Clone Name	basd1o06
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AB181482.1| Bromus inermis BiRP1 mRNA for ribosomal protein,...	266	2e-68
2	emb|Y15009.1|OSY15009 Oryza sativa mRNA for ribosomal protein S4	180	9e-43
3	dbj|AK103949.1| Oryza sativa (japonica cultivar-group) cDNA clon...	180	9e-43
4	dbj|AK102423.1| Oryza sativa (japonica cultivar-group) cDNA clon...	180	9e-43
5	dbj|AK061776.1| Oryza sativa (japonica cultivar-group) cDNA clon...	180	9e-43
6	emb|X79300.1|GHRS4E G.hirsutum (DPL 62) mRNA for ribosomal prote...	157	1e-35
7	gb|AF071891.1|AF071891 Prunus armeniaca 40S ribosomal protein S4...	147	1e-32
8	dbj|AK071862.1| Oryza sativa (japonica cultivar-group) cDNA clon...	133	2e-28
9	gb|AF013487.1|AF013487 Zea mays ribosomal protein S4 type I (rps...	133	2e-28
10	ref|NM_193994.1| Oryza sativa (japonica cultivar-group), predic...	127	1e-26
11	dbj|AK061826.1| Oryza sativa (japonica cultivar-group) cDNA clon...	127	1e-26
12	gb|BT017558.1| Zea mays clone EL01N0424H12.c mRNA sequence	125	4e-26
13	gb|BT016261.1| Zea mays clone Contig94 mRNA sequence	125	4e-26
14	gb|AY525608.1| Zea mays ribosomal protein S4 mRNA, complete cds	125	4e-26
15	gb|AF015522.1|AF015522 Zea mays ribsomal protein S4 (rps4) mRNA,...	125	4e-26
16	emb|X76651.1|STRPS4 S.tuberosum (Desiree) mRNA for ribosomal pro...	113	2e-22
17	gb|DQ268839.1| Solanum tuberosum clone 130D11 40S ribosomal prot...	105	4e-20
18	gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome...	103	2e-19
19	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	103	2e-19
20	dbj|AB232685.1| Panax ginseng mRNA for ribosomal protein S4, com...	98	1e-17
21	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	96	4e-17
22	dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic D...	96	4e-17
23	ref|NM_125228.3| Arabidopsis thaliana structural constituent of ...	86	4e-14
24	ref|XM_475130.1| Oryza sativa (japonica cultivar-group), predic...	86	4e-14
25	gb|AY143834.1| Arabidopsis thaliana At5g58420/mqj2_10 mRNA, comp...	86	4e-14
26	gb|AY070467.1| Arabidopsis thaliana AT5g58420/mqj2_10 mRNA, comp...	86	4e-14
27	gb|AF428285.1|AF428285 Arabidopsis thaliana AT5g58420/mqj2_10 mR...	86	4e-14
28	emb|BX832274.1|CNS09ZPH Arabidopsis thaliana Full-length cDNA Co...	86	4e-14
29	emb|BX830283.1|CNS09ZZO Arabidopsis thaliana Full-length cDNA Co...	86	4e-14
30	emb|BX832264.1|CNS09ZM6 Arabidopsis thaliana Full-length cDNA Co...	86	4e-14
31	gb|AY086206.1| Arabidopsis thaliana clone 22434 mRNA, complete s...	86	4e-14
32	gb|AY085205.1| Arabidopsis thaliana clone 13813 mRNA, complete s...	84	1e-13
33	ref|NM_127291.2| Arabidopsis thaliana structural constituent of ...	82	6e-13
34	gb|AY062983.1| Arabidopsis thaliana putative ribosomal protein S...	82	6e-13
35	gb|AY035131.1| Arabidopsis thaliana putative ribosomal protein S...	82	6e-13
36	gb|AY064625.1| Arabidopsis thaliana unknown protein mRNA, comple...	82	6e-13
37	gb|AF370469.1|AF370469 Arabidopsis thaliana Unknown protein mRNA...	82	6e-13
38	emb|BX820506.1|CNS0A8QA Arabidopsis thaliana Full-length cDNA Co...	82	6e-13
39	emb|BX818868.1|CNS0A8UP Arabidopsis thaliana Full-length cDNA Co...	82	6e-13
