 (92%)
 Strand = Plus / Minus

                                                                         
Query: 277   agatatgtagggaatgcttctatattgtcttcgaggacgagattcatcaaactattgttg 336
             ||||||||||||||||||||||| ||||||| ||||| ||||| ||||| ||||||||||
Sbjct: 56820 agatatgtagggaatgcttctatgttgtctttgaggatgagatccatcagactattgttg 56761

                                                                      
Query: 337   acaataatttgtttaaagccggtgagcgtgtggcaattggagcttctggtggaaaag 393
             ||||||||||||||||| | ||||| |||||||| ||||||||||||||||||||||
Sbjct: 56760 acaataatttgtttaaacctggtgatcgtgtggccattggagcttctggtggaaaag 56704



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                         
Query: 204   agggcagggagccgcctctgcaagcgctgcggcgagcggaaggccgcgctcaagcggccc 263
             ||||| ||||||||||||||||  ||||||||||||||||||||||| |||||||| |||
Sbjct: 57090 agggcggggagccgcctctgcacacgctgcggcgagcggaaggccgccctcaagcgtccc 57031

                        
Query: 264   aaaaccctaga 274
             |||||| ||||
Sbjct: 57030 aaaaccttaga 57020



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 66/79 (83%)
 Strand = Plus / Minus

                                                                         
Query: 392   agattcaactgtgcttgcgtatgtgttatcagagttaaataaacgtcataaatatggtct 451
             ||||||||| ||||| || |||||| ||||||||||||||   ||||| |||||| | ||
Sbjct: 56532 agattcaaccgtgctcgcatatgtgctatcagagttaaatcgtcgtcacaaatattgcct 56473

                                
Query: 452   cgatttgttccttttatct 470
              |||||||| || ||||||
Sbjct: 56472 tgatttgtttctcttatct 56454
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  145 bits (73), Expect = 2e-31
 Identities = 106/117 (90%)
 Strand = Plus / Minus

                                                                            
Query: 277      agatatgtagggaatgcttctatattgtcttcgaggacgagattcatcaaactattgttg 336
                |||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||||
Sbjct: 23528535 agatatgtagggaatgcttctacattgtctttgaggatgagatccatcagactattgttg 23528476

                                                                         
Query: 337      acaataatttgtttaaagccggtgagcgtgtggcaattggagcttctggtggaaaag 393
                | ||||||||||||||| | ||||| |||||||| ||||||||||||||||| ||||
Sbjct: 23528475 agaataatttgtttaaacctggtgatcgtgtggccattggagcttctggtggtaaag 23528419



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                            
Query: 204      agggcagggagccgcctctgcaagcgctgcggcgagcggaaggccgcgctcaagcggccc 263
                ||||| || |||||||||||||  |||||| ||||||||||||| || |||||||| |||
Sbjct: 23528803 agggcgggaagccgcctctgcacacgctgcagcgagcggaaggctgccctcaagcgtccc 23528744

                           
Query: 264      aaaaccctaga 274
                |||||||||||
Sbjct: 23528743 aaaaccctaga 23528733



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                            
Query: 392      agattcaactgtgcttgcgtatgtgttatcagagttaaataaacgtcataaatatggtct 451
                ||||||||| ||||| || |||||| |||||||||||||| | ||||| |||||| ||||
Sbjct: 23528243 agattcaaccgtgctcgcatatgtgctatcagagttaaatcatcgtcacaaatattgtct 23528184

                                   
Query: 452      cgatttgttccttttatct 470
                 ||||||||||| ||||||
Sbjct: 23528183 tgatttgttcctcttatct 23528165
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>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0025A05
          Length = 154298

 Score =  145 bits (73), Expect = 2e-31
 Identities = 106/117 (90%)
 Strand = Plus / Minus

                                                                         
Query: 277   agatatgtagggaatgcttctatattgtcttcgaggacgagattcatcaaactattgttg 336
             |||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||||
Sbjct: 91840 agatatgtagggaatgcttctacattgtctttgaggatgagatccatcagactattgttg 91781

