| Clone Name | basd1o14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328572 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 328513 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328512 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 328453 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328452 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 328393 Query: 182 gagaggat 189 |||||||| Sbjct: 328392 gagaggat 328385 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 46 acaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaac 105 ||||||| ||||||||||||||||||||||| ||| || |||| ||| ||||| ||| Sbjct: 420496 acaggtgctgcatggctgtcgtcagctcgtgtcgtgagatgtttggtcaagtcctataac 420437 Query: 106 gagcgcaaccctcgt 120 ||||| ||||||||| Sbjct: 420436 gagcgaaaccctcgt 420422
>gb|DQ490950.1| Festuca arundinacea 16S ribosomal RNA gene, partial sequence; chloroplast Length = 812 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 543 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 484 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 483 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 424 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 364 Query: 182 gagaggat 189 |||||||| Sbjct: 363 gagaggat 356
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122901 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 122842 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122841 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 122782 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122781 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 122722 Query: 182 gagaggat 189 |||||||| Sbjct: 122721 gagaggat 122714 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92255 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 92314 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92315 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 92374 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92375 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 92434 Query: 182 gagaggat 189 |||||||| Sbjct: 92435 gagaggat 92442
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122901 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 122842 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122841 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 122782 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122781 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 122722 Query: 182 gagaggat 189 |||||||| Sbjct: 122721 gagaggat 122714 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92255 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 92314 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92315 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 92374 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92375 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 92434 Query: 182 gagaggat 189 |||||||| Sbjct: 92435 gagaggat 92442
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122850 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 122791 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122790 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 122731 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122730 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 122671 Query: 182 gagaggat 189 |||||||| Sbjct: 122670 gagaggat 122663 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92200 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 92259 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92260 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 92319 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92320 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 92379 Query: 182 gagaggat 189 |||||||| Sbjct: 92380 gagaggat 92387
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126628 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 126569 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126568 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 126509 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126508 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 126449 Query: 182 gagaggat 189 |||||||| Sbjct: 126448 gagaggat 126441 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96109 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 96168 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96169 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 96228 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96229 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 96288 Query: 182 gagaggat 189 |||||||| Sbjct: 96289 gagaggat 96296
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122871 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 122812 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122811 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 122752 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122751 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 122692 Query: 182 gagaggat 189 |||||||| Sbjct: 122691 gagaggat 122684 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92247 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 92306 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92307 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 92366 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92367 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 92426 Query: 182 gagaggat 189 |||||||| Sbjct: 92427 gagaggat 92434
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119300 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 119359 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119360 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 119419 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119420 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 119479 Query: 182 gagaggat 189 |||||||| Sbjct: 119480 gagaggat 119487 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87425 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 87484 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87485 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 87544 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87545 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 87604 Query: 182 gagaggat 189 |||||||| Sbjct: 87605 gagaggat 87612 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11022 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 11081 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11082 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 11141 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11142 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 11201 Query: 182 gagaggat 189 |||||||| Sbjct: 11202 gagaggat 11209
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137830 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 137889 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137890 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 137949 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137950 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 138009 Query: 182 gagaggat 189 |||||||| Sbjct: 138010 gagaggat 138017
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90438 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 90497 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90498 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 90557 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90558 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 90617 Query: 182 gagaggat 189 |||||||| Sbjct: 90618 gagaggat 90625
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47858 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 47799 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47798 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 47739 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47738 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 47679 Query: 182 gagaggat 189 |||||||| Sbjct: 47678 gagaggat 47671 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17260 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 17319 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17320 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 17379 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17380 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 17439 Query: 182 gagaggat 189 |||||||| Sbjct: 17440 gagaggat 17447
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61595 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61536 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61535 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 61476 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61475 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 61416 Query: 182 gagaggat 189 |||||||| Sbjct: 61415 gagaggat 61408
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24502 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 24561 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24562 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 24621 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24622 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 24681 Query: 182 gagaggat 189 |||||||| Sbjct: 24682 gagaggat 24689
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9265180 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 9265239 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9265240 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 9265299 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9265300 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 9265359 Query: 182 gagaggat 189 |||||||| Sbjct: 9265360 gagaggat 9265367 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9224680 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 9224739 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9224740 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 9224799 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9224800 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 9224859 Query: 182 gagaggat 189 |||||||| Sbjct: 9224860 gagaggat 9224867 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9206352 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 9206411 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9206412 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 9206471 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9206472 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 9206531 Query: 182 gagaggat 189 |||||||| Sbjct: 9206532 gagaggat 9206539 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9161274 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 9161333 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9161334 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 9161393 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9161394 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 9161453 Query: 182 gagaggat 189 |||||||| Sbjct: 9161454 gagaggat 9161461 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9129399 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 9129458 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9129459 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 9129518 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9129519 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 9129578 Query: 182 gagaggat 189 |||||||| Sbjct: 9129579 gagaggat 9129586 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9053096 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 9053155 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9053156 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 9053215 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9053216 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 9053275 Query: 182 gagaggat 189 |||||||| Sbjct: 9053276 gagaggat 9053283 Score = 335 bits (169), Expect = 9e-89 Identities = 182/185 (98%), Gaps = 1/185 (0%) Strand = Plus / Minus Query: 6 gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64 ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 23619305 gaatcctcttgaaagagaggggtgccctcgggaacgcgaacacaggtggtgcatggctgt 23619246 Query: 65 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23619245 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 23619186 Query: 125 agttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggag 184 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 23619185 agttgccactatgagtttggaaccctaaacagaccgccggtgttaagccggaggaaggag 23619126 Query: 185 aggat 189 ||||| Sbjct: 23619125 aggat 23619121
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19935167 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 19935226 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19935227 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 19935286 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19935287 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 19935346 Query: 182 gagaggat 189 |||||||| Sbjct: 19935347 gagaggat 19935354 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10384046 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 10384105 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10384106 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 10384165 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10384166 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 10384225 Query: 182 gagaggat 189 |||||||| Sbjct: 10384226 gagaggat 10384233 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10280270 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 10280211 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10280210 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 10280151 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10280150 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 10280091 Query: 182 gagaggat 189 |||||||| Sbjct: 10280090 gagaggat 10280083
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14179517 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 14179458 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14179457 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 14179398 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14179397 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 14179338 Query: 182 gagaggat 189 |||||||| Sbjct: 14179337 gagaggat 14179330
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14346440 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 14346499 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14346500 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 14346559 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14346560 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 14346619 Query: 182 gagaggat 189 |||||||| Sbjct: 14346620 gagaggat 14346627 Score = 325 bits (164), Expect = 8e-86 Identities = 183/188 (97%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 808121 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaagtggtgcatggc 808062 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808061 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 808002 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 808001 ttaagttgccactatgagtttggaaccctgaacagcccgccggtgttaagccggaggaag 807942 Query: 182 gagaggat 189 ||||||| Sbjct: 807941 tagaggat 807934 Score = 218 bits (110), Expect = 1e-53 Identities = 134/142 (94%) Strand = Plus / Plus Query: 48 aggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacga 107 ||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||| | Sbjct: 11194980 aggtggtgcatggttgtcgtcagctcgtgttgtaaggtgttggtttaagtctcgcaacaa 11195039 Query: 108 gcgcaaccctcgtgtttagttgccactatgagtttggaaccctgaacagaccgccggtgt 167 ||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 11195040 gcgcaacactcatgtttagttgccattatgagtttggaaccctgaacagaccgccggtgt 11195099 Query: 168 taagccggaggaaggagaggat 189 |||||||||||||||||||||| Sbjct: 11195100 taagccggaggaaggagaggat 11195121
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50876 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 50817 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50816 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 50757 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50756 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 50697 Query: 182 gagaggat 189 |||||||| Sbjct: 50696 gagaggat 50689
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126697 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 126638 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126637 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 126578 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126577 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 126518 Query: 182 gagaggat 189 |||||||| Sbjct: 126517 gagaggat 126510 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96140 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 96199 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96200 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 96259 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96260 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 96319 Query: 182 gagaggat 189 |||||||| Sbjct: 96320 gagaggat 96327
>gb|AF176637.1|AF176637 Plastid transformation vector pMSK49 plastid targeting region Length = 5270 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 325 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 265 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 205 Query: 182 gagaggat 189 |||||||| Sbjct: 204 gagaggat 197
>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0067K15 Length = 160162 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64398 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 64339 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64338 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 64279 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64278 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 64219 Query: 182 gagaggat 189 |||||||| Sbjct: 64218 gagaggat 64211
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0022A24 Length = 148347 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68362 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 68421 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68422 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 68481 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68482 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 68541 Query: 182 gagaggat 189 |||||||| Sbjct: 68542 gagaggat 68549
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2462 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 2521 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2522 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 2581 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2582 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 2641 Query: 182 gagaggat 189 |||||||| Sbjct: 2642 gagaggat 2649
>dbj|AK108725.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-C09, full insert sequence Length = 1602 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 610 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 669 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 670 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 729 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 730 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 789 Query: 182 gagaggat 189 |||||||| Sbjct: 790 gagaggat 797
>dbj|AK105341.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-G10, full insert sequence Length = 1448 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 583 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 643 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 703 Query: 182 gagaggat 189 |||||||| Sbjct: 704 gagaggat 711
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19946443 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 19946502 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19946503 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 19946562 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19946563 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 19946622 Query: 182 gagaggat 189 |||||||| Sbjct: 19946623 gagaggat 19946630 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10390085 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 10390144 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10390145 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 10390204 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10390205 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 10390264 Query: 182 gagaggat 189 |||||||| Sbjct: 10390265 gagaggat 10390272 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10286309 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 10286250 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10286249 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 10286190 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10286189 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 10286130 Query: 182 gagaggat 189 |||||||| Sbjct: 10286129 gagaggat 10286122
>emb|AJ555400.1|TTU555400 Triticum turgidum subsp. dicoccum partial chloroplast 16S rRNA gene Length = 1483 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 941 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 1000 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1001 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 1060 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1061 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 1120 Query: 182 gagaggat 189 |||||||| Sbjct: 1121 gagaggat 1128
>emb|AJ555402.1|ATA555402 Aegilops tauschii partial chloroplast 16S rRNA gene Length = 1483 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 941 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 1000 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1001 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 1060 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1061 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 1120 Query: 182 gagaggat 189 |||||||| Sbjct: 1121 gagaggat 1128
>emb|AJ555401.1|ASP555401 Aegilops speltoides partial chloroplast 16S rRNA gene Length = 1483 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 941 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 1000 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1001 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 1060 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1061 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 1120 Query: 182 gagaggat 189 |||||||| Sbjct: 1121 gagaggat 1128
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127414 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 127355 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127354 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 127295 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127294 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 127235 Query: 182 gagaggat 189 |||||||| Sbjct: 127234 gagaggat 127227 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96817 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 96876 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96877 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 96936 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96937 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 96996 Query: 182 gagaggat 189 |||||||| Sbjct: 96997 gagaggat 97004
