ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd1o14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome 357 2e-95
2gb|DQ490950.1| Festuca arundinacea 16S ribosomal RNA gene, parti... 357 2e-95
3gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N... 357 2e-95
4gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA... 357 2e-95
5gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1... 357 2e-95
6emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome 357 2e-95
7emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor... 357 2e-95
8emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,... 357 2e-95
9emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4,... 357 2e-95
10gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome... 357 2e-95
11gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,... 357 2e-95
12gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N... 357 2e-95
13gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, c... 357 2e-95
14dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 357 2e-95
15dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 357 2e-95
16dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 357 2e-95
17dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 357 2e-95
18gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 gen... 357 2e-95
19gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome 357 2e-95
20gb|AF176637.1|AF176637 Plastid transformation vector pMSK49 plas... 357 2e-95
21dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic D... 357 2e-95
22dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic D... 357 2e-95
23emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon 357 2e-95
24dbj|AK108725.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 2e-95
25dbj|AK105341.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 2e-95
26gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 357 2e-95
27emb|AJ555400.1|TTU555400 Triticum turgidum subsp. dicoccum parti... 357 2e-95
28emb|AJ555402.1|ATA555402 Aegilops tauschii partial chloroplast 1... 357 2e-95
29emb|AJ555401.1|ASP555401 Aegilops speltoides partial chloroplast... 357 2e-95
30dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ... 357 2e-95
31dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome 357 2e-95
32dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome 357 2e-95
33gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome... 349 6e-93
34gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome... 349 6e-93
35gb|DQ129641.1| Uncultured bacterium clone AKIW1139 16S ribosomal... 349 6e-93
36dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 349 6e-93
37dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 349 6e-93
38dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic D... 349 6e-93
39emb|AJ239003.1|TAE239003 Triticum aestivum (L.) partial chloropl... 349 6e-93
40dbj|AB240470.1| Uncultured bacterium gene for 16S rRNA, partial ... 341 1e-90
41gb|DQ417650.1| Festuca ovina 16S ribosomal RNA gene, partial seq... 337 2e-89
42emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,... 335 9e-89
43dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic D... 325 8e-86
44dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic D... 325 8e-86
45gb|DQ417649.1| Agrostis capillaris 16S ribosomal RNA gene, parti... 321 1e-84
46emb|AJ627251.1| Nymphaea alba chloroplast, complete genome 295 7e-77
47emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomi... 295 7e-77
48gb|DQ000201.1| Trewia nudiflora 16S ribosomal RNA gene, partial ... 295 7e-77
49gb|AF244560.1|AF244560 Nymphaea tuberosa 16S ribosomal RNA gene,... 295 7e-77
50gb|AF244557.1|AF244557 Magnolia x soulangeana 16S ribosomal RNA ... 295 7e-77
51emb|V00165.1|CHNTRN1 Tobacco chloroplast genes for 16S ribosomal... 295 7e-77
52gb|AY168732.2| Angiosperm environmental sample clone Hot Creek 1... 295 7e-77
53emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet... 289 5e-75
54gb|DQ013044.1| Lactuca sativa NADH dehydrogenase subunit 2 (ndhB... 287 2e-74
55gb|BT014415.1| Lycopersicon esculentum clone 133723R, mRNA sequence 287 2e-74
56gb|AY563527.1| Camellia sinensis 16S ribosomal RNA gene, partial... 287 2e-74
57gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, comp... 287 2e-74
58emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA 287 2e-74
59gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast... 287 2e-74
60emb|Y18934.1|CPY18934 Solanum nigrum chloroplast tRNA-Ala, tRNA-... 287 2e-74
61emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast ... 287 2e-74
62emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ... 287 2e-74
63emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloropl... 287 2e-74
64gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, c... 287 2e-74
65gb|DQ401208.1| Uncultured Pseudomonas sp. clone cloMSN28 16S rib... 287 2e-74
66dbj|AB075086.1| Uncultured bacterium gene for 16S rRNA, partial ... 287 2e-74
67dbj|AB075075.1| Uncultured bacterium gene for 16S rRNA, partial ... 287 2e-74
68gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence 287 2e-74
69dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequen... 287 2e-74
70gb|AY582139.1| Panax ginseng chloroplast, complete genome 287 2e-74
71emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome 287 2e-74
72gb|DQ211347.1| Plastid transformation vector pPRV110L, complete ... 287 2e-74
73gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloropla... 287 2e-74
74gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, ... 287 2e-74
75dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co... 287 2e-74
76dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s... 287 2e-74
77dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome 287 2e-74
78dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl... 287 2e-74
79emb|Y10178.1|CPAC16SR A.cepa chloroplast 16S rRNA gene 287 2e-74
80emb|X70938.1|CHNPTRNVI N.plumbaginifolia chloroplast 16SrDNA, tr... 287 2e-74
81gb|U12815.1|XXU12815 Transformation vector pPRV112B, plastid tar... 287 2e-74
82gb|U12814.1|XXU12814 Transformation vector pPRV112A, plastid tar... 287 2e-74
83gb|U12813.1|XXU12813 Transformation vector pPRV111B, plastid tar... 287 2e-74
84gb|U12812.1|XXU12812 Transformation vector pPRV111A, plastid tar... 287 2e-74
85gb|U12811.1|XXU12811 Transformation vector pPRV100B, plastid tar... 287 2e-74
86gb|U12810.1|XXU12810 Transformation vector pPRV100A, plastid tar... 287 2e-74
87gb|U12809.1|XXU12809 Transformation vector pPRV1, plastid target... 287 2e-74
88gb|L37580.1|RCNRGD Ricinis communis 16S ribosomal RNA (16S rRNA)... 287 2e-74
89gb|M82900.1|TOBCP16SRD Nicotiana plumbaginifolia 16S rRNA gene 287 2e-74
90gb|DQ187922.1| Uncultured phototrophic eukaryote clone 90 16S ri... 281 1e-72
91dbj|AB200661.1| uncultured bacterium gene for 16S rRNA, partial ... 281 1e-72
92dbj|AB075082.1| Uncultured bacterium gene for 16S rRNA, partial ... 281 1e-72
93gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ... 281 1e-72
94gb|L37578.1|ADQRGD Adriana glabrata 16S ribosomal RNA (16S rRNA)... 281 1e-72
95gb|AY818945.1| Plantago rugelii 16S ribosomal RNA (rrn16) gene, ... 280 4e-72
96gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloropl... 280 4e-72
97gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, comple... 280 4e-72
98emb|X72584.1|CHCRTRNAV C.reflexa chloroplast genes trnA, trnI, t... 280 4e-72
99gb|DQ129644.1| Uncultured bacterium clone AKIW961 16S ribosomal ... 280 4e-72
100emb|AJ639615.1| Vitis vinifera plastid partial 16S rRNA gene 280 4e-72
101gb|AF372579.1|AF372579 Lespedeza cuneata 16S ribosomal RNA gene,... 280 4e-72
102gb|AY216521.1| Lycopersicon esculentum tRNA-Val gene, complete s... 280 4e-72
103emb|X73670.1|CHDC16SRR D.carota chloroplast gene for tRNA-Val, 1... 280 4e-72
104gb|U76911.1|CPU76911 Carica papaya 16S ribosomal RNA, chloroplas... 280 4e-72
105dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome 280 4e-72
106gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, ... 280 4e-72
107gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome 280 4e-72
108dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone... 280 4e-72
109emb|AJ278626.1|CRE278626 Cuscuta reflexa chloroplast tRNA-Val(GA... 280 4e-72
110gb|U24585.1|IMU24585 Isoetes melanopoda chloroplast 16S rRNA gen... 280 4e-72
111gb|U03555.1|AIU03555 Alnus incana chloroplast 16S rRNA gene, com... 280 4e-72
112gb|AY803217.1| Angiosperm environmental sample clone C82 16S rib... 274 3e-70
113gb|AY803214.1| Angiosperm environmental sample clone B92 16S rib... 274 3e-70
114gb|AY803212.1| Angiosperm environmental sample clone B63 16S rib... 274 3e-70
115emb|AJ879453.1| Acorus calamus chloroplast, complete genome 274 3e-70
116emb|AJ428862.1|RHI428862 Unidentified cyanobacterium DBD2002 par... 274 3e-70
117gb|L37579.1|EUFRGD Euphorbia pulcherrima 16S ribosomal RNA (16S ... 274 3e-70
118emb|AJ440719.1|OIN440719 Putative agent of rhinosporidiosis part... 274 3e-70
119gb|AY895148.1| Chloroplast transformation vector pCLT327 Cry1Ab ... 272 1e-69
120gb|AY171318.1| Uncultured bacterium clone s47 16S ribosomal RNA ... 272 1e-69
121gb|AY171306.1| Uncultured bacterium clone s41 16S ribosomal RNA ... 272 1e-69
122gb|AF263516.1|AF263516 Vitis vinifera 16S ribosomal RNA gene, pa... 272 1e-69
123gb|AY942965.1| Uncultured phototrophic eukaryote clone 39 16S ri... 272 1e-69
124gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, compl... 272 1e-69
125gb|AY575999.1| Chloroplast transformation vector pCLT312, plasti... 272 1e-69
126gb|U24582.1|CGU24582 Cibotium glaucum chloroplast 16S rRNA gene,... 272 1e-69
127emb|AJ970307.1| Cucumis sativus chloroplast complete genome 268 2e-68
128gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid... 268 2e-68
129gb|DQ129643.1| Uncultured bacterium clone AKIW940 16S ribosomal ... 266 7e-68
130gb|DQ417651.1| Lotus corniculatus 16S ribosomal RNA gene, partia... 266 7e-68
131gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome 266 7e-68
132gb|AY803199.1| Angiosperm environmental sample clone A20 16S rib... 266 7e-68
133gb|AF244554.1|AF244554 Ginkgo biloba 16S ribosomal RNA gene, par... 266 7e-68
134emb|AJ867671.1| Uncultured bacterium partial 16S rRNA gene, clon... 266 7e-68
135emb|AJ867651.1| Uncultured phototrophic eukaryote partial 16S rR... 266 7e-68
136emb|AJ867650.1| Uncultured phototrophic eukaryote partial 16S rR... 266 7e-68
137emb|AJ867649.1| Uncultured phototrophic eukaryote partial 16S rR... 266 7e-68
138gb|U24594.1|OCU24594 Osmunda cinnamomea var. fokiensis chloropla... 266 7e-68
139gb|AF526941.1| Uncultured angiosperm clone T5-20 16S ribosomal R... 264 3e-67
140gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete se... 264 3e-67
141gb|DQ129642.1| Uncultured bacterium clone AKIW415 16S ribosomal ... 264 3e-67
142gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA ... 264 3e-67
143gb|AF372517.1|AF372517 Medicago sativa 16S ribosomal RNA gene, p... 264 3e-67
144gb|AY855838.1| Maytenus hookeri 16S ribosomal RNA gene, partial ... 264 3e-67
145gb|AF244558.1|AF244558 Megaceros aenigmaticus 16S ribosomal RNA ... 264 3e-67
146gb|AF244551.1|AF244551 Cycas revoluta 16S ribosomal RNA gene, pa... 264 3e-67
147gb|DQ323045.1| Phaseolus vulgaris clone BAC-71F18, complete sequ... 264 3e-67
148dbj|AB087477.1| Anthoceros formosae chloroplast 16S rRNA, comple... 264 3e-67
149emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21... 264 3e-67
150dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete ge... 264 3e-67
151gb|DQ201846.1| Stevia rebaudiana 16S ribosomal RNA gene, partial... 260 4e-66
152gb|DQ416274.1| Uncultured bacterium clone s3ub39 16S ribosomal R... 258 2e-65
153emb|AJ867655.1| Uncultured phototrophic eukaryote partial 16S rR... 258 2e-65
154emb|AJ867652.1| Uncultured phototrophic eukaryote partial 16S rR... 258 2e-65
155emb|AJ867648.1| Uncultured phototrophic eukaryote partial 16S rR... 258 2e-65
156gb|U24580.1|AEU24580 Angiopteris evecta chloroplast 16S rRNA gen... 258 2e-65
157gb|AY145653.1| Uncultured eukaryote FL12D05 16S ribosomal RNA ge... 258 2e-65
158dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complet... 258 2e-65
159emb|X07675.1|CHGMX Soybean plastid DNA for rps12, rps7, 16S rRNA... 256 6e-65
160gb|DQ417653.1| Trifolium repens 16S ribosomal RNA gene, partial ... 256 6e-65
161gb|AF244561.1|AF244561 Phaeoceros laevis 16S ribosomal RNA gene,... 256 6e-65
162gb|AC093544.8| Medicago truncatula chloroplast, complete genome,... 256 6e-65
163gb|AF393613.1| Sphagnum rubellum small subunit ribosomal RNA (rr... 256 6e-65
164emb|X06428.1|CHGMV16S Soybean chloroplast DNA for tRNA-Val and 1... 256 6e-65
165gb|U24592.1|SPU24592 Sphagnum palustre chloroplast 16S rRNA gene... 256 6e-65
166emb|AJ007728.1|OMI007728 Orobanche minor chloroplast trnV(GAC) g... 252 1e-63
167gb|U24589.1|OEU24589 Ophioglossum engelmannii chloroplast 16S rR... 252 1e-63
168emb|AJ867654.1| Uncultured phototrophic eukaryote partial 16S rR... 250 4e-63
169gb|AF143264.1| Vitis vinifera 16S ribosomal RNA gene, partial se... 248 2e-62
170dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast ... 248 2e-62
171emb|Z81323.1|PAA16SRRN P.aquilinum chloroplast 16S rRNA gene 248 2e-62
172gb|AY660566.1| Huperzia lucidula chloroplast, complete genome 242 1e-60
173gb|AF244563.1|AF244563 Polytrichum commune 16S ribosomal RNA gen... 242 1e-60
174gb|AF244556.1|AF244556 Huperzia lucidula 16S ribosomal RNA gene,... 242 1e-60
175gb|AF393607.1| Pellia neesiana small subunit ribosomal RNA (rrs)... 242 1e-60
176gb|AF393588.1| Climacium dendroides small subunit ribosomal RNA ... 242 1e-60
177gb|AF152609.1|AF152609 Pellia neesiana 16S ribosomal RNA gene, p... 242 1e-60
178gb|U24593.1|EAU24593 Equisetum arvense chloroplast 16S rRNA gene... 242 1e-60
179gb|DQ417652.1| Glechoma hederacea 16S ribosomal RNA gene, partia... 240 4e-60
180gb|AF058678.1|AF058678 Takakia lepidozioides small subunit ribos... 236 6e-59
181dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome 236 6e-59
182gb|U24590.1|PNU24590 Psilotum nudum chloroplast 16S rRNA gene, p... 236 6e-59
183gb|U24581.1|BBU24581 Botrychium biternatum chloroplast 16S rRNA ... 236 6e-59
184emb|AJ401354.1|CEU401354 Cuscuta europaea chloroplast 16S rRNA gene 236 6e-59
185gb|U24587.1|LDU24587 Lycopodium digitatum chloroplast 16S rRNA g... 234 2e-58
186emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA 232 9e-58
187gb|U47845.1|CRU47845 Cytinus ruber 16S ribosomal RNA gene, chlor... 232 9e-58
188emb|AJ278625.1|CSU278625 Cuscuta subinclusa chloroplast tRNA-Val... 232 9e-58
189emb|AJ278624.1|COD278624 Cuscuta odorata chloroplast tRNA-Val(GA... 232 9e-58
190emb|AJ278623.1|CGR278623 Cuscuta gronovii chloroplast tRNA-Val(G... 232 9e-58
191emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single r... 232 9e-58
192emb|X51598.1|PS16SVAL P.sativum 16S rRNA & tRNA-Val chloroplast ... 232 9e-58
193emb|AJ401353.1|CCA401353 Cuscuta campestris chloroplast 16S rRNA... 232 9e-58
194gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA 232 9e-58
195emb|X58864.1|CARRN16S C.americana plastid 16S rRNA gene and spac... 228 1e-56
196gb|AF244549.1|AF244549 Adiantum pedatum 16S ribosomal RNA gene, ... 228 1e-56
197gb|U24595.1|TOU24595 Tmesipteris oblanceolata chloroplast 16S rR... 226 6e-56
198gb|AF244550.1|AF244550 Calypogeia muelleriana 16S ribosomal RNA ... 224 2e-55
199gb|U24586.1|JVU24586 Juniperus virginiana chloroplast 16S rRNA g... 224 2e-55
200emb|AJ401355.1|CPL401355 Cuscuta platyloba chloroplast 16S rRNA ... 224 2e-55
201gb|AF141146.1|AF141146 Vigna unguiculata clone TV72NBS3 16S ribo... 220 4e-54
202gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete ge... 218 1e-53
203gb|AF393578.1| Bazzania trilobata small subunit ribosomal RNA (r... 218 1e-53
204dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic D... 218 1e-53
205gb|AF141142.1|AF141142 Vigna unguiculata clone VU124NBS2 16S rib... 218 1e-53
206emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon... 218 1e-53
207gb|AF445656.1| Uncultured eukaryote clone SM1B08 16S ribosomal R... 216 6e-53
208gb|U24583.1|DMU24583 Doodia maxima chloroplast 16S rRNA gene, pa... 216 6e-53
209gb|DQ494144.1| Uncultured cyanobacterium 16S ribosomal RNA gene,... 212 9e-52
210gb|AF141149.1|AF141149 Vigna unguiculata clone TV72NBS4 16S ribo... 212 9e-52
211gb|U24588.1|LJU24588 Lygodium japonicum chloroplast 16S rRNA gen... 210 3e-51
212gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete g... 208 1e-50
213gb|AY100594.1| Uncultured bacterium clone cvf116009 16S ribosoma... 202 8e-49
214gb|AY054380.1| Hordeum patagonicum clone HpaLTR-INS Sukkula retr... 202 8e-49
215gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome 198 1e-47
216gb|AY387369.1| Uncultured eukaryote clone OT124 16S ribosomal RN... 196 5e-47
217gb|AF393589.1| Cosmarium botrytis small subunit ribosomal RNA (r... 196 5e-47
218dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete g... 194 2e-46
219gb|AF393611.1| Spirogyra maxima small subunit ribosomal RNA (rrs... 192 8e-46
220gb|U24596.1|SMU24596 Spirogyra maxima chloroplast 16S rRNA gene,... 192 8e-46
221gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence 186 5e-44
222gb|U24584.1|ETU24584 Ephedra trifurca chloroplast 16S rRNA gene,... 186 5e-44
223gb|AY054378.1| Hordeum vulgare clone HmaLTR-INS Sukkula retrotra... 184 2e-43
224gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, comple... 184 2e-43
225gb|AF244555.1|AF244555 Gnetum leyboldii 16S ribosomal RNA gene, ... 184 2e-43
226gb|AY942956.1| Uncultured Pseudomonas sp. clone 29 16S ribosomal... 182 8e-43
227gb|U67743.1|CCU67743 Cynomorium coccineum chloroplast 16S riboso... 182 8e-43
228gb|U67740.1|BAU67740 Bdallophyton americanum chloroplast 16S rib... 182 8e-43
229gb|U24591.1|SAU24591 Selaginella apoda chloroplast 16S rRNA gene... 180 3e-42
230gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome 176 5e-41
231gb|AC152494.1| Zea mays BAC clone Z418K17, complete sequence 176 5e-41
232gb|AF497789.1| Zygnema sp. KA-2002 16S ribosomal RNA gene, parti... 176 5e-41
233gb|AF497787.1| Coleochaete irregularis 16S ribosomal RNA gene, p... 176 5e-41
234gb|AY425776.1| Uncultured phototrophic eukaryote clone 1790-8 16... 174 2e-40
235gb|AY054379.1| Hordeum murinum clone HmuLTR-INS Sukkula retrotra... 172 7e-40
236gb|AF355383.1| Microcoleus steenstrupii clone 152-2A 16S ribosom... 172 7e-40
237gb|AY702116.1| Nephroselmis pyriformis strain CCMP717 16S riboso... 170 3e-39
238gb|AF497790.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, ... 168 1e-38
239gb|AF497788.1| Chaetosphaeridium globosum 16S ribosomal RNA gene... 168 1e-38
240gb|AF393583.1| Chaetosphaeridium globosum SAG 26.98 small subuni... 168 1e-38
241gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete ... 168 1e-38
242gb|AY689654.1| Uncultured cyanobacterium clone BPM2_A05 16S ribo... 167 5e-38
243gb|AF218370.1| Arthronema gygaxiana UTCC 393 16S ribosomal RNA g... 165 2e-37
244gb|AY218828.1| Nostoc muscorum CENA61 16S ribosomal RNA gene, pa... 165 2e-37
245gb|AY239603.1| Leptolyngbya sp. CNP1-B1-4 16S ribosomal RNA gene... 165 2e-37
246gb|AY239600.1| Leptolyngbya sp. CNP1-B3-C9 16S ribosomal RNA gen... 165 2e-37
247gb|AF132778.1| Pseudanabaena sp. PCC 6903 small subunit ribosoma... 165 2e-37
248gb|AF132787.1| Pseudanabaena sp. PCC 7402 small subunit ribosoma... 165 2e-37
249gb|AF355398.1| Leptolyngbya schmidlei clone 145-A3 16S ribosomal... 165 2e-37
250gb|DQ378254.1| Uncultured soil bacterium clone M37_Pitesti 16S r... 165 2e-37
251gb|DQ062876.1| Uncultured cyanobacterium clone PENP 76 16S ribos... 165 2e-37
252gb|DQ062874.1| Uncultured bacterium clone PENP 68 16S ribosomal ... 165 2e-37
253emb|AJ630647.1| Oscillatoriales cyanobacterium UVFP3 partial 16S... 165 2e-37
254gb|AF355369.1| Microcoleus vaginatus isolate FB2-MC3 clone 187-1... 165 2e-37