                                                                      
Query: 337   acaataatttgtttaaagccggtgagcgtgtggcaattggagcttctggtggaaaag 393
             | ||||||||||||||| | ||||| |||||||| ||||||||||||||||| ||||
Sbjct: 91780 agaataatttgtttaaacctggtgatcgtgtggccattggagcttctggtggtaaag 91724



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                         
Query: 204   agggcagggagccgcctctgcaagcgctgcggcgagcggaaggccgcgctcaagcggccc 263
             ||||| || |||||||||||||  |||||| ||||||||||||| || |||||||| |||
Sbjct: 92108 agggcgggaagccgcctctgcacacgctgcagcgagcggaaggctgccctcaagcgtccc 92049

                        
Query: 264   aaaaccctaga 274
             |||||||||||
Sbjct: 92048 aaaaccctaga 92038



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                         
Query: 392   agattcaactgtgcttgcgtatgtgttatcagagttaaataaacgtcataaatatggtct 451
             ||||||||| ||||| || |||||| |||||||||||||| | ||||| |||||| ||||
Sbjct: 91548 agattcaaccgtgctcgcatatgtgctatcagagttaaatcatcgtcacaaatattgtct 91489

                                
Query: 452   cgatttgttccttttatct 470
              ||||||||||| ||||||
Sbjct: 91488 tgatttgttcctcttatct 91470
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>ref|NM_129991.1| Arabidopsis thaliana unknown protein AT2G44270 mRNA, complete cds
          Length = 1077

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 128/161 (79%)
 Strand = Plus / Plus

                                                                       
Query: 264 aaaaccctagaacagatatgtagggaatgcttctatattgtcttcgaggacgagattcat 323
           ||||||||  |||||||||| || || ||||| |||   || || ||||| |||||||||
Sbjct: 82  aaaacccttcaacagatatgcagagagtgcttttatgaggtttttgaggaggagattcat 141

                                                                       
Query: 324 caaactattgttgacaataatttgtttaaagccggtgagcgtgtggcaattggagcttct 383
           |||   |||||| | |||  ||| || ||| | ||||| ||||| || || || || |||
Sbjct: 142 caagtcattgttcagaatcgtttattcaaatctggtgaacgtgttgctataggtgcctct 201

                                                    
Query: 384 ggtggaaaagattcaactgtgcttgcgtatgtgttatcaga 424
           |||||||||||||| ||||| || || ||||||||||||||
Sbjct: 202 ggtggaaaagattctactgttctggcatatgtgttatcaga 242
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>gb|BT008353.1| Arabidopsis thaliana At2g44270 mRNA, complete cds
          Length = 1068

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 128/161 (79%)
 Strand = Plus / Plus

                                                                       
Query: 264 aaaaccctagaacagatatgtagggaatgcttctatattgtcttcgaggacgagattcat 323
           ||||||||  |||||||||| || || ||||| |||   || || ||||| |||||||||
Sbjct: 82  aaaacccttcaacagatatgcagagagtgcttttatgaggtttttgaggaggagattcat 141

                                                                       
Query: 324 caaactattgttgacaataatttgtttaaagccggtgagcgtgtggcaattggagcttct 383
           |||   |||||| | |||  ||| || ||| | ||||| ||||| || || || || |||
Sbjct: 142 caagtcattgttcagaatcgtttattcaaatctggtgaacgtgttgctataggtgcctct 201

                                                    
Query: 384 ggtggaaaagattcaactgtgcttgcgtatgtgttatcaga 424
           |||||||||||||| ||||| || || ||||||||||||||
Sbjct: 202 ggtggaaaagattctactgttctggcatatgtgttatcaga 242
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>emb|BX820559.1|CNS0A9K0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH48ZC05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1533

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 128/161 (79%)
 Strand = Plus / Plus

                                                                       
Query: 264 aaaaccctagaacagatatgtagggaatgcttctatattgtcttcgaggacgagattcat 323
           ||||||||  |||||||||| || || ||||| |||   || || ||||| |||||||||
Sbjct: 115 aaaacccttcaacagatatgcagagagtgcttttatgaggtttttgaggaggagattcat 174