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122844 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 122785 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122784 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 122725 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122724 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 122665 Query: 182 gagaggat 189 |||||||| Sbjct: 122664 gagaggat 122657 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92195 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 92254 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92255 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 92314 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92315 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 92374 Query: 182 gagaggat 189 |||||||| Sbjct: 92375 gagaggat 92382
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122894 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 122835 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122834 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 122775 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122774 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 122715 Query: 182 gagaggat 189 |||||||| Sbjct: 122714 gagaggat 122707 Score = 357 bits (180), Expect = 2e-95 Identities = 187/188 (99%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92000 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 92059 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92060 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 92119 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92120 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 92179 Query: 182 gagaggat 189 |||||||| Sbjct: 92180 gagaggat 92187
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 349 bits (176), Expect = 6e-93 Identities = 186/188 (98%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88615 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 88556 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88555 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 88496 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 88495 tttagttgccactatgagtttggaaccctgaacaaaccgccggtgttaagccggaggaag 88436 Query: 182 gagaggat 189 |||||||| Sbjct: 88435 gagaggat 88428
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 349 bits (176), Expect = 6e-93 Identities = 186/188 (98%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 126437 cgcgaatcctcttgaaagagaggggtgccctcgggaacccggacacaggtggtgcatggc 126378 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126377 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 126318 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126317 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 126258 Query: 182 gagaggat 189 |||||||| Sbjct: 126257 gagaggat 126250
>gb|DQ129641.1| Uncultured bacterium clone AKIW1139 16S ribosomal RNA gene, partial sequence Length = 1444 Score = 349 bits (176), Expect = 6e-93 Identities = 186/188 (98%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 937 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 996 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 997 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 1056 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1057 tttagttgccactatgagtttggaaccctgaatagaccgccggtgttaagccggaggaag 1116 Query: 182 gagaggat 189 |||||||| Sbjct: 1117 gagaggat 1124
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 349 bits (176), Expect = 6e-93 Identities = 186/188 (98%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9244815 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 9244756 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9244755 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 9244696 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 9244695 tttagttgccactatgagtttggaaccctgaacagaccgctggtgttaagccggaggaag 9244636 Query: 182 gagaggat 189 |||||||| Sbjct: 9244635 gagaggat 9244628 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 164 gtgttaagccggaggaaggagaggat 189 |||||||||| ||||||||||||||| Sbjct: 11864611 gtgttaagccagaggaaggagaggat 11864586
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 349 bits (176), Expect = 6e-93 Identities = 186/188 (98%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 12828978 cgcgaatcctcttgaaagagaggggtgccctcgggaacccggacacaggtggtgcatggc 12828919 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12828918 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 12828859 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12828858 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 12828799 Query: 182 gagaggat 189 |||||||| Sbjct: 12828798 gagaggat 12828791 Score = 349 bits (176), Expect = 6e-93 Identities = 186/188 (98%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884191 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 884132 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884131 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 884072 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 884071 tttagttgccactatgagtttggaaccctgaacaaaccgccggtgttaagccggaggaag 884012 Query: 182 gagaggat 189 |||||||| Sbjct: 884011 gagaggat 884004
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 349 bits (176), Expect = 6e-93 Identities = 186/188 (98%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56028 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 55969 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55968 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 55909 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 55908 tttagttgccactatgagtttggaaccctgaacagaccgctggtgttaagccggaggaag 55849 Query: 182 gagaggat 189 |||||||| Sbjct: 55848 gagaggat 55841
>emb|AJ239003.1|TAE239003 Triticum aestivum (L.) partial chloroplast 16S rRNA gene Length = 1482 Score = 349 bits (176), Expect = 6e-93 Identities = 186/188 (98%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 940 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 999 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1000 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaacccttgtg 1059 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1060 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 1119 Query: 182 gagaggat 189 |||||||| Sbjct: 1120 gagaggat 1127
>dbj|AB240470.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone: SRRT24 Length = 1478 Score = 341 bits (172), Expect = 1e-90 Identities = 185/188 (98%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 966 cgcgaatcctcttgaaagagaggagtgcccttgggaacgcggacacaggtggtgcatggc 1025 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1026 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 1085 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1086 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 1145 Query: 182 gagaggat 189 |||||||| Sbjct: 1146 gagaggat 1153
>gb|DQ417650.1| Festuca ovina 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 337 bits (170), Expect = 2e-89 Identities = 173/174 (99%) Strand = Plus / Plus Query: 16 gaagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgt 75 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 927 gaagagaggggtgcccttgggaacgcggacacaggtggtgcatggctgtcgtcagctcgt 986 Query: 76 gccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta 135 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 987 gccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta 1046 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1047 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 1100
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 335 bits (169), Expect = 9e-89 Identities = 182/185 (98%), Gaps = 1/185 (0%) Strand = Plus / Minus Query: 6 gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64 ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 61986 gaatcctcttgaaagagaggggtgccctcgggaacgcgaacacaggtggtgcatggctgt 61927 Query: 65 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61926 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 61867 Query: 125 agttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggag 184 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61866 agttgccactatgagtttggaaccctaaacagaccgccggtgttaagccggaggaaggag 61807 Query: 185 aggat 189 ||||| Sbjct: 61806 aggat 61802
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 325 bits (164), Expect = 8e-86 Identities = 183/188 (97%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 17329 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaagtggtgcatggc 17270 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17269 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 17210 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 17209 ttaagttgccactatgagtttggaaccctgaacagcccgccggtgttaagccggaggaag 17150 Query: 182 gagaggat 189 ||||||| Sbjct: 17149 tagaggat 17142
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 325 bits (164), Expect = 8e-86 Identities = 183/188 (97%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 86252 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaagtggtgcatggc 86193 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86192 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 86133 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 86132 ttaagttgccactatgagtttggaaccctgaacagcccgccggtgttaagccggaggaag 86073 Query: 182 gagaggat 189 ||||||| Sbjct: 86072 tagaggat 86065
>gb|DQ417649.1| Agrostis capillaris 16S ribosomal RNA gene, partial sequence; plastid Length = 1406 Score = 321 bits (162), Expect = 1e-84 Identities = 179/182 (98%), Gaps = 2/182 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 913 cgcgaatcctcttgaaagagaggggtgcccttggga-cgcggacacaggtggtgcatggc 971 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 972 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 1031 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1032 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 1091 Query: 182 ga 183 || Sbjct: 1092 ga 1093
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 295 bits (149), Expect = 7e-77 Identities = 181/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 142424 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 142365 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 142364 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 142305 Query: 122 tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 142304 tttagttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaa 142245 Query: 181 ggagaggat 189 || |||||| Sbjct: 142244 ggtgaggat 142236 Score = 295 bits (149), Expect = 7e-77 Identities = 181/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 107521 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 107580 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 107581 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 107640 Query: 122 tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 107641 tttagttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaa 107700 Query: 181 ggagaggat 189 || |||||| Sbjct: 107701 ggtgaggat 107709
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 295 bits (149), Expect = 7e-77 Identities = 181/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 145095 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 145036 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 145035 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 144976 Query: 122 tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 144975 tttagttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaa 144916 Query: 181 ggagaggat 189 || |||||| Sbjct: 144915 ggtgaggat 144907 Score = 295 bits (149), Expect = 7e-77 Identities = 181/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 108562 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 108621 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 108622 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 108681 Query: 122 tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 108682 tttagttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaa 108741 Query: 181 ggagaggat 189 || |||||| Sbjct: 108742 ggtgaggat 108750
>gb|DQ000201.1| Trewia nudiflora 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1434 Score = 295 bits (149), Expect = 7e-77 Identities = 181/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 921 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 980 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 981 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1040 Query: 122 tttagttgccact-atgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 1041 tttagttgccactgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1100 Query: 181 ggagaggat 189 || |||||| Sbjct: 1101 ggtgaggat 1109
>gb|AF244560.1|AF244560 Nymphaea tuberosa 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1463 Score = 295 bits (149), Expect = 7e-77 Identities = 181/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 932 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 991 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 992 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1051 Query: 122 tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1052 tttagttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaa 1111 Query: 181 ggagaggat 189 || |||||| Sbjct: 1112 ggtgaggat 1120
>gb|AF244557.1|AF244557 Magnolia x soulangeana 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1456 Score = 295 bits (149), Expect = 7e-77 Identities = 181/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 925 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 984 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 985 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1044 Query: 122 tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1045 tttagttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaa 1104 Query: 181 ggagaggat 189 || |||||| Sbjct: 1105 ggtgaggat 1113
>emb|V00165.1|CHNTRN1 Tobacco chloroplast genes for 16S ribosomal RNA and tRNA-Val Length = 2113 Score = 295 bits (149), Expect = 7e-77 Identities = 181/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1573 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 1632 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1633 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1692 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1693 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgttaagccggaggaa 1752 Query: 181 ggagaggat 189 || |||||| Sbjct: 1753 ggtgaggat 1761
>gb|AY168732.2| Angiosperm environmental sample clone Hot Creek 1 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1451 Score = 295 bits (149), Expect = 7e-77 Identities = 181/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 511 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 452 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 451 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 392 Query: 122 tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 391 tttagttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaa 332 Query: 181 ggagaggat 189 || |||||| Sbjct: 331 ggtgaggat 323
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 289 bits (146), Expect = 5e-75 Identities = 178/186 (95%), Gaps = 2/186 (1%) Strand = Plus / Minus Query: 6 gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 137929 gaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggctgt 137870 Query: 65 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 137869 cgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgttt 137810 Query: 125 agttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183 ||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 137809 agttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaaggt 137750 Query: 184 gaggat 189 |||||| Sbjct: 137749 gaggat 137744 Score = 289 bits (146), Expect = 5e-75 Identities = 178/186 (95%), Gaps = 2/186 (1%) Strand = Plus / Plus Query: 6 gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 102353 gaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggctgt 102412 Query: 65 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 102413 cgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgttt 102472 Query: 125 agttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183 ||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 102473 agttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaaggt 102532 Query: 184 gaggat 189 |||||| Sbjct: 102533 gaggat 102538
>gb|DQ013044.1| Lactuca sativa NADH dehydrogenase subunit 2 (ndhB) gene, partial cds; ribosomal protein S7 (rps7) gene, complete cds; ribosomal protein S12 (rps12) gene, partial cds; tRNA-Val, 16S ribosomal RNA, tRNA-Ile, and tRNA-Ala genes, complete sequence; 23S ribosomal RNA gene, partial sequence; and unknown gene; chloroplast Length = 8165 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5155 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 5214 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 5215 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 5274 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 5275 tttagttgccatcattgagtttggaaccctgaacagactgccggtgataagccggaggaa 5334 Query: 181 ggagaggat 189 || |||||| Sbjct: 5335 ggtgaggat 5343
>gb|BT014415.1| Lycopersicon esculentum clone 133723R, mRNA sequence Length = 1449 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1070 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 1129 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1130 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1189 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1190 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 1249 Query: 181 ggagaggat 189 || |||||| Sbjct: 1250 ggtgaggat 1258
>gb|AY563527.1| Camellia sinensis 16S ribosomal RNA gene, partial sequence Length = 699 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 264 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 323 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 324 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 383 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 384 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 443 Query: 181 ggagaggat 189 || |||||| Sbjct: 444 ggtgaggat 452
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 135733 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 135674 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135673 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 135614 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 135613 tttagttgccatcattgagtttggaaccctgaacagactgccggtgataagccggaggaa 135554 Query: 181 ggagaggat 189 || |||||| Sbjct: 135553 ggtgaggat 135545 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 101145 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 101204 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 101205 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 101264 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 101265 tttagttgccatcattgagtttggaaccctgaacagactgccggtgataagccggaggaa 101324 Query: 181 ggagaggat 189 || |||||| Sbjct: 101325 ggtgaggat 101333
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 138920 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138861 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 138860 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138801 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 138800 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 138741 Query: 181 ggagaggat 189 || |||||| Sbjct: 138740 ggtgaggat 138732 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 103710 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 103769 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 103770 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 103829 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 103830 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 103889 Query: 181 ggagaggat 189 || |||||| Sbjct: 103890 ggtgaggat 103898
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 134463 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 134404 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 134403 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 134344 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 134343 tttagttgccatcattgagtttggaaccctgaacagactgccggtgataagccggaggaa 134284 Query: 181 ggagaggat 189 || |||||| Sbjct: 134283 ggtgaggat 134275 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 100172 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 100231 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 100232 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 100291 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 100292 tttagttgccatcattgagtttggaaccctgaacagactgccggtgataagccggaggaa 100351 Query: 181 ggagaggat 189 || |||||| Sbjct: 100352 ggtgaggat 100360
>emb|Y18934.1|CPY18934 Solanum nigrum chloroplast tRNA-Ala, tRNA-Ile, 16S rRNA, tRNA-Val, rps12, rps7, ndhB genes Length = 7829 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2613 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 2554 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2553 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 2494 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 2493 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 2434 Query: 181 ggagaggat 189 || |||||| Sbjct: 2433 ggtgaggat 2425
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 134550 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 134491 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 134490 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 134431 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 134430 tttagttgccaacgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 134371 Query: 181 ggagaggat 189 || |||||| Sbjct: 134370 ggtgaggat 134362 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 98895 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 98954 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 98955 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 99014 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 99015 tttagttgccaacgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 99074 Query: 181 ggagaggat 189 || |||||| Sbjct: 99075 ggtgaggat 99083
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 139540 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 139481 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 139480 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 139421 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 139420 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 139361 Query: 181 ggagaggat 189 || |||||| Sbjct: 139360 ggtgaggat 139352 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 104017 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 104076 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 104077 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 104136 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 104137 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 104196 Query: 181 ggagaggat 189 || |||||| Sbjct: 104197 ggtgaggat 104205