255gb|AF355353.1| Microcoleus vaginatus isolate FB2-MC1 16S ribosom... 165 2e-37
256gb|AF355341.1| Microcoleus vaginatus isolate BSA-1a clone 149-4B... 165 2e-37
257gb|DQ185240.1| Nostoc sp. PCC 6720 16S ribosomal RNA gene, parti... 165 2e-37
258gb|DQ185207.1| Nostoc sp. 'Mollenhauer 1:1-067' 16S ribosomal RN... 165 2e-37
259dbj|AB074504.1| Calothrix brevissima gene for 16S ribosomal RNA,... 165 2e-37
260dbj|AB042971.1| Phormidium tenue (strain:A) gene for 16S rRNA, p... 165 2e-37
261dbj|AB039017.1| Pseudanabaena PCC6903 gene for 16S rRNA, partial... 165 2e-37
262gb|AC152495.1| Zea mays BAC clone Z486N13, complete sequence 163 7e-37
263gb|AF285258.1|AF285258 Synechococcus sp. OH34 16S ribosomal RNA ... 163 7e-37
264gb|AF285257.1|AF285257 Synechococcus sp. OH33 16S ribosomal RNA ... 163 7e-37
265gb|AF285256.1|AF285256 Synechococcus sp. OH30 16S ribosomal RNA ... 163 7e-37
266gb|AF285255.1|AF285255 Synechococcus sp. OH29 16S ribosomal RNA ... 163 7e-37
267gb|AF285254.1|AF285254 Synechococcus sp. OH28 16S ribosomal RNA ... 163 7e-37
268gb|AC149307.17| Medicago truncatula clone mth2-91a15, complete s... 161 3e-36
269gb|AF284803.1|AF284803 Microcoleus vaginatus PCC 9802 16S riboso... 161 3e-36
270dbj|AB045961.1| Oscillatoria princeps NIVA-CYA 150 gene for 16S ... 161 3e-36
271gb|AF355354.1| Microcoleus vaginatus isolate EM1-B1-C4 clone 194... 161 3e-36
272gb|AF355347.1| Microcoleus vaginatus isolate DSD5-1 clone 148-1C... 161 3e-36
273gb|AF355346.1| Microcoleus vaginatus isolate DSD5-1 clone 148-1B... 161 3e-36
274gb|AF355345.1| Microcoleus vaginatus isolate DCSD-1 clone 151-3B... 161 3e-36
275gb|AF355344.1| Microcoleus vaginatus isolate DCSD-1 clone 151-3A... 161 3e-36
276gb|AF355340.1| Microcoleus vaginatus isolate BSA-1a clone 149-4A... 161 3e-36
277gb|AF355339.1| Microcoleus vaginatus isolate TAA1-4 clone 149-1B... 161 3e-36
278gb|AF355338.1| Microcoleus vaginatus isolate TAA1-4 clone 149-1A... 161 3e-36
279dbj|AB074509.1| Oscillatoria sp. PCC 7112 gene for 16S ribosomal... 161 3e-36
280gb|DQ471447.1| Filamentous thermophilic cyanobacterium tBTRCCn 4... 159 1e-35
281gb|AF448078.1| Synechococcus sp. PCC 7336 16S ribosomal RNA gene... 159 1e-35
282gb|AY943037.1| Uncultured Klebsiella sp. clone 20 16S ribosomal ... 159 1e-35
283gb|AY942948.1| Uncultured Klebsiella sp. clone 20 16S ribosomal ... 159 1e-35
284dbj|AB074503.1| Nostoc linckia gene for 16S ribosomal RNA, parti... 159 1e-35
285dbj|AB067577.1| Gloeothece sp. KO11DG genes for 16S r RNA, Ile-t... 159 1e-35
286gb|AF218377.1| Microcoleus rushforthii UTCC 296 16S ribosomal RN... 157 4e-35
287gb|AF218373.1| Microcoleus antarcticus UTCC 474 16S ribosomal RN... 157 4e-35
288gb|AY100615.1| Uncultured bacterium clone cvf74060 16S ribosomal... 157 4e-35
289gb|AF076159.1| Uncultured Antarctic bacterium LB3-53 16S ribosom... 157 4e-35
290gb|AY151721.1| Uncultured Antarctic cyanobacterium clone BGC-Fr0... 157 4e-35
291gb|AY239591.1| Leptolyngbya sp. SEV5-5-C6 16S ribosomal RNA gene... 157 4e-35
292gb|DQ129645.1| Uncultured bacterium clone AKIW1142 16S ribosomal... 157 4e-35
293gb|DQ129320.1| Uncultured bacterium clone AKIW579 16S ribosomal ... 157 4e-35
294gb|DQ416504.1| Uncultured bacterium clone w3ub41 16S ribosomal R... 157 4e-35
295dbj|AB075993.1| Oscillatoria prolifera gene for 16S rRNA, partia... 157 4e-35
296gb|DQ393278.1| Spirulina laxissima strain SAG 256.80 16S ribosom... 157 4e-35
297gb|AF263333.1|AF263333 Oscillatoria sp. Ant-G16 16S ribosomal RN... 157 4e-35
298dbj|AB187507.1| Nostoc sp. YK-01 gene for 16S ribosomal RNA, par... 157 4e-35
299gb|AF247595.1|AF247595 Anabaenopsis circularis NIES21 16S riboso... 157 4e-35
300gb|AF355374.1| Microcoleus vaginatus isolate MOA4-1 clone 148-3B... 157 4e-35
301gb|AF355372.1| Microcoleus vaginatus isolate MOA4-MC1 clone 177-... 157 4e-35
302gb|AF355371.1| Microcoleus vaginatus isolate MOA4-1 clone 148-3A... 157 4e-35
303gb|AF355368.1| Microcoleus vaginatus isolate FB1-MC1 clone 177-6... 157 4e-35
304gb|AF355367.1| Microcoleus vaginatus isolate FB1-MC1 clone 177-6... 157 4e-35
305gb|AF355366.1| Microcoleus vaginatus isolate MER1-MC1 clone 178-... 157 4e-35
306gb|AF355365.1| Microcoleus vaginatus isolate MER1-MC1 clone 178-... 157 4e-35
307gb|AF355364.1| Microcoleus vaginatus isolate WD1-MC2 clone 194-4... 157 4e-35
308gb|AF355361.1| Microcoleus vaginatus isolate EM3-J1 clone 178-6A... 157 4e-35
309gb|AF355359.1| Microcoleus vaginatus isolate MOA4-MC3 clone 177-... 157 4e-35
310gb|AF355358.1| Microcoleus vaginatus isolate MOA4-MC3 clone 177-... 157 4e-35
311gb|AF355357.1| Microcoleus vaginatus isolate EM3-J1 clone 178-6B... 157 4e-35
312gb|AF355355.1| Microcoleus vaginatus isolate CSV2-MC1 clone 178-... 157 4e-35
313gb|AF355349.1| Microcoleus vaginatus isolate OTA2-1 clone 152-1B... 157 4e-35
314dbj|AB116658.2| Aphanothece sacrum genes for 16S ribosomal RNA, ... 157 4e-35
315dbj|AB119259.1| Aphanothece sacrum gene for 16S rRNA, partial se... 157 4e-35
316dbj|AB085687.1| Nostoc sp. HK-01 gene for 16S ribosomal RNA, par... 157 4e-35
317dbj|AB045897.1| Tychonema bourrellyi gene for 16S ribosomal RNA,... 157 4e-35
318gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome 157 4e-35
319dbj|AB043537.1| Anabaenopsis circularis gene for 16S rRNA, parti... 157 4e-35
320gb|DQ166506.1| Uncultured bacterium clone ML-9-95 16S ribosomal ... 155 2e-34
321gb|AY193067.1| Uncultured cyanobacterium clone O1aA96 16S riboso... 155 2e-34
322gb|AY193066.1| Uncultured cyanobacterium clone O1aA95 16S riboso... 155 2e-34
323gb|AY193065.1| Uncultured cyanobacterium clone O1aA9 16S ribosom... 155 2e-34
324gb|AY193064.1| Uncultured cyanobacterium clone O1aA6 16S ribosom... 155 2e-34
325gb|AY193063.1| Uncultured cyanobacterium clone O1aA4 16S ribosom... 155 2e-34
326gb|AY193058.1| Uncultured cyanobacterium clone O1aA1 16S ribosom... 155 2e-34
327gb|AY193054.1| Uncultured cyanobacterium clone O1aA80 16S riboso... 155 2e-34
328gb|AY151734.1| Uncultured Antarctic cyanobacterium clone Fr304 1... 155 2e-34
329gb|AF132779.1| Calothrix desertica PCC 7102 small subunit riboso... 155 2e-34
330gb|AF505962.1| Uncultured cyanobacterium NACy05-A 16S ribosomal ... 155 2e-34
331gb|AF505961.1| Uncultured cyanobacterium NACy05-A 16S ribosomal ... 155 2e-34
332gb|AF505960.1| Synechococcus sp. 37 NACy05-A 16S ribosomal RNA g... 155 2e-34
333gb|AY293511.1| Uncultured cyanobacterium clone FL12G09 16S ribos... 155 2e-34
334dbj|AB075980.1| Calothrix desertica PCC 7102 gene for 16S rRNA, ... 155 2e-34
335gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 155 2e-34
336gb|AF285259.1|AF285259 Synechococcus sp. OH2 16S ribosomal RNA g... 155 2e-34
337gb|AF141145.1|AF141145 Vigna unguiculata clone TV72NBS2 16S ribo... 155 2e-34
338gb|U46209.1|AGU46209 Alnus glutinosa 16S rRNA gene, chloroplast ... 155 2e-34
339gb|AY884052.1| Synechococcus sp. JA-3-3Ab genotype A-NACy05a 16S... 155 2e-34
340emb|X95278.1|AGCH16SRR A.glutinosa chloroplast 16S ribosomal RNA 155 2e-34
341gb|AY143732.1| Uncultured cyanobacterium clone V18 16S ribosomal... 155 2e-34
342emb|AJ582391.1|RGI582391 Rhopalodia gibba partial 16S rRNA gene 153 7e-34
343gb|AF355370.1| Microcoleus vaginatus isolate USPCI-1 clone 151-6... 153 7e-34
344gb|AF355352.1| Microcoleus vaginatus isolate FI5-MC4 clone 182-1... 153 7e-34
345gb|AF355351.1| Microcoleus vaginatus isolate EM1-B1-C4 clone 194... 153 7e-34
346gb|AF355350.1| Microcoleus vaginatus isolate FI5-MC4 clone 182-1... 153 7e-34
347gb|AF355348.1| Microcoleus vaginatus isolate DSD5-1 clone 148-1D... 153 7e-34
348emb|X81840.1|CPRRNA16S C.paradoxa gene for 16S small subunit rib... 153 7e-34
349gb|AF506240.1| Nostoc sp. 'Peltigera venosa cyanobiont 15' 16S r... 151 3e-33
350gb|AY742452.1| Nostoc sp. PCC 9231 16S small subunit ribosomal R... 151 3e-33
351gb|DQ234825.1| Anabaena flos-aquae strain UTEX LB2557 16S riboso... 151 3e-33
352gb|DQ234824.1| Anabaena flos-aquae strain UTEX LB2391 16S riboso... 151 3e-33
353gb|DQ234823.1| Anabaena flos-aquae strain UTEX LB2338 16S riboso... 151 3e-33
354gb|AF218376.1| Phormidium sp. UTCC 487 16S ribosomal RNA gene, p... 151 3e-33
355gb|AF218369.1| Microcoleus acremanii UTCC 313 16S ribosomal RNA ... 151 3e-33
356gb|DQ015808.1| Uncultured bacterium clone ELB16-090 16S ribosoma... 151 3e-33
357gb|DQ330786.1| Uncultured cyanobacterium clone 01D1YY72 16S ribo... 151 3e-33
358gb|DQ330767.1| Uncultured cyanobacterium clone 01D1Y53 16S ribos... 151 3e-33
359gb|AY328898.1| Nostoc sp. 117.8.2 16S ribosomal RNA gene, partia... 151 3e-33
360gb|AY151731.1| Uncultured Antarctic cyanobacterium clone Fr147 1... 151 3e-33
361gb|AY151724.1| Uncultured Antarctic cyanobacterium clone Fr005 1... 151 3e-33
362dbj|AB234298.1| Nephroselmis pyriformis chloroplast gene for 16S... 151 3e-33
363gb|AY190174.1| Uncultured Synechococcus sp. clone Cym3 16S ribos... 151 3e-33
364gb|AF263339.1|AF263339 Phormidium sp. E18 16S ribosomal RNA gene... 151 3e-33
365gb|AF263338.1|AF263338 Oscillatoria sp. E17 16S ribosomal RNA ge... 151 3e-33
366emb|AJ580008.1|LSP580008 Limnothrix sp. MR1 16S rRNA gene (parti... 151 3e-33
367emb|AJ580007.1|LRE580007 Limnothrix redekei CCAP 1443/1 16S rRNA... 151 3e-33
368emb|AJ344552.1|CBB344552 Chroococcidiopsis sp. BB79.2 partial 16... 151 3e-33
369emb|AJ781044.1| Merismopedia glauca 0BB39S01 16S rRNA gene, stra... 151 3e-33
370dbj|AB042972.1| Phormidium tenue (strain:C) gene for 16S rRNA, p... 151 3e-33
371dbj|AB042970.1| Phormidium tenue (strain:S) gene for 16S rRNA, p... 151 3e-33
372dbj|AB042842.1| Phormidium tenue gene for 16S rRNA, partial sequ... 151 3e-33
373dbj|AB042838.1| Phormidium tenue gene for 16S rRNA, partial sequ... 151 3e-33
374dbj|AB047105.1| Phormidium tenue gene for 16S rRNA, partial sequ... 151 3e-33
375dbj|AB039020.1| Pseudanabaena PCC7408 gene for 16S rRNA, partial... 151 3e-33
376dbj|AB067581.1| Cyanothece sp. SKTU126 genes for 16S rRNA, Ile-t... 151 3e-33
377dbj|AB067576.1| Gloeothece sp. SK40 genes for 16S rRNA, Ile-tRNA... 151 3e-33
378gb|AF518770.1| Trichodesmium havanum str. F34-5 16S ribosomal RN... 149 1e-32
379gb|AF506265.1| Nostoc sp. 'Nephroma resupinatum cyanobiont 40' 1... 149 1e-32
380gb|AF506264.1| Nostoc sp. 'Nephroma laevigatum cyanobiont 39' 16... 149 1e-32
381gb|AF506263.1| Nostoc sp. 'Nephroma resupinatum cyanobiont 38' 1... 149 1e-32
382gb|AF506262.1| Nostoc sp. 'Nephroma helveticum cyanobiont 37' 16... 149 1e-32
383gb|AF506261.1| Nostoc sp. 'Lobaria pulmonaria cyanobiont 36' 16S... 149 1e-32
384gb|AF506259.1| Nostoc sp. 'Lobaria cyanobiont 34' 16S ribosomal ... 149 1e-32
385gb|AF506258.1| Nostoc sp. 'Nephroma helveticum cyanobiont 33' 16... 149 1e-32
386gb|AF506257.1| Nostoc sp. 'Nephroma parile cyanobiont 32' 16S ri... 149 1e-32
387gb|AF506255.1| Nostoc sp. 'Parmeliella triptophylla cyanobiont 3... 149 1e-32
388gb|AF506254.1| Nostoc sp. 'Parmeliella triptophylla cyanobiont 2... 149 1e-32
389gb|AF506252.1| Nostoc sp. 'Nephroma parile cyanobiont 27' 16S ri... 149 1e-32
390gb|AF506251.1| Nostoc sp. 'Nephroma parile cyanobiont 26' 16S ri... 149 1e-32
391gb|AF506247.1| Nostoc sp. 'Peltigera praetextata cyanobiont 22' ... 149 1e-32
392gb|AF506246.1| Nostoc sp. 'Muscicolous cyanobiont 21' 16S riboso... 149 1e-32
393gb|AF506245.1| Nostoc sp. 'Peltigera collina cyanobiont 20' 16S ... 149 1e-32
394gb|AF506244.1| Nostoc sp. 'Lobaria hallii cyanobiont 19' 16S rib... 149 1e-32
395gb|AF506243.1| Nostoc sp. 'Peltigera pruinosa cyanobiont 18' 16S... 149 1e-32
396gb|AF506242.1| Nostoc sp. 17 16S ribosomal RNA gene, partial seq... 149 1e-32
397gb|AF506239.1| Nostoc sp. 'Peltigera pruinosa cyanobiont 14' 16S... 149 1e-32
398gb|AF506238.1| Nostoc sp. 'Muscicolous cyanobiont 10' 16S riboso... 149 1e-32
399gb|AY577540.1| Nostoc sp. FI5-VF4 16S ribosomal RNA gene, partia... 149 1e-32
400gb|AY577539.1| Nostoc sp. FI5-VF12 16S ribosomal RNA gene, parti... 149 1e-32
401gb|AY577538.1| Nostoc indistinguenda CM1-VF10 16S ribosomal RNA ... 149 1e-32
402gb|AY577537.1| Nostoc desertorum CM1-VF14 16S ribosomal RNA gene... 149 1e-32
403gb|AY577536.1| Nostoc commune EV1-KK1 16S ribosomal RNA gene, pa... 149 1e-32
404gb|AY577535.1| Nostoc lichenoides CNP-AK1 16S ribosomal RNA gene... 149 1e-32
405gb|AY577532.1| Nostoc sp. JT1-VF3 16S ribosomal RNA gene, partia... 149 1e-32
406gb|AY742454.1| Nostoc sp. 8938 16S small subunit ribosomal RNA g... 149 1e-32
407gb|AY742453.1| Nostoc sp. PCC 9305 16S small subunit ribosomal R... 149 1e-32
408gb|AY742451.1| Nostoc sp. PCC 9229 16S small subunit ribosomal R... 149 1e-32
409gb|AY742450.1| Nostoc sp. 'Azolla cyanobiont' 16S small subunit ... 149 1e-32
410gb|AY742449.1| Nostoc sp. 8963 16S small subunit ribosomal RNA g... 149 1e-32
411gb|AY672727.1| Microcystis sp. AICB 34 16S ribosomal RNA gene an... 149 1e-32
412gb|AY948018.1| Uncultured phototrophic eukaryote clone PRD18C10 ... 149 1e-32
413gb|AY620239.1| Cyanothece sp. WH 8904 16S ribosomal RNA gene, pa... 149 1e-32
414gb|AY422697.1| Uncultured bacterium clone BSC-16-2 16S ribosomal... 149 1e-32
415gb|AY422694.1| Nostoc sp. 'Bad Sachsa' 16S ribosomal RNA gene, p... 149 1e-32
416gb|AF473936.1| Uncultured cyanobacterium 128-56 16S ribosomal RN... 149 1e-32
417gb|AF218371.1| Pseudanabaena tremula UTCC 471 16S ribosomal RNA ... 149 1e-32
418gb|AY785313.1| Stigonematales cyanobacterium AEL04-Oct-6-03 16S ... 149 1e-32
419gb|AY430150.1| Symploca sp. HPC-3 16S ribosomal RNA gene, partia... 149 1e-32
420gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete g... 149 1e-32
421gb|AY566855.1| Nostoc sp. IO-102-I 16S ribosomal RNA gene, parti... 149 1e-32
422gb|DQ513321.1| Calothrix sp. NTCR05 16S ribosomal RNA gene, part... 149 1e-32
423gb|AY328900.1| Nostoc sp. 119.7.2 16S ribosomal RNA gene, partia... 149 1e-32
424gb|AY328899.1| Nostoc sp. 119.7.1 16S ribosomal RNA gene, partia... 149 1e-32
425gb|AY328897.1| Nostoc sp. 113.5 16S ribosomal RNA gene, partial ... 149 1e-32
426gb|AY112695.1| Nostoc sp. VI.5 16S ribosomal RNA gene, partial s... 149 1e-32
427gb|AF170775.1| Uncultured cyanobacterium QSSC8L-15 16S ribosomal... 149 1e-32
428gb|AF170762.1| Uncultured cyanobacterium QSSC8L-2 16S ribosomal ... 149 1e-32
429gb|AF350246.1| Uncultured Synechococcus sp. 16S ribosomal RNA ge... 149 1e-32
430gb|AF345900.1| Uncultured Synechococcus sp. 16S ribosomal RNA ge... 149 1e-32
431gb|AF446263.1| Uncultured cyanobacterium FL08E07 16S ribosomal R... 149 1e-32
432gb|AF490373.1| Uncultured cyanobacterium clone AKB14 16S ribosom... 149 1e-32
433gb|AY038547.1| Uncultured cyanobacterium clone CD4A5 16S ribosom... 149 1e-32
434gb|AY038435.1| Uncultured cyanobacterium clone CD5F5 16S ribosom... 149 1e-32
435gb|AY100606.1| Uncultured bacterium clone cvf61044 16S ribosomal... 149 1e-32
436gb|AF454341.2| Uncultured plastid clone ML513M-21 16S ribosomal ... 149 1e-32
437gb|AF454335.2| Uncultured plastid clone ML512M-1 16S ribosomal R... 149 1e-32
438gb|AF454334.1| Uncultured plastid clone ML320J-7 16S ribosomal R... 149 1e-32
439gb|AF454332.1| Uncultured plastid clone ML320J-27 16S ribosomal ... 149 1e-32
440gb|AF454331.1| Uncultured plastid clone ML320J-26 16S ribosomal ... 149 1e-32
441gb|AF454327.1| Uncultured plastid clone ML310M-37 16S ribosomal ... 149 1e-32
442gb|AF454323.2| Uncultured plastid clone ML310M-1a 16S ribosomal ... 149 1e-32
443gb|AF454320.1| Uncultured plastid clone ML1218M-4 16S ribosomal ... 149 1e-32
444gb|AF454318.2| Uncultured plastid clone ML1218M-26 16S ribosomal... 149 1e-32
445gb|AY439283.1| Nodularia sp. F81 16S ribosomal RNA gene, partial... 149 1e-32
446gb|AY218832.1| Nostoc piscinale CENA21 16S ribosomal RNA gene, p... 149 1e-32
447gb|AY218831.1| Cylindrospermum sp. CENA33 16S ribosomal RNA gene... 149 1e-32
448gb|AY354194.1| Aphanizomenon gracile strain LMECYA40 16S ribosom... 149 1e-32
449gb|AY151759.1| Uncultured Antarctic cyanobacterium clone Fr285 1... 149 1e-32
450gb|AY151733.1| Uncultured Antarctic cyanobacterium clone Fr297 1... 149 1e-32
451gb|AY151726.1| Uncultured Antarctic cyanobacterium clone Fr048 1... 149 1e-32
452gb|AY196086.1| Aphanizomenon gracile str. 'Aph NH-5' 16S ribosom... 149 1e-32
453gb|AF132933.1| Oscillatoria sancta PCC 7515 16S ribosomal RNA ge... 149 1e-32
454gb|AF132789.1| Cylindrospermum stagnale PCC 7417 small subunit r... 149 1e-32
455gb|AF132772.1| Synechococcus lividus C1 small subunit ribosomal ... 149 1e-32
456gb|AF425995.1| Aphanizomenon sp. NH-5 16S ribosomal RNA gene, pa... 149 1e-32
457gb|DQ131175.1| Uncultured Synechococcus sp. from China 16S ribos... 149 1e-32
458gb|DQ131174.1| Uncultured Synechococcus sp. from Philippines 16S... 149 1e-32
459gb|DQ129355.1| Uncultured bacterium clone AKIW1097 16S ribosomal... 149 1e-32
460gb|AY702194.1| Uncultured phototrophic eukaryote clone AS2_50C11... 149 1e-32
461gb|AY452534.1| Capsosira lowei HWF3-JJ1 16S ribosomal RNA gene, ... 149 1e-32
462gb|AY452533.1| Rexia erecta CAT 1M 16S ribosomal RNA gene, parti... 149 1e-32
463emb|AJ133163.1|CSP133163 Cylindrospermum sp. PCC 7417 partial 16... 149 1e-32
464emb|AJ781151.1| Nodularia sphaerocarpa 16S rRNA gene, strain UTE... 149 1e-32
465emb|AJ781150.1| Cyanobacterium BECID34 16S rRNA gene, strain BEC... 149 1e-32
466emb|AJ781149.1| Nodularia sphaerocarpa 16S rRNA gene, strain BEC... 149 1e-32
467emb|AJ781148.1| Nodularia sphaerocarpa 16S rRNA gene, strain UTE... 149 1e-32
468emb|AJ781147.1| Nodularia sphaerocarpa 16S rRNA gene, strain BEC... 149 1e-32
469emb|AJ781146.1| Nodularia harveyana 16S rRNA gene, strain BECID29 149 1e-32
470emb|AJ781144.1| Nodularia sphaerocarpa 16S rRNA gene, strain Fae19 149 1e-32
471emb|AJ781141.1| Nodularia sphaerocarpa 16S rRNA gene, strain Hue... 149 1e-32
472emb|AJ781140.1| Nodularia sphaerocarpa 16S rRNA gene, strain Up16a 149 1e-32
473emb|AJ781139.1| Nodularia sphaerocarpa 16S rRNA gene, strain PCC... 149 1e-32
474emb|AJ781138.1| Nodularia spumigena 16S rRNA gene, strain AV63 149 1e-32
475emb|AJ781137.1| Nodularia spumigena 16S rRNA gene, strain F81 149 1e-32
476emb|AJ781136.1| Nodularia spumigena 16S rRNA gene, strain AV1 149 1e-32
477emb|AJ781135.1| Nodularia spumigena 16S rRNA gene, strain Huebel... 149 1e-32
478emb|AJ781134.1| Nodularia spumigena 16S rRNA gene, strain HEM 149 1e-32
479emb|AJ781133.1| Nodularia spumigena 16S rRNA gene, strain Huebel... 149 1e-32
480emb|AJ781132.1| Nodularia spumigena 16S rRNA gene, strain Huebel... 149 1e-32
481emb|AJ781131.1| Nodularia spumigena 16S rRNA gene, strain PCC9350 149 1e-32
482emb|AJ630458.1| Anabaena augstumalis SCMIDKE JAHNKE/4a partial 1... 149 1e-32
483emb|AJ630455.1| Trichormus doliolum str. 'doliolum 1' partial 16... 149 1e-32
484emb|AJ630453.1| Nostoc sp. 1tu14s8 partial 16S rRNA gene, strain... 149 1e-32
485emb|AJ630452.1| Nostoc muscorum II partial 16S rRNA gene, strain II 149 1e-32
486emb|AJ630451.1| Nostoc muscorum I partial 16S rRNA gene, strain I 149 1e-32
487emb|AJ630450.1| Nostoc ellipsosporum V partial 16S rRNA gene, st... 149 1e-32
488emb|AJ630448.1| Nostoc calcicola VI partial 16S rRNA gene, strai... 149 1e-32
489emb|AJ630447.1| Nostoc calcicola III partial 16S rRNA gene, stra... 149 1e-32
490emb|AJ630437.1| Anabaena sp. 1tu34s7 partial 16S rRNA gene, stra... 149 1e-32
491emb|AJ630428.1| Anabaena oscillarioides BO HINDAK 1984/43 partia... 149 1e-32
492gb|AF448075.1| Synechococcus sp. HOG 16S ribosomal RNA gene, par... 149 1e-32
493gb|AF448074.1| Synechococcus sp. UH7 16S ribosomal RNA gene, par... 149 1e-32
494gb|DQ416458.1| Uncultured bacterium clone w2uc23 16S ribosomal R... 149 1e-32
495dbj|AB075999.1| Trichodesmium sp. IMS101 gene for 16S rRNA, part... 149 1e-32
496dbj|AB075997.1| Symploca atlantica PCC 8002 gene for 16S rRNA, p... 149 1e-32
497dbj|AB075992.1| Nostoc sp. PCC 7906 gene for 16S rRNA, partial s... 149 1e-32
498dbj|AB075991.1| Nodularia sp. KAC 17 gene for 16S rRNA, partial ... 149 1e-32
499dbj|AB075990.1| Nodularia sp. 'WH Baltic Sea isolate' gene for 1... 149 1e-32
500dbj|AB075983.1| Cylindrospermum licheniforme UTEX 2014 gene for ... 149 1e-32