                                                                       
Query: 324 caaactattgttgacaataatttgtttaaagccggtgagcgtgtggcaattggagcttct 383
           |||   |||||| | |||  ||| || ||| | ||||| ||||| || || || || |||
Sbjct: 175 caagtcattgttcagaatcgtttattcaaatctggtgaacgtgttgctataggtgcctct 234

                                                    
Query: 384 ggtggaaaagattcaactgtgcttgcgtatgtgttatcaga 424
           |||||||||||||| ||||| || || ||||||||||||||
Sbjct: 235 ggtggaaaagattctactgttctggcatatgtgttatcaga 275
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>dbj|AK117259.1| Arabidopsis thaliana At2g44270 mRNA for unknown protein, complete
           cds, clone: RAFL16-81-I12
          Length = 1301

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 128/161 (79%)
 Strand = Plus / Plus

                                                                       
Query: 264 aaaaccctagaacagatatgtagggaatgcttctatattgtcttcgaggacgagattcat 323
           ||||||||  |||||||||| || || ||||| |||   || || ||||| |||||||||
Sbjct: 115 aaaacccttcaacagatatgcagagagtgcttttatgaggtttttgaggaggagattcat 174

                                                                       
Query: 324 caaactattgttgacaataatttgtttaaagccggtgagcgtgtggcaattggagcttct 383
           |||   |||||| | |||  ||| || ||| | ||||| ||||| || || || || |||
Sbjct: 175 caagtcattgttcagaatcgtttattcaaatctggtgaacgtgttgctataggtgcctct 234

                                                    
Query: 384 ggtggaaaagattcaactgtgcttgcgtatgtgttatcaga 424
           |||||||||||||| ||||| || || ||||||||||||||
Sbjct: 235 ggtggaaaagattctactgttctggcatatgtgttatcaga 275
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>emb|BX819900.1|CNS0AA1D Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS45ZH11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1268

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Plus

                                                                       
Query: 309 gaggacgagattcatcaaactattgttgacaataatttgtttaaagccggtgagcgtgtg 368
           ||||| ||||||||||||   |||||| | |||  ||| || ||| | ||||| ||||| 
Sbjct: 153 gaggaggagattcatcaagtcattgttcagaatcgtttattcaaatctggtgaacgtgtt 212

                                                                   
Query: 369 gcaattggagcttctggtggaaaagattcaactgtgcttgcgtatgtgttatcaga 424
           || || || || ||||||||||||||||| ||||| || || ||||||||||||||
Sbjct: 213 gctataggtgcctctggtggaaaagattctactgttctggcatatgtgttatcaga 268
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>dbj|AP004944.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT43B20, TM0117a,
           complete sequence
          Length = 33359

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                       
Query: 259 ggcccaaaaccctagaacagatatgtagggaatgcttctatattgtcttcgaggacgaga 318
           |||||||||| || ||||| || || |||||||||||||| |  ||||||||||| ||||
Sbjct: 350 ggcccaaaacactcgaacacatttgcagggaatgcttctacaccgtcttcgaggatgaga 291

            
Query: 319 t 319
           |
Sbjct: 290 t 290
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>emb|CT027571.7| Mouse DNA sequence from clone RP24-354E11 on chromosome 16, complete
             sequence
          Length = 200541

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 426   ttaaataaacgtcataaatatggtct 451
             ||||||||| ||||||||||||||||
Sbjct: 57834 ttaaataaaagtcataaatatggtct 57809
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>gb|AC154181.2| Mus musculus BAC clone RP24-471B11 from chromosome 16, complete sequence
          Length = 147226

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 426    ttaaataaacgtcataaatatggtct 451
              ||||||||| ||||||||||||||||
Sbjct: 103294 ttaaataaaagtcataaatatggtct 103319
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>ref|NM_001015743.1| Xenopus tropicalis MGC107918 protein (MGC107918), mRNA
          Length = 1787