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 146378 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 146319 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 146318 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 146259 Query: 122 tttagttgccact-atgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 146258 tttagttgccaatgttgagtttggaaccctgaacagactgccggtgctaagccggaggaa 146199 Query: 181 ggagaggat 189 || |||||| Sbjct: 146198 ggcgaggat 146190 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 106950 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 107009 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 107010 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 107069 Query: 122 tttagttgccact-atgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 107070 tttagttgccaatgttgagtttggaaccctgaacagactgccggtgctaagccggaggaa 107129 Query: 181 ggagaggat 189 || |||||| Sbjct: 107130 ggcgaggat 107138
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 138282 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138223 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 138222 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138163 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 138162 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 138103 Query: 181 ggagaggat 189 || |||||| Sbjct: 138102 ggtgaggat 138094 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 102754 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 102813 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 102814 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 102873 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 102874 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 102933 Query: 181 ggagaggat 189 || |||||| Sbjct: 102934 ggtgaggat 102942
>gb|DQ401208.1| Uncultured Pseudomonas sp. clone cloMSN28 16S ribosomal RNA gene, partial sequence Length = 563 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 220 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 279 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 280 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 339 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 340 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 399 Query: 181 ggagaggat 189 || |||||| Sbjct: 400 ggtgaggat 408
>dbj|AB075086.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:KCR15 Length = 507 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 16 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 75 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 76 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 135 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 136 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 195 Query: 181 ggagaggat 189 || |||||| Sbjct: 196 ggtgaggat 204
>dbj|AB075075.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:KCR3 Length = 507 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 16 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 75 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 76 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 135 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 136 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 195 Query: 181 ggagaggat 189 || |||||| Sbjct: 196 ggtgaggat 204
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 135733 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 135674 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135673 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 135614 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 135613 tttagttgccaccgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 135554 Query: 181 ggagaggat 189 || |||||| Sbjct: 135553 ggtgaggat 135545 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 101031 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 101090 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 101091 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 101150 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 101151 tttagttgccaccgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 101210 Query: 181 ggagaggat 189 || |||||| Sbjct: 101211 ggtgaggat 101219
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 43272 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 43331 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 43332 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 43391 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 43392 tttagttgccaacgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 43451 Query: 181 ggagaggat 189 || |||||| Sbjct: 43452 ggtgaggat 43460
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 139540 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 139481 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 139480 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 139421 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 139420 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 139361 Query: 181 ggagaggat 189 || |||||| Sbjct: 139360 ggtgaggat 139352 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 102885 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 102944 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 102945 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 103004 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 103005 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 103064 Query: 181 ggagaggat 189 || |||||| Sbjct: 103065 ggtgaggat 103073
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 138418 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138359 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 138358 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138299 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 138298 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 138239 Query: 181 ggagaggat 189 || |||||| Sbjct: 138238 ggtgaggat 138230 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 102925 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 102984 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 102985 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 103044 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 103045 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 103104 Query: 181 ggagaggat 189 || |||||| Sbjct: 103105 ggtgaggat 103113
>gb|DQ211347.1| Plastid transformation vector pPRV110L, complete sequence Length = 4128 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 3752 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 3811 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 3812 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 3871 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 3872 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 3931 Query: 181 ggagaggat 189 || |||||| Sbjct: 3932 ggtgaggat 3940
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 138416 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138357 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 138356 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138297 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 138296 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 138237 Query: 181 ggagaggat 189 || |||||| Sbjct: 138236 ggtgaggat 138228 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 102922 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 102981 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 102982 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 103041 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 103042 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 103101 Query: 181 ggagaggat 189 || |||||| Sbjct: 103102 ggtgaggat 103110
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 138327 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138268 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 138267 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138208 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 138207 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 138148 Query: 181 ggagaggat 189 || |||||| Sbjct: 138147 ggtgaggat 138139 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 102801 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 102860 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 102861 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 102920 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 102921 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 102980 Query: 181 ggagaggat 189 || |||||| Sbjct: 102981 ggtgaggat 102989
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 136689 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 136630 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 136629 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 136570 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 136569 tttagttgccaccgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 136510 Query: 181 ggagaggat 189 || |||||| Sbjct: 136509 ggtgaggat 136501 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 101960 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 102019 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 102020 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 102079 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 102080 tttagttgccaccgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 102139 Query: 181 ggagaggat 189 || |||||| Sbjct: 102140 ggtgaggat 102148
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 138918 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138859 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 138858 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138799 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 138798 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 138739 Query: 181 ggagaggat 189 || |||||| Sbjct: 138738 ggtgaggat 138730 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 103708 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 103767 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 103768 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 103827 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 103828 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 103887 Query: 181 ggagaggat 189 || |||||| Sbjct: 103888 ggtgaggat 103896
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 135726 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 135667 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135666 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 135607 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 135606 tttagttgccatcattgagtttggaaccctgaacagactgccggtgataagccggaggaa 135547 Query: 181 ggagaggat 189 || |||||| Sbjct: 135546 ggtgaggat 135538 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 101143 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 101202 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 101203 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 101262 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 101263 tttagttgccatcattgagtttggaaccctgaacagactgccggtgataagccggaggaa 101322 Query: 181 ggagaggat 189 || |||||| Sbjct: 101323 ggtgaggat 101331
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 138659 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138600 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 138599 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138540 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 138539 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 138480 Query: 181 ggagaggat 189 || |||||| Sbjct: 138479 ggtgaggat 138471 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 103479 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 103538 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 103539 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 103598 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 103599 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 103658 Query: 181 ggagaggat 189 || |||||| Sbjct: 103659 ggtgaggat 103667
>emb|Y10178.1|CPAC16SR A.cepa chloroplast 16S rRNA gene Length = 678 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 204 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 263 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 tgtcgtcagcccgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 323 Query: 122 tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||||| | ||||| ||||||||||||||||| ||||||| ||||||||||||| Sbjct: 324 tttagttgccaccattgagtgtggaaccctgaacagactgccggtgataagccggaggaa 383 Query: 181 ggagaggat 189 || |||||| Sbjct: 384 ggtgaggat 392
>emb|X70938.1|CHNPTRNVI N.plumbaginifolia chloroplast 16SrDNA, trnV and trnI genes for 16S ribosomal RNA, transfer RNA-Val and transfer RNA-Ile (5'exon) Length = 3274 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2173 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 2232 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2233 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 2292 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 2293 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 2352 Query: 181 ggagaggat 189 || |||||| Sbjct: 2353 ggtgaggat 2361
>gb|U12815.1|XXU12815 Transformation vector pPRV112B, plastid targeting segment Length = 4126 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 377 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 318 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 317 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 258 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 257 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 198 Query: 181 ggagaggat 189 || |||||| Sbjct: 197 ggtgaggat 189
>gb|U12814.1|XXU12814 Transformation vector pPRV112A, plastid targeting segment Length = 4126 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 377 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 318 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 317 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 258 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 257 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 198 Query: 181 ggagaggat 189 || |||||| Sbjct: 197 ggtgaggat 189
>gb|U12813.1|XXU12813 Transformation vector pPRV111B, plastid targeting segment Length = 4174 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 377 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 318 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 317 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 258 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 257 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 198 Query: 181 ggagaggat 189 || |||||| Sbjct: 197 ggtgaggat 189
>gb|U12812.1|XXU12812 Transformation vector pPRV111A, plastid targeting segment Length = 4174 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 377 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 318 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 317 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 258 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 257 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 198 Query: 181 ggagaggat 189 || |||||| Sbjct: 197 ggtgaggat 189
>gb|U12811.1|XXU12811 Transformation vector pPRV100B, plastid targeting segment Length = 3019 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 377 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 318 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 317 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 258 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 257 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 198 Query: 181 ggagaggat 189 || |||||| Sbjct: 197 ggtgaggat 189
>gb|U12810.1|XXU12810 Transformation vector pPRV100A, plastid targeting segment Length = 3019 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 377 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 318 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 317 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 258 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 257 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 198 Query: 181 ggagaggat 189 || |||||| Sbjct: 197 ggtgaggat 189
>gb|U12809.1|XXU12809 Transformation vector pPRV1, plastid targeting seqment Length = 2962 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 377 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 318 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 317 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 258 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 257 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 198 Query: 181 ggagaggat 189 || |||||| Sbjct: 197 ggtgaggat 189
>gb|L37580.1|RCNRGD Ricinis communis 16S ribosomal RNA (16S rRNA) gene Length = 1423 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 926 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 985 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 986 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1045 Query: 122 tttagttgccact-atgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 1046 tttagttgccactgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1105 Query: 181 ggagaggat 189 || |||||| Sbjct: 1106 ggtgaggat 1114
>gb|M82900.1|TOBCP16SRD Nicotiana plumbaginifolia 16S rRNA gene Length = 1490 Score = 287 bits (145), Expect = 2e-74 Identities = 180/189 (95%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 949 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 1008 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1009 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1068 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 1128 Query: 181 ggagaggat 189 || |||||| Sbjct: 1129 ggtgaggat 1137
>gb|DQ187922.1| Uncultured phototrophic eukaryote clone 90 16S ribosomal RNA gene, partial sequence Length = 927 Score = 281 bits (142), Expect = 1e-72 Identities = 177/186 (95%), Gaps = 2/186 (1%) Strand = Plus / Plus Query: 6 gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 734 gaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggctgt 793 Query: 65 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 794 cgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgttt 853 Query: 125 agttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183 ||||||||| | |||||| |||||||||||||||| ||||||| ||||||||||||||| Sbjct: 854 agttgccaccattgagttcggaaccctgaacagactgccggtgataagccggaggaaggt 913 Query: 184 gaggat 189 |||||| Sbjct: 914 gaggat 919
>dbj|AB200661.1| uncultured bacterium gene for 16S rRNA, partial sequence, clone: G32 Length = 960 Score = 281 bits (142), Expect = 1e-72 Identities = 174/182 (95%), Gaps = 2/182 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 469 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 528 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 529 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 588 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 589 tttagttgccaccgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 648 Query: 181 gg 182 || Sbjct: 649 gg 650
>dbj|AB075082.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:KCR11 Length = 507 Score = 281 bits (142), Expect = 1e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 ||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 16 cgcgaatnctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 75 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 76 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 135 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 136 tttagttgccatcgttgagtttggaaccctgaacagactgccggtggtaagccggaggaa 195 Query: 181 ggagaggat 189 || |||||| Sbjct: 196 ggtgaggat 204
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 281 bits (142), Expect = 1e-72 Identities = 177/186 (95%), Gaps = 2/186 (1%) Strand = Plus / Minus Query: 6 gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 130803 gaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggctgt 130744 Query: 65 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124 |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 130743 cgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaacccttgtgttt 130684 Query: 125 agttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183 ||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 130683 agttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaaggt 130624 Query: 184 gaggat 189 |||||| Sbjct: 130623 gaggat 130618 Score = 281 bits (142), Expect = 1e-72 Identities = 177/186 (95%), Gaps = 2/186 (1%) Strand = Plus / Plus Query: 6 gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104119 gaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggctgt 104178 Query: 65 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124 |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 104179 cgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaacccttgtgttt 104238 Query: 125 agttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183 ||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 104239 agttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaaggt 104298 Query: 184 gaggat 189 |||||| Sbjct: 104299 gaggat 104304
>gb|L37578.1|ADQRGD Adriana glabrata 16S ribosomal RNA (16S rRNA) gene Length = 1428 Score = 281 bits (142), Expect = 1e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| | Sbjct: 920 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatgnc 979 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 980 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1039 Query: 122 tttagttgccact-atgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 1040 tttagttgccactgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1099 Query: 181 ggagaggat 189 || |||||| Sbjct: 1100 ggtgaggat 1108
>gb|AY818945.1| Plantago rugelii 16S ribosomal RNA (rrn16) gene, partial sequence; chloroplast Length = 1402 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 910 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 969 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 970 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1029 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | | ||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1030 tttagttgccatcgtttagtttggaaccctgaacagactgccggtgataagccggaggaa 1089 Query: 181 ggagaggat 189 || |||||| Sbjct: 1090 ggtgaggat 1098