>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome
          Length = 569630

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328572 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 328513

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328512 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 328453

                                                                          
Query: 122    tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328452 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 328393

                      
Query: 182    gagaggat 189
              ||||||||
Sbjct: 328392 gagaggat 328385



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 64/75 (85%)
 Strand = Plus / Minus

                                                                          
Query: 46     acaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaac 105
              ||||||| ||||||||||||||||||||||| ||| || |||| ||| |||||    |||
Sbjct: 420496 acaggtgctgcatggctgtcgtcagctcgtgtcgtgagatgtttggtcaagtcctataac 420437

                             
Query: 106    gagcgcaaccctcgt 120
              ||||| |||||||||
Sbjct: 420436 gagcgaaaccctcgt 420422



to top

>gb|DQ490950.1| Festuca arundinacea 16S ribosomal RNA gene, partial sequence;
           chloroplast
          Length = 812

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 484

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 424

                                                                       
Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 364

                   
Query: 182 gagaggat 189
           ||||||||
Sbjct: 363 gagaggat 356



to top

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
              complete genome
          Length = 134551

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122901 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 122842

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122841 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 122782

                                                                          
Query: 122    tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122781 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 122722

                      
Query: 182    gagaggat 189
              ||||||||
Sbjct: 122721 gagaggat 122714



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92255 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 92314

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92315 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 92374

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92375 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 92434

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 92435 gagaggat 92442



to top

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
              complete genome
          Length = 134551

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122901 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 122842

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122841 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 122782

                                                                          
Query: 122    tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122781 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 122722

                      
Query: 182    gagaggat 189
              ||||||||
Sbjct: 122721 gagaggat 122714



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92255 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 92314

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92315 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 92374

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92375 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 92434

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 92435 gagaggat 92442



to top

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete
              genome
          Length = 134496

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122850 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 122791

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122790 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 122731

                                                                          
Query: 122    tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122730 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 122671

                      
Query: 182    gagaggat 189
              ||||||||
Sbjct: 122670 gagaggat 122663



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92200 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 92259

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92260 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 92319

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92320 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 92379

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 92380 gagaggat 92387



to top

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126628 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 126569

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126568 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 126509

                                                                          
Query: 122    tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126508 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 126449

                      
Query: 182    gagaggat 189
              ||||||||
Sbjct: 126448 gagaggat 126441



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96109 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 96168

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96169 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 96228

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96229 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 96288

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 96289 gagaggat 96296



to top

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122871 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 122812

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122811 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 122752

                                                                          
Query: 122    tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122751 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 122692

                      
Query: 182    gagaggat 189
              ||||||||
Sbjct: 122691 gagaggat 122684



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92247 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 92306

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92307 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 92366

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92367 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 92426

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 92427 gagaggat 92434



to top

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
              complete sequence
          Length = 145980

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119300 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 119359

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119360 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 119419

                                                                          
Query: 122    tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119420 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 119479

                      
Query: 182    gagaggat 189
              ||||||||
Sbjct: 119480 gagaggat 119487



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87425 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 87484

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87485 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 87544

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87545 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 87604

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 87605 gagaggat 87612



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11022 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 11081

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11082 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 11141

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11142 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 11201

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 11202 gagaggat 11209



to top

>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21,
              complete sequence
          Length = 167113

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137830 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 137889

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137890 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 137949

                                                                          
Query: 122    tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137950 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 138009

                      
Query: 182    gagaggat 189
              ||||||||
Sbjct: 138010 gagaggat 138017



to top

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90438 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 90497

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90498 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 90557

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90558 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 90617

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 90618 gagaggat 90625



to top

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47858 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 47799

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47798 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 47739

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47738 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 47679

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 47678 gagaggat 47671



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17260 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 17319

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17320 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 17379

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17380 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 17439

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 17440 gagaggat 17447



to top

>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
             chromosome 10, complete sequence
          Length = 134933

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61595 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61536

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61535 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 61476

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61475 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 61416

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 61415 gagaggat 61408



to top

>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24502 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 24561

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24562 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 24621

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24622 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 24681

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 24682 gagaggat 24689



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                           
Query: 3       cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
               |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9265180 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 9265239

                                                                           
Query: 62      tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9265240 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 9265299

                                                                           
Query: 122     tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9265300 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 9265359

                       
Query: 182     gagaggat 189
               ||||||||
Sbjct: 9265360 gagaggat 9265367



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                           
Query: 3       cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
               |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9224680 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 9224739

                                                                           
Query: 62      tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9224740 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 9224799

                                                                           
Query: 122     tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9224800 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 9224859

                       
Query: 182     gagaggat 189
               ||||||||
Sbjct: 9224860 gagaggat 9224867



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                           
Query: 3       cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
               |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9206352 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 9206411

                                                                           
Query: 62      tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9206412 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 9206471

                                                                           
Query: 122     tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9206472 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 9206531

                       
Query: 182     gagaggat 189
               ||||||||
Sbjct: 9206532 gagaggat 9206539



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                           
Query: 3       cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
               |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9161274 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 9161333

                                                                           
Query: 62      tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9161334 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 9161393

                                                                           
Query: 122     tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9161394 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 9161453

                       
Query: 182     gagaggat 189
               ||||||||
Sbjct: 9161454 gagaggat 9161461



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                           
Query: 3       cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
               |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9129399 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 9129458

                                                                           
Query: 62      tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9129459 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 9129518

                                                                           
Query: 122     tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9129519 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 9129578

                       
Query: 182     gagaggat 189
               ||||||||
Sbjct: 9129579 gagaggat 9129586



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                           
Query: 3       cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
               |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9053096 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 9053155

                                                                           
Query: 62      tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9053156 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 9053215

                                                                           
Query: 122     tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9053216 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 9053275

                       
Query: 182     gagaggat 189
               ||||||||
Sbjct: 9053276 gagaggat 9053283



 Score =  335 bits (169), Expect = 9e-89
 Identities = 182/185 (98%), Gaps = 1/185 (0%)
 Strand = Plus / Minus

                                                                            
Query: 6        gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64
                ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 23619305 gaatcctcttgaaagagaggggtgccctcgggaacgcgaacacaggtggtgcatggctgt 23619246

                                                                            
Query: 65       cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23619245 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 23619186

                                                                            
Query: 125      agttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggag 184
                |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 23619185 agttgccactatgagtttggaaccctaaacagaccgccggtgttaagccggaggaaggag 23619126

                     
Query: 185      aggat 189
                |||||
Sbjct: 23619125 aggat 23619121



to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                            
Query: 3        cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
                |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19935167 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 19935226

                                                                            
Query: 62       tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19935227 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 19935286

                                                                            
Query: 122      tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19935287 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 19935346

                        
Query: 182      gagaggat 189
                ||||||||
Sbjct: 19935347 gagaggat 19935354



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                            
Query: 3        cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
                |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10384046 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 10384105

                                                                            
Query: 62       tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10384106 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 10384165

                                                                            
Query: 122      tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10384166 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 10384225

                        
Query: 182      gagaggat 189
                ||||||||
Sbjct: 10384226 gagaggat 10384233



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                            
Query: 3        cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
                |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10280270 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 10280211

                                                                            
Query: 62       tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10280210 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 10280151

                                                                            
Query: 122      tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10280150 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 10280091

                        
Query: 182      gagaggat 189
                ||||||||
Sbjct: 10280090 gagaggat 10280083



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                            
Query: 3        cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
                |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14179517 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 14179458

                                                                            
Query: 62       tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14179457 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 14179398

                                                                            
Query: 122      tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14179397 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 14179338

                        
Query: 182      gagaggat 189
                ||||||||
Sbjct: 14179337 gagaggat 14179330



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                            
Query: 3        cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
                |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14346440 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 14346499

                                                                            
Query: 62       tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14346500 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 14346559

                                                                            
Query: 122      tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14346560 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 14346619

                        
Query: 182      gagaggat 189
                ||||||||
Sbjct: 14346620 gagaggat 14346627



 Score =  325 bits (164), Expect = 8e-86
 Identities = 183/188 (97%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 808121 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaagtggtgcatggc 808062

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808061 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 808002

                                                                          
Query: 122    tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
              || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 808001 ttaagttgccactatgagtttggaaccctgaacagcccgccggtgttaagccggaggaag 807942

                      
Query: 182    gagaggat 189
               |||||||
Sbjct: 807941 tagaggat 807934



 Score =  218 bits (110), Expect = 1e-53
 Identities = 134/142 (94%)
 Strand = Plus / Plus

                                                                            
Query: 48       aggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacga 107
                ||||||||||||| |||||||||||||||  |||||||||||| |||||||||||||| |
Sbjct: 11194980 aggtggtgcatggttgtcgtcagctcgtgttgtaaggtgttggtttaagtctcgcaacaa 11195039

                                                                            
Query: 108      gcgcaaccctcgtgtttagttgccactatgagtttggaaccctgaacagaccgccggtgt 167
                ||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 11195040 gcgcaacactcatgtttagttgccattatgagtttggaaccctgaacagaccgccggtgt 11195099

                                      
Query: 168      taagccggaggaaggagaggat 189
                ||||||||||||||||||||||
Sbjct: 11195100 taagccggaggaaggagaggat 11195121



to top

>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete
             sequence
          Length = 116932

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50876 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 50817

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50816 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 50757

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50756 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 50697

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 50696 gagaggat 50689



to top

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126697 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 126638

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126637 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 126578

                                                                          
Query: 122    tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126577 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 126518

                      
Query: 182    gagaggat 189
              ||||||||
Sbjct: 126517 gagaggat 126510



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96140 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 96199

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96200 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 96259

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96260 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 96319

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 96320 gagaggat 96327



to top

>gb|AF176637.1|AF176637 Plastid transformation vector pMSK49 plastid targeting region
          Length = 5270

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 325

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 265

                                                                       
Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 205

                   
Query: 182 gagaggat 189
           ||||||||
Sbjct: 204 gagaggat 197



to top

>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0067K15
          Length = 160162

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64398 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 64339

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64338 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 64279

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64278 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 64219

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 64218 gagaggat 64211



to top

>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0022A24
          Length = 148347

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68362 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 68421

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68422 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 68481

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68482 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 68541

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 68542 gagaggat 68549



to top

>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon
          Length = 8862

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2462 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 2521

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2522 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 2581

                                                                        
Query: 122  tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2582 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 2641

                    
Query: 182  gagaggat 189
            ||||||||
Sbjct: 2642 gagaggat 2649



to top

>dbj|AK108725.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-C09, full
           insert sequence
          Length = 1602

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 669

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 729

                                                                       
Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 789

                   
Query: 182 gagaggat 189
           ||||||||
Sbjct: 790 gagaggat 797



to top

>dbj|AK105341.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-G10, full
           insert sequence
          Length = 1448

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 583

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 643

                                                                       
Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 703

                   
Query: 182 gagaggat 189
           ||||||||
Sbjct: 704 gagaggat 711



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                            
Query: 3        cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
                |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19946443 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 19946502

                                                                            
Query: 62       tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19946503 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 19946562

                                                                            
Query: 122      tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19946563 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 19946622

                        
Query: 182      gagaggat 189
                ||||||||
Sbjct: 19946623 gagaggat 19946630



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                            
Query: 3        cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
                |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10390085 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 10390144

                                                                            
Query: 62       tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10390145 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 10390204

                                                                            
Query: 122      tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10390205 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 10390264

                        
Query: 182      gagaggat 189
                ||||||||
Sbjct: 10390265 gagaggat 10390272



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                            
Query: 3        cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
                |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10286309 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 10286250

                                                                            
Query: 62       tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10286249 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 10286190

                                                                            
Query: 122      tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10286189 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 10286130

                        
Query: 182      gagaggat 189
                ||||||||
Sbjct: 10286129 gagaggat 10286122



to top

>emb|AJ555400.1|TTU555400 Triticum turgidum subsp. dicoccum partial chloroplast 16S rRNA gene
          Length = 1483

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941  cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 1000

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 1060

                                                                        
Query: 122  tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 1120

                    
Query: 182  gagaggat 189
            ||||||||
Sbjct: 1121 gagaggat 1128



to top

>emb|AJ555402.1|ATA555402 Aegilops tauschii partial chloroplast 16S rRNA gene
          Length = 1483

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941  cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 1000

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 1060

                                                                        
Query: 122  tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 1120

                    
Query: 182  gagaggat 189
            ||||||||
Sbjct: 1121 gagaggat 1128



to top

>emb|AJ555401.1|ASP555401 Aegilops speltoides partial chloroplast 16S rRNA gene
          Length = 1483

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941  cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 1000

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 1060

                                                                        
Query: 122  tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 1120

                    
Query: 182  gagaggat 189
            ||||||||
Sbjct: 1121 gagaggat 1128



to top

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127414 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 127355

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127354 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 127295

                                                                          
Query: 122    tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127294 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 127235

                      
Query: 182    gagaggat 189
              ||||||||
Sbjct: 127234 gagaggat 127227



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96817 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 96876

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96877 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 96936

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96937 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 96996

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 96997 gagaggat 97004



to top

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122844 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 122785

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122784 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 122725

                                                                          
Query: 122    tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122724 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 122665

                      
Query: 182    gagaggat 189
              ||||||||
Sbjct: 122664 gagaggat 122657



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92195 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 92254

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92255 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 92314

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92315 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 92374

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 92375 gagaggat 92382



to top

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122894 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 122835

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122834 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 122775

                                                                          
Query: 122    tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122774 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 122715

                      
Query: 182    gagaggat 189
              ||||||||
Sbjct: 122714 gagaggat 122707



 Score =  357 bits (180), Expect = 2e-95
 Identities = 187/188 (99%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92000 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 92059

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92060 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 92119

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92120 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 92179

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 92180 gagaggat 92187



to top

>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07,
             complete sequence
          Length = 164477

 Score =  349 bits (176), Expect = 6e-93
 Identities = 186/188 (98%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88615 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 88556

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88555 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 88496

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 88495 tttagttgccactatgagtttggaaccctgaacaaaccgccggtgttaagccggaggaag 88436

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 88435 gagaggat 88428



to top

>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBa0034M22, complete sequence
          Length = 149435

 Score =  349 bits (176), Expect = 6e-93
 Identities = 186/188 (98%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 126437 cgcgaatcctcttgaaagagaggggtgccctcgggaacccggacacaggtggtgcatggc 126378

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126377 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 126318

                                                                          
Query: 122    tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126317 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 126258

                      
Query: 182    gagaggat 189
              ||||||||
Sbjct: 126257 gagaggat 126250



to top

>gb|DQ129641.1| Uncultured bacterium clone AKIW1139 16S ribosomal RNA gene, partial
            sequence
          Length = 1444

 Score =  349 bits (176), Expect = 6e-93
 Identities = 186/188 (98%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937  cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 996

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 1056

                                                                        
Query: 122  tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1057 tttagttgccactatgagtttggaaccctgaatagaccgccggtgttaagccggaggaag 1116

                    
Query: 182  gagaggat 189
            ||||||||
Sbjct: 1117 gagaggat 1124



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  349 bits (176), Expect = 6e-93
 Identities = 186/188 (98%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                           
Query: 3       cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
               |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9244815 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 9244756

                                                                           
Query: 62      tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9244755 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 9244696

                                                                           
Query: 122     tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
               |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 9244695 tttagttgccactatgagtttggaaccctgaacagaccgctggtgttaagccggaggaag 9244636

                       
Query: 182     gagaggat 189
               ||||||||
Sbjct: 9244635 gagaggat 9244628



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 164      gtgttaagccggaggaaggagaggat 189
                |||||||||| |||||||||||||||
Sbjct: 11864611 gtgttaagccagaggaaggagaggat 11864586



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  349 bits (176), Expect = 6e-93
 Identities = 186/188 (98%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                            
Query: 3        cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
                |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 12828978 cgcgaatcctcttgaaagagaggggtgccctcgggaacccggacacaggtggtgcatggc 12828919

                                                                            
Query: 62       tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12828918 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 12828859

                                                                            
Query: 122      tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12828858 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 12828799

                        
Query: 182      gagaggat 189
                ||||||||
Sbjct: 12828798 gagaggat 12828791



 Score =  349 bits (176), Expect = 6e-93
 Identities = 186/188 (98%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884191 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 884132

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884131 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 884072

                                                                          
Query: 122    tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
              |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 884071 tttagttgccactatgagtttggaaccctgaacaaaccgccggtgttaagccggaggaag 884012

                      
Query: 182    gagaggat 189
              ||||||||
Sbjct: 884011 gagaggat 884004



to top

>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score =  349 bits (176), Expect = 6e-93
 Identities = 186/188 (98%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56028 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 55969

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55968 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 55909

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 55908 tttagttgccactatgagtttggaaccctgaacagaccgctggtgttaagccggaggaag 55849

                     
Query: 182   gagaggat 189
             ||||||||
Sbjct: 55848 gagaggat 55841



to top

>emb|AJ239003.1|TAE239003 Triticum aestivum (L.) partial chloroplast 16S rRNA gene
          Length = 1482

 Score =  349 bits (176), Expect = 6e-93
 Identities = 186/188 (98%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940  cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 999

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1000 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaacccttgtg 1059

                                                                        
Query: 122  tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1060 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 1119

                    
Query: 182  gagaggat 189
            ||||||||
Sbjct: 1120 gagaggat 1127



to top

>dbj|AB240470.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:
            SRRT24
          Length = 1478

 Score =  341 bits (172), Expect = 1e-90
 Identities = 185/188 (98%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 966  cgcgaatcctcttgaaagagaggagtgcccttgggaacgcggacacaggtggtgcatggc 1025

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 1085

                                                                        
Query: 122  tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 1145

                    
Query: 182  gagaggat 189
            ||||||||
Sbjct: 1146 gagaggat 1153



to top

>gb|DQ417650.1| Festuca ovina 16S ribosomal RNA gene, partial sequence; plastid
          Length = 1409

 Score =  337 bits (170), Expect = 2e-89
 Identities = 173/174 (99%)
 Strand = Plus / Plus

                                                                        
Query: 16   gaagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgt 75
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927  gaagagaggggtgcccttgggaacgcggacacaggtggtgcatggctgtcgtcagctcgt 986

                                                                        
Query: 76   gccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta 135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987  gccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta 1046

                                                                  
Query: 136  tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 1100



to top

>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
             complete sequence
          Length = 130273

 Score =  335 bits (169), Expect = 9e-89
 Identities = 182/185 (98%), Gaps = 1/185 (0%)
 Strand = Plus / Minus

                                                                         
Query: 6     gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64
             ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61986 gaatcctcttgaaagagaggggtgccctcgggaacgcgaacacaggtggtgcatggctgt 61927

                                                                         
Query: 65    cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61926 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 61867

                                                                         
Query: 125   agttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggag 184
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61866 agttgccactatgagtttggaaccctaaacagaccgccggtgttaagccggaggaaggag 61807

                  
Query: 185   aggat 189
             |||||
Sbjct: 61806 aggat 61802



to top

>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1442_E05
          Length = 162407

 Score =  325 bits (164), Expect = 8e-86
 Identities = 183/188 (97%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 17329 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaagtggtgcatggc 17270

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17269 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 17210

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 17209 ttaagttgccactatgagtttggaaccctgaacagcccgccggtgttaagccggaggaag 17150

                     
Query: 182   gagaggat 189
              |||||||
Sbjct: 17149 tagaggat 17142



to top

>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0036E06
          Length = 137926

 Score =  325 bits (164), Expect = 8e-86
 Identities = 183/188 (97%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 86252 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaagtggtgcatggc 86193

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86192 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 86133

                                                                         
Query: 122   tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 86132 ttaagttgccactatgagtttggaaccctgaacagcccgccggtgttaagccggaggaag 86073

                     
Query: 182   gagaggat 189
              |||||||
Sbjct: 86072 tagaggat 86065



to top

>gb|DQ417649.1| Agrostis capillaris 16S ribosomal RNA gene, partial sequence; plastid
          Length = 1406

 Score =  321 bits (162), Expect = 1e-84
 Identities = 179/182 (98%), Gaps = 2/182 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 913  cgcgaatcctcttgaaagagaggggtgcccttggga-cgcggacacaggtggtgcatggc 971

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 1031

                                                                        
Query: 122  tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1032 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 1091

              
Query: 182  ga 183
            ||
Sbjct: 1092 ga 1093



to top

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score =  295 bits (149), Expect = 7e-77
 Identities = 181/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 142424 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 142365

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 142364 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 142305

                                                                          
Query: 122    tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              |||||||||||| | ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 142304 tttagttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaa 142245

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 142244 ggtgaggat 142236



 Score =  295 bits (149), Expect = 7e-77
 Identities = 181/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 107521 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 107580

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 107581 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 107640

                                                                          
Query: 122    tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              |||||||||||| | ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 107641 tttagttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaa 107700

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 107701 ggtgaggat 107709



to top

>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score =  295 bits (149), Expect = 7e-77
 Identities = 181/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 145095 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 145036

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 145035 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 144976

                                                                          
Query: 122    tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              |||||||||||| | ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 144975 tttagttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaa 144916

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 144915 ggtgaggat 144907



 Score =  295 bits (149), Expect = 7e-77
 Identities = 181/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 108562 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 108621

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 108622 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 108681

                                                                          
Query: 122    tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              |||||||||||| | ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 108682 tttagttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaa 108741

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 108742 ggtgaggat 108750



to top

>gb|DQ000201.1| Trewia nudiflora 16S ribosomal RNA gene, partial sequence;
            chloroplast
          Length = 1434

 Score =  295 bits (149), Expect = 7e-77
 Identities = 181/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921  cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 980

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 981  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1040

                                                                        
Query: 122  tttagttgccact-atgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||||||  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 1041 tttagttgccactgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1100

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1101 ggtgaggat 1109



to top

>gb|AF244560.1|AF244560 Nymphaea tuberosa 16S ribosomal RNA gene, partial sequence;
            chloroplast gene for chloroplast product
          Length = 1463

 Score =  295 bits (149), Expect = 7e-77
 Identities = 181/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 932  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 991

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 992  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1051

                                                                        
Query: 122  tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||||| | ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 1052 tttagttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaa 1111

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1112 ggtgaggat 1120



to top

>gb|AF244557.1|AF244557 Magnolia x soulangeana 16S ribosomal RNA gene, partial sequence;
            chloroplast gene for chloroplast product
          Length = 1456

 Score =  295 bits (149), Expect = 7e-77
 Identities = 181/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 925  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 984

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 985  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1044

                                                                        
Query: 122  tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||||| | ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 1045 tttagttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaa 1104

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1105 ggtgaggat 1113



to top

>emb|V00165.1|CHNTRN1 Tobacco chloroplast genes for 16S ribosomal RNA and tRNA-Val
          Length = 2113

 Score =  295 bits (149), Expect = 7e-77
 Identities = 181/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1573 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 1632

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1633 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1692

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1693 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgttaagccggaggaa 1752

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1753 ggtgaggat 1761



to top

>gb|AY168732.2| Angiosperm environmental sample clone Hot Creek 1 16S ribosomal RNA
           gene, partial sequence; chloroplast
          Length = 1451

 Score =  295 bits (149), Expect = 7e-77
 Identities = 181/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 511 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 452

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 451 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 392

                                                                       
Query: 122 tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           |||||||||||| | ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 391 tttagttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaa 332

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 331 ggtgaggat 323



to top

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score =  289 bits (146), Expect = 5e-75
 Identities = 178/186 (95%), Gaps = 2/186 (1%)
 Strand = Plus / Minus

                                                                          
Query: 6      gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64
              ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 137929 gaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggctgt 137870

                                                                          
Query: 65     cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124
              |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 137869 cgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgttt 137810

                                                                          
Query: 125    agttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183
              ||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||||| 
Sbjct: 137809 agttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaaggt 137750

                    
Query: 184    gaggat 189
              ||||||
Sbjct: 137749 gaggat 137744



 Score =  289 bits (146), Expect = 5e-75
 Identities = 178/186 (95%), Gaps = 2/186 (1%)
 Strand = Plus / Plus

                                                                          
Query: 6      gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64
              ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 102353 gaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggctgt 102412

                                                                          
Query: 65     cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124
              |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 102413 cgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgttt 102472

                                                                          
Query: 125    agttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183
              ||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||||| 
Sbjct: 102473 agttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaaggt 102532

                    
Query: 184    gaggat 189
              ||||||
Sbjct: 102533 gaggat 102538



to top

>gb|DQ013044.1| Lactuca sativa NADH dehydrogenase subunit 2 (ndhB) gene, partial cds;
            ribosomal protein S7 (rps7) gene, complete cds; ribosomal
            protein S12 (rps12) gene, partial cds; tRNA-Val, 16S
            ribosomal RNA, tRNA-Ile, and tRNA-Ala genes, complete
            sequence; 23S ribosomal RNA gene, partial sequence; and
            unknown gene; chloroplast
          Length = 8165

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5155 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 5214

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 5215 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 5274

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 5275 tttagttgccatcattgagtttggaaccctgaacagactgccggtgataagccggaggaa 5334