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 372 attggagcttctggtggaaaagattcaactgtgcttgc 409
           |||||||| || |||||||| || ||||||||||||||
Sbjct: 238 attggagcctcaggtggaaaggactcaactgtgcttgc 275
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>gb|BC089678.1| Xenopus tropicalis MGC107918 protein, mRNA (cDNA clone MGC:107918
           IMAGE:7024310), complete cds
          Length = 1787

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 372 attggagcttctggtggaaaagattcaactgtgcttgc 409
           |||||||| || |||||||| || ||||||||||||||
Sbjct: 238 attggagcctcaggtggaaaggactcaactgtgcttgc 275
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>ref|NM_106266.1| Arabidopsis thaliana unknown protein AT1G76170 mRNA, complete cds
          Length = 900

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 384 ggtggaaaagattcaactgtgcttgcgtatgtgttatcaga 424
           ||||||||||||||  | ||||| || ||||||||||||||
Sbjct: 136 ggtggaaaagattcttcagtgctggcatatgtgttatcaga 176
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>ref|XM_586724.2| PREDICTED: Bos taurus similar to G protein-coupled receptor 56
           isoform b (LOC509703), mRNA
          Length = 3517

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 64  actctgctcctcctcctgccg 84
           |||||||||||||||||||||
Sbjct: 910 actctgctcctcctcctgccg 890
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 62       agactctgctcctcctcctgccgaa 86
                ||||||||||||||||||| |||||
Sbjct: 12379944 agactctgctcctcctccttccgaa 12379920
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>emb|AL161516.2|ATCHRIV28 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 28
          Length = 198005

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 454    atttgttccttttatctattg 474
              |||||||||||||||||||||
Sbjct: 140184 atttgttccttttatctattg 140204
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>emb|AL049487.1|ATF28M11 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M11 (ESSA project)
          Length = 85907

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 454   atttgttccttttatctattg 474
             |||||||||||||||||||||
Sbjct: 41823 atttgttccttttatctattg 41843
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>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0098H14, complete sequence
          Length = 132560

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 62    agactctgctcctcctcctgccgaa 86
             ||||||||||||||||||| |||||
Sbjct: 38962 agactctgctcctcctccttccgaa 38938
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 62       agactctgctcctcctcctgccgaa 86
                ||||||||||||||||||| |||||
Sbjct: 12376707 agactctgctcctcctccttccgaa 12376683
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>emb|AL669980.9| Mouse DNA sequence from clone RP23-218C2 on chromosome 4, complete
             sequence
          Length = 157624

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 72    cctcctcctgccgaagcacggctgc 96
             |||||||||||| ||||||||||||
Sbjct: 26894 cctcctcctgccaaagcacggctgc 26870
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>ref|XM_482277.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1371

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 68   tgctcctcctcctgccgaag 87
            ||||||||||||||||||||
Sbjct: 1073 tgctcctcctcctgccgaag 1054
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>ref|NM_201525.1| Homo sapiens G protein-coupled receptor 56 (GPR56), transcript
            variant 3, mRNA
          Length = 3755

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   ctctgctcctcctcctgccg 84
            ||||||||||||||||||||
Sbjct: 1007 ctctgctcctcctcctgccg 988
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>ref|NM_201524.1| Homo sapiens G protein-coupled receptor 56 (GPR56), transcript
            variant 2, mRNA
          Length = 3919

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   ctctgctcctcctcctgccg 84
            ||||||||||||||||||||
Sbjct: 1110 ctctgctcctcctcctgccg 1091
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>ref|NM_005682.4| Homo sapiens G protein-coupled receptor 56 (GPR56), transcript
            variant 1, mRNA
          Length = 3850

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   ctctgctcctcctcctgccg 84
            ||||||||||||||||||||
Sbjct: 1023 ctctgctcctcctcctgccg 1004
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 13      cccagcgccgtgacgccgcc 32
               ||||||||||||||||||||
Sbjct: 2905271 cccagcgccgtgacgccgcc 2905290
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>gb|BC013207.1| Homo sapiens G protein-coupled receptor 56, mRNA (cDNA clone
            IMAGE:4157209)
          Length = 3835