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 142490 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 142431 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 142430 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 142371 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 142370 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 142311 Query: 181 ggagaggat 189 || |||||| Sbjct: 142310 ggtgaggat 142302 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 106607 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 106666 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106667 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 106726 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 106727 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 106786 Query: 181 ggagaggat 189 || |||||| Sbjct: 106787 ggtgaggat 106795
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 143319 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 143260 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 143259 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 143200 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 143199 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 143140 Query: 181 ggagaggat 189 || |||||| Sbjct: 143139 ggtgaggat 143131 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 106741 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 106800 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106801 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 106860 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 106861 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 106920 Query: 181 ggagaggat 189 || |||||| Sbjct: 106921 ggtgaggat 106929
>emb|X72584.1|CHCRTRNAV C.reflexa chloroplast genes trnA, trnI, trnV, rps7, rpS12, ndhB and 16S rDNA Length = 8807 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 2802 cgcgaatcctcttgaaagagaggggtgccttcgggaacgtggacacaggtggtgcatggc 2743 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2742 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 2683 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 2682 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 2623 Query: 181 ggagaggat 189 || |||||| Sbjct: 2622 ggtgaggat 2614
>gb|DQ129644.1| Uncultured bacterium clone AKIW961 16S ribosomal RNA gene, partial sequence Length = 1448 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 938 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 997 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 998 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1057 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 1058 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1117 Query: 181 ggagaggat 189 || |||||| Sbjct: 1118 ggtgaggat 1126
>emb|AJ639615.1| Vitis vinifera plastid partial 16S rRNA gene Length = 1486 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 954 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 1013 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1014 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1073 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 1074 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1133 Query: 181 ggagaggat 189 || |||||| Sbjct: 1134 ggtgaggat 1142
>gb|AF372579.1|AF372579 Lespedeza cuneata 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 700 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 379 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 320 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 319 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 260 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 259 tttagttgccaacgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 200 Query: 181 ggagaggat 189 || |||||| Sbjct: 199 ggtgaggat 191
>gb|AY216521.1| Lycopersicon esculentum tRNA-Val gene, complete sequence; 16S ribosomal RNA gene, complete sequence; and tRNA-Ile and tRNA-Ala genes, complete sequence; chloroplast genes for chloroplast products Length = 5206 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2562 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 2621 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2622 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 2681 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||| ||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 2682 tttagttaccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 2741 Query: 181 ggagaggat 189 || |||||| Sbjct: 2742 ggtgaggat 2750
>emb|X73670.1|CHDC16SRR D.carota chloroplast gene for tRNA-Val, 16S rRNA and tRNA-Ile (exon 1) Length = 2192 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||| Sbjct: 1246 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgaatggc 1305 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1306 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1365 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1366 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 1425 Query: 181 ggagaggat 189 || |||||| Sbjct: 1426 ggtgaggat 1434
>gb|U76911.1|CPU76911 Carica papaya 16S ribosomal RNA, chloroplast gene for chloroplast RNA, partial sequence Length = 1563 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 931 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 990 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 991 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1050 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 1051 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1110 Query: 181 ggagaggat 189 || |||||| Sbjct: 1111 ggtgaggat 1119
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 133259 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 133200 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 133199 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 133140 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 133139 tttagttgccaacgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 133080 Query: 181 ggagaggat 189 || |||||| Sbjct: 133079 ggtgaggat 133071 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 99197 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 99256 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 99257 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 99316 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 99317 tttagttgccaacgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 99376 Query: 181 ggagaggat 189 || |||||| Sbjct: 99377 ggtgaggat 99385
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 142670 cgcgaatcctcttgaaagagaggtgtgccttcgggaacgcggacacaggtggtgcatggc 142611 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 142610 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 142551 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 142550 tttagttgccaccgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 142491 Query: 181 ggagaggat 189 || |||||| Sbjct: 142490 ggtgaggat 142482 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 106629 cgcgaatcctcttgaaagagaggtgtgccttcgggaacgcggacacaggtggtgcatggc 106688 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106689 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 106748 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 106749 tttagttgccaccgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 106808 Query: 181 ggagaggat 189 || |||||| Sbjct: 106809 ggtgaggat 106817
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 138296 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138237 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 138236 tgtcttcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138177 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 138176 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 138117 Query: 181 ggagaggat 189 || |||||| Sbjct: 138116 ggtgaggat 138108 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 102766 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 102825 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 102826 tgtcttcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 102885 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 102886 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 102945 Query: 181 ggagaggat 189 || |||||| Sbjct: 102946 ggtgaggat 102954
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 50004 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 49945 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 49944 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 49885 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 49884 tttagttgccaacgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 49825 Query: 181 ggagaggat 189 || |||||| Sbjct: 49824 ggtgaggat 49816
>emb|AJ278626.1|CRE278626 Cuscuta reflexa chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2191 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 1338 cgcgaatcctcttgaaagagaggggtgccttcgggaacgtggacacaggtggtgcatggc 1397 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1398 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1457 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1458 tttagttgccatcgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 1517 Query: 181 ggagaggat 189 || |||||| Sbjct: 1518 ggtgaggat 1526
>gb|U24585.1|IMU24585 Isoetes melanopoda chloroplast 16S rRNA gene, partial sequence Length = 1452 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttga-agagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 ||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 926 cgcgaatcctcttgagagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 985 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 986 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1045 Query: 122 tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||||| | ||||||||||||||| ||||||| ||||||| ||||||||||||| Sbjct: 1046 tttagttgccaccattgagtttggaaccctaaacagactgccggtgataagccggaggaa 1105 Query: 181 ggagaggat 189 || |||||| Sbjct: 1106 ggtgaggat 1114
>gb|U03555.1|AIU03555 Alnus incana chloroplast 16S rRNA gene, complete sequence Length = 1842 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1124 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 1183 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1184 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1243 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 1244 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1303 Query: 181 ggagaggat 189 || |||||| Sbjct: 1304 ggtgaggat 1312
>gb|AY803217.1| Angiosperm environmental sample clone C82 16S ribosomal RNA gene, partial sequence; chloroplast Length = 545 Score = 274 bits (138), Expect = 3e-70 Identities = 177/188 (94%), Gaps = 4/188 (2%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 38 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 97 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 98 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 157 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||| || | ||||||||||||||||| ||||||| |||||||||||||| Sbjct: 158 tttagttgccaccat---tgtggaaccctgaacagactgccggtgataagccggaggaag 214 Query: 182 gagaggat 189 | |||||| Sbjct: 215 gtgaggat 222
>gb|AY803214.1| Angiosperm environmental sample clone B92 16S ribosomal RNA gene, partial sequence; chloroplast Length = 546 Score = 274 bits (138), Expect = 3e-70 Identities = 177/188 (94%), Gaps = 4/188 (2%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 38 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 97 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 98 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 157 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||| || | ||||||||||||||||| ||||||| |||||||||||||| Sbjct: 158 tttagttgccaccat---tgtggaaccctgaacagactgccggtgataagccggaggaag 214 Query: 182 gagaggat 189 | |||||| Sbjct: 215 gtgaggat 222
>gb|AY803212.1| Angiosperm environmental sample clone B63 16S ribosomal RNA gene, partial sequence; chloroplast Length = 546 Score = 274 bits (138), Expect = 3e-70 Identities = 177/188 (94%), Gaps = 4/188 (2%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 38 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 97 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 98 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 157 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||| || | ||||||||||||||||| ||||||| |||||||||||||| Sbjct: 158 tttagttgccaccat---tgtggaaccctgaacagactgccggtgataagccggaggaag 214 Query: 182 gagaggat 189 | |||||| Sbjct: 215 gtgaggat 222
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 274 bits (138), Expect = 3e-70 Identities = 176/186 (94%), Gaps = 2/186 (1%) Strand = Plus / Minus Query: 6 gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64 ||||||||||||| |||||| ||||| |||||||| |||||||||||||||||||||||| Sbjct: 137181 gaatcctcttgaaagagaggagtgccttcgggaacacggacacaggtggtgcatggctgt 137122 Query: 65 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 137121 cgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgttt 137062 Query: 125 agttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183 ||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 137061 agttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaaggt 137002 Query: 184 gaggat 189 |||||| Sbjct: 137001 gaggat 136996 Score = 274 bits (138), Expect = 3e-70 Identities = 176/186 (94%), Gaps = 2/186 (1%) Strand = Plus / Plus Query: 6 gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64 ||||||||||||| |||||| ||||| |||||||| |||||||||||||||||||||||| Sbjct: 100790 gaatcctcttgaaagagaggagtgccttcgggaacacggacacaggtggtgcatggctgt 100849 Query: 65 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 100850 cgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgttt 100909 Query: 125 agttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183 ||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 100910 agttgccaccattgagtttggaaccctgaacagactgccggtgataagccggaggaaggt 100969 Query: 184 gaggat 189 |||||| Sbjct: 100970 gaggat 100975
>emb|AJ428862.1|RHI428862 Unidentified cyanobacterium DBD2002 partial 16S rRNA gene Length = 757 Score = 274 bits (138), Expect = 3e-70 Identities = 180/190 (94%), Gaps = 3/190 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 244 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 303 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccc-tcgt 120 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 304 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaacccttcgt 363 Query: 121 gtttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggagga 179 |||||||||||| | ||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 364 gtttagttgccaccgttgagtttggaaccctgaacagactgccggtgataagccggagga 423 Query: 180 aggagaggat 189 ||| |||||| Sbjct: 424 aggtgaggat 433
>gb|L37579.1|EUFRGD Euphorbia pulcherrima 16S ribosomal RNA (16S rRNA) gene Length = 1420 Score = 274 bits (138), Expect = 3e-70 Identities = 177/189 (93%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| | Sbjct: 923 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatgkc 982 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 983 tgtcgtcagctcgtnccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1042 Query: 122 tttagttgccact-atgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||||| ||||||||||||||||| ||||| ||||||| ||| ||||||||| Sbjct: 1043 tttagttgccactgttgagtttggaaccctgagcagactgccggtgataarccggaggaa 1102 Query: 181 ggagaggat 189 || |||||| Sbjct: 1103 ggtgaggat 1111
>emb|AJ440719.1|OIN440719 Putative agent of rhinosporidiosis partial 16S rRNA gene Length = 1458 Score = 274 bits (138), Expect = 3e-70 Identities = 180/190 (94%), Gaps = 3/190 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 945 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 1004 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccc-tcgt 120 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1005 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaacccttcgt 1064 Query: 121 gtttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggagga 179 |||||||||||| | ||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1065 gtttagttgccaccgttgagtttggaaccctgaacagactgccggtgataagccggagga 1124 Query: 180 aggagaggat 189 ||| |||||| Sbjct: 1125 aggtgaggat 1134
>gb|AY895148.1| Chloroplast transformation vector pCLT327 Cry1Ab (cry1Ab) and AadA (aadA) genes, complete cds; tRNA-Val gene, complete sequence; and 16S ribosomal RNA, partial sequence Length = 8483 Score = 272 bits (137), Expect = 1e-69 Identities = 178/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 8110 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 8169 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 8170 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 8229 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || | ||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 8230 tttagttgccaacatttagtttggaaccctgagcagactgccggtgataagccggaggaa 8289 Query: 181 ggagaggat 189 || |||||| Sbjct: 8290 ggtgaggat 8298
>gb|AY171318.1| Uncultured bacterium clone s47 16S ribosomal RNA gene, partial sequence Length = 1039 Score = 272 bits (137), Expect = 1e-69 Identities = 178/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 632 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 691 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 692 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 751 Query: 122 tttagttgccactat-gagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | |||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 752 cttagttgccaccgtcgagtttggaaccctgagcagactgccggtgataagccggaggaa 811 Query: 181 ggagaggat 189 || |||||| Sbjct: 812 ggtgaggat 820
>gb|AY171306.1| Uncultured bacterium clone s41 16S ribosomal RNA gene, partial sequence Length = 1050 Score = 272 bits (137), Expect = 1e-69 Identities = 178/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 643 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 702 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 703 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 762 Query: 122 tttagttgccactat-gagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | |||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 763 cttagttgccaccgtcgagtttggaaccctgagcagactgccggtgataagccggaggaa 822 Query: 181 ggagaggat 189 || |||||| Sbjct: 823 ggtgaggat 831
>gb|AF263516.1|AF263516 Vitis vinifera 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 502 Score = 272 bits (137), Expect = 1e-69 Identities = 178/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 ||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 394 cgcgaatccccttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 335 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 334 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 275 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 274 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 215 Query: 181 ggagaggat 189 || |||||| Sbjct: 214 ggtgaggat 206
>gb|AY942965.1| Uncultured phototrophic eukaryote clone 39 16S ribosomal RNA gene, partial sequence; plastid Length = 964 Score = 272 bits (137), Expect = 1e-69 Identities = 178/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||| || ||||| |||||||||||||||||||||||||||||| Sbjct: 472 cgcgaatcctcttgaaagagcggagtgccttcgggaacgcggacacaggtggtgcatggc 531 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 532 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 591 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 592 tttagttgccaacgttgagtttggaaccctgaacagactgccggtgataagccggaggaa 651 Query: 181 ggagaggat 189 || |||||| Sbjct: 652 ggtgaggat 660
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 272 bits (137), Expect = 1e-69 Identities = 178/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 134844 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 134785 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 134784 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 134725 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || | ||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 134724 tttagttgccaacatttagtttggaaccctgagcagactgccggtgataagccggaggaa 134665 Query: 181 ggagaggat 189 || |||||| Sbjct: 134664 ggtgaggat 134656 Score = 272 bits (137), Expect = 1e-69 Identities = 178/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 100550 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 100609 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 100610 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 100669 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || | ||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 100670 tttagttgccaacatttagtttggaaccctgagcagactgccggtgataagccggaggaa 100729 Query: 181 ggagaggat 189 || |||||| Sbjct: 100730 ggtgaggat 100738
>gb|AY575999.1| Chloroplast transformation vector pCLT312, plastid targeting sequence Length = 4508 Score = 272 bits (137), Expect = 1e-69 Identities = 178/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4135 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 4194 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 4195 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 4254 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || | ||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 4255 tttagttgccaacatttagtttggaaccctgagcagactgccggtgataagccggaggaa 4314 Query: 181 ggagaggat 189 || |||||| Sbjct: 4315 ggtgaggat 4323
>gb|U24582.1|CGU24582 Cibotium glaucum chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 272 bits (137), Expect = 1e-69 Identities = 172/181 (95%), Gaps = 2/181 (1%) Strand = Plus / Plus Query: 4 gcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggct 62 ||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 923 gcgaatcctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggct 982 Query: 63 gtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgt 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 983 gtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgt 1042 Query: 123 ttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 ||||||||||||| | ||||||||||||| ||||||| ||||||| |||||||||||||| Sbjct: 1043 ttagttgccactactaagtttggaaccctaaacagactgccggtgataagccggaggaag 1102 Query: 182 g 182 | Sbjct: 1103 g 1103
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 268 bits (135), Expect = 2e-68 Identities = 178/190 (93%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 138730 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138671 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 138670 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138611 Query: 122 tttagttgcca--ctatgagtttggaaccctgaacagaccgccggtgttaagccggagga 179 ||||||||||| | |||| |||||||||||| ||||| ||||||| |||||||||||| Sbjct: 138610 tttagttgccaaccgttgaggttggaaccctgagcagactgccggtgataagccggagga 138551 Query: 180 aggagaggat 189 ||| |||||| Sbjct: 138550 aggtgaggat 138541 Score = 268 bits (135), Expect = 2e-68 Identities = 178/190 (93%), Gaps = 3/190 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 103179 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 103238 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 103239 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 103298 Query: 122 tttagttgcca--ctatgagtttggaaccctgaacagaccgccggtgttaagccggagga 179 ||||||||||| | |||| |||||||||||| ||||| ||||||| |||||||||||| Sbjct: 103299 tttagttgccaaccgttgaggttggaaccctgagcagactgccggtgataagccggagga 103358 Query: 180 aggagaggat 189 ||| |||||| Sbjct: 103359 aggtgaggat 103368