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 5335 ggtgaggat 5343



to top

>gb|BT014415.1| Lycopersicon esculentum clone 133723R, mRNA sequence
          Length = 1449

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1070 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 1129

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1130 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1189

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 1190 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 1249

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1250 ggtgaggat 1258



to top

>gb|AY563527.1| Camellia sinensis 16S ribosomal RNA gene, partial sequence
          Length = 699

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 264 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 323

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 324 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 383

                                                                       
Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 384 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 443

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 444 ggtgaggat 452



to top

>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome
          Length = 152772

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 135733 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 135674

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 135673 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 135614

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 135613 tttagttgccatcattgagtttggaaccctgaacagactgccggtgataagccggaggaa 135554

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 135553 ggtgaggat 135545



 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 101145 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 101204

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 101205 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 101264

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 101265 tttagttgccatcattgagtttggaaccctgaacagactgccggtgataagccggaggaa 101324

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 101325 ggtgaggat 101333



to top

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 138920 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138861

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 138860 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138801

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 138800 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 138741

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 138740 ggtgaggat 138732



 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 103710 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 103769

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 103770 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 103829

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 103830 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 103889

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 103890 ggtgaggat 103898



to top

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 134463 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 134404

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 134403 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 134344

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 134343 tttagttgccatcattgagtttggaaccctgaacagactgccggtgataagccggaggaa 134284

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 134283 ggtgaggat 134275



 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 100172 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 100231

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 100232 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 100291

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 100292 tttagttgccatcattgagtttggaaccctgaacagactgccggtgataagccggaggaa 100351

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 100352 ggtgaggat 100360



to top

>emb|Y18934.1|CPY18934 Solanum nigrum chloroplast tRNA-Ala, tRNA-Ile, 16S rRNA, tRNA-Val,
            rps12, rps7, ndhB genes
          Length = 7829

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2613 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 2554

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2553 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 2494

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 2493 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 2434

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 2433 ggtgaggat 2425



to top

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 134550 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 134491

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 134490 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 134431

                                                                          
Query: 122    tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              |||||||||| ||  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 134430 tttagttgccaacgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 134371

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 134370 ggtgaggat 134362



 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 98895 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 98954

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 98955 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 99014

                                                                         
Query: 122   tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
             |||||||||| ||  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 99015 tttagttgccaacgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 99074

                      
Query: 181   ggagaggat 189
             || ||||||
Sbjct: 99075 ggtgaggat 99083



to top

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 139540 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 139481

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 139480 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 139421

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 139420 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 139361

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 139360 ggtgaggat 139352



 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 104017 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 104076

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 104077 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 104136

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 104137 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 104196

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 104197 ggtgaggat 104205



to top

>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence
          Length = 163935

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 146378 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 146319

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 146318 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 146259

                                                                          
Query: 122    tttagttgccact-atgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 146258 tttagttgccaatgttgagtttggaaccctgaacagactgccggtgctaagccggaggaa 146199

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 146198 ggcgaggat 146190



 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 106950 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 107009

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 107010 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 107069

                                                                          
Query: 122    tttagttgccact-atgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 107070 tttagttgccaatgttgagtttggaaccctgaacagactgccggtgctaagccggaggaa 107129

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 107130 ggcgaggat 107138



to top

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 138282 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138223

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 138222 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138163

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 138162 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 138103

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 138102 ggtgaggat 138094



 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 102754 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 102813

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 102814 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 102873

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 102874 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 102933

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 102934 ggtgaggat 102942



to top

>gb|DQ401208.1| Uncultured Pseudomonas sp. clone cloMSN28 16S ribosomal RNA gene,
           partial sequence
          Length = 563

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 220 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 279

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 280 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 339

                                                                       
Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 340 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 399

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 400 ggtgaggat 408



to top

>dbj|AB075086.1| Uncultured bacterium gene for 16S rRNA, partial sequence,
           clone:KCR15
          Length = 507

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 16  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 75

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 76  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 135

                                                                       
Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 136 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 195

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 196 ggtgaggat 204



to top

>dbj|AB075075.1| Uncultured bacterium gene for 16S rRNA, partial sequence,
           clone:KCR3
          Length = 507

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 16  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 75

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 76  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 135

                                                                       
Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 136 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 195

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 196 ggtgaggat 204



to top

>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 135733 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 135674

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 135673 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 135614

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 135613 tttagttgccaccgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 135554

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 135553 ggtgaggat 135545



 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 101031 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 101090

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 101091 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 101150

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 101151 tttagttgccaccgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 101210

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 101211 ggtgaggat 101219



to top

>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7
             gene region
          Length = 47249

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 43272 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 43331

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 43332 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 43391

                                                                         
Query: 122   tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
             |||||||||| ||  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 43392 tttagttgccaacgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 43451

                      
Query: 181   ggagaggat 189
             || ||||||
Sbjct: 43452 ggtgaggat 43460



to top

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 139540 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 139481

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 139480 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 139421

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 139420 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 139361

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 139360 ggtgaggat 139352



 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 102885 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 102944

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 102945 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 103004

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 103005 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 103064

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 103065 ggtgaggat 103073



to top

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 138418 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138359

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 138358 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138299

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 138298 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 138239

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 138238 ggtgaggat 138230



 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 102925 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 102984

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 102985 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 103044

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 103045 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 103104

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 103105 ggtgaggat 103113



to top

>gb|DQ211347.1| Plastid transformation vector pPRV110L, complete sequence
          Length = 4128

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3752 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 3811

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3812 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 3871

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 3872 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 3931

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 3932 ggtgaggat 3940



to top

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 138416 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138357

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 138356 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138297

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 138296 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 138237

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 138236 ggtgaggat 138228



 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 102922 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 102981

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 102982 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 103041

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 103042 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 103101

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 103102 ggtgaggat 103110



to top

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 138327 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138268

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 138267 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138208

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 138207 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 138148

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 138147 ggtgaggat 138139



 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 102801 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 102860

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 102861 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 102920

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 102921 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 102980

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 102981 ggtgaggat 102989



to top

>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
              strain:Columbia
          Length = 154478

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 136689 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 136630

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 136629 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 136570

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 136569 tttagttgccaccgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 136510

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 136509 ggtgaggat 136501



 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 101960 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 102019

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 102020 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 102079

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 102080 tttagttgccaccgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 102139

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 102140 ggtgaggat 102148



to top

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 138918 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138859

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 138858 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138799

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 138798 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 138739

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 138738 ggtgaggat 138730



 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 103708 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 103767

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 103768 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 103827

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 103828 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 103887

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 103888 ggtgaggat 103896



to top

>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome
          Length = 152765

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 135726 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 135667

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 135666 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 135607

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 135606 tttagttgccatcattgagtttggaaccctgaacagactgccggtgataagccggaggaa 135547

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 135546 ggtgaggat 135538



 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 101143 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 101202

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 101203 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 101262

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 101263 tttagttgccatcattgagtttggaaccctgaacagactgccggtgataagccggaggaa 101322

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 101323 ggtgaggat 101331



to top

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 138659 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138600

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 138599 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138540

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 138539 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 138480

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 138479 ggtgaggat 138471



 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 103479 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 103538

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 103539 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 103598

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 103599 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 103658

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 103659 ggtgaggat 103667



to top

>emb|Y10178.1|CPAC16SR A.cepa chloroplast 16S rRNA gene
          Length = 678

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 204 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 263

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtcgtcagcccgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 323

                                                                       
Query: 122 tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           |||||||||||| | ||||| ||||||||||||||||| ||||||| |||||||||||||
Sbjct: 324 tttagttgccaccattgagtgtggaaccctgaacagactgccggtgataagccggaggaa 383

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 384 ggtgaggat 392



to top

>emb|X70938.1|CHNPTRNVI N.plumbaginifolia chloroplast 16SrDNA, trnV and trnI genes for 16S
            ribosomal RNA, transfer RNA-Val and transfer RNA-Ile
            (5'exon)
          Length = 3274

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2173 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 2232

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2233 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 2292

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 2293 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 2352

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 2353 ggtgaggat 2361



to top

>gb|U12815.1|XXU12815 Transformation vector pPRV112B, plastid targeting segment
          Length = 4126

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 377 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 318

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 317 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 258

                                                                       
Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 257 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 198

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 197 ggtgaggat 189



to top

>gb|U12814.1|XXU12814 Transformation vector pPRV112A, plastid targeting segment
          Length = 4126

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 377 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 318

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 317 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 258

                                                                       
Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 257 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 198

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 197 ggtgaggat 189



to top

>gb|U12813.1|XXU12813 Transformation vector pPRV111B, plastid targeting segment
          Length = 4174

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 377 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 318

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 317 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 258

                                                                       
Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 257 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 198

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 197 ggtgaggat 189



to top

>gb|U12812.1|XXU12812 Transformation vector pPRV111A, plastid targeting segment
          Length = 4174

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 377 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 318

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 317 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 258

                                                                       
Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 257 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 198

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 197 ggtgaggat 189



to top

>gb|U12811.1|XXU12811 Transformation vector pPRV100B, plastid targeting segment
          Length = 3019

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 377 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 318

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 317 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 258

                                                                       
Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 257 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 198

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 197 ggtgaggat 189



to top

>gb|U12810.1|XXU12810 Transformation vector pPRV100A, plastid targeting segment
          Length = 3019

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 377 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 318

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 317 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 258

                                                                       
Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 257 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 198

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 197 ggtgaggat 189



to top

>gb|U12809.1|XXU12809 Transformation vector pPRV1, plastid targeting seqment
          Length = 2962

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 377 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 318

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 317 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 258

                                                                       
Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 257 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 198

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 197 ggtgaggat 189



to top

>gb|L37580.1|RCNRGD Ricinis communis 16S ribosomal RNA (16S rRNA) gene
          Length = 1423

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 926  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 985

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 986  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1045

                                                                        
Query: 122  tttagttgccact-atgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||||||  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 1046 tttagttgccactgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1105

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1106 ggtgaggat 1114



to top

>gb|M82900.1|TOBCP16SRD Nicotiana plumbaginifolia 16S rRNA gene
          Length = 1490

 Score =  287 bits (145), Expect = 2e-74
 Identities = 180/189 (95%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 949  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 1008

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1009 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1068

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 1069 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 1128

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1129 ggtgaggat 1137



to top

>gb|DQ187922.1| Uncultured phototrophic eukaryote clone 90 16S ribosomal RNA gene,
           partial sequence
          Length = 927

 Score =  281 bits (142), Expect = 1e-72
 Identities = 177/186 (95%), Gaps = 2/186 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64
           ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 734 gaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggctgt 793

                                                                       
Query: 65  cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 794 cgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgttt 853

                                                                       
Query: 125 agttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183
           ||||||||| | |||||| |||||||||||||||| ||||||| ||||||||||||||| 
Sbjct: 854 agttgccaccattgagttcggaaccctgaacagactgccggtgataagccggaggaaggt 913

                 
Query: 184 gaggat 189
           ||||||
Sbjct: 914 gaggat 919



to top

>dbj|AB200661.1| uncultured bacterium gene for 16S rRNA, partial sequence, clone:
           G32
          Length = 960

 Score =  281 bits (142), Expect = 1e-72
 Identities = 174/182 (95%), Gaps = 2/182 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 469 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 528

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 529 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 588

                                                                       
Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 589 tttagttgccaccgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 648

             
Query: 181 gg 182
           ||
Sbjct: 649 gg 650



to top

>dbj|AB075082.1| Uncultured bacterium gene for 16S rRNA, partial sequence,
           clone:KCR11
          Length = 507

 Score =  281 bits (142), Expect = 1e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           ||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 16  cgcgaatnctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 75

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 76  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 135

                                                                       
Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 136 tttagttgccatcgttgagtttggaaccctgaacagactgccggtggtaagccggaggaa 195

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 196 ggtgaggat 204



to top

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score =  281 bits (142), Expect = 1e-72
 Identities = 177/186 (95%), Gaps = 2/186 (1%)
 Strand = Plus / Minus

                                                                          
Query: 6      gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64
              ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 130803 gaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggctgt 130744

                                                                          
Query: 65     cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124
              |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 130743 cgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaacccttgtgttt 130684

                                                                          
Query: 125    agttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183
              ||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||||| 
Sbjct: 130683 agttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaaggt 130624

                    
Query: 184    gaggat 189
              ||||||
Sbjct: 130623 gaggat 130618



 Score =  281 bits (142), Expect = 1e-72
 Identities = 177/186 (95%), Gaps = 2/186 (1%)
 Strand = Plus / Plus

                                                                          
Query: 6      gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64
              ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 104119 gaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggctgt 104178

                                                                          
Query: 65     cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124
              |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 104179 cgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaacccttgtgttt 104238

                                                                          
Query: 125    agttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183
              ||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||||| 
Sbjct: 104239 agttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaaggt 104298

                    
Query: 184    gaggat 189
              ||||||
Sbjct: 104299 gaggat 104304



to top

>gb|L37578.1|ADQRGD Adriana glabrata 16S ribosomal RNA (16S rRNA) gene
          Length = 1428

 Score =  281 bits (142), Expect = 1e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 920  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatgnc 979

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 980  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1039

                                                                        
Query: 122  tttagttgccact-atgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||||||  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 1040 tttagttgccactgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1099

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1100 ggtgaggat 1108



to top

>gb|AY818945.1| Plantago rugelii 16S ribosomal RNA (rrn16) gene, partial sequence;
            chloroplast
          Length = 1402

 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 910  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 969

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 970  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1029

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  | ||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 1030 tttagttgccatcgtttagtttggaaccctgaacagactgccggtgataagccggaggaa 1089

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1090 ggtgaggat 1098



to top

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 142490 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 142431

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 142430 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 142371

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 142370 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 142311

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 142310 ggtgaggat 142302



 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 106607 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 106666

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 106667 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 106726

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 106727 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 106786

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 106787 ggtgaggat 106795



to top

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 143319 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 143260

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 143259 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 143200

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 143199 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 143140

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 143139 ggtgaggat 143131



 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 106741 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 106800

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 106801 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 106860

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 106861 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 106920

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 106921 ggtgaggat 106929



to top

>emb|X72584.1|CHCRTRNAV C.reflexa chloroplast genes trnA, trnI, trnV, rps7, rpS12, ndhB and
            16S rDNA
          Length = 8807

 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 2802 cgcgaatcctcttgaaagagaggggtgccttcgggaacgtggacacaggtggtgcatggc 2743

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2742 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 2683

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 2682 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 2623

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 2622 ggtgaggat 2614



to top

>gb|DQ129644.1| Uncultured bacterium clone AKIW961 16S ribosomal RNA gene, partial
            sequence
          Length = 1448

 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 938  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 997

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 998  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1057

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 1058 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1117

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1118 ggtgaggat 1126



to top

>emb|AJ639615.1| Vitis vinifera plastid partial 16S rRNA gene
          Length = 1486

 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 954  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 1013

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1014 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1073

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 1074 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1133

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1134 ggtgaggat 1142



to top

>gb|AF372579.1|AF372579 Lespedeza cuneata 16S ribosomal RNA gene, partial sequence;
           chloroplast gene for chloroplast product
          Length = 700

 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 379 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 320

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 319 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 260

                                                                       
Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           |||||||||| ||  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 259 tttagttgccaacgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 200

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 199 ggtgaggat 191



to top

>gb|AY216521.1| Lycopersicon esculentum tRNA-Val gene, complete sequence; 16S
            ribosomal RNA gene, complete sequence; and tRNA-Ile and
            tRNA-Ala genes, complete sequence; chloroplast genes for
            chloroplast products
          Length = 5206

 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2562 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 2621

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2622 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 2681

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||| ||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 2682 tttagttaccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 2741

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 2742 ggtgaggat 2750



to top

>emb|X73670.1|CHDC16SRR D.carota chloroplast gene for tRNA-Val, 16S rRNA and tRNA-Ile (exon
            1)
          Length = 2192

 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 1246 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgaatggc 1305

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1306 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1365

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 1366 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 1425

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1426 ggtgaggat 1434



to top

>gb|U76911.1|CPU76911 Carica papaya 16S ribosomal RNA, chloroplast gene for chloroplast
            RNA, partial sequence
          Length = 1563

 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 931  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 990

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 991  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1050

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 1051 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1110

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1111 ggtgaggat 1119



to top

>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 133259 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 133200

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 133199 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 133140

                                                                          
Query: 122    tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              |||||||||| ||  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 133139 tttagttgccaacgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 133080

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 133079 ggtgaggat 133071



 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 99197 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 99256

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 99257 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 99316

                                                                         
Query: 122   tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
             |||||||||| ||  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 99317 tttagttgccaacgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 99376

                      
Query: 181   ggagaggat 189
             || ||||||
Sbjct: 99377 ggtgaggat 99385



to top

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 142670 cgcgaatcctcttgaaagagaggtgtgccttcgggaacgcggacacaggtggtgcatggc 142611

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 142610 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 142551

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 142550 tttagttgccaccgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 142491

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 142490 ggtgaggat 142482



 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 106629 cgcgaatcctcttgaaagagaggtgtgccttcgggaacgcggacacaggtggtgcatggc 106688

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 106689 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 106748

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 106749 tttagttgccaccgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 106808

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 106809 ggtgaggat 106817



to top

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 138296 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138237

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 138236 tgtcttcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138177

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 138176 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 138117

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 138116 ggtgaggat 138108



 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 102766 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 102825

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 102826 tgtcttcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 102885

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 102886 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 102945

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 102946 ggtgaggat 102954



to top

>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b,
             complete sequence
          Length = 66087

 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 50004 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 49945

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 49944 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 49885

                                                                         
Query: 122   tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
             |||||||||| ||  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 49884 tttagttgccaacgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 49825

                      
Query: 181   ggagaggat 189
             || ||||||
Sbjct: 49824 ggtgaggat 49816



to top

>emb|AJ278626.1|CRE278626 Cuscuta reflexa chloroplast tRNA-Val(GAC) gene and 16S rRNA gene
          Length = 2191

 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 1338 cgcgaatcctcttgaaagagaggggtgccttcgggaacgtggacacaggtggtgcatggc 1397

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1398 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1457

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 1458 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 1517

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1518 ggtgaggat 1526



to top

>gb|U24585.1|IMU24585 Isoetes melanopoda chloroplast 16S rRNA gene, partial sequence
          Length = 1452

 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttga-agagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            ||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 926  cgcgaatcctcttgagagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 985

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 986  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1045

                                                                        
Query: 122  tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||||| | ||||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct: 1046 tttagttgccaccattgagtttggaaccctaaacagactgccggtgataagccggaggaa 1105

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1106 ggtgaggat 1114



to top

>gb|U03555.1|AIU03555 Alnus incana chloroplast 16S rRNA gene, complete sequence
          Length = 1842

 Score =  280 bits (141), Expect = 4e-72
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1124 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 1183

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1184 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1243

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 1244 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1303

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1304 ggtgaggat 1312



to top

>gb|AY803217.1| Angiosperm environmental sample clone C82 16S ribosomal RNA gene,
           partial sequence; chloroplast
          Length = 545

 Score =  274 bits (138), Expect = 3e-70
 Identities = 177/188 (94%), Gaps = 4/188 (2%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 38  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 97

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 98  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 157

                                                                       
Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
           |||||||||||| ||   | ||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 158 tttagttgccaccat---tgtggaaccctgaacagactgccggtgataagccggaggaag 214

                   
Query: 182 gagaggat 189
           | ||||||
Sbjct: 215 gtgaggat 222



to top

>gb|AY803214.1| Angiosperm environmental sample clone B92 16S ribosomal RNA gene,
           partial sequence; chloroplast
          Length = 546

 Score =  274 bits (138), Expect = 3e-70
 Identities = 177/188 (94%), Gaps = 4/188 (2%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 38  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 97

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 98  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 157

                                                                       
Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
           |||||||||||| ||   | ||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 158 tttagttgccaccat---tgtggaaccctgaacagactgccggtgataagccggaggaag 214

                   
Query: 182 gagaggat 189
           | ||||||
Sbjct: 215 gtgaggat 222



to top

>gb|AY803212.1| Angiosperm environmental sample clone B63 16S ribosomal RNA gene,
           partial sequence; chloroplast
          Length = 546

 Score =  274 bits (138), Expect = 3e-70
 Identities = 177/188 (94%), Gaps = 4/188 (2%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 38  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 97

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 98  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 157

                                                                       
Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
           |||||||||||| ||   | ||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 158 tttagttgccaccat---tgtggaaccctgaacagactgccggtgataagccggaggaag 214

                   
Query: 182 gagaggat 189
           | ||||||
Sbjct: 215 gtgaggat 222



to top

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score =  274 bits (138), Expect = 3e-70
 Identities = 176/186 (94%), Gaps = 2/186 (1%)
 Strand = Plus / Minus

                                                                          
Query: 6      gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64
              ||||||||||||| |||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 137181 gaatcctcttgaaagagaggagtgccttcgggaacacggacacaggtggtgcatggctgt 137122

                                                                          
Query: 65     cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124
              |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 137121 cgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgttt 137062

                                                                          
Query: 125    agttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183
              ||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||||| 
Sbjct: 137061 agttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaaggt 137002

                    
Query: 184    gaggat 189
              ||||||
Sbjct: 137001 gaggat 136996



 Score =  274 bits (138), Expect = 3e-70
 Identities = 176/186 (94%), Gaps = 2/186 (1%)
 Strand = Plus / Plus

                                                                          
Query: 6      gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64
              ||||||||||||| |||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 100790 gaatcctcttgaaagagaggagtgccttcgggaacacggacacaggtggtgcatggctgt 100849

                                                                          
Query: 65     cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124
              |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 100850 cgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgttt 100909

                                                                          
Query: 125    agttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183
              ||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||||| 
Sbjct: 100910 agttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaaggt 100969

                    
Query: 184    gaggat 189
              ||||||
Sbjct: 100970 gaggat 100975



to top

>emb|AJ428862.1|RHI428862 Unidentified cyanobacterium DBD2002 partial 16S rRNA gene
          Length = 757

 Score =  274 bits (138), Expect = 3e-70
 Identities = 180/190 (94%), Gaps = 3/190 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 244 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 303

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccc-tcgt 120
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 304 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaacccttcgt 363

                                                                       
Query: 121 gtttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggagga 179
           |||||||||||| |  ||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 364 gtttagttgccaccgttgagtttggaaccctgaacagactgccggtgataagccggagga 423

                     
Query: 180 aggagaggat 189
           ||| ||||||
Sbjct: 424 aggtgaggat 433



to top

>gb|L37579.1|EUFRGD Euphorbia pulcherrima 16S ribosomal RNA (16S rRNA) gene
          Length = 1420

 Score =  274 bits (138), Expect = 3e-70
 Identities = 177/189 (93%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 923  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatgkc 982

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 983  tgtcgtcagctcgtnccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1042

                                                                        
Query: 122  tttagttgccact-atgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||||||  ||||||||||||||||| ||||| ||||||| ||| |||||||||
Sbjct: 1043 tttagttgccactgttgagtttggaaccctgagcagactgccggtgataarccggaggaa 1102

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1103 ggtgaggat 1111



to top

>emb|AJ440719.1|OIN440719 Putative agent of rhinosporidiosis partial 16S rRNA gene
          Length = 1458

 Score =  274 bits (138), Expect = 3e-70
 Identities = 180/190 (94%), Gaps = 3/190 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 945  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 1004

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccc-tcgt 120
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 1005 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaacccttcgt 1064

                                                                        
Query: 121  gtttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggagga 179
            |||||||||||| |  ||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 1065 gtttagttgccaccgttgagtttggaaccctgaacagactgccggtgataagccggagga 1124

                      
Query: 180  aggagaggat 189
            ||| ||||||
Sbjct: 1125 aggtgaggat 1134



to top

>gb|AY895148.1| Chloroplast transformation vector pCLT327 Cry1Ab (cry1Ab) and AadA
            (aadA) genes, complete cds; tRNA-Val gene, complete
            sequence; and 16S ribosomal RNA, partial sequence
          Length = 8483

 Score =  272 bits (137), Expect = 1e-69
 Identities = 178/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 8110 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 8169

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 8170 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 8229

                                                                        
Query: 122  tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||| ||  | ||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 8230 tttagttgccaacatttagtttggaaccctgagcagactgccggtgataagccggaggaa 8289

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 8290 ggtgaggat 8298



to top

>gb|AY171318.1| Uncultured bacterium clone s47 16S ribosomal RNA gene, partial
           sequence
          Length = 1039

 Score =  272 bits (137), Expect = 1e-69
 Identities = 178/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 632 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 691

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 692 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 751

                                                                       
Query: 122 tttagttgccactat-gagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||||  | |||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 752 cttagttgccaccgtcgagtttggaaccctgagcagactgccggtgataagccggaggaa 811

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 812 ggtgaggat 820



to top

>gb|AY171306.1| Uncultured bacterium clone s41 16S ribosomal RNA gene, partial
           sequence
          Length = 1050

 Score =  272 bits (137), Expect = 1e-69
 Identities = 178/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 643 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 702

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 703 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 762