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   ctctgctcctcctcctgccg 84
            ||||||||||||||||||||
Sbjct: 1085 ctctgctcctcctcctgccg 1066
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>gb|AY358400.1| Homo sapiens clone DNA50921 GPR56 (UNQ540) mRNA, complete cds
          Length = 3819

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 65  ctctgctcctcctcctgccg 84
           ||||||||||||||||||||
Sbjct: 992 ctctgctcctcctcctgccg 973
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>gb|BT009896.1| Synthetic construct Homo sapiens G protein-coupled receptor 56
           mRNA, partial cds
          Length = 2082

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 65  ctctgctcctcctcctgccg 84
           ||||||||||||||||||||
Sbjct: 779 ctctgctcctcctcctgccg 760
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>emb|AL353784.15| Human DNA sequence from clone RP11-314P6 on chromosome 10 Contains part
              of the PCDH15 gene for protocadherin 15 and the 5' end of a
              novel gene, complete sequence
          Length = 169780

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 330    attgttgacaataatttgtttaaa 353
              ||||||||||||||| ||||||||
Sbjct: 132648 attgttgacaataatgtgtttaaa 132671
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>ref|XM_777970.1| PREDICTED: Strongylocentrotus purpuratus similar to 28S ribosomal
           protein S15, mitochondrial precursor (S15mt) (MRP-S15)
           (LOC577759), mRNA
          Length = 480

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 59  agcagactctgctcctcctc 78
           ||||||||||||||||||||
Sbjct: 449 agcagactctgctcctcctc 430
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>gb|BC008770.2| Homo sapiens G protein-coupled receptor 56, transcript variant 1,
           mRNA (cDNA clone MGC:1409 IMAGE:3139174), complete cds
          Length = 3702

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 65  ctctgctcctcctcctgccg 84
           ||||||||||||||||||||
Sbjct: 937 ctctgctcctcctcctgccg 918
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>emb|AJ011001.1|HSA011001 Homo sapiens mRNA for TM7XN1 protein
          Length = 3845

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   ctctgctcctcctcctgccg 84
            ||||||||||||||||||||
Sbjct: 1095 ctctgctcctcctcctgccg 1076
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>gb|BT007311.1| Homo sapiens G protein-coupled receptor 56 mRNA, complete cds
          Length = 2082

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 65  ctctgctcctcctcctgccg 84
           ||||||||||||||||||||
Sbjct: 779 ctctgctcctcctcctgccg 760
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>emb|CR936747.1| Homo sapiens mRNA; cDNA DKFZp781L1398 (from clone DKFZp781L1398)
          Length = 3670

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 65  ctctgctcctcctcctgccg 84
           ||||||||||||||||||||
Sbjct: 902 ctctgctcctcctcctgccg 883
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>emb|CR858365.1| Pongo pygmaeus mRNA; cDNA DKFZp469J0715 (from clone DKFZp469J0715)
          Length = 3665

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 65  ctctgctcctcctcctgccg 84
           ||||||||||||||||||||
Sbjct: 924 ctctgctcctcctcctgccg 905
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>emb|CR857544.1| Pongo pygmaeus mRNA; cDNA DKFZp469M0928 (from clone DKFZp469M0928)
          Length = 3693

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 65  ctctgctcctcctcctgccg 84
           ||||||||||||||||||||
Sbjct: 891 ctctgctcctcctcctgccg 872
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 11      cccccagcgccgtgacgccgccgaaacc 38
               |||||||| |||||| ||||||||||||
Sbjct: 2131712 cccccagcaccgtgaggccgccgaaacc 2131685
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>dbj|AK131550.1| Homo sapiens cDNA FLJ16789 fis, clone PROST2010326, highly  similar
           to Homo sapiens G protein-coupled receptor 56 (GPR56)
          Length = 3312

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 65  ctctgctcctcctcctgccg 84
           ||||||||||||||||||||
Sbjct: 566 ctctgctcctcctcctgccg 547
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>dbj|AK075555.1| Homo sapiens cDNA PSEC0255 fis, clone NT2RP3003536, highly similar to
            G protein-coupled receptor 56
          Length = 3774