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 268 bits (135), Expect = 2e-68 Identities = 178/190 (93%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 139005 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 138946 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 138945 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 138886 Query: 122 tttagttgcca--ctatgagtttggaaccctgaacagaccgccggtgttaagccggagga 179 ||||||||||| | |||| |||||||||||| ||||| ||||||| |||||||||||| Sbjct: 138885 tttagttgccaaccgttgaggttggaaccctgagcagactgccggtgataagccggagga 138826 Query: 180 aggagaggat 189 ||| |||||| Sbjct: 138825 aggtgaggat 138816 Score = 268 bits (135), Expect = 2e-68 Identities = 178/190 (93%), Gaps = 3/190 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 103402 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 103461 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 103462 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 103521 Query: 122 tttagttgcca--ctatgagtttggaaccctgaacagaccgccggtgttaagccggagga 179 ||||||||||| | |||| |||||||||||| ||||| ||||||| |||||||||||| Sbjct: 103522 tttagttgccaaccgttgaggttggaaccctgagcagactgccggtgataagccggagga 103581 Query: 180 aggagaggat 189 ||| |||||| Sbjct: 103582 aggtgaggat 103591
>gb|DQ129643.1| Uncultured bacterium clone AKIW940 16S ribosomal RNA gene, partial sequence Length = 1447 Score = 266 bits (134), Expect = 7e-68 Identities = 172/182 (94%), Gaps = 2/182 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| Sbjct: 940 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcgggcacaggtggtgcatggc 999 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1000 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1059 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 1060 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1119 Query: 181 gg 182 || Sbjct: 1120 gg 1121
>gb|DQ417651.1| Lotus corniculatus 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 266 bits (134), Expect = 7e-68 Identities = 179/190 (94%), Gaps = 3/190 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 912 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 971 Query: 62 tgtcgtcagctcgtgccgtaaggtg-ttgggttaagtctcgcaacgagcgcaaccctcgt 120 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 972 tgtcgtcagctcgtgccgtaaggtgtttgggttaagtcccgcaacgagcgcaaccctcgt 1031 Query: 121 gtttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggagga 179 ||||||||||| || ||||||||||||||||| ||||| ||||||| |||||||||||| Sbjct: 1032 gtttagttgccaacgttgagtttggaaccctgagcagactgccggtgataagccggagga 1091 Query: 180 aggagaggat 189 ||| |||||| Sbjct: 1092 aggtgaggat 1101
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 266 bits (134), Expect = 7e-68 Identities = 165/174 (94%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83214 aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 83273 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcc-acta 135 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 83274 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccaacat 83333 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 83334 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 83387
>gb|AY803199.1| Angiosperm environmental sample clone A20 16S ribosomal RNA gene, partial sequence; chloroplast Length = 546 Score = 266 bits (134), Expect = 7e-68 Identities = 176/188 (93%), Gaps = 4/188 (2%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 38 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 97 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 98 tgtcgtcagctcgcgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 157 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||| || | ||||||||||||||||| ||||||| |||||||||||||| Sbjct: 158 tttagttgccaccat---tgtggaaccctgaacagactgccggtgataagccggaggaag 214 Query: 182 gagaggat 189 | |||||| Sbjct: 215 gtgaggat 222
>gb|AF244554.1|AF244554 Ginkgo biloba 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1455 Score = 266 bits (134), Expect = 7e-68 Identities = 165/174 (94%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 945 aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 1004 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1005 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccatcat 1064 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 1065 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 1118
>emb|AJ867671.1| Uncultured bacterium partial 16S rRNA gene, clone RS 8-Bact43 Length = 1489 Score = 266 bits (134), Expect = 7e-68 Identities = 165/174 (94%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 983 aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 1042 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1043 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccagcat 1102 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 1103 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 1156
>emb|AJ867651.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact33 Length = 1476 Score = 266 bits (134), Expect = 7e-68 Identities = 165/174 (94%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 970 aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 1029 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1030 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccagcat 1089 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 1090 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 1143
>emb|AJ867650.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact24 Length = 1440 Score = 266 bits (134), Expect = 7e-68 Identities = 165/174 (94%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 934 aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 993 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 994 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccagcat 1053 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 1054 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 1107
>emb|AJ867649.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact22 Length = 1416 Score = 266 bits (134), Expect = 7e-68 Identities = 165/174 (94%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1050 aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 1109 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1110 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccagcat 1169 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 1170 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 1223
>gb|U24594.1|OCU24594 Osmunda cinnamomea var. fokiensis chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 266 bits (134), Expect = 7e-68 Identities = 172/182 (94%), Gaps = 2/182 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttga-agagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||| |||| ||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 922 cgcgaatccttttgagagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 981 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 982 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1041 Query: 122 tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| || ||||||||||||||| ||||||| ||||||| ||||||||||||| Sbjct: 1042 tttagttgccattattgagtttggaaccctaaacagactgccggtgataagccggaggaa 1101 Query: 181 gg 182 || Sbjct: 1102 gg 1103
>gb|AF526941.1| Uncultured angiosperm clone T5-20 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1497 Score = 264 bits (133), Expect = 3e-67 Identities = 178/189 (94%), Gaps = 3/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 559 cgcgaatcctcttgaaagagaggggtgct-tcgggaacgcggacacaggtggtgcatggc 501 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 500 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 441 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 440 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 381 Query: 181 ggagaggat 189 || |||||| Sbjct: 380 ggtgaggat 372
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 264 bits (133), Expect = 3e-67 Identities = 177/189 (93%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 1495 cgcgaatcctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 1554 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 1555 tgtcgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1614 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || | ||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1615 tttagttgccaacgtttagtttggaaccctgaacagactgccggtgataagccggaggaa 1674 Query: 181 ggagaggat 189 || |||||| Sbjct: 1675 ggtgaggat 1683
>gb|DQ129642.1| Uncultured bacterium clone AKIW415 16S ribosomal RNA gene, partial sequence Length = 1449 Score = 264 bits (133), Expect = 3e-67 Identities = 177/189 (93%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| | |||| ||||| |||||||||||||||||||||||||||||| Sbjct: 939 cgcgaatcctcttgaaagggaggagtgccttcgggaacgcggacacaggtggtgcatggc 998 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 999 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1058 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 1059 tttagttgccaacgttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1118 Query: 181 ggagaggat 189 || |||||| Sbjct: 1119 ggtgaggat 1127
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 264 bits (133), Expect = 3e-67 Identities = 177/189 (93%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 ||||||| |||||||| |||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 926 cgcgaattctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 985 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 986 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1045 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||| ||||||| ||||||| ||||||||||||| Sbjct: 1046 tttagttgccatcattgagtttggaaccctaaacagactgccggtgataagccggaggaa 1105 Query: 181 ggagaggat 189 || |||||| Sbjct: 1106 ggtgaggat 1114
>gb|AF372517.1|AF372517 Medicago sativa 16S ribosomal RNA gene, partial sequence; and tRNA-Ile and tRNA-Ala genes, complete sequence; chloroplast genes for chloroplast products Length = 2703 Score = 264 bits (133), Expect = 3e-67 Identities = 177/189 (93%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 134 cgcgaatcctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 193 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 194 tgtcgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 253 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || | ||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 254 tttagttgccaacgtttagtttggaaccctgaacagactgccggtgataagccggaggaa 313 Query: 181 ggagaggat 189 || |||||| Sbjct: 314 ggtgaggat 322
>gb|AY855838.1| Maytenus hookeri 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1452 Score = 264 bits (133), Expect = 3e-67 Identities = 177/189 (93%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 939 cgcgaatcctcttgaaagaagggggtgccttcgggaacgcggacacaggtggtgcatggc 998 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 999 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1058 Query: 122 tttagttgccac-tatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 1059 tttagttgccacagttgagtttggaaccctgagcagactgccggtgataagccggaggaa 1118 Query: 181 ggagaggat 189 || |||||| Sbjct: 1119 ggtgaggat 1127
>gb|AF244558.1|AF244558 Megaceros aenigmaticus 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1487 Score = 264 bits (133), Expect = 3e-67 Identities = 177/189 (93%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 ||||||| |||||||| |||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 951 cgcgaattctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 1010 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1011 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1070 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||| ||||||| ||||||| ||||||||||||| Sbjct: 1071 tttagttgccatcactgagtttggaaccctaaacagactgccggtgataagccggaggaa 1130 Query: 181 ggagaggat 189 || |||||| Sbjct: 1131 ggtgaggat 1139
>gb|AF244551.1|AF244551 Cycas revoluta 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1469 Score = 264 bits (133), Expect = 3e-67 Identities = 178/189 (94%), Gaps = 3/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||| Sbjct: 937 cgcgaatcctcttgaaagagaggagtgct-tcgggaacgcggacacaggtggtgcatggc 995 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 996 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1055 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1056 tttagttgccatcattgagtttggaaccctgaacagactgccggtgataagccggaggaa 1115 Query: 181 ggagaggat 189 || |||||| Sbjct: 1116 ggtgaggat 1124
>gb|DQ323045.1| Phaseolus vulgaris clone BAC-71F18, complete sequence Length = 157468 Score = 264 bits (133), Expect = 3e-67 Identities = 177/189 (93%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4391 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 4332 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 4331 tgtcgtcagctcgtgccgtaaggtgttgggttaggtcccgcaacgagcgcaaccctcgtg 4272 Query: 122 tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||||||||||| || | || ||||||||||||| Sbjct: 4271 tttagttgccaagattgagtttggaaccctgaacagactgctgatgataagccggaggaa 4212 Query: 181 ggagaggat 189 || |||||| Sbjct: 4211 ggtgaggat 4203
>dbj|AB087477.1| Anthoceros formosae chloroplast 16S rRNA, complete sequence Length = 1614 Score = 264 bits (133), Expect = 3e-67 Identities = 177/189 (93%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 ||||||| |||||||| |||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 965 cgcgaattctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 1024 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1025 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1084 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||| ||||||| ||||||| ||||||||||||| Sbjct: 1085 tttagttgccatcattgagtttggaaccctaaacagactgccggtgataagccggaggaa 1144 Query: 181 ggagaggat 189 || |||||| Sbjct: 1145 ggtgaggat 1153
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 264 bits (133), Expect = 3e-67 Identities = 177/189 (93%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 82506 cgcgaatcctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 82447 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 82446 tgtcgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 82387 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || | ||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 82386 tttagttgccaacgtttagtttggaaccctgaacagactgccggtgataagccggaggaa 82327 Query: 181 ggagaggat 189 || |||||| Sbjct: 82326 ggtgaggat 82318
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 264 bits (133), Expect = 3e-67 Identities = 177/189 (93%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 ||||||| |||||||| |||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 154209 cgcgaattctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 154150 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 154149 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 154090 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||| ||||||| ||||||| ||||||||||||| Sbjct: 154089 tttagttgccatcattgagtttggaaccctaaacagactgccggtgataagccggaggaa 154030 Query: 181 ggagaggat 189 || |||||| Sbjct: 154029 ggtgaggat 154021 Score = 264 bits (133), Expect = 3e-67 Identities = 177/189 (93%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 ||||||| |||||||| |||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 114457 cgcgaattctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggc 114516 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 114517 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 114576 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||| ||||||| ||||||| ||||||||||||| Sbjct: 114577 tttagttgccatcattgagtttggaaccctaaacagactgccggtgataagccggaggaa 114636 Query: 181 ggagaggat 189 || |||||| Sbjct: 114637 ggtgaggat 114645
>gb|DQ201846.1| Stevia rebaudiana 16S ribosomal RNA gene, partial sequence; plastid Length = 692 Score = 260 bits (131), Expect = 4e-66 Identities = 159/167 (95%), Gaps = 1/167 (0%) Strand = Plus / Plus Query: 24 gggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaag 83 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 282 gggtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaag 341 Query: 84 gtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-ctatgagttt 142 ||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 342 gtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccatcgttgagttt 401 Query: 143 ggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 |||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 402 ggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 448
>gb|DQ416274.1| Uncultured bacterium clone s3ub39 16S ribosomal RNA gene, partial sequence Length = 662 Score = 258 bits (130), Expect = 2e-65 Identities = 164/174 (94%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 283 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 284 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccagcat 343 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 | ||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 344 ttagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 397
>emb|AJ867655.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact67 Length = 1453 Score = 258 bits (130), Expect = 2e-65 Identities = 164/174 (94%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 936 aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcggctcgtg 995 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 996 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccagcat 1055 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 1056 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 1109
>emb|AJ867652.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact35 Length = 1441 Score = 258 bits (130), Expect = 2e-65 Identities = 164/174 (94%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 935 aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 994 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 995 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccagcat 1054 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||||||||||||||||||| ||||||| || |||||||||||| |||||| Sbjct: 1055 tgagtttggaaccctgaacagactgccggtgataggccggaggaaggtgaggat 1108
>emb|AJ867648.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact02 Length = 1503 Score = 258 bits (130), Expect = 2e-65 Identities = 164/174 (94%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 985 aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 1044 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcc-acta 135 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1045 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccggcat 1104 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 1105 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 1158
>gb|U24580.1|AEU24580 Angiopteris evecta chloroplast 16S rRNA gene, partial sequence Length = 1447 Score = 258 bits (130), Expect = 2e-65 Identities = 164/174 (94%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 936 aagagaggagtgccttcgggaacgcggatacaggtggtgcatggctgtcgtcagctcgtg 995 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta- 135 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 996 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccattat 1055 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||||||||||| ||||||| ||||||| ||||||||||||||| |||||| Sbjct: 1056 tgagtttggaaccctaaacagactgccggtgataagccggaggaaggtgaggat 1109
>gb|AY145653.1| Uncultured eukaryote FL12D05 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 695 Score = 258 bits (130), Expect = 2e-65 Identities = 164/174 (94%), Gaps = 1/174 (0%) Strand = Plus / Minus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 495 aagagaggagtgccttcgggaacacggacacaggtggtgcatggctgtcgtcagctcgtg 436 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 435 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccagcat 376 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 375 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 322
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 258 bits (130), Expect = 2e-65 Identities = 164/174 (94%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85303 aagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 85362 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 85363 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccagcat 85422 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 | ||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 85423 ttagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 85476
>emb|X07675.1|CHGMX Soybean plastid DNA for rps12, rps7, 16S rRNA, tRNA-Val, NADH dehydrogenase and ORF 143 Length = 5680 Score = 256 bits (129), Expect = 6e-65 Identities = 177/189 (93%), Gaps = 3/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 540 cgcgaatcctcttgaaagagaggggtgct-tcgggaacgcggacacaggtggtgcatggc 482 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 481 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 422 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || | ||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 421 tttagttgccaacatttagtttggaaccctgagcagactgccggtgataagccggaggaa 362 Query: 181 ggagaggat 189 || |||||| Sbjct: 361 ggtgaggat 353
>gb|DQ417653.1| Trifolium repens 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 256 bits (129), Expect = 6e-65 Identities = 176/189 (93%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| | |||| ||||| |||||||||||||||||||||||||||||| Sbjct: 914 cgcgaatcctcttgaaagggaggagtgccttcgggaacgcggacacaggtggtgcatggc 973 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 974 tgtcgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1033 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || | ||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1034 tttagttgccaacgtttagtttggaaccctgaacagactgccggtgataagccggaggaa 1093 Query: 181 ggagaggat 189 || |||||| Sbjct: 1094 ggtgaggat 1102
>gb|AF244561.1|AF244561 Phaeoceros laevis 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1487 Score = 256 bits (129), Expect = 6e-65 Identities = 176/189 (93%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 ||||||| |||||||| |||||| ||||| |||||| ||||||||||||||||||||||| Sbjct: 951 cgcgaattctcttgaaagagaggagtgccttcgggagcgcggacacaggtggtgcatggc 1010 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1011 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1070 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||||||||||||||| ||||||| ||||||| ||||||||||||| Sbjct: 1071 tttagttgccatcattgagtttggaaccctaaacagactgccggtgataagccggaggaa 1130 Query: 181 ggagaggat 189 || |||||| Sbjct: 1131 ggtgaggat 1139
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 256 bits (129), Expect = 6e-65 Identities = 176/189 (93%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||| ||| | |||||||||||||||||||||||||||||| Sbjct: 26430 cgcgaatcctcttgaaagagaggagtgtcttcgggaacgcggacacaggtggtgcatggc 26371 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 26370 tgtcgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 26311 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || | ||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 26310 tttagttgccaacgtttagtttggaaccctgaacagactgccggtgataagccggaggaa 26251 Query: 181 ggagaggat 189 || |||||| Sbjct: 26250 ggtgaggat 26242