                                                                       
Query: 122 tttagttgccactat-gagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||||  | |||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 763 cttagttgccaccgtcgagtttggaaccctgagcagactgccggtgataagccggaggaa 822

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 823 ggtgaggat 831



to top

>gb|AF263516.1|AF263516 Vitis vinifera 16S ribosomal RNA gene, partial sequence;
           chloroplast gene for chloroplast product
          Length = 502

 Score =  272 bits (137), Expect = 1e-69
 Identities = 178/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           ||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 394 cgcgaatccccttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 335

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 334 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 275

                                                                       
Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           ||||||||||| |  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 274 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 215

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 214 ggtgaggat 206



to top

>gb|AY942965.1| Uncultured phototrophic eukaryote clone 39 16S ribosomal RNA gene,
           partial sequence; plastid
          Length = 964

 Score =  272 bits (137), Expect = 1e-69
 Identities = 178/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| ||| || ||||| ||||||||||||||||||||||||||||||
Sbjct: 472 cgcgaatcctcttgaaagagcggagtgccttcgggaacgcggacacaggtggtgcatggc 531

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 532 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 591

                                                                       
Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           |||||||||| ||  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 592 tttagttgccaacgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 651

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 652 ggtgaggat 660



to top

>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome
          Length = 152218

 Score =  272 bits (137), Expect = 1e-69
 Identities = 178/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 134844 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 134785

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 134784 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 134725

                                                                          
Query: 122    tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              |||||||||| ||  | ||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 134724 tttagttgccaacatttagtttggaaccctgagcagactgccggtgataagccggaggaa 134665

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 134664 ggtgaggat 134656



 Score =  272 bits (137), Expect = 1e-69
 Identities = 178/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 100550 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 100609

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 100610 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 100669

                                                                          
Query: 122    tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              |||||||||| ||  | ||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 100670 tttagttgccaacatttagtttggaaccctgagcagactgccggtgataagccggaggaa 100729

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 100730 ggtgaggat 100738



to top

>gb|AY575999.1| Chloroplast transformation vector pCLT312, plastid targeting sequence
          Length = 4508

 Score =  272 bits (137), Expect = 1e-69
 Identities = 178/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 4135 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 4194

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4195 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 4254

                                                                        
Query: 122  tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||| ||  | ||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 4255 tttagttgccaacatttagtttggaaccctgagcagactgccggtgataagccggaggaa 4314

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 4315 ggtgaggat 4323



to top

>gb|U24582.1|CGU24582 Cibotium glaucum chloroplast 16S rRNA gene, partial sequence
          Length = 1425

 Score =  272 bits (137), Expect = 1e-69
 Identities = 172/181 (95%), Gaps = 2/181 (1%)
 Strand = Plus / Plus

                                                                        
Query: 4    gcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggct 62
            ||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 923  gcgaatcctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggct 982

                                                                        
Query: 63   gtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgt 122
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 983  gtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgt 1042

                                                                        
Query: 123  ttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
            ||||||||||||| | ||||||||||||| ||||||| ||||||| ||||||||||||||
Sbjct: 1043 ttagttgccactactaagtttggaaccctaaacagactgccggtgataagccggaggaag 1102

             
Query: 182  g 182
            |
Sbjct: 1103 g 1103



to top

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score =  268 bits (135), Expect = 2e-68
 Identities = 178/190 (93%), Gaps = 3/190 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 138730 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138671

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 138670 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138611

                                                                          
Query: 122    tttagttgcca--ctatgagtttggaaccctgaacagaccgccggtgttaagccggagga 179
              |||||||||||  |  |||| |||||||||||| ||||| ||||||| ||||||||||||
Sbjct: 138610 tttagttgccaaccgttgaggttggaaccctgagcagactgccggtgataagccggagga 138551

                        
Query: 180    aggagaggat 189
              ||| ||||||
Sbjct: 138550 aggtgaggat 138541



 Score =  268 bits (135), Expect = 2e-68
 Identities = 178/190 (93%), Gaps = 3/190 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 103179 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 103238

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 103239 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 103298

                                                                          
Query: 122    tttagttgcca--ctatgagtttggaaccctgaacagaccgccggtgttaagccggagga 179
              |||||||||||  |  |||| |||||||||||| ||||| ||||||| ||||||||||||
Sbjct: 103299 tttagttgccaaccgttgaggttggaaccctgagcagactgccggtgataagccggagga 103358

                        
Query: 180    aggagaggat 189
              ||| ||||||
Sbjct: 103359 aggtgaggat 103368



to top

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score =  268 bits (135), Expect = 2e-68
 Identities = 178/190 (93%), Gaps = 3/190 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 139005 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138946

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 138945 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138886

                                                                          
Query: 122    tttagttgcca--ctatgagtttggaaccctgaacagaccgccggtgttaagccggagga 179
              |||||||||||  |  |||| |||||||||||| ||||| ||||||| ||||||||||||
Sbjct: 138885 tttagttgccaaccgttgaggttggaaccctgagcagactgccggtgataagccggagga 138826

                        
Query: 180    aggagaggat 189
              ||| ||||||
Sbjct: 138825 aggtgaggat 138816



 Score =  268 bits (135), Expect = 2e-68
 Identities = 178/190 (93%), Gaps = 3/190 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 103402 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 103461

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 103462 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 103521

                                                                          
Query: 122    tttagttgcca--ctatgagtttggaaccctgaacagaccgccggtgttaagccggagga 179
              |||||||||||  |  |||| |||||||||||| ||||| ||||||| ||||||||||||
Sbjct: 103522 tttagttgccaaccgttgaggttggaaccctgagcagactgccggtgataagccggagga 103581

                        
Query: 180    aggagaggat 189
              ||| ||||||
Sbjct: 103582 aggtgaggat 103591



to top

>gb|DQ129643.1| Uncultured bacterium clone AKIW940 16S ribosomal RNA gene, partial
            sequence
          Length = 1447

 Score =  266 bits (134), Expect = 7e-68
 Identities = 172/182 (94%), Gaps = 2/182 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 940  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcgggcacaggtggtgcatggc 999

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1000 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1059

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 1060 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1119

              
Query: 181  gg 182
            ||
Sbjct: 1120 gg 1121



to top

>gb|DQ417651.1| Lotus corniculatus 16S ribosomal RNA gene, partial sequence; plastid
          Length = 1409

 Score =  266 bits (134), Expect = 7e-68
 Identities = 179/190 (94%), Gaps = 3/190 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 912  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 971

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtg-ttgggttaagtctcgcaacgagcgcaaccctcgt 120
            ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 972  tgtcgtcagctcgtgccgtaaggtgtttgggttaagtcccgcaacgagcgcaaccctcgt 1031

                                                                        
Query: 121  gtttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggagga 179
            ||||||||||| ||  ||||||||||||||||| ||||| ||||||| ||||||||||||
Sbjct: 1032 gtttagttgccaacgttgagtttggaaccctgagcagactgccggtgataagccggagga 1091

                      
Query: 180  aggagaggat 189
            ||| ||||||
Sbjct: 1092 aggtgaggat 1101



to top

>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome
          Length = 116866

 Score =  266 bits (134), Expect = 7e-68
 Identities = 165/174 (94%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                         
Query: 17    aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
             |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83214 aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 83273

                                                                         
Query: 77    ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcc-acta 135
             |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  
Sbjct: 83274 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccaacat 83333

                                                                   
Query: 136   tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
             ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 83334 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 83387



to top

>gb|AY803199.1| Angiosperm environmental sample clone A20 16S ribosomal RNA gene,
           partial sequence; chloroplast
          Length = 546

 Score =  266 bits (134), Expect = 7e-68
 Identities = 176/188 (93%), Gaps = 4/188 (2%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 38  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 97

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 98  tgtcgtcagctcgcgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 157

                                                                       
Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
           |||||||||||| ||   | ||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 158 tttagttgccaccat---tgtggaaccctgaacagactgccggtgataagccggaggaag 214

                   
Query: 182 gagaggat 189
           | ||||||
Sbjct: 215 gtgaggat 222



to top

>gb|AF244554.1|AF244554 Ginkgo biloba 16S ribosomal RNA gene, partial sequence; chloroplast
            gene for chloroplast product
          Length = 1455

 Score =  266 bits (134), Expect = 7e-68
 Identities = 165/174 (94%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                        
Query: 17   aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
            |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945  aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 1004

                                                                        
Query: 77   ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  
Sbjct: 1005 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccatcat 1064

                                                                  
Query: 136  tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1065 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 1118



to top

>emb|AJ867671.1| Uncultured bacterium partial 16S rRNA gene, clone RS 8-Bact43
          Length = 1489

 Score =  266 bits (134), Expect = 7e-68
 Identities = 165/174 (94%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                        
Query: 17   aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
            |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983  aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 1042

                                                                        
Query: 77   ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  
Sbjct: 1043 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccagcat 1102

                                                                  
Query: 136  tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1103 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 1156



to top

>emb|AJ867651.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS
            8-Bact33
          Length = 1476

 Score =  266 bits (134), Expect = 7e-68
 Identities = 165/174 (94%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                        
Query: 17   aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
            |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970  aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 1029

                                                                        
Query: 77   ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  
Sbjct: 1030 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccagcat 1089

                                                                  
Query: 136  tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1090 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 1143



to top

>emb|AJ867650.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS
            8-Bact24
          Length = 1440

 Score =  266 bits (134), Expect = 7e-68
 Identities = 165/174 (94%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                        
Query: 17   aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
            |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934  aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 993

                                                                        
Query: 77   ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  
Sbjct: 994  ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccagcat 1053

                                                                  
Query: 136  tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1054 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 1107



to top

>emb|AJ867649.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS
            8-Bact22
          Length = 1416

 Score =  266 bits (134), Expect = 7e-68
 Identities = 165/174 (94%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                        
Query: 17   aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
            |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 1109

                                                                        
Query: 77   ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  
Sbjct: 1110 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccagcat 1169

                                                                  
Query: 136  tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1170 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 1223



to top

>gb|U24594.1|OCU24594 Osmunda cinnamomea var. fokiensis chloroplast 16S rRNA gene, partial
            sequence
          Length = 1425

 Score =  266 bits (134), Expect = 7e-68
 Identities = 172/182 (94%), Gaps = 2/182 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttga-agagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||| |||| ||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 922  cgcgaatccttttgagagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 981

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 982  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1041

                                                                        
Query: 122  tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| || ||||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct: 1042 tttagttgccattattgagtttggaaccctaaacagactgccggtgataagccggaggaa 1101

              
Query: 181  gg 182
            ||
Sbjct: 1102 gg 1103



to top

>gb|AF526941.1| Uncultured angiosperm clone T5-20 16S ribosomal RNA gene, partial
           sequence; chloroplast gene for chloroplast product
          Length = 1497

 Score =  264 bits (133), Expect = 3e-67
 Identities = 178/189 (94%), Gaps = 3/189 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 559 cgcgaatcctcttgaaagagaggggtgct-tcgggaacgcggacacaggtggtgcatggc 501

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 500 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 441

                                                                       
Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           ||||||||||| |  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 440 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 381

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 380 ggtgaggat 372



to top

>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence
          Length = 110949

 Score =  264 bits (133), Expect = 3e-67
 Identities = 177/189 (93%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 1495 cgcgaatcctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 1554

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1555 tgtcgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1614

                                                                        
Query: 122  tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||| ||  | ||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 1615 tttagttgccaacgtttagtttggaaccctgaacagactgccggtgataagccggaggaa 1674

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1675 ggtgaggat 1683



to top

>gb|DQ129642.1| Uncultured bacterium clone AKIW415 16S ribosomal RNA gene, partial
            sequence
          Length = 1449

 Score =  264 bits (133), Expect = 3e-67
 Identities = 177/189 (93%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| | |||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 939  cgcgaatcctcttgaaagggaggagtgccttcgggaacgcggacacaggtggtgcatggc 998

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 999  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1058

                                                                        
Query: 122  tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||| ||  ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 1059 tttagttgccaacgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1118

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1119 ggtgaggat 1127



to top

>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 8235

 Score =  264 bits (133), Expect = 3e-67
 Identities = 177/189 (93%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            ||||||| |||||||| |||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 926  cgcgaattctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 985

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 986  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1045

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct: 1046 tttagttgccatcattgagtttggaaccctaaacagactgccggtgataagccggaggaa 1105

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1106 ggtgaggat 1114



to top

>gb|AF372517.1|AF372517 Medicago sativa 16S ribosomal RNA gene, partial sequence; and
           tRNA-Ile and tRNA-Ala genes, complete sequence;
           chloroplast genes for chloroplast products
          Length = 2703

 Score =  264 bits (133), Expect = 3e-67
 Identities = 177/189 (93%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 134 cgcgaatcctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 193

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 194 tgtcgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 253

                                                                       
Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           |||||||||| ||  | ||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 254 tttagttgccaacgtttagtttggaaccctgaacagactgccggtgataagccggaggaa 313

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 314 ggtgaggat 322



to top

>gb|AY855838.1| Maytenus hookeri 16S ribosomal RNA gene, partial sequence;
            chloroplast
          Length = 1452

 Score =  264 bits (133), Expect = 3e-67
 Identities = 177/189 (93%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| ||  |||||||| ||||||||||||||||||||||||||||||
Sbjct: 939  cgcgaatcctcttgaaagaagggggtgccttcgggaacgcggacacaggtggtgcatggc 998

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 999  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1058

                                                                        
Query: 122  tttagttgccac-tatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||||   ||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 1059 tttagttgccacagttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1118

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1119 ggtgaggat 1127



to top

>gb|AF244558.1|AF244558 Megaceros aenigmaticus 16S ribosomal RNA gene, partial sequence;
            chloroplast gene for chloroplast product
          Length = 1487

 Score =  264 bits (133), Expect = 3e-67
 Identities = 177/189 (93%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            ||||||| |||||||| |||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 951  cgcgaattctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 1010

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1011 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1070

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct: 1071 tttagttgccatcactgagtttggaaccctaaacagactgccggtgataagccggaggaa 1130

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1131 ggtgaggat 1139



to top

>gb|AF244551.1|AF244551 Cycas revoluta 16S ribosomal RNA gene, partial sequence; chloroplast
            gene for chloroplast product
          Length = 1469

 Score =  264 bits (133), Expect = 3e-67
 Identities = 178/189 (94%), Gaps = 3/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||| ||||  ||||||||||||||||||||||||||||||
Sbjct: 937  cgcgaatcctcttgaaagagaggagtgct-tcgggaacgcggacacaggtggtgcatggc 995

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 996  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1055

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 1056 tttagttgccatcattgagtttggaaccctgaacagactgccggtgataagccggaggaa 1115

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1116 ggtgaggat 1124



to top

>gb|DQ323045.1| Phaseolus vulgaris clone BAC-71F18, complete sequence
          Length = 157468

 Score =  264 bits (133), Expect = 3e-67
 Identities = 177/189 (93%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 4391 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 4332

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 4331 tgtcgtcagctcgtgccgtaaggtgttgggttaggtcccgcaacgagcgcaaccctcgtg 4272

                                                                        
Query: 122  tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||||  | ||||||||||||||||||||||| || | || |||||||||||||
Sbjct: 4271 tttagttgccaagattgagtttggaaccctgaacagactgctgatgataagccggaggaa 4212

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 4211 ggtgaggat 4203



to top

>dbj|AB087477.1| Anthoceros formosae chloroplast 16S rRNA, complete sequence
          Length = 1614

 Score =  264 bits (133), Expect = 3e-67
 Identities = 177/189 (93%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            ||||||| |||||||| |||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 965  cgcgaattctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 1024

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1025 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1084

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct: 1085 tttagttgccatcattgagtttggaaccctaaacagactgccggtgataagccggaggaa 1144

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1145 ggtgaggat 1153



to top

>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3,
             complete sequence
          Length = 121331

 Score =  264 bits (133), Expect = 3e-67
 Identities = 177/189 (93%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 82506 cgcgaatcctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 82447

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 82446 tgtcgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 82387

                                                                         
Query: 122   tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
             |||||||||| ||  | ||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 82386 tttagttgccaacgtttagtttggaaccctgaacagactgccggtgataagccggaggaa 82327

                      
Query: 181   ggagaggat 189
             || ||||||
Sbjct: 82326 ggtgaggat 82318



to top

>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome
          Length = 161162

 Score =  264 bits (133), Expect = 3e-67
 Identities = 177/189 (93%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              ||||||| |||||||| |||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 154209 cgcgaattctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 154150

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 154149 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 154090

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct: 154089 tttagttgccatcattgagtttggaaccctaaacagactgccggtgataagccggaggaa 154030

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 154029 ggtgaggat 154021



 Score =  264 bits (133), Expect = 3e-67
 Identities = 177/189 (93%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              ||||||| |||||||| |||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 114457 cgcgaattctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 114516

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 114517 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 114576

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  ||||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct: 114577 tttagttgccatcattgagtttggaaccctaaacagactgccggtgataagccggaggaa 114636

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 114637 ggtgaggat 114645



to top

>gb|DQ201846.1| Stevia rebaudiana 16S ribosomal RNA gene, partial sequence; plastid
          Length = 692

 Score =  260 bits (131), Expect = 4e-66
 Identities = 159/167 (95%), Gaps = 1/167 (0%)
 Strand = Plus / Plus

                                                                       
Query: 24  gggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaag 83
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gggtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaag 341

                                                                       
Query: 84  gtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-ctatgagttt 142
           ||||||||||||||| ||||||||||||||||||||||||||||||||| |  |||||||
Sbjct: 342 gtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccatcgttgagttt 401

                                                          
Query: 143 ggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
           |||||||||||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 402 ggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 448



to top

>gb|DQ416274.1| Uncultured bacterium clone s3ub39 16S ribosomal RNA gene, partial
           sequence
          Length = 662

 Score =  258 bits (130), Expect = 2e-65
 Identities = 164/174 (94%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                       
Query: 17  aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
           |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 283

                                                                       
Query: 77  ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135
           |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  
Sbjct: 284 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccagcat 343

                                                                 
Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
           | ||||||||||||||||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 344 ttagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 397



to top

>emb|AJ867655.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS
            8-Bact67
          Length = 1453

 Score =  258 bits (130), Expect = 2e-65
 Identities = 164/174 (94%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                        
Query: 17   aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
            |||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 936  aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcggctcgtg 995

                                                                        
Query: 77   ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  
Sbjct: 996  ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccagcat 1055

                                                                  
Query: 136  tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1056 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 1109



to top

>emb|AJ867652.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS
            8-Bact35
          Length = 1441

 Score =  258 bits (130), Expect = 2e-65
 Identities = 164/174 (94%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                        
Query: 17   aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
            |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935  aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 994

                                                                        
Query: 77   ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  
Sbjct: 995  ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccagcat 1054

                                                                  
Query: 136  tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            ||||||||||||||||||||||| ||||||| || |||||||||||| ||||||
Sbjct: 1055 tgagtttggaaccctgaacagactgccggtgataggccggaggaaggtgaggat 1108



to top

>emb|AJ867648.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS
            8-Bact02
          Length = 1503

 Score =  258 bits (130), Expect = 2e-65
 Identities = 164/174 (94%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                        
Query: 17   aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
            |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985  aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 1044

                                                                        
Query: 77   ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcc-acta 135
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |  
Sbjct: 1045 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccggcat 1104

                                                                  
Query: 136  tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1105 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 1158



to top

>gb|U24580.1|AEU24580 Angiopteris evecta chloroplast 16S rRNA gene, partial sequence
          Length = 1447

 Score =  258 bits (130), Expect = 2e-65
 Identities = 164/174 (94%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                        
Query: 17   aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
            |||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 936  aagagaggagtgccttcgggaacgcggatacaggtggtgcatggctgtcgtcagctcgtg 995

                                                                        
Query: 77   ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta- 135
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || 
Sbjct: 996  ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccattat 1055

                                                                  
Query: 136  tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            ||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1056 tgagtttggaaccctaaacagactgccggtgataagccggaggaaggtgaggat 1109



to top

>gb|AY145653.1| Uncultured eukaryote FL12D05 16S ribosomal RNA gene, partial
           sequence; plastid gene for plastid product
          Length = 695

 Score =  258 bits (130), Expect = 2e-65
 Identities = 164/174 (94%), Gaps = 1/174 (0%)
 Strand = Plus / Minus

                                                                       
Query: 17  aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
           |||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 495 aagagaggagtgccttcgggaacacggacacaggtggtgcatggctgtcgtcagctcgtg 436

                                                                       
Query: 77  ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135
           |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  
Sbjct: 435 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccagcat 376

                                                                 
Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
           ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 375 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 322



to top

>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
          Length = 119707

 Score =  258 bits (130), Expect = 2e-65
 Identities = 164/174 (94%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                         
Query: 17    aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
             |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85303 aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 85362

                                                                         
Query: 77    ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135
             |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  
Sbjct: 85363 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccagcat 85422

                                                                   
Query: 136   tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
             | ||||||||||||||||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 85423 ttagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 85476



to top

>emb|X07675.1|CHGMX Soybean plastid DNA for rps12, rps7, 16S rRNA, tRNA-Val, NADH
           dehydrogenase and ORF 143
          Length = 5680

 Score =  256 bits (129), Expect = 6e-65
 Identities = 177/189 (93%), Gaps = 3/189 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 540 cgcgaatcctcttgaaagagaggggtgct-tcgggaacgcggacacaggtggtgcatggc 482

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 481 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 422

                                                                       
Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           |||||||||| ||  | ||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 421 tttagttgccaacatttagtttggaaccctgagcagactgccggtgataagccggaggaa 362

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 361 ggtgaggat 353



to top

>gb|DQ417653.1| Trifolium repens 16S ribosomal RNA gene, partial sequence; plastid
          Length = 1409

 Score =  256 bits (129), Expect = 6e-65
 Identities = 176/189 (93%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| | |||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 914  cgcgaatcctcttgaaagggaggagtgccttcgggaacgcggacacaggtggtgcatggc 973

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 974  tgtcgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1033

                                                                        
Query: 122  tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||| ||  | ||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 1034 tttagttgccaacgtttagtttggaaccctgaacagactgccggtgataagccggaggaa 1093

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1094 ggtgaggat 1102



to top

>gb|AF244561.1|AF244561 Phaeoceros laevis 16S ribosomal RNA gene, partial sequence;
            chloroplast gene for chloroplast product
          Length = 1487

 Score =  256 bits (129), Expect = 6e-65
 Identities = 176/189 (93%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            ||||||| |||||||| |||||| ||||| |||||| |||||||||||||||||||||||
Sbjct: 951  cgcgaattctcttgaaagagaggagtgccttcgggagcgcggacacaggtggtgcatggc 1010

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1011 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1070

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct: 1071 tttagttgccatcattgagtttggaaccctaaacagactgccggtgataagccggaggaa 1130

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1131 ggtgaggat 1139



to top

>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence
          Length = 124033

 Score =  256 bits (129), Expect = 6e-65
 Identities = 176/189 (93%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||| ||| | ||||||||||||||||||||||||||||||
Sbjct: 26430 cgcgaatcctcttgaaagagaggagtgtcttcgggaacgcggacacaggtggtgcatggc 26371

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 26370 tgtcgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 26311

                                                                         
Query: 122   tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
             |||||||||| ||  | ||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 26310 tttagttgccaacgtttagtttggaaccctgaacagactgccggtgataagccggaggaa 26251

                      
Query: 181   ggagaggat 189
             || ||||||
Sbjct: 26250 ggtgaggat 26242



to top

>gb|AF393613.1| Sphagnum rubellum small subunit ribosomal RNA (rrs) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 1467

 Score =  256 bits (129), Expect = 6e-65
 Identities = 176/189 (93%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||| ||||||| |||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 925  cgcgaatcttcttgaaagagaagagtgccctcgggaacgcggacacaggtggtgcatggc 984

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 985  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1044

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  | ||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct: 1045 tttagttgccatcatttagtttggaaccctaaacagactgccggtgataagccggaggaa 1104

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1105 ggtgaggat 1113



to top

>emb|X06428.1|CHGMV16S Soybean chloroplast DNA for tRNA-Val and 16S rRNA
          Length = 2000

 Score =  256 bits (129), Expect = 6e-65
 Identities = 177/189 (93%), Gaps = 3/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 1461 cgcgaatcctcttgaaagagaggggtgct-tcgggaacgcggacacaggtggtgcatggc 1519

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1520 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1579

                                                                        
Query: 122  tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||| ||  | ||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 1580 tttagttgccaacatttagtttggaaccctgagcagactgccggtgataagccggaggaa 1639

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1640 ggtgaggat 1648



to top

>gb|U24592.1|SPU24592 Sphagnum palustre chloroplast 16S rRNA gene, partial sequence
          Length = 1435

 Score =  256 bits (129), Expect = 6e-65
 Identities = 176/189 (93%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||| ||||||| |||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 921  cgcgaatcttcttgaaagagaagagtgccctcgggaacgcggacacaggtggtgcatggc 980

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 981  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1040

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  | ||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct: 1041 tttagttgccatcatttagtttggaaccctaaacagactgccggtgataagccggaggaa 1100