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   ctctgctcctcctcctgccg 84
            ||||||||||||||||||||
Sbjct: 1046 ctctgctcctcctcctgccg 1027
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>dbj|AK075270.1| Homo sapiens cDNA FLJ90789 fis, clone THYRO1001523, highly similar to
            G protein-coupled receptor 56
          Length = 3748

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   ctctgctcctcctcctgccg 84
            ||||||||||||||||||||
Sbjct: 1023 ctctgctcctcctcctgccg 1004
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
              complete sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 229    gctgcggcgagcggaaggccgcgc 252
              ||||||||||||||||||| ||||
Sbjct: 369125 gctgcggcgagcggaaggcggcgc 369148
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 68       tgctcctcctcctgccgaag 87
                ||||||||||||||||||||
Sbjct: 19184621 tgctcctcctcctgccgaag 19184602
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 225     aagcgctgcggcgagcggaaggcc 248
               |||||| |||||||||||||||||
Sbjct: 3922933 aagcgccgcggcgagcggaaggcc 3922910
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>dbj|AP006061.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0414D03
          Length = 169823

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 229    gctgcggcgagcggaaggccgcgc 252
              ||||||||||||||||||| ||||
Sbjct: 117724 gctgcggcgagcggaaggcggcgc 117747
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>gb|AY892234.1| Synthetic construct Homo sapiens clone FLH026459.01L G
           protein-coupled receptor 56 (GPR56) mRNA, partial cds
          Length = 2082

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 65  ctctgctcctcctcctgccg 84
           ||||||||||||||||||||
Sbjct: 779 ctctgctcctcctcctgccg 760
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>gb|AY889770.1| Synthetic construct Homo sapiens clone FLH026462.01X G
           protein-coupled receptor 56 (GPR56) mRNA, complete cds
          Length = 2082

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 65  ctctgctcctcctcctgccg 84
           ||||||||||||||||||||
Sbjct: 779 ctctgctcctcctcctgccg 760
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>emb|AL928793.13| Mouse DNA sequence from clone RP23-89M14 on chromosome 2, complete
              sequence
          Length = 238545

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 415    tgttatcagagttaaataaa 434
              ||||||||||||||||||||
Sbjct: 182576 tgttatcagagttaaataaa 182557
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>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0086F04
          Length = 163579

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tgctcctcctcctgccgaag 87
              ||||||||||||||||||||
Sbjct: 106986 tgctcctcctcctgccgaag 106967
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>emb|AL391153.3|CNS06C7Z Human chromosome 14 DNA sequence BAC C-2576L4 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 172336

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 328    ctattgttgacaataatttg 347
              ||||||||||||||||||||
Sbjct: 113685 ctattgttgacaataatttg 113666
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>dbj|AK068527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155H09, full
           insert sequence
          Length = 2189

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 229 gctgcggcgagcggaaggccgcgc 252
           ||||||||||||||||||| ||||
Sbjct: 118 gctgcggcgagcggaaggcggcgc 141
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>gb|AF106858.1|AF106858 Homo sapiens G-protein-coupled receptor (GPR56) mRNA, complete cds
          Length = 2822

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 65  ctctgctcctcctcctgccg 84
           ||||||||||||||||||||
Sbjct: 941 ctctgctcctcctcctgccg 922
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 10      gcccccagcgccgtgacgccgccg 33
               |||||||||||||||||| |||||
Sbjct: 2681150 gcccccagcgccgtgacgacgccg 2681173
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     agcgccgtgacgccgccgaa 35
              ||||||||||||||||||||
Sbjct: 993518 agcgccgtgacgccgccgaa 993499


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,187,158
Number of Sequences: 3902068
Number of extensions: 4187158
Number of successful extensions: 88549
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87948
Number of HSP's gapped (non-prelim): 597
length of query: 475
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 453
effective length of database: 17,147,199,772
effective search space: 7767681496716
effective search space used: 7767681496716
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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