>gb|AF393613.1| Sphagnum rubellum small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1467 Score = 256 bits (129), Expect = 6e-65 Identities = 176/189 (93%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||| ||||||| |||| | |||||||||||||||||||||||||||||||||||| Sbjct: 925 cgcgaatcttcttgaaagagaagagtgccctcgggaacgcggacacaggtggtgcatggc 984 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 985 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1044 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | | ||||||||||||| ||||||| ||||||| ||||||||||||| Sbjct: 1045 tttagttgccatcatttagtttggaaccctaaacagactgccggtgataagccggaggaa 1104 Query: 181 ggagaggat 189 || |||||| Sbjct: 1105 ggtgaggat 1113
>emb|X06428.1|CHGMV16S Soybean chloroplast DNA for tRNA-Val and 16S rRNA Length = 2000 Score = 256 bits (129), Expect = 6e-65 Identities = 177/189 (93%), Gaps = 3/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1461 cgcgaatcctcttgaaagagaggggtgct-tcgggaacgcggacacaggtggtgcatggc 1519 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1520 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1579 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || | ||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct: 1580 tttagttgccaacatttagtttggaaccctgagcagactgccggtgataagccggaggaa 1639 Query: 181 ggagaggat 189 || |||||| Sbjct: 1640 ggtgaggat 1648
>gb|U24592.1|SPU24592 Sphagnum palustre chloroplast 16S rRNA gene, partial sequence Length = 1435 Score = 256 bits (129), Expect = 6e-65 Identities = 176/189 (93%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||| ||||||| |||| | |||||||||||||||||||||||||||||||||||| Sbjct: 921 cgcgaatcttcttgaaagagaagagtgccctcgggaacgcggacacaggtggtgcatggc 980 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 981 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1040 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | | ||||||||||||| ||||||| ||||||| ||||||||||||| Sbjct: 1041 tttagttgccatcatttagtttggaaccctaaacagactgccggtgataagccggaggaa 1100 Query: 181 ggagaggat 189 || |||||| Sbjct: 1101 ggtgaggat 1109
>emb|AJ007728.1|OMI007728 Orobanche minor chloroplast trnV(GAC) gene, 16S rRNA gene, trnI(GAU) pseudogene, trnA(UGC) pseudogene and partial 23S rRNA gene Length = 2604 Score = 252 bits (127), Expect = 1e-63 Identities = 174/188 (92%), Gaps = 5/188 (2%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1299 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 1358 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 1359 tgtcgtcagctcgtgccgtcaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1418 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 ||||||||||| |||||||||||||||||||| || |||| |||||||||||||| Sbjct: 1419 tttagttgcca----tcgtttggaaccctgaacagactgctggtgataagccggaggaag 1474 Query: 182 gagaggat 189 | |||||| Sbjct: 1475 gtgaggat 1482
>gb|U24589.1|OEU24589 Ophioglossum engelmannii chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 252 bits (127), Expect = 1e-63 Identities = 168/179 (93%), Gaps = 2/179 (1%) Strand = Plus / Plus Query: 6 gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64 ||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 925 gaatcctcttgaaagaggggagtgccctcgggaacgcggacacaggtggtgcatggctgt 984 Query: 65 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124 |||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 985 cgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaacccccgtgttt 1044 Query: 125 agttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaagg 182 |||||||| || | ||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 1045 agttgccattattcagtttggaaccctgaacagactgccggtgataagccggaggaagg 1103
>emb|AJ867654.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact63 Length = 1442 Score = 250 bits (126), Expect = 4e-63 Identities = 163/174 (93%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 937 aagaggggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 996 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcc-acta 135 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 997 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccggcat 1056 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 1057 tgagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 1110
>gb|AF143264.1| Vitis vinifera 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 493 Score = 248 bits (125), Expect = 2e-62 Identities = 167/177 (94%), Gaps = 3/177 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 389 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 330 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 329 tgtcgtcagctcgtgccgtaa-gtgttgggttaagtcccgcaacgagcgcaaccctcgtg 271 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggag 177 ||||||||||| | ||||||||||||||||| ||||| ||||||| |||||||||| Sbjct: 270 tttagttgccaccgttgagtttggaaccctgagcagactgccggtgataagccggag 214
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 248 bits (125), Expect = 2e-62 Identities = 175/189 (92%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||| ||||| || ||| ||||| |||||||||||||||||||||||||||||| Sbjct: 120795 cgcgaatccttttgaaagaaaggagtgccttcgggaacgcggacacaggtggtgcatggc 120736 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 120735 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 120676 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | | ||||||||||||| ||||||| ||||||| ||||||||||||| Sbjct: 120675 tttagttgccatcatttagtttggaaccctaaacagactgccggtgataagccggaggaa 120616 Query: 181 ggagaggat 189 || |||||| Sbjct: 120615 ggtgaggat 120607 Score = 248 bits (125), Expect = 2e-62 Identities = 175/189 (92%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||| ||||| || ||| ||||| |||||||||||||||||||||||||||||| Sbjct: 87307 cgcgaatccttttgaaagaaaggagtgccttcgggaacgcggacacaggtggtgcatggc 87366 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 87367 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 87426 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | | ||||||||||||| ||||||| ||||||| ||||||||||||| Sbjct: 87427 tttagttgccatcatttagtttggaaccctaaacagactgccggtgataagccggaggaa 87486 Query: 181 ggagaggat 189 || |||||| Sbjct: 87487 ggtgaggat 87495
>emb|Z81323.1|PAA16SRRN P.aquilinum chloroplast 16S rRNA gene Length = 1372 Score = 248 bits (125), Expect = 2e-62 Identities = 169/181 (93%), Gaps = 2/181 (1%) Strand = Plus / Plus Query: 4 gcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggct 62 ||||||||| ||||| |||||| ||||| |||||||||| |||||||||||||||||||| Sbjct: 899 gcgaatccttttgaaagagaggagtgccttcgggaacgcagacacaggtggtgcatggct 958 Query: 63 gtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgt 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 959 gtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaacccccgtgt 1018 Query: 123 ttagttgccactat-gagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||||||| ||||||||||||| ||||||| ||||||| |||||||||||||| Sbjct: 1019 ttagttgccactatcaagtttggaaccctaaacagactgccggtgataagccggaggaag 1078 Query: 182 g 182 | Sbjct: 1079 g 1079
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 242 bits (122), Expect = 1e-60 Identities = 162/174 (93%), Gaps = 1/174 (0%) Strand = Plus / Minus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150516 aagagaggagtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 150457 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 150456 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccatcac 150397 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 | ||||||||| ||||| |||| ||||||| ||||||||||||||| |||||| Sbjct: 150396 taggtttggaactctgaatagactgccggtgataagccggaggaaggtgaggat 150343 Score = 242 bits (122), Expect = 1e-60 Identities = 162/174 (93%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107946 aagagaggagtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 108005 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 108006 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccatcac 108065 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 | ||||||||| ||||| |||| ||||||| ||||||||||||||| |||||| Sbjct: 108066 taggtttggaactctgaatagactgccggtgataagccggaggaaggtgaggat 108119
>gb|AF244563.1|AF244563 Polytrichum commune 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1486 Score = 242 bits (122), Expect = 1e-60 Identities = 162/174 (93%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 965 aagagaagagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 1024 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1025 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccatcat 1084 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 | ||||||||||||| ||||||| ||||||| ||||||||||||||| |||||| Sbjct: 1085 ttagtttggaaccctaaacagactgccggtgataagccggaggaaggtgaggat 1138
>gb|AF244556.1|AF244556 Huperzia lucidula 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1458 Score = 242 bits (122), Expect = 1e-60 Identities = 162/174 (93%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 939 aagagaggagtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 998 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 999 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccatcac 1058 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 | ||||||||| ||||| |||| ||||||| ||||||||||||||| |||||| Sbjct: 1059 taggtttggaactctgaatagactgccggtgataagccggaggaaggtgaggat 1112
>gb|AF393607.1| Pellia neesiana small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1468 Score = 242 bits (122), Expect = 1e-60 Identities = 162/174 (93%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 941 aagagaagagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 1000 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccactat 136 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| || Sbjct: 1001 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcttgtttagttgccatcat 1060 Query: 137 -gagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||| |||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 1061 cgagcttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 1114
>gb|AF393588.1| Climacium dendroides small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1468 Score = 242 bits (122), Expect = 1e-60 Identities = 162/174 (93%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 941 aagaaaggagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 1000 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-cta 135 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1001 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccatcat 1060 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 | ||||||||||||| ||||||| ||||||| ||||||||||||||| |||||| Sbjct: 1061 ttagtttggaaccctaaacagactgccggtgataagccggaggaaggtgaggat 1114
>gb|AF152609.1|AF152609 Pellia neesiana 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 691 Score = 242 bits (122), Expect = 1e-60 Identities = 162/174 (93%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 aagagaagagtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 272 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccactat 136 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| || Sbjct: 273 ccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcttgtttagttgccatcat 332 Query: 137 -gagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||| |||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 333 cgagcttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 386
>gb|U24593.1|EAU24593 Equisetum arvense chloroplast 16S rRNA gene, partial sequence Length = 1443 Score = 242 bits (122), Expect = 1e-60 Identities = 150/158 (94%), Gaps = 1/158 (0%) Strand = Plus / Plus Query: 33 cgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggt 92 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 949 cgggagcgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggt 1008 Query: 93 taagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttggaaccctg 151 |||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 1009 taagtcccgcaacgagcgcaaccctcgtgtttagttgccattattgagtttggaacccta 1068 Query: 152 aacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||| ||||||| ||||||||||||||| |||||| Sbjct: 1069 aacagactgccggtgataagccggaggaaggtgaggat 1106
>gb|DQ417652.1| Glechoma hederacea 16S ribosomal RNA gene, partial sequence; plastid Length = 1403 Score = 240 bits (121), Expect = 4e-60 Identities = 174/189 (92%), Gaps = 7/189 (3%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 912 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 971 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 972 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgag-----ccctcgtg 1026 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | ||| ||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1027 tttagttgccatcgttgaatttggaaccctgaacagactgccggtgataagccggaggaa 1086 Query: 181 ggagaggat 189 || |||||| Sbjct: 1087 ggtgaggat 1095
>gb|AF058678.1|AF058678 Takakia lepidozioides small subunit ribosomal RNA gene, chloroplast gene for chloroplast RNA, partial sequence Length = 1430 Score = 236 bits (119), Expect = 6e-59 Identities = 150/159 (94%), Gaps = 1/159 (0%) Strand = Plus / Plus Query: 32 tcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttggg 91 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 950 tcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttggg 1009 Query: 92 ttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-ctatgagtttggaaccct 150 ||||||| ||||||||||||||||||||||||||||||||| | | ||||||||||||| Sbjct: 1010 ttaagtcccgcaacgagcgcaaccctcgtgtttagttgccatcatttagtttggaaccct 1069 Query: 151 gaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||| ||||||| ||||||||||||||| |||||| Sbjct: 1070 aaacagactgccggtgataagccggaggaaggtgaggat 1108
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 236 bits (119), Expect = 6e-59 Identities = 150/159 (94%), Gaps = 1/159 (0%) Strand = Plus / Minus Query: 32 tcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttggg 91 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 131213 tcgggaacgcagacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttagg 131154 Query: 92 ttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttggaaccct 150 ||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 131153 ttaagtcccgcaacgagcgcaaccctcgtgtttagttgccattactgagtttggaaccct 131094 Query: 151 gaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||| ||||||| ||||||||||||||| |||||| Sbjct: 131093 aaacagactgccggtgataagccggaggaaggtgaggat 131055 Score = 236 bits (119), Expect = 6e-59 Identities = 150/159 (94%), Gaps = 1/159 (0%) Strand = Plus / Plus Query: 32 tcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttggg 91 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 92234 tcgggaacgcagacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttagg 92293 Query: 92 ttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttggaaccct 150 ||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 92294 ttaagtcccgcaacgagcgcaaccctcgtgtttagttgccattactgagtttggaaccct 92353 Query: 151 gaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||| ||||||| ||||||||||||||| |||||| Sbjct: 92354 aaacagactgccggtgataagccggaggaaggtgaggat 92392
>gb|U24590.1|PNU24590 Psilotum nudum chloroplast 16S rRNA gene, partial sequence Length = 1452 Score = 236 bits (119), Expect = 6e-59 Identities = 150/159 (94%), Gaps = 1/159 (0%) Strand = Plus / Plus Query: 32 tcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttggg 91 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 956 tcgggaacgcagacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttagg 1015 Query: 92 ttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttggaaccct 150 ||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 1016 ttaagtcccgcaacgagcgcaaccctcgtgtttagttgccattactgagtttggaaccct 1075 Query: 151 gaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||| ||||||| ||||||||||||||| |||||| Sbjct: 1076 aaacagactgccggtgataagccggaggaaggtgaggat 1114
>gb|U24581.1|BBU24581 Botrychium biternatum chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 236 bits (119), Expect = 6e-59 Identities = 166/179 (92%), Gaps = 2/179 (1%) Strand = Plus / Plus Query: 6 gaatcctcttga-agagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64 |||||||||||| |||| || ||||| ||||||||||||||||||||||||||||||||| Sbjct: 925 gaatcctcttgagagaggggagtgccttcgggaacgcggacacaggtggtgcatggctgt 984 Query: 65 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124 |||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 985 cgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaacccccgtgttt 1044 Query: 125 agttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaagg 182 |||||||| || | ||||||||||||| ||||||| ||||||| ||||||||||||||| Sbjct: 1045 agttgccattattcagtttggaaccctaaacagactgccggtgataagccggaggaagg 1103
>emb|AJ401354.1|CEU401354 Cuscuta europaea chloroplast 16S rRNA gene Length = 1894 Score = 236 bits (119), Expect = 6e-59 Identities = 172/187 (91%), Gaps = 2/187 (1%) Strand = Plus / Plus Query: 5 cgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctg 63 |||||||||||||| |||||||||||| | ||||||| || ||||||||||||||||||| Sbjct: 1146 cgaatcctcttgaaagagaggggtgccttagggaacgtgggcacaggtggtgcatggctg 1205 Query: 64 tcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtt 123 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1206 tcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtt 1265 Query: 124 tagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaagg 182 ||||||||| | | |||||||||||| ||||||| ||||||| ||||||||||||||| Sbjct: 1266 tagttgccatcattttgtttggaaccctaaacagactgccggtgataagccggaggaagg 1325 Query: 183 agaggat 189 |||||| Sbjct: 1326 tgaggat 1332
>gb|U24587.1|LDU24587 Lycopodium digitatum chloroplast 16S rRNA gene, partial sequence Length = 1456 Score = 234 bits (118), Expect = 2e-58 Identities = 171/186 (91%), Gaps = 2/186 (1%) Strand = Plus / Plus Query: 6 gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64 ||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 944 gaatcctcttgaaagagaggagtgccttcgggaacgcggacacaggtggtgcatggctgt 1003 Query: 65 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1004 cgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgttc 1063 Query: 125 agttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183 |||||||| | | ||||||||| ||||| |||| ||||||| ||||||||||||||| Sbjct: 1064 agttgccatcactaggtttggaactctgaatagactgccggtgataagccggaggaaggt 1123 Query: 184 gaggat 189 |||||| Sbjct: 1124 gaggat 1129
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 232 bits (117), Expect = 9e-58 Identities = 154/165 (93%), Gaps = 1/165 (0%) Strand = Plus / Minus Query: 26 gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119033 gtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 118974 Query: 86 gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-ctatgagtttgg 144 ||||||||||||| ||||||||||||||||||| ||||||||||||| | | ||||||| Sbjct: 118973 gttgggttaagtcccgcaacgagcgcaaccctcttgtttagttgccatcattaagtttgg 118914 Query: 145 aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 |||||| ||||||| ||||||| ||||||||||||||| |||||| Sbjct: 118913 aaccctaaacagactgccggtgataagccggaggaaggtgaggat 118869 Score = 232 bits (117), Expect = 9e-58 Identities = 154/165 (93%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 26 gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83087 gtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 83146 Query: 86 gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-ctatgagtttgg 144 ||||||||||||| ||||||||||||||||||| ||||||||||||| | | ||||||| Sbjct: 83147 gttgggttaagtcccgcaacgagcgcaaccctcttgtttagttgccatcattaagtttgg 83206 Query: 145 aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 |||||| ||||||| ||||||| ||||||||||||||| |||||| Sbjct: 83207 aaccctaaacagactgccggtgataagccggaggaaggtgaggat 83251
>gb|U47845.1|CRU47845 Cytinus ruber 16S ribosomal RNA gene, chloroplast gene for chloroplast RNA, partial sequence Length = 1418 Score = 232 bits (117), Expect = 9e-58 Identities = 173/189 (91%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 ||||||| |||||||| |||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 914 cgcgaatactcttgaaagagaggagtgccctagggaacgcggacacaggtggtgcatggc 973 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 974 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccataacgagcgcaaccctcgtg 1033 Query: 122 tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| || | |||||||||| || |||| || |||||||||||| |||||||| Sbjct: 1034 tttagttgccaatacttagtttggaactctaaacatactgccggtgttaagtcggaggaa 1093 Query: 181 ggagaggat 189 || |||||| Sbjct: 1094 ggtgaggat 1102
>emb|AJ278625.1|CSU278625 Cuscuta subinclusa chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2452 Score = 232 bits (117), Expect = 9e-58 Identities = 174/189 (92%), Gaps = 3/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||| Sbjct: 1650 cgcgaatcctcttgaaagggaggggtgct-tcgggaacgcggacacaggtggtgcatggc 1708 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| || Sbjct: 1709 tgtcgtcagctcgtgccgtaaggtgttgggttcagtcccgcaacgagcgcaaccctcttg 1768 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | | |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1769 tttagttgccatcgtttcgtttggaaccctgaacagactgccggtgataagccggaggaa 1828 Query: 181 ggagaggat 189 || |||||| Sbjct: 1829 ggtgaggat 1837
>emb|AJ278624.1|COD278624 Cuscuta odorata chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2231 Score = 232 bits (117), Expect = 9e-58 Identities = 174/189 (92%), Gaps = 3/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||| Sbjct: 1525 cgcgaatcctcttgaaagggaggggtgct-tcgggaacgcggacacaggtggtgcatggc 1583 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| || Sbjct: 1584 tgtcgtcagctcgtgccgtaaggtgttgggttcagtcccgcaacgagcgcaaccctcttg 1643 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | | |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1644 tttagttgccatcgtttcgtttggaaccctgaacagactgccggtgataagccggaggaa 1703 Query: 181 ggagaggat 189 || |||||| Sbjct: 1704 ggtgaggat 1712
>emb|AJ278623.1|CGR278623 Cuscuta gronovii chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2291 Score = 232 bits (117), Expect = 9e-58 Identities = 174/189 (92%), Gaps = 3/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||| Sbjct: 1573 cgcgaatcctcttgaaagggaggggtgct-tcgggaacgcggacacaggtggtgcatggc 1631 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 1632 tgtcgtcagctcgtgccgtaaggtgttgggttcagtcccgcaacgagcgcaaccctcgtg 1691 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 || |||||||| | | |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1692 ttaagttgccatcgtttcgtttggaaccctgaacagactgccggtgataagccggaggaa 1751 Query: 181 ggagaggat 189 || |||||| Sbjct: 1752 ggtgaggat 1760
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 232 bits (117), Expect = 9e-58 Identities = 174/189 (92%), Gaps = 3/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||| ||||| ||||||| ||| |||||||||||||||||| Sbjct: 1689 cgcgaatcctcttgaaagagaggagtgccttcgggaatgcg-acacaggtggtgcatggc 1747 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 1748 tgtcgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1807 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || | |||||||||| |||||||||| ||||||| ||||||||||||| Sbjct: 1808 tttagttgccaacgtttagtttggaactctgaacagactgccggtgataagccggaggaa 1867 Query: 181 ggagaggat 189 || |||||| Sbjct: 1868 ggtgaggat 1876