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1101 ggtgaggat 1109



to top

>emb|AJ007728.1|OMI007728 Orobanche minor chloroplast trnV(GAC) gene, 16S rRNA gene, trnI(GAU)
            pseudogene, trnA(UGC) pseudogene and partial 23S rRNA
            gene
          Length = 2604

 Score =  252 bits (127), Expect = 1e-63
 Identities = 174/188 (92%), Gaps = 5/188 (2%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1299 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 1358

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1359 tgtcgtcagctcgtgccgtcaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1418

                                                                        
Query: 122  tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
            |||||||||||      |||||||||||||||||||| || |||| ||||||||||||||
Sbjct: 1419 tttagttgcca----tcgtttggaaccctgaacagactgctggtgataagccggaggaag 1474

                    
Query: 182  gagaggat 189
            | ||||||
Sbjct: 1475 gtgaggat 1482



to top

>gb|U24589.1|OEU24589 Ophioglossum engelmannii chloroplast 16S rRNA gene, partial sequence
          Length = 1425

 Score =  252 bits (127), Expect = 1e-63
 Identities = 168/179 (93%), Gaps = 2/179 (1%)
 Strand = Plus / Plus

                                                                        
Query: 6    gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64
            ||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 925  gaatcctcttgaaagaggggagtgccctcgggaacgcggacacaggtggtgcatggctgt 984

                                                                        
Query: 65   cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124
            |||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 985  cgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaacccccgtgttt 1044

                                                                       
Query: 125  agttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaagg 182
            |||||||| || | ||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 1045 agttgccattattcagtttggaaccctgaacagactgccggtgataagccggaggaagg 1103



to top

>emb|AJ867654.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS
            8-Bact63
          Length = 1442

 Score =  250 bits (126), Expect = 4e-63
 Identities = 163/174 (93%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                        
Query: 17   aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
            ||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937  aagaggggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 996

                                                                        
Query: 77   ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcc-acta 135
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |  
Sbjct: 997  ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccggcat 1056

                                                                  
Query: 136  tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1057 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 1110



to top

>gb|AF143264.1| Vitis vinifera 16S ribosomal RNA gene, partial sequence;
           chloroplast gene for chloroplast product
          Length = 493

 Score =  248 bits (125), Expect = 2e-62
 Identities = 167/177 (94%), Gaps = 3/177 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 389 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 330

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 329 tgtcgtcagctcgtgccgtaa-gtgttgggttaagtcccgcaacgagcgcaaccctcgtg 271

                                                                    
Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggag 177
           ||||||||||| |  ||||||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 270 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggag 214



to top

>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome
          Length = 122890

 Score =  248 bits (125), Expect = 2e-62
 Identities = 175/189 (92%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||| ||||| || ||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 120795 cgcgaatccttttgaaagaaaggagtgccttcgggaacgcggacacaggtggtgcatggc 120736

                                                                          
Query: 62     tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 120735 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 120676

                                                                          
Query: 122    tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
              ||||||||||| |  | ||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct: 120675 tttagttgccatcatttagtttggaaccctaaacagactgccggtgataagccggaggaa 120616

                       
Query: 181    ggagaggat 189
              || ||||||
Sbjct: 120615 ggtgaggat 120607



 Score =  248 bits (125), Expect = 2e-62
 Identities = 175/189 (92%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||| ||||| || ||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 87307 cgcgaatccttttgaaagaaaggagtgccttcgggaacgcggacacaggtggtgcatggc 87366

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 87367 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 87426

                                                                         
Query: 122   tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
             ||||||||||| |  | ||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct: 87427 tttagttgccatcatttagtttggaaccctaaacagactgccggtgataagccggaggaa 87486

                      
Query: 181   ggagaggat 189
             || ||||||
Sbjct: 87487 ggtgaggat 87495



to top

>emb|Z81323.1|PAA16SRRN P.aquilinum chloroplast 16S rRNA gene
          Length = 1372

 Score =  248 bits (125), Expect = 2e-62
 Identities = 169/181 (93%), Gaps = 2/181 (1%)
 Strand = Plus / Plus

                                                                        
Query: 4    gcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggct 62
            ||||||||| ||||| |||||| ||||| |||||||||| ||||||||||||||||||||
Sbjct: 899  gcgaatccttttgaaagagaggagtgccttcgggaacgcagacacaggtggtgcatggct 958

                                                                        
Query: 63   gtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgt 122
            |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 959  gtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaacccccgtgt 1018

                                                                        
Query: 123  ttagttgccactat-gagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
            ||||||||||||||  ||||||||||||| ||||||| ||||||| ||||||||||||||
Sbjct: 1019 ttagttgccactatcaagtttggaaccctaaacagactgccggtgataagccggaggaag 1078

             
Query: 182  g 182
            |
Sbjct: 1079 g 1079



to top

>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome
          Length = 154373

 Score =  242 bits (122), Expect = 1e-60
 Identities = 162/174 (93%), Gaps = 1/174 (0%)
 Strand = Plus / Minus

                                                                          
Query: 17     aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
              |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150516 aagagaggagtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 150457

                                                                          
Query: 77     ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135
              |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  
Sbjct: 150456 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccatcac 150397

                                                                    
Query: 136    tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
              |  ||||||||| ||||| |||| ||||||| ||||||||||||||| ||||||
Sbjct: 150396 taggtttggaactctgaatagactgccggtgataagccggaggaaggtgaggat 150343



 Score =  242 bits (122), Expect = 1e-60
 Identities = 162/174 (93%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                          
Query: 17     aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
              |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107946 aagagaggagtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 108005

                                                                          
Query: 77     ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135
              |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  
Sbjct: 108006 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccatcac 108065

                                                                    
Query: 136    tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
              |  ||||||||| ||||| |||| ||||||| ||||||||||||||| ||||||
Sbjct: 108066 taggtttggaactctgaatagactgccggtgataagccggaggaaggtgaggat 108119



to top

>gb|AF244563.1|AF244563 Polytrichum commune 16S ribosomal RNA gene, partial sequence;
            chloroplast gene for chloroplast product
          Length = 1486

 Score =  242 bits (122), Expect = 1e-60
 Identities = 162/174 (93%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                        
Query: 17   aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
            |||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965  aagagaagagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 1024

                                                                        
Query: 77   ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  
Sbjct: 1025 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccatcat 1084

                                                                  
Query: 136  tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            | ||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1085 ttagtttggaaccctaaacagactgccggtgataagccggaggaaggtgaggat 1138



to top

>gb|AF244556.1|AF244556 Huperzia lucidula 16S ribosomal RNA gene, partial sequence;
            chloroplast gene for chloroplast product
          Length = 1458

 Score =  242 bits (122), Expect = 1e-60
 Identities = 162/174 (93%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                        
Query: 17   aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939  aagagaggagtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 998

                                                                        
Query: 77   ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  
Sbjct: 999  ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccatcac 1058

                                                                  
Query: 136  tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            |  ||||||||| ||||| |||| ||||||| ||||||||||||||| ||||||
Sbjct: 1059 taggtttggaactctgaatagactgccggtgataagccggaggaaggtgaggat 1112



to top

>gb|AF393607.1| Pellia neesiana small subunit ribosomal RNA (rrs) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 1468

 Score =  242 bits (122), Expect = 1e-60
 Identities = 162/174 (93%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                        
Query: 17   aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
            |||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941  aagagaagagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 1000

                                                                        
Query: 77   ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccactat 136
            |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||  ||
Sbjct: 1001 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcttgtttagttgccatcat 1060

                                                                  
Query: 137  -gagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
             ||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1061 cgagcttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 1114



to top

>gb|AF393588.1| Climacium dendroides small subunit ribosomal RNA (rrs) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 1468

 Score =  242 bits (122), Expect = 1e-60
 Identities = 162/174 (93%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                        
Query: 17   aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
            |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941  aagaaaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 1000

                                                                        
Query: 77   ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  
Sbjct: 1001 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccatcat 1060

                                                                  
Query: 136  tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            | ||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1061 ttagtttggaaccctaaacagactgccggtgataagccggaggaaggtgaggat 1114



to top

>gb|AF152609.1|AF152609 Pellia neesiana 16S ribosomal RNA gene, partial sequence;
           chloroplast gene for chloroplast product
          Length = 691

 Score =  242 bits (122), Expect = 1e-60
 Identities = 162/174 (93%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                       
Query: 17  aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
           |||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 aagagaagagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 272

                                                                       
Query: 77  ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccactat 136
           |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||  ||
Sbjct: 273 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcttgtttagttgccatcat 332

                                                                 
Query: 137 -gagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            ||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 333 cgagcttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 386



to top

>gb|U24593.1|EAU24593 Equisetum arvense chloroplast 16S rRNA gene, partial sequence
          Length = 1443

 Score =  242 bits (122), Expect = 1e-60
 Identities = 150/158 (94%), Gaps = 1/158 (0%)
 Strand = Plus / Plus

                                                                        
Query: 33   cgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggt 92
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949  cgggagcgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggt 1008

                                                                        
Query: 93   taagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttggaaccctg 151
            |||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| 
Sbjct: 1009 taagtcccgcaacgagcgcaaccctcgtgtttagttgccattattgagtttggaacccta 1068

                                                  
Query: 152  aacagaccgccggtgttaagccggaggaaggagaggat 189
            ||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1069 aacagactgccggtgataagccggaggaaggtgaggat 1106



to top

>gb|DQ417652.1| Glechoma hederacea 16S ribosomal RNA gene, partial sequence; plastid
          Length = 1403

 Score =  240 bits (121), Expect = 4e-60
 Identities = 174/189 (92%), Gaps = 7/189 (3%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 912  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 971

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| |||||||||     ||||||||
Sbjct: 972  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgag-----ccctcgtg 1026

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  ||| ||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 1027 tttagttgccatcgttgaatttggaaccctgaacagactgccggtgataagccggaggaa 1086

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1087 ggtgaggat 1095



to top

>gb|AF058678.1|AF058678 Takakia lepidozioides small subunit ribosomal RNA gene, chloroplast
            gene for chloroplast RNA, partial sequence
          Length = 1430

 Score =  236 bits (119), Expect = 6e-59
 Identities = 150/159 (94%), Gaps = 1/159 (0%)
 Strand = Plus / Plus

                                                                        
Query: 32   tcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttggg 91
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950  tcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttggg 1009

                                                                        
Query: 92   ttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-ctatgagtttggaaccct 150
            ||||||| ||||||||||||||||||||||||||||||||| |  | |||||||||||||
Sbjct: 1010 ttaagtcccgcaacgagcgcaaccctcgtgtttagttgccatcatttagtttggaaccct 1069

                                                   
Query: 151  gaacagaccgccggtgttaagccggaggaaggagaggat 189
             ||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1070 aaacagactgccggtgataagccggaggaaggtgaggat 1108



to top

>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome
          Length = 138829

 Score =  236 bits (119), Expect = 6e-59
 Identities = 150/159 (94%), Gaps = 1/159 (0%)
 Strand = Plus / Minus

                                                                          
Query: 32     tcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttggg 91
              |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 131213 tcgggaacgcagacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttagg 131154

                                                                          
Query: 92     ttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttggaaccct 150
              ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 131153 ttaagtcccgcaacgagcgcaaccctcgtgtttagttgccattactgagtttggaaccct 131094

                                                     
Query: 151    gaacagaccgccggtgttaagccggaggaaggagaggat 189
               ||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 131093 aaacagactgccggtgataagccggaggaaggtgaggat 131055



 Score =  236 bits (119), Expect = 6e-59
 Identities = 150/159 (94%), Gaps = 1/159 (0%)
 Strand = Plus / Plus

                                                                         
Query: 32    tcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttggg 91
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 92234 tcgggaacgcagacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttagg 92293

                                                                         
Query: 92    ttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttggaaccct 150
             ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 92294 ttaagtcccgcaacgagcgcaaccctcgtgtttagttgccattactgagtttggaaccct 92353

                                                    
Query: 151   gaacagaccgccggtgttaagccggaggaaggagaggat 189
              ||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 92354 aaacagactgccggtgataagccggaggaaggtgaggat 92392



to top

>gb|U24590.1|PNU24590 Psilotum nudum chloroplast 16S rRNA gene, partial sequence
          Length = 1452

 Score =  236 bits (119), Expect = 6e-59
 Identities = 150/159 (94%), Gaps = 1/159 (0%)
 Strand = Plus / Plus

                                                                        
Query: 32   tcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttggg 91
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 956  tcgggaacgcagacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttagg 1015

                                                                        
Query: 92   ttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttggaaccct 150
            ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 1016 ttaagtcccgcaacgagcgcaaccctcgtgtttagttgccattactgagtttggaaccct 1075

                                                   
Query: 151  gaacagaccgccggtgttaagccggaggaaggagaggat 189
             ||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1076 aaacagactgccggtgataagccggaggaaggtgaggat 1114



to top

>gb|U24581.1|BBU24581 Botrychium biternatum chloroplast 16S rRNA gene, partial sequence
          Length = 1425

 Score =  236 bits (119), Expect = 6e-59
 Identities = 166/179 (92%), Gaps = 2/179 (1%)
 Strand = Plus / Plus

                                                                        
Query: 6    gaatcctcttga-agagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64
            |||||||||||| |||| || ||||| |||||||||||||||||||||||||||||||||
Sbjct: 925  gaatcctcttgagagaggggagtgccttcgggaacgcggacacaggtggtgcatggctgt 984

                                                                        
Query: 65   cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124
            |||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 985  cgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaacccccgtgttt 1044

                                                                       
Query: 125  agttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaagg 182
            |||||||| || | ||||||||||||| ||||||| ||||||| |||||||||||||||
Sbjct: 1045 agttgccattattcagtttggaaccctaaacagactgccggtgataagccggaggaagg 1103



to top

>emb|AJ401354.1|CEU401354 Cuscuta europaea chloroplast 16S rRNA gene
          Length = 1894

 Score =  236 bits (119), Expect = 6e-59
 Identities = 172/187 (91%), Gaps = 2/187 (1%)
 Strand = Plus / Plus

                                                                        
Query: 5    cgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctg 63
            |||||||||||||| |||||||||||| | ||||||| || |||||||||||||||||||
Sbjct: 1146 cgaatcctcttgaaagagaggggtgccttagggaacgtgggcacaggtggtgcatggctg 1205

                                                                        
Query: 64   tcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtt 123
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1206 tcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtt 1265

                                                                        
Query: 124  tagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaagg 182
            ||||||||| |  |  |||||||||||| ||||||| ||||||| |||||||||||||||
Sbjct: 1266 tagttgccatcattttgtttggaaccctaaacagactgccggtgataagccggaggaagg 1325

                   
Query: 183  agaggat 189
             ||||||
Sbjct: 1326 tgaggat 1332



to top

>gb|U24587.1|LDU24587 Lycopodium digitatum chloroplast 16S rRNA gene, partial sequence
          Length = 1456

 Score =  234 bits (118), Expect = 2e-58
 Identities = 171/186 (91%), Gaps = 2/186 (1%)
 Strand = Plus / Plus

                                                                        
Query: 6    gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64
            ||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 944  gaatcctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgt 1003

                                                                        
Query: 65   cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| 
Sbjct: 1004 cgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgttc 1063

                                                                        
Query: 125  agttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183
            |||||||| |  |  ||||||||| ||||| |||| ||||||| ||||||||||||||| 
Sbjct: 1064 agttgccatcactaggtttggaactctgaatagactgccggtgataagccggaggaaggt 1123

                  
Query: 184  gaggat 189
            ||||||
Sbjct: 1124 gaggat 1129



to top

>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
          Length = 121024

 Score =  232 bits (117), Expect = 9e-58
 Identities = 154/165 (93%), Gaps = 1/165 (0%)
 Strand = Plus / Minus

                                                                          
Query: 26     gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119033 gtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 118974

                                                                          
Query: 86     gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-ctatgagtttgg 144
              ||||||||||||| ||||||||||||||||||| ||||||||||||| |  | |||||||
Sbjct: 118973 gttgggttaagtcccgcaacgagcgcaaccctcttgtttagttgccatcattaagtttgg 118914

                                                           
Query: 145    aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
              |||||| ||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 118913 aaccctaaacagactgccggtgataagccggaggaaggtgaggat 118869



 Score =  232 bits (117), Expect = 9e-58
 Identities = 154/165 (93%), Gaps = 1/165 (0%)
 Strand = Plus / Plus

                                                                         
Query: 26    gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83087 gtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 83146

                                                                         
Query: 86    gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-ctatgagtttgg 144
             ||||||||||||| ||||||||||||||||||| ||||||||||||| |  | |||||||
Sbjct: 83147 gttgggttaagtcccgcaacgagcgcaaccctcttgtttagttgccatcattaagtttgg 83206

                                                          
Query: 145   aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
             |||||| ||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 83207 aaccctaaacagactgccggtgataagccggaggaaggtgaggat 83251



to top

>gb|U47845.1|CRU47845 Cytinus ruber 16S ribosomal RNA gene, chloroplast gene for
            chloroplast RNA, partial sequence
          Length = 1418

 Score =  232 bits (117), Expect = 9e-58
 Identities = 173/189 (91%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            ||||||| |||||||| |||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 914  cgcgaatactcttgaaagagaggagtgccctagggaacgcggacacaggtggtgcatggc 973

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||
Sbjct: 974  tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccataacgagcgcaaccctcgtg 1033

                                                                        
Query: 122  tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| || | |||||||||| || |||| || |||||||||||| ||||||||
Sbjct: 1034 tttagttgccaatacttagtttggaactctaaacatactgccggtgttaagtcggaggaa 1093

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1094 ggtgaggat 1102



to top

>emb|AJ278625.1|CSU278625 Cuscuta subinclusa chloroplast tRNA-Val(GAC) gene and 16S rRNA gene
          Length = 2452

 Score =  232 bits (117), Expect = 9e-58
 Identities = 174/189 (92%), Gaps = 3/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| | |||||||||  ||||||||||||||||||||||||||||||
Sbjct: 1650 cgcgaatcctcttgaaagggaggggtgct-tcgggaacgcggacacaggtggtgcatggc 1708

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||
Sbjct: 1709 tgtcgtcagctcgtgccgtaaggtgttgggttcagtcccgcaacgagcgcaaccctcttg 1768

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  |  |||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 1769 tttagttgccatcgtttcgtttggaaccctgaacagactgccggtgataagccggaggaa 1828

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1829 ggtgaggat 1837



to top

>emb|AJ278624.1|COD278624 Cuscuta odorata chloroplast tRNA-Val(GAC) gene and 16S rRNA gene
          Length = 2231

 Score =  232 bits (117), Expect = 9e-58
 Identities = 174/189 (92%), Gaps = 3/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| | |||||||||  ||||||||||||||||||||||||||||||
Sbjct: 1525 cgcgaatcctcttgaaagggaggggtgct-tcgggaacgcggacacaggtggtgcatggc 1583

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||
Sbjct: 1584 tgtcgtcagctcgtgccgtaaggtgttgggttcagtcccgcaacgagcgcaaccctcttg 1643

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  |  |||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 1644 tttagttgccatcgtttcgtttggaaccctgaacagactgccggtgataagccggaggaa 1703

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1704 ggtgaggat 1712



to top

>emb|AJ278623.1|CGR278623 Cuscuta gronovii chloroplast tRNA-Val(GAC) gene and 16S rRNA gene
          Length = 2291

 Score =  232 bits (117), Expect = 9e-58
 Identities = 174/189 (92%), Gaps = 3/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| | |||||||||  ||||||||||||||||||||||||||||||
Sbjct: 1573 cgcgaatcctcttgaaagggaggggtgct-tcgggaacgcggacacaggtggtgcatggc 1631

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 1632 tgtcgtcagctcgtgccgtaaggtgttgggttcagtcccgcaacgagcgcaaccctcgtg 1691

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            || |||||||| |  |  |||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 1692 ttaagttgccatcgtttcgtttggaaccctgaacagactgccggtgataagccggaggaa 1751

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1752 ggtgaggat 1760



to top

>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon
          Length = 7920

 Score =  232 bits (117), Expect = 9e-58
 Identities = 174/189 (92%), Gaps = 3/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||| ||||| ||||||| ||| ||||||||||||||||||
Sbjct: 1689 cgcgaatcctcttgaaagagaggagtgccttcgggaatgcg-acacaggtggtgcatggc 1747

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1748 tgtcgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1807

                                                                        
Query: 122  tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||| ||  | |||||||||| |||||||||| ||||||| |||||||||||||
Sbjct: 1808 tttagttgccaacgtttagtttggaactctgaacagactgccggtgataagccggaggaa 1867

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1868 ggtgaggat 1876



to top

>emb|X51598.1|PS16SVAL P.sativum 16S rRNA & tRNA-Val chloroplast genes
          Length = 2315

 Score =  232 bits (117), Expect = 9e-58
 Identities = 174/189 (92%), Gaps = 3/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||| ||||| ||||||| ||| ||||||||||||||||||
Sbjct: 1422 cgcgaatcctcttgaaagagaggagtgccttcgggaatgcg-acacaggtggtgcatggc 1480

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1481 tgtcgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1540

                                                                        
Query: 122  tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||| ||  | |||||||||| |||||||||| ||||||| |||||||||||||
Sbjct: 1541 tttagttgccaacgtttagtttggaactctgaacagactgccggtgataagccggaggaa 1600

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1601 ggtgaggat 1609



to top

>emb|AJ401353.1|CCA401353 Cuscuta campestris chloroplast 16S rRNA gene
          Length = 1990

 Score =  232 bits (117), Expect = 9e-58
 Identities = 174/189 (92%), Gaps = 3/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| | |||||||||  ||||||||||||||||||||||||||||||
Sbjct: 1196 cgcgaatcctcttgaaagggaggggtgct-tcgggaacgcggacacaggtggtgcatggc 1254

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 1255 tgtcgtcagctcgtgccgtaaggtgttgggttcagtcccgcaacgagcgcaaccctcgtg 1314

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  |  |||||||||||||||||||| || |||| |||||||||||||
Sbjct: 1315 tttagttgccatcgtttcgtttggaaccctgaacagactgcgggtgataagccggaggaa 1374

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1375 ggtgaggat 1383



to top

>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA
          Length = 7920

 Score =  232 bits (117), Expect = 9e-58
 Identities = 174/189 (92%), Gaps = 3/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||| ||||| ||||||| ||| ||||||||||||||||||
Sbjct: 1689 cgcgaatcctcttgaaagagaggagtgccttcgggaatgcg-acacaggtggtgcatggc 1747

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1748 tgtcgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1807

                                                                        
Query: 122  tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            |||||||||| ||  | |||||||||| |||||||||| ||||||| |||||||||||||
Sbjct: 1808 tttagttgccaacgtttagtttggaactctgaacagactgccggtgataagccggaggaa 1867

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1868 ggtgaggat 1876



to top

>emb|X58864.1|CARRN16S C.americana plastid 16S rRNA gene and spacer region
          Length = 1978

 Score =  228 bits (115), Expect = 1e-56
 Identities = 170/185 (91%), Gaps = 5/185 (2%)
 Strand = Plus / Plus

                                                                        
Query: 6    gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64
            ||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 1046 gaatcctcttgaaagagaggggtgccttcgggaacgtggacacaggtggtgcatggctgt 1105

                                                                        
Query: 65   cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124
            |||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||
Sbjct: 1106 cgtcagctcgtgccgtaaggtgttgggttaagtcccctaacgagcgcaaccctcgtgttt 1165

                                                                        
Query: 125  agttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggag 184
            ||||||| ||||   ||||||||||||| ||||| ||||||| |||||| |||||||| |
Sbjct: 1166 agttgcc-ctat---tttggaaccctgagcagactgccggtgataagccagaggaaggtg 1221

                 
Query: 185  aggat 189
            |||||
Sbjct: 1222 aggat 1226



to top

>gb|AF244549.1|AF244549 Adiantum pedatum 16S ribosomal RNA gene, partial sequence;
            chloroplast gene for chloroplast product
          Length = 1484

 Score =  228 bits (115), Expect = 1e-56
 Identities = 155/167 (92%), Gaps = 1/167 (0%)
 Strand = Plus / Plus

                                                                        
Query: 17   aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
            |||||||| | ||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 963  aagagaggagcgccttcgggaacgcagacacaggtggtgcatggctgtcgtcagctcgtg 1022

                                                                        
Query: 77   ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccactat 136
            |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1023 ccgtgaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccactat 1082

                                                           
Query: 137  -gagtttggaaccctgaacagaccgccggtgttaagccggaggaagg 182
              ||||||||||||| ||||||| |||||||  ||||||||||||||
Sbjct: 1083 caagtttggaaccctaaacagactgccggtgacaagccggaggaagg 1129



to top

>gb|U24595.1|TOU24595 Tmesipteris oblanceolata chloroplast 16S rRNA gene, partial sequence
          Length = 1436

 Score =  226 bits (114), Expect = 6e-56
 Identities = 148/158 (93%), Gaps = 1/158 (0%)
 Strand = Plus / Plus

                                                                        
Query: 33   cgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggt 92
            ||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 964  cgggaacacagacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttaggt 1023

                                                                        
Query: 93   taagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttggaaccctg 151
            |||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| 
Sbjct: 1024 taagtcccgcaacgagcgcaaccctcgtgtttagttgccattactgagtttggaacccta 1083

                                                  
Query: 152  aacagaccgccggtgttaagccggaggaaggagaggat 189
            ||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1084 aacagactgccggtgataagccggaggaaggtgaggat 1121



to top

>gb|AF244550.1|AF244550 Calypogeia muelleriana 16S ribosomal RNA gene, partial sequence;
            chloroplast gene for chloroplast product
          Length = 1481

 Score =  224 bits (113), Expect = 2e-55
 Identities = 153/165 (92%), Gaps = 1/165 (0%)
 Strand = Plus / Plus

                                                                        
Query: 26   gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85
            ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 969  gtgccttcgggaacgcggacacaggtggtgcatggctgtcgccagctcgtgccgtaaggt 1028

                                                                        
Query: 86   gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttgg 144
            ||||||||||||| ||||||||||||||||||| |||||||||||||  | |||||| ||
Sbjct: 1029 gttgggttaagtcccgcaacgagcgcaaccctcttgtttagttgccataactgagttcgg 1088

                                                         
Query: 145  aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            |||||| ||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1089 aaccctaaacagactgccggtgataagccggaggaaggtgaggat 1133



to top

>gb|U24586.1|JVU24586 Juniperus virginiana chloroplast 16S rRNA gene, partial sequence
          Length = 1454

 Score =  224 bits (113), Expect = 2e-55
 Identities = 171/188 (90%), Gaps = 3/188 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaaga-gaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||| ||||| | |||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 942  cgcgaatccttttgaaaaagaggagtgccttcgggaacgcggacacaggtggtgcatggc 1001

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1002 tgtcgtcagttcgtgccgcaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1061

                                                                        
Query: 122  tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
            |||||||||||  |  |||||||||| ||||||||||   ||||||||||||||||||||
Sbjct: 1062 tttagttgccataa--agtttggaactctgaacagactatcggtgttaagccggaggaag 1119

                    
Query: 182  gagaggat 189
            | ||||||
Sbjct: 1120 gtgaggat 1127



to top

>emb|AJ401355.1|CPL401355 Cuscuta platyloba chloroplast 16S rRNA gene
          Length = 1998

 Score =  224 bits (113), Expect = 2e-55
 Identities = 173/189 (91%), Gaps = 3/189 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| | |||||||||  ||||||||||||||||||||||||||||||
Sbjct: 1198 cgcgaatcctcttgaaagggaggggtgct-tcgggaacgcggacacaggtggtgcatggc 1256

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||
Sbjct: 1257 tgtcgtcagctcgtgccgtaaggtgttgggttcagtcccgcaacgagcgcaaccctcttg 1316

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  |  |||||||||||||||||||| ||||||| ||||| |||||||
Sbjct: 1317 tttagttgccatcgtttcgtttggaaccctgaacagactgccggtgataagcgggaggaa 1376

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1377 ggtgaggat 1385



to top

>gb|AF141146.1|AF141146 Vigna unguiculata clone TV72NBS3 16S ribosomal RNA gene, partial
           sequence; chloroplast gene for chloroplast product
          Length = 378

 Score =  220 bits (111), Expect = 4e-54
 Identities = 139/147 (94%), Gaps = 1/147 (0%)
 Strand = Plus / Plus

                                                                       
Query: 44  acacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgca 103
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 15  acacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgca 74

                                                                       
Query: 104 acgagcgcaaccctcgtgtttagttgccacta-tgagtttggaaccctgaacagaccgcc 162
           |||||||||||||||||||||||||||||  | ||||||||||||||||| ||||| |||
Sbjct: 75  acgagcgcaaccctcgtgtttagttgccaagattgagtttggaaccctgagcagactgcc 134

                                      
Query: 163 ggtgttaagccggaggaaggagaggat 189
           |||| ||||||||||||||| ||||||
Sbjct: 135 ggtgataagccggaggaaggtgaggat 161



to top

>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome
          Length = 70028

 Score =  218 bits (110), Expect = 1e-53
 Identities = 126/130 (96%), Gaps = 1/130 (0%)
 Strand = Plus / Minus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 55239 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 55180

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 55179 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgtaacgagcgcaaccctcgtg 55120

                       
Query: 122   tttagttgcc 131
             ||||||||||
Sbjct: 55119 tttagttgcc 55110



 Score =  218 bits (110), Expect = 1e-53
 Identities = 126/130 (96%), Gaps = 1/130 (0%)
 Strand = Plus / Plus

                                                                         
Query: 3     cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
             |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 34589 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 34648

                                                                         
Query: 62    tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
             ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 34649 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgtaacgagcgcaaccctcgtg 34708

                       
Query: 122   tttagttgcc 131
             ||||||||||
Sbjct: 34709 tttagttgcc 34718



to top

>gb|AF393578.1| Bazzania trilobata small subunit ribosomal RNA (rrs) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 1464

 Score =  218 bits (110), Expect = 1e-53
 Identities = 147/158 (93%), Gaps = 1/158 (0%)
 Strand = Plus / Plus

                                                                        
Query: 33   cgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggt 92
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953  cgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggt 1012

                                                                        
Query: 93   taagtctcgcaacgagcgcaaccctcgtgtttagttgcca-ctatgagtttggaaccctg 151
            |||||| ||||||||||||||||||| ||||||||||||| |  |||||  |||||||| 
Sbjct: 1013 taagtcccgcaacgagcgcaaccctcttgtttagttgccatcactgagtccggaacccta 1072

                                                  
Query: 152  aacagaccgccggtgttaagccggaggaaggagaggat 189
            ||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1073 aacagactgccggtgataagccggaggaaggtgaggat 1110



to top

>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1057_D08
          Length = 119557

 Score =  218 bits (110), Expect = 1e-53
 Identities = 134/142 (94%)
 Strand = Plus / Plus

                                                                          
Query: 48     aggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacga 107
              ||||||||||||| |||||||||||||||  |||||||||||| |||||||||||||| |
Sbjct: 114159 aggtggtgcatggttgtcgtcagctcgtgttgtaaggtgttggtttaagtctcgcaacaa 114218

                                                                          
Query: 108    gcgcaaccctcgtgtttagttgccactatgagtttggaaccctgaacagaccgccggtgt 167
              ||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 114219 gcgcaacactcatgtttagttgccattatgagtttggaaccctgaacagaccgccggtgt 114278

                                    
Query: 168    taagccggaggaaggagaggat 189
              ||||||||||||||||||||||
Sbjct: 114279 taagccggaggaaggagaggat 114300



to top

>gb|AF141142.1|AF141142 Vigna unguiculata clone VU124NBS2 16S ribosomal RNA gene, partial
           sequence; chloroplast gene for chloroplast product
          Length = 586

 Score =  218 bits (110), Expect = 1e-53
 Identities = 138/146 (94%), Gaps = 1/146 (0%)
 Strand = Plus / Plus

                                                                       
Query: 44  acacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgca 103
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 439 acacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgca 498

                                                                       
Query: 104 acgagcgcaaccctcgtgtttagttgccactatgagtttggaaccctgaacagaccgccg 163
           |||||||||||||||||||||||||||||  |||||||||||||||||| ||||| ||||
Sbjct: 499 acgagcgcaaccctcgtgtttagttgccaagatgagtttggaaccctgagcagactgccg 558

                                     
Query: 164 gtgttaagccggaggaaggagaggat 189
           ||| |||||| |||||||| ||||||
Sbjct: 559 gtgataagcc-gaggaaggtgaggat 583



to top

>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes
          Length = 7395

 Score =  218 bits (110), Expect = 1e-53
 Identities = 126/130 (96%), Gaps = 1/130 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1517 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 1576

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 1577 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgtaacgagcgcaaccctcgtg 1636

                      
Query: 122  tttagttgcc 131
            ||||||||||
Sbjct: 1637 tttagttgcc 1646



to top

>gb|AF445656.1| Uncultured eukaryote clone SM1B08 16S ribosomal RNA gene, partial
            sequence; plastid gene for plastid product
          Length = 1475

 Score =  216 bits (109), Expect = 6e-53
 Identities = 170/188 (90%), Gaps = 3/188 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaaga-gaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||| ||||| | |||| ||||| |||||||| |||||||||||||||||||||
Sbjct: 969  cgcgaatccttttgaaaaagaggagtgccttcgggaacacggacacaggtggtgcatggc 1028

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1029 tgtcgtcagttcgtgccgcaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1088

                                                                        
Query: 122  tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
            |||||||||||  |  |||||||||| ||||||||||   ||||||||||||||||||||
Sbjct: 1089 tttagttgccataa--agtttggaactctgaacagactatcggtgttaagccggaggaag 1146

                    
Query: 182  gagaggat 189
            | ||||||
Sbjct: 1147 gtgaggat 1154



to top

>gb|U24583.1|DMU24583 Doodia maxima chloroplast 16S rRNA gene, partial sequence
          Length = 1425

 Score =  216 bits (109), Expect = 6e-53
 Identities = 165/181 (91%), Gaps = 2/181 (1%)
 Strand = Plus / Plus

                                                                        
Query: 4    gcgaatcctcttgaaga-gaggggtgccctcgggaacgcggacacaggtggtgcatggct 62
            ||||||||||||||| | |||| | ||| | |||||||| ||||||||||||||||||||
Sbjct: 923  gcgaatcctcttgaaaaagaggagcgcctttgggaacgcagacacaggtggtgcatggct 982

                                                                        
Query: 63   gtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgt 122
            |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 983  gtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaacccccgtgt 1042

                                                                        
Query: 123  ttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
            |||||||||||||   ||||||||||||| ||||||| ||||||| ||||| ||||||||
Sbjct: 1043 ttagttgccactaccaagtttggaaccctaaacagactgccggtgataagctggaggaag 1102

             
Query: 182  g 182
            |
Sbjct: 1103 g 1103



to top

>gb|DQ494144.1| Uncultured cyanobacterium 16S ribosomal RNA gene, partial sequence
          Length = 414

 Score =  212 bits (107), Expect = 9e-52
 Identities = 156/172 (90%), Gaps = 2/172 (1%)
 Strand = Plus / Plus

                                                                       
Query: 20  agaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccg 79
           ||||||||||| |||||||| | |||||||||||||||||||||||||||||||||| ||
Sbjct: 28  agaggggtgccttcgggaacncngacacaggtggtgcatggctgtcgtcagctcgtgncg 87

                                                                       
Query: 80  taagg-tgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-ctatg 137
           | ||| |||||||||||||| |||||||||||||||||| |||||||||||||| |  ||
Sbjct: 88  tnaggatgttgggttaagtcccgcaacgagcgcaaccctngtgtttagttgccaccgttg 147

                                                               
Query: 138 agtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
           |||||||||||||||| |||| ||||||| ||| ||||||||||| ||||||
Sbjct: 148 agtttggaaccctgaanagactgccggtgataanccggaggaaggtgaggat 199



to top

>gb|AF141149.1|AF141149 Vigna unguiculata clone TV72NBS4 16S ribosomal RNA gene, partial
           sequence
          Length = 397

 Score =  212 bits (107), Expect = 9e-52
 Identities = 138/147 (93%), Gaps = 1/147 (0%)
 Strand = Plus / Plus

                                                                       
Query: 44  acacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgca 103
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 32  acacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgca 91

                                                                       
Query: 104 acgagcgcaaccctcgtgtttagttgcc-actatgagtttggaaccctgaacagaccgcc 162
           |||||||||||||||||||||||||||| ||  | ||||||||||||||| ||||| |||
Sbjct: 92  acgagcgcaaccctcgtgtttagttgccaacatttagtttggaaccctgagcagactgcc 151

                                      
Query: 163 ggtgttaagccggaggaaggagaggat 189
           |||| ||||||||||||||| ||||||
Sbjct: 152 ggtgataagccggaggaaggtgaggat 178



to top

>gb|U24588.1|LJU24588 Lygodium japonicum chloroplast 16S rRNA gene, partial sequence
          Length = 1437

 Score =  210 bits (106), Expect = 3e-51
 Identities = 146/158 (92%), Gaps = 1/158 (0%)
 Strand = Plus / Plus

                                                                        
Query: 26   gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85
            ||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 946  gtgccttcgggaacgtggatacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 1005

                                                                        
Query: 86   gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttgg 144
            ||||||||||||| ||||||||||||||||||||||||||||||||| || | |  ||||
Sbjct: 1006 gttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccattactcaaattgg 1065

                                                  
Query: 145  aaccctgaacagaccgccggtgttaagccggaggaagg 182
            |||||| ||||||| ||||||| |||||||||||||||
Sbjct: 1066 aaccctaaacagactgccggtgataagccggaggaagg 1103



to top

>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome
          Length = 150568

 Score =  208 bits (105), Expect = 1e-50
 Identities = 164/181 (90%), Gaps = 2/181 (1%)
 Strand = Plus / Plus

                                                                          
Query: 4      gcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggct 62
              ||||||||||||||| ||| || | ||| |||||||||| ||||||||||||||||||||
Sbjct: 140904 gcgaatcctcttgaaagaggggagcgccttcgggaacgcagacacaggtggtgcatggct 140963

                                                                          
Query: 63     gtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgt 122
              |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 140964 gtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaacccccgtgt 141023

                                                                          
Query: 123    ttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
              |||||||||| ||   |||||||||||||  |||||| |||||||  |||||||||||||
Sbjct: 141024 ttagttgccattaccaagtttggaaccctagacagactgccggtgacaagccggaggaag 141083

               
Query: 182    g 182
              |
Sbjct: 141084 g 141084



 Score =  208 bits (105), Expect = 1e-50
 Identities = 164/181 (90%), Gaps = 2/181 (1%)
 Strand = Plus / Minus

                                                                         
Query: 4     gcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggct 62
             ||||||||||||||| ||| || | ||| |||||||||| ||||||||||||||||||||
Sbjct: 91947 gcgaatcctcttgaaagaggggagcgccttcgggaacgcagacacaggtggtgcatggct 91888

                                                                         
Query: 63    gtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgt 122
             |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 91887 gtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaacccccgtgt 91828

                                                                         
Query: 123   ttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181
             |||||||||| ||   |||||||||||||  |||||| |||||||  |||||||||||||
Sbjct: 91827 ttagttgccattaccaagtttggaaccctagacagactgccggtgacaagccggaggaag 91768

              
Query: 182   g 182
             |
Sbjct: 91767 g 91767



to top

>gb|AY100594.1| Uncultured bacterium clone cvf116009 16S ribosomal RNA gene,
           partial sequence
          Length = 680

 Score =  202 bits (102), Expect = 8e-49
 Identities = 157/174 (90%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                       
Query: 17  aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
           |||||||| ||||| ||||||| || ||||||||||||||||||||||||||||||| ||
Sbjct: 225 aagagaggagtgccttcgggaatgcagacacaggtggtgcatggctgtcgtcagctcatg 284

                                                                       
Query: 77  ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcc-acta 135
           ||||||||||||||||  |||| | ||||||||||||||||| |||||||||||| ||  
Sbjct: 285 ccgtaaggtgttgggtagagtcccacaacgagcgcaaccctcatgtttagttgccaacat 344

                                                                 
Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
           | ||||||||||||||||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 345 ttagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 398



to top

>gb|AY054380.1| Hordeum patagonicum clone HpaLTR-INS Sukkula retrotransposon long
            terminal repeat, complete sequence
          Length = 7731

 Score =  202 bits (102), Expect = 8e-49
 Identities = 219/249 (87%), Gaps = 8/249 (3%)
 Strand = Plus / Plus

                                                                        
Query: 210  gtctacttcacggattcgttcttcttccatgctggatc-caggcaatatgatc-atttcc 267
            |||| |||||||||||||||||||||||| || ||||| ||||||| |||| | ||||||
Sbjct: 2746 gtcttcttcacggattcgttcttcttccaagcgggatctcaggcaagatgacccatttcc 2805

                                                                        
Query: 268  ctatataccagtactatcattgctatgctagttgtgtcagttctatcgctatgtctcgct 327
            ||  |||||| |||||||||||| ||||||||||| ||  ||||||||||  ||||||||
Sbjct: 2806 ctggataccattactatcattgccatgctagttgtctcgtttctatcgct--gtctcgct 2863

                                                                        
Query: 328  atctaccacctgttatgtcaagcctccctacatttccatgaaaagcctctaacccctcca 387
            | ||||||| ||| |||||||||||||| | ||| |||||||||||||||||||||||||
Sbjct: 2864 acctaccac-tgt-atgtcaagcctcccaa-attgccatgaaaagcctctaacccctcca 2920

                                                                        
Query: 388  catccgagcaaacctttgtttggctatgttactgcttgcttggcccttcttatagcgttt 447
             |||| ||||||| || |||||||||||||||||||||||  ||||||||||||||||| 
Sbjct: 2921 gatcccagcaaacatt-gtttggctatgttactgcttgctcagcccttcttatagcgttg 2979

                     
Query: 448  ccagttgca 456
            | |||||||
Sbjct: 2980 ctagttgca 2988



to top

>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome
          Length = 157089

 Score =  198 bits (100), Expect = 1e-47
 Identities = 148/164 (90%), Gaps = 5/164 (3%)
 Strand = Plus / Minus

                                                                          
Query: 26     gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 148001 gtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtgaggt 147942

                                                                          
Query: 86     gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccactatgagtttgga 145
              ||||||||||||| |||||||||||||||||||||||||||||||||| |       |||
Sbjct: 147941 gttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccacaa-----aagga 147887

                                                          
Query: 146    accctgaacagaccgccggtgttaagccggaggaaggagaggat 189
              |||||  |||||| ||||||| ||||||||||||||| ||||||
Sbjct: 147886 accctagacagactgccggtgataagccggaggaaggtgaggat 147843



to top

>gb|AY387369.1| Uncultured eukaryote clone OT124 16S ribosomal RNA gene, partial
            sequence
          Length = 1056

 Score =  196 bits (99), Expect = 5e-47
 Identities = 112/115 (97%), Gaps = 1/115 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 942  cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 1001

                                                                   
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccc 116
            ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1002 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccc 1056



to top

>gb|AF393589.1| Cosmarium botrytis small subunit ribosomal RNA (rrs) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 1406

 Score =  196 bits (99), Expect = 5e-47
 Identities = 149/164 (90%), Gaps = 5/164 (3%)
 Strand = Plus / Plus

                                                                        
Query: 26   gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 949  gtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtgaggt 1008

                                                                        
Query: 86   gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccactatgagtttgga 145
            ||||||||||||| ||||||||||||||||||||||||||||||||||    ||   |||
Sbjct: 1009 gttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccac----ag-aagga 1063

                                                        
Query: 146  accctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            |||||  |||||| ||||||| ||||||||||||||| ||||||
Sbjct: 1064 accctagacagactgccggtgataagccggaggaaggtgaggat 1107



to top

>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome
          Length = 144170

 Score =  194 bits (98), Expect = 2e-46
 Identities = 166/186 (89%), Gaps = 2/186 (1%)
 Strand = Plus / Minus

                                                                          
Query: 6      gaatcctcttga-agagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64
              ||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 140842 gaatcttcttgagagagaggagtgccctcgggaacgcggacacaggtggtgcatggctgt 140783

                                                                          
Query: 65     cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124
              |||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||| |
Sbjct: 140782 cgtcagctcgtgccgtgaggtgttgggttgagtcccgcaacgagcgcaaccctcgtgtct 140723

                                                                          
Query: 125    agttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183
              |||||||| |  || | |||||||||| ||||||| ||||| |   |||||||||| || 
Sbjct: 140722 agttgccatcattgggcttggaaccctaaacagactgccggcgaggagccggaggagggt 140663

                    
Query: 184    gaggat 189
              ||||||
Sbjct: 140662 gaggat 140657



 Score =  194 bits (98), Expect = 2e-46
 Identities = 166/186 (89%), Gaps = 2/186 (1%)
 Strand = Plus / Plus

                                                                         
Query: 6     gaatcctcttga-agagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64
             ||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 81035 gaatcttcttgagagagaggagtgccctcgggaacgcggacacaggtggtgcatggctgt 81094

                                                                         
Query: 65    cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124
             |||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||| |
Sbjct: 81095 cgtcagctcgtgccgtgaggtgttgggttgagtcccgcaacgagcgcaaccctcgtgtct 81154

                                                                         
Query: 125   agttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183
             |||||||| |  || | |||||||||| ||||||| ||||| |   |||||||||| || 
Sbjct: 81155 agttgccatcattgggcttggaaccctaaacagactgccggcgaggagccggaggagggt 81214

                   
Query: 184   gaggat 189
             ||||||
Sbjct: 81215 gaggat 81220



to top

>gb|AF393611.1| Spirogyra maxima small subunit ribosomal RNA (rrs) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 1458

 Score =  192 bits (97), Expect = 8e-46
 Identities = 140/155 (90%), Gaps = 7/155 (4%)
 Strand = Plus / Plus

                                                                        
Query: 35   ggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggtta 94
            |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 957  ggaacgtggacacaggtggtgcatggctgtcgtcagctcgtgccgtgaggtgttgggtta 1016

                                                                        
Query: 95   agtctcgcaacgagcgcaaccctcgtgtttagttgccactatgagtttggaaccctgaac 154
            |||| |||||||||||||||||||||||||||||||||| |       |||||||| |||
Sbjct: 1017 agtcccgcaacgagcgcaaccctcgtgtttagttgccacaa-------ggaaccctaaac 1069

                                               
Query: 155  agaccgccggtgttaagccggaggaaggagaggat 189
            |||| ||||||| ||||||||||||||| ||||||
Sbjct: 1070 agactgccggtgataagccggaggaaggtgaggat 1104



to top

>gb|U24596.1|SMU24596 Spirogyra maxima chloroplast 16S rRNA gene, complete sequence
          Length = 1657

 Score =  192 bits (97), Expect = 8e-46
 Identities = 140/155 (90%), Gaps = 7/155 (4%)
 Strand = Plus / Plus

                                                                        
Query: 35   ggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggtta 94
            |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1084 ggaacgtggacacaggtggtgcatggctgtcgtcagctcgtgccgtgaggtgttgggtta 1143

                                                                        
Query: 95   agtctcgcaacgagcgcaaccctcgtgtttagttgccactatgagtttggaaccctgaac 154
            |||| |||||||||||||||||||||||||||||||||| |       |||||||| |||
Sbjct: 1144 agtcccgcaacgagcgcaaccctcgtgtttagttgccacaa-------ggaaccctaaac 1196

                                               
Query: 155  agaccgccggtgttaagccggaggaaggagaggat 189
            |||| ||||||| ||||||||||||||| ||||||
Sbjct: 1197 agactgccggtgataagccggaggaaggtgaggat 1231



to top

>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence
          Length = 279448

 Score =  186 bits (94), Expect = 5e-44
 Identities = 110/113 (97%), Gaps = 3/113 (2%)
 Strand = Plus / Minus

                                                                          
Query: 3      cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
              |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145580 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 145521

                                                                   
Query: 62     tgtcgtcagctcgtgccgtaag--gtgttgggttaagtctcgcaacgagcgca 112
              ||||||||||||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 145520 tgtcgtcagctcgtgccgtaaggtgtgttgggttaagtctcgcaacgagcgca 145468



to top

>gb|U24584.1|ETU24584 Ephedra trifurca chloroplast 16S rRNA gene, partial sequence
          Length = 1428

 Score =  186 bits (94), Expect = 5e-44
 Identities = 165/186 (88%), Gaps = 2/186 (1%)
 Strand = Plus / Plus

                                                                        
Query: 6    gaatcctcttgaagagaggg-gtgccctcgggaacgcggacacaggtggtgcatggctgt 64
            |||||||| |||| || ||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 916  gaatcctcctgaaaagggggagtgccttcgggaacacggacacaggtggtgcatggctgt 975

                                                                        
Query: 65   cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124
            ||||||||||||||||| |||||||||||||||| ||||||||||||||||||  |||||
Sbjct: 976  cgtcagctcgtgccgtagggtgttgggttaagtcccgcaacgagcgcaacccttttgttt 1035

                                                                        
Query: 125  agttgccactatg-agtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183
            ||||||||   || ||||||||||||| ||||||| || || | | ||||||||||||| 
Sbjct: 1036 agttgccatcgtgtagtttggaaccctaaacagactgctggcgatgagccggaggaaggt 1095

                  
Query: 184  gaggat 189
            ||||||
Sbjct: 1096 gaggat 1101



to top

>gb|AY054378.1| Hordeum vulgare clone HmaLTR-INS Sukkula retrotransposon long
            terminal repeat, complete sequence
          Length = 7919

 Score =  184 bits (93), Expect = 2e-43
 Identities = 222/261 (85%), Gaps = 3/261 (1%)
 Strand = Plus / Plus

                                                                        
Query: 215  cttcacggattcgttcttcttccatgctggatc-caggcaatatgat-catttccctata 272
            ||||| ||| |||||||||||||  || ||||| ||||||| ||||  ||||||| |  |
Sbjct: 2837 cttcatggaatcgttcttcttccgagcgggatctcaggcaagatgacacatttccgtgga 2896