>emb|X51598.1|PS16SVAL P.sativum 16S rRNA & tRNA-Val chloroplast genes Length = 2315 Score = 232 bits (117), Expect = 9e-58 Identities = 174/189 (92%), Gaps = 3/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||| ||||| ||||||| ||| |||||||||||||||||| Sbjct: 1422 cgcgaatcctcttgaaagagaggagtgccttcgggaatgcg-acacaggtggtgcatggc 1480 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 1481 tgtcgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1540 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || | |||||||||| |||||||||| ||||||| ||||||||||||| Sbjct: 1541 tttagttgccaacgtttagtttggaactctgaacagactgccggtgataagccggaggaa 1600 Query: 181 ggagaggat 189 || |||||| Sbjct: 1601 ggtgaggat 1609
>emb|AJ401353.1|CCA401353 Cuscuta campestris chloroplast 16S rRNA gene Length = 1990 Score = 232 bits (117), Expect = 9e-58 Identities = 174/189 (92%), Gaps = 3/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||| Sbjct: 1196 cgcgaatcctcttgaaagggaggggtgct-tcgggaacgcggacacaggtggtgcatggc 1254 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 1255 tgtcgtcagctcgtgccgtaaggtgttgggttcagtcccgcaacgagcgcaaccctcgtg 1314 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | | |||||||||||||||||||| || |||| ||||||||||||| Sbjct: 1315 tttagttgccatcgtttcgtttggaaccctgaacagactgcgggtgataagccggaggaa 1374 Query: 181 ggagaggat 189 || |||||| Sbjct: 1375 ggtgaggat 1383
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 232 bits (117), Expect = 9e-58 Identities = 174/189 (92%), Gaps = 3/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||| ||||| ||||||| ||| |||||||||||||||||| Sbjct: 1689 cgcgaatcctcttgaaagagaggagtgccttcgggaatgcg-acacaggtggtgcatggc 1747 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 1748 tgtcgtcagctcgtgccgtgaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1807 Query: 122 tttagttgcc-actatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 |||||||||| || | |||||||||| |||||||||| ||||||| ||||||||||||| Sbjct: 1808 tttagttgccaacgtttagtttggaactctgaacagactgccggtgataagccggaggaa 1867 Query: 181 ggagaggat 189 || |||||| Sbjct: 1868 ggtgaggat 1876
>emb|X58864.1|CARRN16S C.americana plastid 16S rRNA gene and spacer region Length = 1978 Score = 228 bits (115), Expect = 1e-56 Identities = 170/185 (91%), Gaps = 5/185 (2%) Strand = Plus / Plus Query: 6 gaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64 ||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 1046 gaatcctcttgaaagagaggggtgccttcgggaacgtggacacaggtggtgcatggctgt 1105 Query: 65 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124 |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 1106 cgtcagctcgtgccgtaaggtgttgggttaagtcccctaacgagcgcaaccctcgtgttt 1165 Query: 125 agttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggag 184 ||||||| |||| ||||||||||||| ||||| ||||||| |||||| |||||||| | Sbjct: 1166 agttgcc-ctat---tttggaaccctgagcagactgccggtgataagccagaggaaggtg 1221 Query: 185 aggat 189 ||||| Sbjct: 1222 aggat 1226
>gb|AF244549.1|AF244549 Adiantum pedatum 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1484 Score = 228 bits (115), Expect = 1e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||||| | ||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 963 aagagaggagcgccttcgggaacgcagacacaggtggtgcatggctgtcgtcagctcgtg 1022 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccactat 136 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1023 ccgtgaggtgttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccactat 1082 Query: 137 -gagtttggaaccctgaacagaccgccggtgttaagccggaggaagg 182 ||||||||||||| ||||||| ||||||| |||||||||||||| Sbjct: 1083 caagtttggaaccctaaacagactgccggtgacaagccggaggaagg 1129
>gb|U24595.1|TOU24595 Tmesipteris oblanceolata chloroplast 16S rRNA gene, partial sequence Length = 1436 Score = 226 bits (114), Expect = 6e-56 Identities = 148/158 (93%), Gaps = 1/158 (0%) Strand = Plus / Plus Query: 33 cgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggt 92 ||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 964 cgggaacacagacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttaggt 1023 Query: 93 taagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttggaaccctg 151 |||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 1024 taagtcccgcaacgagcgcaaccctcgtgtttagttgccattactgagtttggaacccta 1083 Query: 152 aacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||| ||||||| ||||||||||||||| |||||| Sbjct: 1084 aacagactgccggtgataagccggaggaaggtgaggat 1121
>gb|AF244550.1|AF244550 Calypogeia muelleriana 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1481 Score = 224 bits (113), Expect = 2e-55 Identities = 153/165 (92%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 26 gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 969 gtgccttcgggaacgcggacacaggtggtgcatggctgtcgccagctcgtgccgtaaggt 1028 Query: 86 gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttgg 144 ||||||||||||| ||||||||||||||||||| ||||||||||||| | |||||| || Sbjct: 1029 gttgggttaagtcccgcaacgagcgcaaccctcttgtttagttgccataactgagttcgg 1088 Query: 145 aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 |||||| ||||||| ||||||| ||||||||||||||| |||||| Sbjct: 1089 aaccctaaacagactgccggtgataagccggaggaaggtgaggat 1133
>gb|U24586.1|JVU24586 Juniperus virginiana chloroplast 16S rRNA gene, partial sequence Length = 1454 Score = 224 bits (113), Expect = 2e-55 Identities = 171/188 (90%), Gaps = 3/188 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaaga-gaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||| ||||| | |||| ||||| |||||||||||||||||||||||||||||| Sbjct: 942 cgcgaatccttttgaaaaagaggagtgccttcgggaacgcggacacaggtggtgcatggc 1001 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 1002 tgtcgtcagttcgtgccgcaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1061 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 ||||||||||| | |||||||||| |||||||||| |||||||||||||||||||| Sbjct: 1062 tttagttgccataa--agtttggaactctgaacagactatcggtgttaagccggaggaag 1119 Query: 182 gagaggat 189 | |||||| Sbjct: 1120 gtgaggat 1127
>emb|AJ401355.1|CPL401355 Cuscuta platyloba chloroplast 16S rRNA gene Length = 1998 Score = 224 bits (113), Expect = 2e-55 Identities = 173/189 (91%), Gaps = 3/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||| Sbjct: 1198 cgcgaatcctcttgaaagggaggggtgct-tcgggaacgcggacacaggtggtgcatggc 1256 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| || Sbjct: 1257 tgtcgtcagctcgtgccgtaaggtgttgggttcagtcccgcaacgagcgcaaccctcttg 1316 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | | |||||||||||||||||||| ||||||| ||||| ||||||| Sbjct: 1317 tttagttgccatcgtttcgtttggaaccctgaacagactgccggtgataagcgggaggaa 1376 Query: 181 ggagaggat 189 || |||||| Sbjct: 1377 ggtgaggat 1385
>gb|AF141146.1|AF141146 Vigna unguiculata clone TV72NBS3 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 378 Score = 220 bits (111), Expect = 4e-54 Identities = 139/147 (94%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 44 acacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgca 103 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 15 acacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgca 74 Query: 104 acgagcgcaaccctcgtgtttagttgccacta-tgagtttggaaccctgaacagaccgcc 162 ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| ||| Sbjct: 75 acgagcgcaaccctcgtgtttagttgccaagattgagtttggaaccctgagcagactgcc 134 Query: 163 ggtgttaagccggaggaaggagaggat 189 |||| ||||||||||||||| |||||| Sbjct: 135 ggtgataagccggaggaaggtgaggat 161
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 218 bits (110), Expect = 1e-53 Identities = 126/130 (96%), Gaps = 1/130 (0%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 55239 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 55180 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 55179 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgtaacgagcgcaaccctcgtg 55120 Query: 122 tttagttgcc 131 |||||||||| Sbjct: 55119 tttagttgcc 55110 Score = 218 bits (110), Expect = 1e-53 Identities = 126/130 (96%), Gaps = 1/130 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 34589 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 34648 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 34649 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgtaacgagcgcaaccctcgtg 34708 Query: 122 tttagttgcc 131 |||||||||| Sbjct: 34709 tttagttgcc 34718
>gb|AF393578.1| Bazzania trilobata small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1464 Score = 218 bits (110), Expect = 1e-53 Identities = 147/158 (93%), Gaps = 1/158 (0%) Strand = Plus / Plus Query: 33 cgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggt 92 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 953 cgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggt 1012 Query: 93 taagtctcgcaacgagcgcaaccctcgtgtttagttgcca-ctatgagtttggaaccctg 151 |||||| ||||||||||||||||||| ||||||||||||| | ||||| |||||||| Sbjct: 1013 taagtcccgcaacgagcgcaaccctcttgtttagttgccatcactgagtccggaacccta 1072 Query: 152 aacagaccgccggtgttaagccggaggaaggagaggat 189 ||||||| ||||||| ||||||||||||||| |||||| Sbjct: 1073 aacagactgccggtgataagccggaggaaggtgaggat 1110
>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_D08 Length = 119557 Score = 218 bits (110), Expect = 1e-53 Identities = 134/142 (94%) Strand = Plus / Plus Query: 48 aggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacga 107 ||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||| | Sbjct: 114159 aggtggtgcatggttgtcgtcagctcgtgttgtaaggtgttggtttaagtctcgcaacaa 114218 Query: 108 gcgcaaccctcgtgtttagttgccactatgagtttggaaccctgaacagaccgccggtgt 167 ||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 114219 gcgcaacactcatgtttagttgccattatgagtttggaaccctgaacagaccgccggtgt 114278 Query: 168 taagccggaggaaggagaggat 189 |||||||||||||||||||||| Sbjct: 114279 taagccggaggaaggagaggat 114300
>gb|AF141142.1|AF141142 Vigna unguiculata clone VU124NBS2 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 586 Score = 218 bits (110), Expect = 1e-53 Identities = 138/146 (94%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 44 acacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgca 103 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 439 acacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgca 498 Query: 104 acgagcgcaaccctcgtgtttagttgccactatgagtttggaaccctgaacagaccgccg 163 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||| Sbjct: 499 acgagcgcaaccctcgtgtttagttgccaagatgagtttggaaccctgagcagactgccg 558 Query: 164 gtgttaagccggaggaaggagaggat 189 ||| |||||| |||||||| |||||| Sbjct: 559 gtgataagcc-gaggaaggtgaggat 583
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 218 bits (110), Expect = 1e-53 Identities = 126/130 (96%), Gaps = 1/130 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1517 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 1576 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 1577 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgtaacgagcgcaaccctcgtg 1636 Query: 122 tttagttgcc 131 |||||||||| Sbjct: 1637 tttagttgcc 1646
>gb|AF445656.1| Uncultured eukaryote clone SM1B08 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 1475 Score = 216 bits (109), Expect = 6e-53 Identities = 170/188 (90%), Gaps = 3/188 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaaga-gaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||| ||||| | |||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 969 cgcgaatccttttgaaaaagaggagtgccttcgggaacacggacacaggtggtgcatggc 1028 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 1029 tgtcgtcagttcgtgccgcaaggtgttgggttaagtcccgcaacgagcgcaaccctcgtg 1088 Query: 122 tttagttgccactatgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 ||||||||||| | |||||||||| |||||||||| |||||||||||||||||||| Sbjct: 1089 tttagttgccataa--agtttggaactctgaacagactatcggtgttaagccggaggaag 1146 Query: 182 gagaggat 189 | |||||| Sbjct: 1147 gtgaggat 1154
>gb|U24583.1|DMU24583 Doodia maxima chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 216 bits (109), Expect = 6e-53 Identities = 165/181 (91%), Gaps = 2/181 (1%) Strand = Plus / Plus Query: 4 gcgaatcctcttgaaga-gaggggtgccctcgggaacgcggacacaggtggtgcatggct 62 ||||||||||||||| | |||| | ||| | |||||||| |||||||||||||||||||| Sbjct: 923 gcgaatcctcttgaaaaagaggagcgcctttgggaacgcagacacaggtggtgcatggct 982 Query: 63 gtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgt 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 983 gtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaacccccgtgt 1042 Query: 123 ttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 ||||||||||||| ||||||||||||| ||||||| ||||||| ||||| |||||||| Sbjct: 1043 ttagttgccactaccaagtttggaaccctaaacagactgccggtgataagctggaggaag 1102 Query: 182 g 182 | Sbjct: 1103 g 1103
>gb|DQ494144.1| Uncultured cyanobacterium 16S ribosomal RNA gene, partial sequence Length = 414 Score = 212 bits (107), Expect = 9e-52 Identities = 156/172 (90%), Gaps = 2/172 (1%) Strand = Plus / Plus Query: 20 agaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccg 79 ||||||||||| |||||||| | |||||||||||||||||||||||||||||||||| || Sbjct: 28 agaggggtgccttcgggaacncngacacaggtggtgcatggctgtcgtcagctcgtgncg 87 Query: 80 taagg-tgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-ctatg 137 | ||| |||||||||||||| |||||||||||||||||| |||||||||||||| | || Sbjct: 88 tnaggatgttgggttaagtcccgcaacgagcgcaaccctngtgtttagttgccaccgttg 147 Query: 138 agtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 |||||||||||||||| |||| ||||||| ||| ||||||||||| |||||| Sbjct: 148 agtttggaaccctgaanagactgccggtgataanccggaggaaggtgaggat 199
>gb|AF141149.1|AF141149 Vigna unguiculata clone TV72NBS4 16S ribosomal RNA gene, partial sequence Length = 397 Score = 212 bits (107), Expect = 9e-52 Identities = 138/147 (93%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 44 acacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgca 103 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 32 acacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgca 91 Query: 104 acgagcgcaaccctcgtgtttagttgcc-actatgagtttggaaccctgaacagaccgcc 162 |||||||||||||||||||||||||||| || | ||||||||||||||| ||||| ||| Sbjct: 92 acgagcgcaaccctcgtgtttagttgccaacatttagtttggaaccctgagcagactgcc 151 Query: 163 ggtgttaagccggaggaaggagaggat 189 |||| ||||||||||||||| |||||| Sbjct: 152 ggtgataagccggaggaaggtgaggat 178
>gb|U24588.1|LJU24588 Lygodium japonicum chloroplast 16S rRNA gene, partial sequence Length = 1437 Score = 210 bits (106), Expect = 3e-51 Identities = 146/158 (92%), Gaps = 1/158 (0%) Strand = Plus / Plus Query: 26 gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85 ||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 946 gtgccttcgggaacgtggatacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 1005 Query: 86 gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttgg 144 ||||||||||||| ||||||||||||||||||||||||||||||||| || | | |||| Sbjct: 1006 gttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccattactcaaattgg 1065 Query: 145 aaccctgaacagaccgccggtgttaagccggaggaagg 182 |||||| ||||||| ||||||| ||||||||||||||| Sbjct: 1066 aaccctaaacagactgccggtgataagccggaggaagg 1103
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 208 bits (105), Expect = 1e-50 Identities = 164/181 (90%), Gaps = 2/181 (1%) Strand = Plus / Plus Query: 4 gcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggct 62 ||||||||||||||| ||| || | ||| |||||||||| |||||||||||||||||||| Sbjct: 140904 gcgaatcctcttgaaagaggggagcgccttcgggaacgcagacacaggtggtgcatggct 140963 Query: 63 gtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgt 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140964 gtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaacccccgtgt 141023 Query: 123 ttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||| || ||||||||||||| |||||| ||||||| ||||||||||||| Sbjct: 141024 ttagttgccattaccaagtttggaaccctagacagactgccggtgacaagccggaggaag 141083 Query: 182 g 182 | Sbjct: 141084 g 141084 Score = 208 bits (105), Expect = 1e-50 Identities = 164/181 (90%), Gaps = 2/181 (1%) Strand = Plus / Minus Query: 4 gcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggct 62 ||||||||||||||| ||| || | ||| |||||||||| |||||||||||||||||||| Sbjct: 91947 gcgaatcctcttgaaagaggggagcgccttcgggaacgcagacacaggtggtgcatggct 91888 Query: 63 gtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgt 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 91887 gtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaacccccgtgt 91828 Query: 123 ttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaag 181 |||||||||| || ||||||||||||| |||||| ||||||| ||||||||||||| Sbjct: 91827 ttagttgccattaccaagtttggaaccctagacagactgccggtgacaagccggaggaag 91768 Query: 182 g 182 | Sbjct: 91767 g 91767
>gb|AY100594.1| Uncultured bacterium clone cvf116009 16S ribosomal RNA gene, partial sequence Length = 680 Score = 202 bits (102), Expect = 8e-49 Identities = 157/174 (90%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||||||| ||||| ||||||| || ||||||||||||||||||||||||||||||| || Sbjct: 225 aagagaggagtgccttcgggaatgcagacacaggtggtgcatggctgtcgtcagctcatg 284 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcc-acta 135 |||||||||||||||| |||| | ||||||||||||||||| |||||||||||| || Sbjct: 285 ccgtaaggtgttgggtagagtcccacaacgagcgcaaccctcatgtttagttgccaacat 344 Query: 136 tgagtttggaaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 | ||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 345 ttagtttggaaccctgaacagactgccggtgataagccggaggaaggtgaggat 398
>gb|AY054380.1| Hordeum patagonicum clone HpaLTR-INS Sukkula retrotransposon long terminal repeat, complete sequence Length = 7731 Score = 202 bits (102), Expect = 8e-49 Identities = 219/249 (87%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 210 gtctacttcacggattcgttcttcttccatgctggatc-caggcaatatgatc-atttcc 267 |||| |||||||||||||||||||||||| || ||||| ||||||| |||| | |||||| Sbjct: 2746 gtcttcttcacggattcgttcttcttccaagcgggatctcaggcaagatgacccatttcc 2805 Query: 268 ctatataccagtactatcattgctatgctagttgtgtcagttctatcgctatgtctcgct 327 || |||||| |||||||||||| ||||||||||| || |||||||||| |||||||| Sbjct: 2806 ctggataccattactatcattgccatgctagttgtctcgtttctatcgct--gtctcgct 2863 Query: 328 atctaccacctgttatgtcaagcctccctacatttccatgaaaagcctctaacccctcca 387 | ||||||| ||| |||||||||||||| | ||| ||||||||||||||||||||||||| Sbjct: 2864 acctaccac-tgt-atgtcaagcctcccaa-attgccatgaaaagcctctaacccctcca 2920 Query: 388 catccgagcaaacctttgtttggctatgttactgcttgcttggcccttcttatagcgttt 447 |||| ||||||| || ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2921 gatcccagcaaacatt-gtttggctatgttactgcttgctcagcccttcttatagcgttg 2979 Query: 448 ccagttgca 456 | ||||||| Sbjct: 2980 ctagttgca 2988
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 198 bits (100), Expect = 1e-47 Identities = 148/164 (90%), Gaps = 5/164 (3%) Strand = Plus / Minus Query: 26 gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 148001 gtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtgaggt 147942 Query: 86 gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccactatgagtttgga 145 ||||||||||||| |||||||||||||||||||||||||||||||||| | ||| Sbjct: 147941 gttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccacaa-----aagga 147887 Query: 146 accctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||| |||||| ||||||| ||||||||||||||| |||||| Sbjct: 147886 accctagacagactgccggtgataagccggaggaaggtgaggat 147843
>gb|AY387369.1| Uncultured eukaryote clone OT124 16S ribosomal RNA gene, partial sequence Length = 1056 Score = 196 bits (99), Expect = 5e-47 Identities = 112/115 (97%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 942 cgcgaatcctcttgaaagagaggggtgccttcgggaacgcggacacaggtggtgcatggc 1001 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccc 116 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1002 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccc 1056
>gb|AF393589.1| Cosmarium botrytis small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1406 Score = 196 bits (99), Expect = 5e-47 Identities = 149/164 (90%), Gaps = 5/164 (3%) Strand = Plus / Plus Query: 26 gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 949 gtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtgaggt 1008 Query: 86 gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccactatgagtttgga 145 ||||||||||||| |||||||||||||||||||||||||||||||||| || ||| Sbjct: 1009 gttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgccac----ag-aagga 1063 Query: 146 accctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||| |||||| ||||||| ||||||||||||||| |||||| Sbjct: 1064 accctagacagactgccggtgataagccggaggaaggtgaggat 1107
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 194 bits (98), Expect = 2e-46 Identities = 166/186 (89%), Gaps = 2/186 (1%) Strand = Plus / Minus Query: 6 gaatcctcttga-agagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64 ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 140842 gaatcttcttgagagagaggagtgccctcgggaacgcggacacaggtggtgcatggctgt 140783 Query: 65 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124 |||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||| | Sbjct: 140782 cgtcagctcgtgccgtgaggtgttgggttgagtcccgcaacgagcgcaaccctcgtgtct 140723 Query: 125 agttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183 |||||||| | || | |||||||||| ||||||| ||||| | |||||||||| || Sbjct: 140722 agttgccatcattgggcttggaaccctaaacagactgccggcgaggagccggaggagggt 140663 Query: 184 gaggat 189 |||||| Sbjct: 140662 gaggat 140657 Score = 194 bits (98), Expect = 2e-46 Identities = 166/186 (89%), Gaps = 2/186 (1%) Strand = Plus / Plus Query: 6 gaatcctcttga-agagaggggtgccctcgggaacgcggacacaggtggtgcatggctgt 64 ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 81035 gaatcttcttgagagagaggagtgccctcgggaacgcggacacaggtggtgcatggctgt 81094 Query: 65 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124 |||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||| | Sbjct: 81095 cgtcagctcgtgccgtgaggtgttgggttgagtcccgcaacgagcgcaaccctcgtgtct 81154 Query: 125 agttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183 |||||||| | || | |||||||||| ||||||| ||||| | |||||||||| || Sbjct: 81155 agttgccatcattgggcttggaaccctaaacagactgccggcgaggagccggaggagggt 81214 Query: 184 gaggat 189 |||||| Sbjct: 81215 gaggat 81220
>gb|AF393611.1| Spirogyra maxima small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1458 Score = 192 bits (97), Expect = 8e-46 Identities = 140/155 (90%), Gaps = 7/155 (4%) Strand = Plus / Plus Query: 35 ggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggtta 94 |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 957 ggaacgtggacacaggtggtgcatggctgtcgtcagctcgtgccgtgaggtgttgggtta 1016 Query: 95 agtctcgcaacgagcgcaaccctcgtgtttagttgccactatgagtttggaaccctgaac 154 |||| |||||||||||||||||||||||||||||||||| | |||||||| ||| Sbjct: 1017 agtcccgcaacgagcgcaaccctcgtgtttagttgccacaa-------ggaaccctaaac 1069 Query: 155 agaccgccggtgttaagccggaggaaggagaggat 189 |||| ||||||| ||||||||||||||| |||||| Sbjct: 1070 agactgccggtgataagccggaggaaggtgaggat 1104
>gb|U24596.1|SMU24596 Spirogyra maxima chloroplast 16S rRNA gene, complete sequence Length = 1657 Score = 192 bits (97), Expect = 8e-46 Identities = 140/155 (90%), Gaps = 7/155 (4%) Strand = Plus / Plus Query: 35 ggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggtta 94 |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1084 ggaacgtggacacaggtggtgcatggctgtcgtcagctcgtgccgtgaggtgttgggtta 1143 Query: 95 agtctcgcaacgagcgcaaccctcgtgtttagttgccactatgagtttggaaccctgaac 154 |||| |||||||||||||||||||||||||||||||||| | |||||||| ||| Sbjct: 1144 agtcccgcaacgagcgcaaccctcgtgtttagttgccacaa-------ggaaccctaaac 1196 Query: 155 agaccgccggtgttaagccggaggaaggagaggat 189 |||| ||||||| ||||||||||||||| |||||| Sbjct: 1197 agactgccggtgataagccggaggaaggtgaggat 1231