                                                                        
Query: 273  taccagtactatcattgctatgctagttgtgtcagttctatcgctatgtctcgctatcta 332
            ||||| ||||||||||||||||||||||||     ||||| || ||||||| |||| |||
Sbjct: 2897 taccactactatcattgctatgctagttgtcctgcttctaccgttatgtcttgctaccta 2956

                                                                        
Query: 333  ccacctgttatgtcaagcctccctacatttccatgaaaagcctctaacccctccacatcc 392
            |||| |||| |||| |||||||| ||||| |||||| ||||||||| ||||| |||||||
Sbjct: 2957 ccacttgtt-tgtcgagcctcccaacattgccatgataagcctctagccccttcacatcc 3015

                                                                        
Query: 393  gagcaaacctttgtttggctatgttactgcttgcttggcccttcttatagcgtttccagt 452
             |||||||||||||||||||||||||| |||||||   |||||||||||||||||| || 
Sbjct: 3016 cagcaaacctttgtttggctatgttaccgcttgctcaacccttcttatagcgtttctagc 3075

                                 
Query: 453  tgcaagtgtagttgcttccat 473
            |||| ||| ||||||||||||
Sbjct: 3076 tgcaggtgcagttgcttccat 3096



to top

>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome
          Length = 118360

 Score =  184 bits (93), Expect = 2e-43
 Identities = 148/165 (89%), Gaps = 1/165 (0%)
 Strand = Plus / Minus

                                                                          
Query: 26     gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85
              ||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| || |
Sbjct: 116531 gtgccttcgggagcgcggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagat 116472

                                                                          
Query: 86     gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttgg 144
              ||||||||||||| ||||||||||||||||||||| ||||||||||| || | |||| ||
Sbjct: 116471 gttgggttaagtcccgcaacgagcgcaaccctcgtttttagttgccagtattaagttggg 116412

                                                           
Query: 145    aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
               ||||| || |||| ||||||| ||||||||||||||| ||||||
Sbjct: 116411 caccctaaaaagactgccggtgataagccggaggaaggtgaggat 116367



 Score =  184 bits (93), Expect = 2e-43
 Identities = 148/165 (89%), Gaps = 1/165 (0%)
 Strand = Plus / Plus

                                                                         
Query: 26    gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85
             ||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| || |
Sbjct: 85457 gtgccttcgggagcgcggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagat 85516

                                                                         
Query: 86    gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttgg 144
             ||||||||||||| ||||||||||||||||||||| ||||||||||| || | |||| ||
Sbjct: 85517 gttgggttaagtcccgcaacgagcgcaaccctcgtttttagttgccagtattaagttggg 85576

                                                          
Query: 145   aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
              ||||| || |||| ||||||| ||||||||||||||| ||||||
Sbjct: 85577 caccctaaaaagactgccggtgataagccggaggaaggtgaggat 85621



to top

>gb|AF244555.1|AF244555 Gnetum leyboldii 16S ribosomal RNA gene, partial sequence;
            chloroplast gene for chloroplast product
          Length = 1448

 Score =  184 bits (93), Expect = 2e-43
 Identities = 148/165 (89%), Gaps = 1/165 (0%)
 Strand = Plus / Plus

                                                                        
Query: 26   gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85
            ||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 967  gtgccttcgggaacacggccacaggtggtgcatggctgtcgtcagctcgtgccgtagggt 1026

                                                                        
Query: 86   gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-ctatgagtttgg 144
            ||||||||||||| ||||||||||||||||||  ||||||||||||| |   ||||||||
Sbjct: 1027 gttgggttaagtcccgcaacgagcgcaacccttttgtttagttgccatcgtggagtttgg 1086

                                                         
Query: 145  aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            |||||| |||||||||| || | | ||||||||||||| ||||||
Sbjct: 1087 aaccctaaacagaccgctggcgatgagccggaggaaggtgaggat 1131



to top

>gb|AY942956.1| Uncultured Pseudomonas sp. clone 29 16S ribosomal RNA gene, partial
           sequence
          Length = 960

 Score =  182 bits (92), Expect = 8e-43
 Identities = 111/116 (95%), Gaps = 1/116 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| ||| || ||||| ||||||||||||||||||||||||||||||
Sbjct: 469 cgcgaatcctcttgaaagagcggagtgccttcgggaacgcggacacaggtggtgcatggc 528

                                                                   
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccct 117
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 529 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccct 584



to top

>gb|U67743.1|CCU67743 Cynomorium coccineum chloroplast 16S ribosomal RNA gene, partial
            sequence
          Length = 1398

 Score =  182 bits (92), Expect = 8e-43
 Identities = 110/116 (94%)
 Strand = Plus / Plus

                                                                        
Query: 17   aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76
            |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 909  aagataggggtgccctcgggaacgtggacacaggtggtgcatggctgtcgtcagctcgtg 968

                                                                    
Query: 77   ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca 132
            |||||||||||||||||||||| |  |||||||||||||||| |||||||||||||
Sbjct: 969  ccgtaaggtgttgggttaagtcccctaacgagcgcaaccctcatgtttagttgcca 1024



to top

>gb|U67740.1|BAU67740 Bdallophyton americanum chloroplast 16S ribosomal RNA gene, partial
            sequence
          Length = 1483

 Score =  182 bits (92), Expect = 8e-43
 Identities = 117/124 (94%), Gaps = 1/124 (0%)
 Strand = Plus / Plus

                                                                        
Query: 35   ggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggtta 94
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 ggaacgtggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggtta 1069

                                                                        
Query: 95   agtctcgcaacgagcgcaaccctcgtgtttagttgccactatgagtttggaaccctgaac 154
            |||||||||||||||||||||||| ||||||||||||| | | || ||||||| ||||||
Sbjct: 1070 agtctcgcaacgagcgcaaccctcatgtttagttgccattgtcag-ttggaactctgaac 1128

                
Query: 155  agac 158
            ||||
Sbjct: 1129 agac 1132



to top

>gb|U24591.1|SAU24591 Selaginella apoda chloroplast 16S rRNA gene, partial sequence
          Length = 1446

 Score =  180 bits (91), Expect = 3e-42
 Identities = 167/189 (88%), Gaps = 5/189 (2%)
 Strand = Plus / Plus

                                                                        
Query: 6    gaatcctcttga-agagaggggtgccct---cgggaacgcggacacaggtggtgcatggc 61
            |||||||||||| |||||||||||||||   ||||||| |||||||||||||||||||||
Sbjct: 931  gaatcctcttgagagagaggggtgccctagccgggaacacggacacaggtggtgcatggc 990

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||||||| ||| |||||||| |||| ||||||||||||||||||||||
Sbjct: 991  tgtcgtcagctcgtgccgtgaggcgttgggttgagtcccgcaacgagcgcaaccctcgtg 1050

                                                                        
Query: 122  tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
            ||||||||||| |  || | |||||||||| |||| || ||||| | | |||||||||| 
Sbjct: 1051 tttagttgccatcattgggcttggaaccctaaacatactgccggcgatgagccggaggag 1110

                     
Query: 181  ggagaggat 189
            || ||||||
Sbjct: 1111 ggtgaggat 1119



to top

>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome
          Length = 165372

 Score =  176 bits (89), Expect = 5e-41
 Identities = 95/97 (97%)
 Strand = Plus / Plus

                                                                         
Query: 34    gggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggtt 93
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 94065 gggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtgaggtgttgggtt 94124

                                                  
Query: 94    aagtctcgcaacgagcgcaaccctcgtgtttagttgc 130
             ||||| |||||||||||||||||||||||||||||||
Sbjct: 94125 aagtcccgcaacgagcgcaaccctcgtgtttagttgc 94161



to top

>gb|AC152494.1| Zea mays BAC clone Z418K17, complete sequence
          Length = 195448

 Score =  176 bits (89), Expect = 5e-41
 Identities = 98/101 (97%)
 Strand = Plus / Plus

                                                                         
Query: 51    tggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcg 110
             |||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 63829 tggtgcatggttgtcgtcatctcgtgtcgtaaggtgttgggttaagtctcgcaacgagcg 63888

                                                      
Query: 111   caaccctcgtgtttagttgccactatgagtttggaaccctg 151
             |||||||||||||||||||||||||||||||||||||||||
Sbjct: 63889 caaccctcgtgtttagttgccactatgagtttggaaccctg 63929



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 165   tgttaagccggaggaaggagaggat 189
             ||||||||| |||||||||||||||
Sbjct: 63928 tgttaagccagaggaaggagaggat 63952



to top

>gb|AF497789.1| Zygnema sp. KA-2002 16S ribosomal RNA gene, partial sequence;
           chloroplast gene for chloroplast product
          Length = 808

 Score =  176 bits (89), Expect = 5e-41
 Identities = 95/97 (97%)
 Strand = Plus / Plus

                                                                       
Query: 34  gggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggtt 93
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 632 gggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtgaggtgttgggtt 691

                                                
Query: 94  aagtctcgcaacgagcgcaaccctcgtgtttagttgc 130
           ||||| |||||||||||||||||||||||||||||||
Sbjct: 692 aagtcccgcaacgagcgcaaccctcgtgtttagttgc 728



to top

>gb|AF497787.1| Coleochaete irregularis 16S ribosomal RNA gene, partial sequence;
           chloroplast gene for chloroplast product
          Length = 812

 Score =  176 bits (89), Expect = 5e-41
 Identities = 140/157 (89%), Gaps = 1/157 (0%)
 Strand = Plus / Plus

                                                                       
Query: 34  gggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggtt 93
           ||||||| ||||||||||||||||||||||||||||||||||| ||| || |||||||||
Sbjct: 632 gggaacgtggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagatgttgggtt 691

                                                                       
Query: 94  aagtctcgcaacgagcgcaaccctcgtgtttagttgcca-ctatgagtttggaaccctga 152
           ||||| |||||||||||||||||| || | ||||||||| |  | |||||||||| || |
Sbjct: 692 aagtcccgcaacgagcgcaacccttgtatctagttgccascgttsagtttggaacyctaa 751

                                                
Query: 153 acagaccgccggtgttaagccggaggaaggagaggat 189
           |||||| ||||||| ||||||||||||||| ||||||
Sbjct: 752 acagactgccggtgataagccggaggaaggtgaggat 788



to top

>gb|AY425776.1| Uncultured phototrophic eukaryote clone 1790-8 16S ribosomal RNA
            gene, partial sequence; chloroplast
          Length = 1412

 Score =  174 bits (88), Expect = 2e-40
 Identities = 97/100 (97%)
 Strand = Plus / Plus

                                                                        
Query: 33   cgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggt 92
            ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 982  cgggagcgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtgaggtgttgggt 1041

                                                    
Query: 93   taagtctcgcaacgagcgcaaccctcgtgtttagttgcca 132
            |||||| |||||||||||||||||||||||||||||||||
Sbjct: 1042 taagtcccgcaacgagcgcaaccctcgtgtttagttgcca 1081



to top

>gb|AY054379.1| Hordeum murinum clone HmuLTR-INS Sukkula retrotransposon long
            terminal repeat, complete sequence
          Length = 7586

 Score =  172 bits (87), Expect = 7e-40
 Identities = 232/274 (84%), Gaps = 6/274 (2%)
 Strand = Plus / Plus

                                                                        
Query: 184  gaggattcattcaactacgtcagtttgtctacttcacggattcgttcttcttccatgctg 243
            |||||||| ||| |||||||  ||| || |||||||||| ||||||||||||||| || |
Sbjct: 2518 gaggattcgttcgactacgttggttcgtttacttcacggtttcgttcttcttccaagcgg 2577

                                                                        
Query: 244  gatc-caggcaatatgatcatttccctatataccagtactatcattgctatgctagttgt 302
            |||| | ||||| ||||||||||||||  |||||| |||||||||||| |||||||||||
Sbjct: 2578 gatctcgggcaagatgatcatttccctggataccattactatcattgccatgctagttgt 2637

                                                                        
Query: 303  gtcagttctatcgctatgtctcgctatctaccacctgttatgtcaagcctccctacattt 362
             ||| | ||||| |  |||||||||| ||||||| || | || |||||||||| | | | 
Sbjct: 2638 ttcattgctatcac--tgtctcgctacctaccacttg-tgtgccaagcctccc-aaagtg 2693

                                                                        
Query: 363  ccatgaaaagcctctaacccctccacatccgagcaaacctttgtttggctatgttactgc 422
            |||||||||||||||||||||||||| ||  |||||| | ||||||||||||||||| ||
Sbjct: 2694 ccatgaaaagcctctaacccctccacgtctcagcaaa-cattgtttggctatgttaccgc 2752

                                              
Query: 423  ttgcttggcccttcttatagcgtttccagttgca 456
            |||||  |||||||||||||| || | |||||||
Sbjct: 2753 ttgctcagcccttcttatagcattgctagttgca 2786



to top

>gb|AF355383.1| Microcoleus steenstrupii clone 152-2A 16S ribosomal RNA gene,
           partial sequence
          Length = 989

 Score =  172 bits (87), Expect = 7e-40
 Identities = 121/131 (92%), Gaps = 1/131 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||| ||||| |||||| |||| ||||||||||||||||||
Sbjct: 600 cgcgaatcctcttgaaagagaggagtgccttcgggagcgcgaacacaggtggtgcatggc 659

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||| 
Sbjct: 660 tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaaccctcgtc 719

                      
Query: 122 tttagttgcca 132
           |||||||||||
Sbjct: 720 tttagttgcca 730



to top

>gb|AY702116.1| Nephroselmis pyriformis strain CCMP717 16S ribosomal RNA gene,
           partial sequence; plastid
          Length = 906

 Score =  170 bits (86), Expect = 3e-39
 Identities = 101/106 (95%)
 Strand = Plus / Plus

                                                                       
Query: 26  gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85
           ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| || |
Sbjct: 624 gtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagat 683

                                                         
Query: 86  gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcc 131
           ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 684 gttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgcc 729



to top

>gb|AF497790.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence;
           chloroplast gene for chloroplast product
          Length = 819

 Score =  168 bits (85), Expect = 1e-38
 Identities = 165/189 (87%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||| ||||||| |||| | ||||| | | || |||||||||||||||||||||||
Sbjct: 603 cgcgaatcttcttgaaagagaagagtgcctttgtgagcgcggacacaggtggtgcatggc 662

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||| 
Sbjct: 663 tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaaccctcgtt 722

                                                                       
Query: 122 tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180
           ||||||||||| || |  ||| || ||||| || |||| ||||||| |||||||||||||
Sbjct: 723 tttagttgccagtatttggttgggcaccctaaagagactgccggtgataagccggaggaa 782

                    
Query: 181 ggagaggat 189
           || ||||||
Sbjct: 783 ggtgaggat 791



to top

>gb|AF497788.1| Chaetosphaeridium globosum 16S ribosomal RNA gene, partial
           sequence; chloroplast gene for chloroplast product
          Length = 816

 Score =  168 bits (85), Expect = 1e-38
 Identities = 146/165 (88%), Gaps = 1/165 (0%)
 Strand = Plus / Plus

                                                                       
Query: 26  gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85
           ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| || |
Sbjct: 624 gtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagat 683

                                                                       
Query: 86  gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttgg 144
           ||||||||||||| ||||||||||||||||||| ||||||||| |||  |   || ||||
Sbjct: 684 gttgggttaagtcccgcaacgagcgcaaccctcatgtttagttaccatgacaaagattgg 743

                                                        
Query: 145 aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
           ||||||  |||||| |||||||  |||||||||||||| ||||||
Sbjct: 744 aaccctagacagactgccggtgacaagccggaggaaggtgaggat 788



to top

>gb|AF393583.1| Chaetosphaeridium globosum SAG 26.98 small subunit ribosomal RNA
            (rrs) gene, partial sequence; chloroplast gene for
            chloroplast product
          Length = 1461

 Score =  168 bits (85), Expect = 1e-38
 Identities = 146/165 (88%), Gaps = 1/165 (0%)
 Strand = Plus / Plus

                                                                        
Query: 26   gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85
            ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| || |
Sbjct: 943  gtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagat 1002

                                                                        
Query: 86   gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttgg 144
            ||||||||||||| ||||||||||||||||||| ||||||||| |||  |   || ||||
Sbjct: 1003 gttgggttaagtcccgcaacgagcgcaaccctcatgtttagttaccatgacaaagattgg 1062

                                                         
Query: 145  aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
            ||||||  |||||| |||||||  |||||||||||||| ||||||
Sbjct: 1063 aaccctagacagactgccggtgacaagccggaggaaggtgaggat 1107



to top

>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome
          Length = 131183

 Score =  168 bits (85), Expect = 1e-38
 Identities = 146/165 (88%), Gaps = 1/165 (0%)
 Strand = Plus / Minus

                                                                          
Query: 26     gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85
              ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| || |
Sbjct: 127458 gtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagat 127399

                                                                          
Query: 86     gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttgg 144
              ||||||||||||| ||||||||||||||||||| ||||||||| |||  |   || ||||
Sbjct: 127398 gttgggttaagtcccgcaacgagcgcaaccctcatgtttagttaccatgacaaagattgg 127339

                                                           
Query: 145    aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
              ||||||  |||||| |||||||  |||||||||||||| ||||||
Sbjct: 127338 aaccctagacagactgccggtgacaagccggaggaaggtgaggat 127294



 Score =  168 bits (85), Expect = 1e-38
 Identities = 146/165 (88%), Gaps = 1/165 (0%)
 Strand = Plus / Plus

                                                                         
Query: 26    gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85
             ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| || |
Sbjct: 92408 gtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagat 92467

                                                                         
Query: 86    gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttgg 144
             ||||||||||||| ||||||||||||||||||| ||||||||| |||  |   || ||||
Sbjct: 92468 gttgggttaagtcccgcaacgagcgcaaccctcatgtttagttaccatgacaaagattgg 92527

                                                          
Query: 145   aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189
             ||||||  |||||| |||||||  |||||||||||||| ||||||
Sbjct: 92528 aaccctagacagactgccggtgacaagccggaggaaggtgaggat 92572



to top

>gb|AY689654.1| Uncultured cyanobacterium clone BPM2_A05 16S ribosomal RNA gene,
           partial sequence
          Length = 824

 Score =  167 bits (84), Expect = 5e-38
 Identities = 144/164 (87%), Gaps = 5/164 (3%)
 Strand = Plus / Plus

                                                                       
Query: 26  gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85
           ||||| |||||||| |||||||||||||||||||| ||||||||||||||| ||| || |
Sbjct: 486 gtgccttcgggaacacggacacaggtggtgcatggttgtcgtcagctcgtgtcgtgagat 545

                                                                       
Query: 86  gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccactatgagtttgga 145
           ||||||||||||| ||||||||||||||||||||| ||||||||||| ||||     |||
Sbjct: 546 gttgggttaagtcccgcaacgagcgcaaccctcgtttttagttgccaatatg-----gga 600

                                                       
Query: 146 accctgaacagaccgccggtgttaagccggaggaaggagaggat 189
           ||||| || |||| ||||||| ||| ||||||||||| ||||||
Sbjct: 601 accctaaagagactgccggtgataaaccggaggaaggtgaggat 644



to top

>gb|AF218370.1| Arthronema gygaxiana UTCC 393 16S ribosomal RNA gene, partial
            sequence
          Length = 1388

 Score =  165 bits (83), Expect = 2e-37
 Identities = 120/131 (91%), Gaps = 1/131 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| | |||| ||||| |||||| |||| ||||||||||||||||||
Sbjct: 894  cgcgaatcctcttgaaagggaggagtgccttcgggagcgcgaacacaggtggtgcatggc 953

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||| 
Sbjct: 954  tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaaccctcgtt 1013

                       
Query: 122  tttagttgcca 132
            |||||||||||
Sbjct: 1014 tttagttgcca 1024



to top

>gb|AY218828.1| Nostoc muscorum CENA61 16S ribosomal RNA gene, partial sequence
          Length = 1338

 Score =  165 bits (83), Expect = 2e-37
 Identities = 120/131 (91%), Gaps = 1/131 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| |||| | ||||| |||||| |||| ||||||||||||||||||
Sbjct: 900  cgcgaatcctcttgaaagagaagagtgccttcgggagcgcgaacacaggtggtgcatggc 959

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||| 
Sbjct: 960  tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaaccctcgtt 1019

                       
Query: 122  tttagttgcca 132
            |||||||||||
Sbjct: 1020 tttagttgcca 1030



to top

>gb|AY239603.1| Leptolyngbya sp. CNP1-B1-4 16S ribosomal RNA gene, partial sequence
          Length = 1010

 Score =  165 bits (83), Expect = 2e-37
 Identities = 120/131 (91%), Gaps = 1/131 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| | |||| ||||| |||||| |||| ||||||||||||||||||
Sbjct: 621 cgcgaatcctcttgaaagggaggagtgccttcgggagcgcgaacacaggtggtgcatggc 680

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||| 
Sbjct: 681 tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaaccctcgtt 740

                      
Query: 122 tttagttgcca 132
           |||||||||||
Sbjct: 741 tttagttgcca 751



to top

>gb|AY239600.1| Leptolyngbya sp. CNP1-B3-C9 16S ribosomal RNA gene, partial
           sequence
          Length = 1009

 Score =  165 bits (83), Expect = 2e-37
 Identities = 120/131 (91%), Gaps = 1/131 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| |||||| ||||| |||||| |||| ||||||||||||||||||
Sbjct: 620 cgcgaatcctcttgaaagagaggagtgccttcgggagcgcgaacacaggtggtgcatggc 679

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||| ||| 
Sbjct: 680 tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaacccacgtt 739

                      
Query: 122 tttagttgcca 132
           |||||||||||
Sbjct: 740 tttagttgcca 750



to top

>gb|AF132778.1| Pseudanabaena sp. PCC 6903 small subunit ribosomal RNA gene, partial
            sequence
          Length = 1407

 Score =  165 bits (83), Expect = 2e-37
 Identities = 120/131 (91%), Gaps = 1/131 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            |||||||||||||||| | |||| ||||| |||||| |||| ||||||||||||||||||
Sbjct: 916  cgcgaatcctcttgaaagggaggagtgccttcgggagcgcgaacacaggtggtgcatggc 975

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||| 
Sbjct: 976  tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaaccctcgta 1035

                       
Query: 122  tttagttgcca 132
            |||||||||||
Sbjct: 1036 tttagttgcca 1046



to top

>gb|AF132787.1| Pseudanabaena sp. PCC 7402 small subunit ribosomal RNA gene,
           partial sequence
          Length = 1179

 Score =  165 bits (83), Expect = 2e-37
 Identities = 120/131 (91%), Gaps = 1/131 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| | |||| ||||| |||||| |||| ||||||||||||||||||
Sbjct: 687 cgcgaatcctcttgaaagggaggagtgccttcgggagcgcgaacacaggtggtgcatggc 746

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||| 
Sbjct: 747 tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaaccctcgta 806

                      
Query: 122 tttagttgcca 132
           |||||||||||
Sbjct: 807 tttagttgcca 817



to top

>gb|AF355398.1| Leptolyngbya schmidlei clone 145-A3 16S ribosomal RNA gene, partial
           sequence
          Length = 988

 Score =  165 bits (83), Expect = 2e-37
 Identities = 120/131 (91%), Gaps = 1/131 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
           |||||||||||||||| | |||| ||||| |||||| |||| ||||||||||||||||||
Sbjct: 599 cgcgaatcctcttgaaagggaggagtgccttcgggagcgcgaacacaggtggtgcatggc 658

                                                                       
Query: 62  tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
           ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||| 
Sbjct: 659 tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaaccctcgtt 718

                      
Query: 122 tttagttgcca 132
           |||||||||||
Sbjct: 719 tttagttgcca 729



to top

>gb|DQ378254.1| Uncultured soil bacterium clone M37_Pitesti 16S ribosomal RNA gene,
            complete sequence
          Length = 1458

 Score =  165 bits (83), Expect = 2e-37
 Identities = 120/131 (91%), Gaps = 1/131 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61
            ||||||||||| |||| | |||| ||||| |||||| |||| ||||||||||||||||||
Sbjct: 950  cgcgaatcctcctgaaagggaggagtgccttcgggagcgcgaacacaggtggtgcatggc 1009

                                                                        
Query: 62   tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121
            ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||||
Sbjct: 1010 tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaaccctcgtg 1069

                       
Query: 122  tttagttgcca 132
            |||||||||||
Sbjct: 1070 tttagttgcca 1080


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,227,017
Number of Sequences: 3902068
Number of extensions: 4227017
Number of successful extensions: 255123
Number of sequences better than 10.0: 130998
Number of HSP's better than 10.0 without gapping: 130720
Number of HSP's successfully gapped in prelim test: 302
Number of HSP's that attempted gapping in prelim test: 81915
Number of HSP's gapped (non-prelim): 159686
length of query: 527
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 504
effective length of database: 17,143,297,704
effective search space: 8640222042816
effective search space used: 8640222042816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top