>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence Length = 279448 Score = 186 bits (94), Expect = 5e-44 Identities = 110/113 (97%), Gaps = 3/113 (2%) Strand = Plus / Minus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145580 cgcgaatcctcttgaaagagaggggtgccctcgggaacgcggacacaggtggtgcatggc 145521 Query: 62 tgtcgtcagctcgtgccgtaag--gtgttgggttaagtctcgcaacgagcgca 112 |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 145520 tgtcgtcagctcgtgccgtaaggtgtgttgggttaagtctcgcaacgagcgca 145468
>gb|U24584.1|ETU24584 Ephedra trifurca chloroplast 16S rRNA gene, partial sequence Length = 1428 Score = 186 bits (94), Expect = 5e-44 Identities = 165/186 (88%), Gaps = 2/186 (1%) Strand = Plus / Plus Query: 6 gaatcctcttgaagagaggg-gtgccctcgggaacgcggacacaggtggtgcatggctgt 64 |||||||| |||| || ||| ||||| |||||||| |||||||||||||||||||||||| Sbjct: 916 gaatcctcctgaaaagggggagtgccttcgggaacacggacacaggtggtgcatggctgt 975 Query: 65 cgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgttt 124 ||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||| Sbjct: 976 cgtcagctcgtgccgtagggtgttgggttaagtcccgcaacgagcgcaacccttttgttt 1035 Query: 125 agttgccactatg-agtttggaaccctgaacagaccgccggtgttaagccggaggaagga 183 |||||||| || ||||||||||||| ||||||| || || | | ||||||||||||| Sbjct: 1036 agttgccatcgtgtagtttggaaccctaaacagactgctggcgatgagccggaggaaggt 1095 Query: 184 gaggat 189 |||||| Sbjct: 1096 gaggat 1101
>gb|AY054378.1| Hordeum vulgare clone HmaLTR-INS Sukkula retrotransposon long terminal repeat, complete sequence Length = 7919 Score = 184 bits (93), Expect = 2e-43 Identities = 222/261 (85%), Gaps = 3/261 (1%) Strand = Plus / Plus Query: 215 cttcacggattcgttcttcttccatgctggatc-caggcaatatgat-catttccctata 272 ||||| ||| ||||||||||||| || ||||| ||||||| |||| ||||||| | | Sbjct: 2837 cttcatggaatcgttcttcttccgagcgggatctcaggcaagatgacacatttccgtgga 2896 Query: 273 taccagtactatcattgctatgctagttgtgtcagttctatcgctatgtctcgctatcta 332 ||||| |||||||||||||||||||||||| ||||| || ||||||| |||| ||| Sbjct: 2897 taccactactatcattgctatgctagttgtcctgcttctaccgttatgtcttgctaccta 2956 Query: 333 ccacctgttatgtcaagcctccctacatttccatgaaaagcctctaacccctccacatcc 392 |||| |||| |||| |||||||| ||||| |||||| ||||||||| ||||| ||||||| Sbjct: 2957 ccacttgtt-tgtcgagcctcccaacattgccatgataagcctctagccccttcacatcc 3015 Query: 393 gagcaaacctttgtttggctatgttactgcttgcttggcccttcttatagcgtttccagt 452 |||||||||||||||||||||||||| ||||||| |||||||||||||||||| || Sbjct: 3016 cagcaaacctttgtttggctatgttaccgcttgctcaacccttcttatagcgtttctagc 3075 Query: 453 tgcaagtgtagttgcttccat 473 |||| ||| |||||||||||| Sbjct: 3076 tgcaggtgcagttgcttccat 3096
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 184 bits (93), Expect = 2e-43 Identities = 148/165 (89%), Gaps = 1/165 (0%) Strand = Plus / Minus Query: 26 gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85 ||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| || | Sbjct: 116531 gtgccttcgggagcgcggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagat 116472 Query: 86 gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttgg 144 ||||||||||||| ||||||||||||||||||||| ||||||||||| || | |||| || Sbjct: 116471 gttgggttaagtcccgcaacgagcgcaaccctcgtttttagttgccagtattaagttggg 116412 Query: 145 aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||| || |||| ||||||| ||||||||||||||| |||||| Sbjct: 116411 caccctaaaaagactgccggtgataagccggaggaaggtgaggat 116367 Score = 184 bits (93), Expect = 2e-43 Identities = 148/165 (89%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 26 gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85 ||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| || | Sbjct: 85457 gtgccttcgggagcgcggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagat 85516 Query: 86 gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttgg 144 ||||||||||||| ||||||||||||||||||||| ||||||||||| || | |||| || Sbjct: 85517 gttgggttaagtcccgcaacgagcgcaaccctcgtttttagttgccagtattaagttggg 85576 Query: 145 aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||| || |||| ||||||| ||||||||||||||| |||||| Sbjct: 85577 caccctaaaaagactgccggtgataagccggaggaaggtgaggat 85621
>gb|AF244555.1|AF244555 Gnetum leyboldii 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1448 Score = 184 bits (93), Expect = 2e-43 Identities = 148/165 (89%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 26 gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85 ||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 967 gtgccttcgggaacacggccacaggtggtgcatggctgtcgtcagctcgtgccgtagggt 1026 Query: 86 gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca-ctatgagtttgg 144 ||||||||||||| |||||||||||||||||| ||||||||||||| | |||||||| Sbjct: 1027 gttgggttaagtcccgcaacgagcgcaacccttttgtttagttgccatcgtggagtttgg 1086 Query: 145 aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 |||||| |||||||||| || | | ||||||||||||| |||||| Sbjct: 1087 aaccctaaacagaccgctggcgatgagccggaggaaggtgaggat 1131
>gb|AY942956.1| Uncultured Pseudomonas sp. clone 29 16S ribosomal RNA gene, partial sequence Length = 960 Score = 182 bits (92), Expect = 8e-43 Identities = 111/116 (95%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| ||| || ||||| |||||||||||||||||||||||||||||| Sbjct: 469 cgcgaatcctcttgaaagagcggagtgccttcgggaacgcggacacaggtggtgcatggc 528 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccct 117 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 529 tgtcgtcagctcgtgccgtaaggtgttgggttaagtcccgcaacgagcgcaaccct 584
>gb|U67743.1|CCU67743 Cynomorium coccineum chloroplast 16S ribosomal RNA gene, partial sequence Length = 1398 Score = 182 bits (92), Expect = 8e-43 Identities = 110/116 (94%) Strand = Plus / Plus Query: 17 aagagaggggtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtg 76 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 909 aagataggggtgccctcgggaacgtggacacaggtggtgcatggctgtcgtcagctcgtg 968 Query: 77 ccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcca 132 |||||||||||||||||||||| | |||||||||||||||| ||||||||||||| Sbjct: 969 ccgtaaggtgttgggttaagtcccctaacgagcgcaaccctcatgtttagttgcca 1024
>gb|U67740.1|BAU67740 Bdallophyton americanum chloroplast 16S ribosomal RNA gene, partial sequence Length = 1483 Score = 182 bits (92), Expect = 8e-43 Identities = 117/124 (94%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 35 ggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggtta 94 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1010 ggaacgtggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggtta 1069 Query: 95 agtctcgcaacgagcgcaaccctcgtgtttagttgccactatgagtttggaaccctgaac 154 |||||||||||||||||||||||| ||||||||||||| | | || ||||||| |||||| Sbjct: 1070 agtctcgcaacgagcgcaaccctcatgtttagttgccattgtcag-ttggaactctgaac 1128 Query: 155 agac 158 |||| Sbjct: 1129 agac 1132
>gb|U24591.1|SAU24591 Selaginella apoda chloroplast 16S rRNA gene, partial sequence Length = 1446 Score = 180 bits (91), Expect = 3e-42 Identities = 167/189 (88%), Gaps = 5/189 (2%) Strand = Plus / Plus Query: 6 gaatcctcttga-agagaggggtgccct---cgggaacgcggacacaggtggtgcatggc 61 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 931 gaatcctcttgagagagaggggtgccctagccgggaacacggacacaggtggtgcatggc 990 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||||||| ||| |||||||| |||| |||||||||||||||||||||| Sbjct: 991 tgtcgtcagctcgtgccgtgaggcgttgggttgagtcccgcaacgagcgcaaccctcgtg 1050 Query: 122 tttagttgcca-ctatgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| | || | |||||||||| |||| || ||||| | | |||||||||| Sbjct: 1051 tttagttgccatcattgggcttggaaccctaaacatactgccggcgatgagccggaggag 1110 Query: 181 ggagaggat 189 || |||||| Sbjct: 1111 ggtgaggat 1119
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 176 bits (89), Expect = 5e-41 Identities = 95/97 (97%) Strand = Plus / Plus Query: 34 gggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggtt 93 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 94065 gggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtgaggtgttgggtt 94124 Query: 94 aagtctcgcaacgagcgcaaccctcgtgtttagttgc 130 ||||| ||||||||||||||||||||||||||||||| Sbjct: 94125 aagtcccgcaacgagcgcaaccctcgtgtttagttgc 94161
>gb|AC152494.1| Zea mays BAC clone Z418K17, complete sequence Length = 195448 Score = 176 bits (89), Expect = 5e-41 Identities = 98/101 (97%) Strand = Plus / Plus Query: 51 tggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcg 110 |||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 63829 tggtgcatggttgtcgtcatctcgtgtcgtaaggtgttgggttaagtctcgcaacgagcg 63888 Query: 111 caaccctcgtgtttagttgccactatgagtttggaaccctg 151 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 caaccctcgtgtttagttgccactatgagtttggaaccctg 63929 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 tgttaagccggaggaaggagaggat 189 ||||||||| ||||||||||||||| Sbjct: 63928 tgttaagccagaggaaggagaggat 63952
>gb|AF497789.1| Zygnema sp. KA-2002 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 808 Score = 176 bits (89), Expect = 5e-41 Identities = 95/97 (97%) Strand = Plus / Plus Query: 34 gggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggtt 93 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 632 gggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtgaggtgttgggtt 691 Query: 94 aagtctcgcaacgagcgcaaccctcgtgtttagttgc 130 ||||| ||||||||||||||||||||||||||||||| Sbjct: 692 aagtcccgcaacgagcgcaaccctcgtgtttagttgc 728
>gb|AF497787.1| Coleochaete irregularis 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 812 Score = 176 bits (89), Expect = 5e-41 Identities = 140/157 (89%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 34 gggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggtt 93 ||||||| ||||||||||||||||||||||||||||||||||| ||| || ||||||||| Sbjct: 632 gggaacgtggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagatgttgggtt 691 Query: 94 aagtctcgcaacgagcgcaaccctcgtgtttagttgcca-ctatgagtttggaaccctga 152 ||||| |||||||||||||||||| || | ||||||||| | | |||||||||| || | Sbjct: 692 aagtcccgcaacgagcgcaacccttgtatctagttgccascgttsagtttggaacyctaa 751 Query: 153 acagaccgccggtgttaagccggaggaaggagaggat 189 |||||| ||||||| ||||||||||||||| |||||| Sbjct: 752 acagactgccggtgataagccggaggaaggtgaggat 788
>gb|AY425776.1| Uncultured phototrophic eukaryote clone 1790-8 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1412 Score = 174 bits (88), Expect = 2e-40 Identities = 97/100 (97%) Strand = Plus / Plus Query: 33 cgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggtgttgggt 92 ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 982 cgggagcgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtgaggtgttgggt 1041 Query: 93 taagtctcgcaacgagcgcaaccctcgtgtttagttgcca 132 |||||| ||||||||||||||||||||||||||||||||| Sbjct: 1042 taagtcccgcaacgagcgcaaccctcgtgtttagttgcca 1081
>gb|AY054379.1| Hordeum murinum clone HmuLTR-INS Sukkula retrotransposon long terminal repeat, complete sequence Length = 7586 Score = 172 bits (87), Expect = 7e-40 Identities = 232/274 (84%), Gaps = 6/274 (2%) Strand = Plus / Plus Query: 184 gaggattcattcaactacgtcagtttgtctacttcacggattcgttcttcttccatgctg 243 |||||||| ||| ||||||| ||| || |||||||||| ||||||||||||||| || | Sbjct: 2518 gaggattcgttcgactacgttggttcgtttacttcacggtttcgttcttcttccaagcgg 2577 Query: 244 gatc-caggcaatatgatcatttccctatataccagtactatcattgctatgctagttgt 302 |||| | ||||| |||||||||||||| |||||| |||||||||||| ||||||||||| Sbjct: 2578 gatctcgggcaagatgatcatttccctggataccattactatcattgccatgctagttgt 2637 Query: 303 gtcagttctatcgctatgtctcgctatctaccacctgttatgtcaagcctccctacattt 362 ||| | ||||| | |||||||||| ||||||| || | || |||||||||| | | | Sbjct: 2638 ttcattgctatcac--tgtctcgctacctaccacttg-tgtgccaagcctccc-aaagtg 2693 Query: 363 ccatgaaaagcctctaacccctccacatccgagcaaacctttgtttggctatgttactgc 422 |||||||||||||||||||||||||| || |||||| | ||||||||||||||||| || Sbjct: 2694 ccatgaaaagcctctaacccctccacgtctcagcaaa-cattgtttggctatgttaccgc 2752 Query: 423 ttgcttggcccttcttatagcgtttccagttgca 456 ||||| |||||||||||||| || | ||||||| Sbjct: 2753 ttgctcagcccttcttatagcattgctagttgca 2786
>gb|AF355383.1| Microcoleus steenstrupii clone 152-2A 16S ribosomal RNA gene, partial sequence Length = 989 Score = 172 bits (87), Expect = 7e-40 Identities = 121/131 (92%), Gaps = 1/131 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||| ||||| |||||| |||| |||||||||||||||||| Sbjct: 600 cgcgaatcctcttgaaagagaggagtgccttcgggagcgcgaacacaggtggtgcatggc 659 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 660 tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaaccctcgtc 719 Query: 122 tttagttgcca 132 ||||||||||| Sbjct: 720 tttagttgcca 730
>gb|AY702116.1| Nephroselmis pyriformis strain CCMP717 16S ribosomal RNA gene, partial sequence; plastid Length = 906 Score = 170 bits (86), Expect = 3e-39 Identities = 101/106 (95%) Strand = Plus / Plus Query: 26 gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85 ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| || | Sbjct: 624 gtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagat 683 Query: 86 gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgcc 131 ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 684 gttgggttaagtcccgcaacgagcgcaaccctcgtgtttagttgcc 729
>gb|AF497790.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 819 Score = 168 bits (85), Expect = 1e-38 Identities = 165/189 (87%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||| ||||||| |||| | ||||| | | || ||||||||||||||||||||||| Sbjct: 603 cgcgaatcttcttgaaagagaagagtgcctttgtgagcgcggacacaggtggtgcatggc 662 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 663 tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaaccctcgtt 722 Query: 122 tttagttgccacta-tgagtttggaaccctgaacagaccgccggtgttaagccggaggaa 180 ||||||||||| || | ||| || ||||| || |||| ||||||| ||||||||||||| Sbjct: 723 tttagttgccagtatttggttgggcaccctaaagagactgccggtgataagccggaggaa 782 Query: 181 ggagaggat 189 || |||||| Sbjct: 783 ggtgaggat 791
>gb|AF497788.1| Chaetosphaeridium globosum 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 816 Score = 168 bits (85), Expect = 1e-38 Identities = 146/165 (88%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 26 gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85 ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| || | Sbjct: 624 gtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagat 683 Query: 86 gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttgg 144 ||||||||||||| ||||||||||||||||||| ||||||||| ||| | || |||| Sbjct: 684 gttgggttaagtcccgcaacgagcgcaaccctcatgtttagttaccatgacaaagattgg 743 Query: 145 aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 |||||| |||||| ||||||| |||||||||||||| |||||| Sbjct: 744 aaccctagacagactgccggtgacaagccggaggaaggtgaggat 788
>gb|AF393583.1| Chaetosphaeridium globosum SAG 26.98 small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1461 Score = 168 bits (85), Expect = 1e-38 Identities = 146/165 (88%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 26 gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85 ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| || | Sbjct: 943 gtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagat 1002 Query: 86 gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttgg 144 ||||||||||||| ||||||||||||||||||| ||||||||| ||| | || |||| Sbjct: 1003 gttgggttaagtcccgcaacgagcgcaaccctcatgtttagttaccatgacaaagattgg 1062 Query: 145 aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 |||||| |||||| ||||||| |||||||||||||| |||||| Sbjct: 1063 aaccctagacagactgccggtgacaagccggaggaaggtgaggat 1107
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 168 bits (85), Expect = 1e-38 Identities = 146/165 (88%), Gaps = 1/165 (0%) Strand = Plus / Minus Query: 26 gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85 ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| || | Sbjct: 127458 gtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagat 127399 Query: 86 gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttgg 144 ||||||||||||| ||||||||||||||||||| ||||||||| ||| | || |||| Sbjct: 127398 gttgggttaagtcccgcaacgagcgcaaccctcatgtttagttaccatgacaaagattgg 127339 Query: 145 aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 |||||| |||||| ||||||| |||||||||||||| |||||| Sbjct: 127338 aaccctagacagactgccggtgacaagccggaggaaggtgaggat 127294 Score = 168 bits (85), Expect = 1e-38 Identities = 146/165 (88%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 26 gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85 ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| || | Sbjct: 92408 gtgccttcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagat 92467 Query: 86 gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccacta-tgagtttgg 144 ||||||||||||| ||||||||||||||||||| ||||||||| ||| | || |||| Sbjct: 92468 gttgggttaagtcccgcaacgagcgcaaccctcatgtttagttaccatgacaaagattgg 92527 Query: 145 aaccctgaacagaccgccggtgttaagccggaggaaggagaggat 189 |||||| |||||| ||||||| |||||||||||||| |||||| Sbjct: 92528 aaccctagacagactgccggtgacaagccggaggaaggtgaggat 92572
>gb|AY689654.1| Uncultured cyanobacterium clone BPM2_A05 16S ribosomal RNA gene, partial sequence Length = 824 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%), Gaps = 5/164 (3%) Strand = Plus / Plus Query: 26 gtgccctcgggaacgcggacacaggtggtgcatggctgtcgtcagctcgtgccgtaaggt 85 ||||| |||||||| |||||||||||||||||||| ||||||||||||||| ||| || | Sbjct: 486 gtgccttcgggaacacggacacaggtggtgcatggttgtcgtcagctcgtgtcgtgagat 545 Query: 86 gttgggttaagtctcgcaacgagcgcaaccctcgtgtttagttgccactatgagtttgga 145 ||||||||||||| ||||||||||||||||||||| ||||||||||| |||| ||| Sbjct: 546 gttgggttaagtcccgcaacgagcgcaaccctcgtttttagttgccaatatg-----gga 600 Query: 146 accctgaacagaccgccggtgttaagccggaggaaggagaggat 189 ||||| || |||| ||||||| ||| ||||||||||| |||||| Sbjct: 601 accctaaagagactgccggtgataaaccggaggaaggtgaggat 644
>gb|AF218370.1| Arthronema gygaxiana UTCC 393 16S ribosomal RNA gene, partial sequence Length = 1388 Score = 165 bits (83), Expect = 2e-37 Identities = 120/131 (91%), Gaps = 1/131 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| | |||| ||||| |||||| |||| |||||||||||||||||| Sbjct: 894 cgcgaatcctcttgaaagggaggagtgccttcgggagcgcgaacacaggtggtgcatggc 953 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 954 tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaaccctcgtt 1013 Query: 122 tttagttgcca 132 ||||||||||| Sbjct: 1014 tttagttgcca 1024
>gb|AY218828.1| Nostoc muscorum CENA61 16S ribosomal RNA gene, partial sequence Length = 1338 Score = 165 bits (83), Expect = 2e-37 Identities = 120/131 (91%), Gaps = 1/131 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||| | ||||| |||||| |||| |||||||||||||||||| Sbjct: 900 cgcgaatcctcttgaaagagaagagtgccttcgggagcgcgaacacaggtggtgcatggc 959 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 960 tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaaccctcgtt 1019 Query: 122 tttagttgcca 132 ||||||||||| Sbjct: 1020 tttagttgcca 1030
>gb|AY239603.1| Leptolyngbya sp. CNP1-B1-4 16S ribosomal RNA gene, partial sequence Length = 1010 Score = 165 bits (83), Expect = 2e-37 Identities = 120/131 (91%), Gaps = 1/131 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| | |||| ||||| |||||| |||| |||||||||||||||||| Sbjct: 621 cgcgaatcctcttgaaagggaggagtgccttcgggagcgcgaacacaggtggtgcatggc 680 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 681 tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaaccctcgtt 740 Query: 122 tttagttgcca 132 ||||||||||| Sbjct: 741 tttagttgcca 751
>gb|AY239600.1| Leptolyngbya sp. CNP1-B3-C9 16S ribosomal RNA gene, partial sequence Length = 1009 Score = 165 bits (83), Expect = 2e-37 Identities = 120/131 (91%), Gaps = 1/131 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| |||||| ||||| |||||| |||| |||||||||||||||||| Sbjct: 620 cgcgaatcctcttgaaagagaggagtgccttcgggagcgcgaacacaggtggtgcatggc 679 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||| ||| Sbjct: 680 tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaacccacgtt 739 Query: 122 tttagttgcca 132 ||||||||||| Sbjct: 740 tttagttgcca 750
>gb|AF132778.1| Pseudanabaena sp. PCC 6903 small subunit ribosomal RNA gene, partial sequence Length = 1407 Score = 165 bits (83), Expect = 2e-37 Identities = 120/131 (91%), Gaps = 1/131 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| | |||| ||||| |||||| |||| |||||||||||||||||| Sbjct: 916 cgcgaatcctcttgaaagggaggagtgccttcgggagcgcgaacacaggtggtgcatggc 975 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 976 tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaaccctcgta 1035 Query: 122 tttagttgcca 132 ||||||||||| Sbjct: 1036 tttagttgcca 1046
>gb|AF132787.1| Pseudanabaena sp. PCC 7402 small subunit ribosomal RNA gene, partial sequence Length = 1179 Score = 165 bits (83), Expect = 2e-37 Identities = 120/131 (91%), Gaps = 1/131 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| | |||| ||||| |||||| |||| |||||||||||||||||| Sbjct: 687 cgcgaatcctcttgaaagggaggagtgccttcgggagcgcgaacacaggtggtgcatggc 746 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 747 tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaaccctcgta 806 Query: 122 tttagttgcca 132 ||||||||||| Sbjct: 807 tttagttgcca 817
>gb|AF355398.1| Leptolyngbya schmidlei clone 145-A3 16S ribosomal RNA gene, partial sequence Length = 988 Score = 165 bits (83), Expect = 2e-37 Identities = 120/131 (91%), Gaps = 1/131 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 |||||||||||||||| | |||| ||||| |||||| |||| |||||||||||||||||| Sbjct: 599 cgcgaatcctcttgaaagggaggagtgccttcgggagcgcgaacacaggtggtgcatggc 658 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 659 tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaaccctcgtt 718 Query: 122 tttagttgcca 132 ||||||||||| Sbjct: 719 tttagttgcca 729
>gb|DQ378254.1| Uncultured soil bacterium clone M37_Pitesti 16S ribosomal RNA gene, complete sequence Length = 1458 Score = 165 bits (83), Expect = 2e-37 Identities = 120/131 (91%), Gaps = 1/131 (0%) Strand = Plus / Plus Query: 3 cgcgaatcctcttgaa-gagaggggtgccctcgggaacgcggacacaggtggtgcatggc 61 ||||||||||| |||| | |||| ||||| |||||| |||| |||||||||||||||||| Sbjct: 950 cgcgaatcctcctgaaagggaggagtgccttcgggagcgcgaacacaggtggtgcatggc 1009 Query: 62 tgtcgtcagctcgtgccgtaaggtgttgggttaagtctcgcaacgagcgcaaccctcgtg 121 ||||||||||||||| ||| || |||||||||||||| |||||||||||||||||||||| Sbjct: 1010 tgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaaccctcgtg 1069 Query: 122 tttagttgcca 132 ||||||||||| Sbjct: 1070 tttagttgcca 1080 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,227,017 Number of Sequences: 3902068 Number of extensions: 4227017 Number of successful extensions: 255123 Number of sequences better than 10.0: 130998 Number of HSP's better than 10.0 without gapping: 130720 Number of HSP's successfully gapped in prelim test: 302 Number of HSP's that attempted gapping in prelim test: 81915 Number of HSP's gapped (non-prelim): 159686 length of query: 527 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 504 effective length of database: 17,143,297,704 effective search space: 8640222042816 effective search space used: 8640222042816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)