40	emb|BX818793.1|CNS0A8YY Arabidopsis thaliana Full-length cDNA Co...	82	6e-13
41	gb|AY084230.1| Arabidopsis thaliana clone 10042 mRNA, complete s...	82	6e-13
42	ref|NM_001036769.1| Arabidopsis thaliana structural constituent ...	76	4e-11
43	ref|NM_120791.2| Arabidopsis thaliana structural constituent of ...	76	4e-11
44	gb|AY079417.1| Arabidopsis thaliana putative 40S ribosomal prote...	76	4e-11
45	gb|AY050933.1| Arabidopsis thaliana putative 40S ribosomal prote...	76	4e-11
46	gb|AY093715.1| Arabidopsis thaliana AT5g07090/T28J14_30 mRNA, co...	76	4e-11
47	gb|AY070769.1| Arabidopsis thaliana AT5g07090/T28J14_30 mRNA, co...	76	4e-11
48	emb|BX832664.1|CNS09ZT5 Arabidopsis thaliana Full-length cDNA Co...	76	4e-11
49	emb|BX832452.1|CNS09ZTE Arabidopsis thaliana Full-length cDNA Co...	76	4e-11
50	emb|BX832256.1|CNS09ZVR Arabidopsis thaliana Full-length cDNA Co...	76	4e-11
51	emb|BX832253.1|CNS09ZUO Arabidopsis thaliana Full-length cDNA Co...	76	4e-11
52	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	74	1e-10
53	emb|BX831856.1|CNS09ZNQ Arabidopsis thaliana Full-length cDNA Co...	74	1e-10
54	dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic D...	74	1e-10
55	dbj|AB025632.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	72	6e-10
56	gb|AF528526.1| Glycine max 40S ribosomal S4 protein mRNA, comple...	70	2e-09
57	gb|AC126779.19| Medicago truncatula clone mth2-34m14, complete s...	68	9e-09
58	emb|AL163652.1|ATT28J14 Arabidopsis thaliana DNA chromosome 5, B...	64	1e-07
59	dbj|AB010697.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	64	1e-07
60	gb|AC146554.5| Medicago truncatula clone mth2-9l7, complete sequ...	62	5e-07
61	gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II sectio...	60	2e-06
62	gb|BT014201.1| Lycopersicon esculentum clone 133378R, mRNA sequence	52	5e-04
63	ref|XM_986316.1| PREDICTED: Mus musculus similar to 40S ribosoma...	48	0.008
64	ref|XM_124146.6| PREDICTED: Mus musculus similar to 40S ribosoma...	48	0.008
65	gb|AC131731.4| Mus musculus BAC clone RP23-117K10 from 3, comple...	48	0.008
66	gb|AC140323.3| Mus musculus BAC clone RP24-325G15 from 3, comple...	48	0.008
67	gb|BC086560.1| Rattus norvegicus ribosomal protein S4, X-linked,...	46	0.033
68	ref|NM_001007600.1| Rattus norvegicus ribosomal protein S4, X-li...	46	0.033
69	emb|X14210.1|RNRPS4 Rat mRNA for ribosomal protein S4	46	0.033
70	dbj|D11087.1|HAMRPS4 Mesocricetus sp. RPS4 mRNA for ribosomal pr...	46	0.033
71	gb|AF511169.1| Sus scrofa clone UMNp272 microsatellite sequence	44	0.13
72	gb|BC106152.1| Mus musculus ribosomal protein S4, X-linked, mRNA...	42	0.51
73	gb|BC009100.1| Mus musculus ribosomal protein S4, X-linked, mRNA...	42	0.51
74	ref|NM_009094.1| Mus musculus ribosomal protein S4, X-linked (Rp...	42	0.51
75	ref|XR_002810.1| PREDICTED: Mus musculus similar to 40S ribosoma...	42	0.51
76	ref|XR_004627.1| PREDICTED: Mus musculus similar to 40S ribosoma...	42	0.51
77	ref|XR_002019.1| PREDICTED: Mus musculus similar to 40S ribosoma...	42	0.51
78	ref|XR_003920.1| PREDICTED: Mus musculus similar to 40S ribosoma...	42	0.51
79	ref|XM_001004419.1| PREDICTED: Mus musculus similar to 40S ribos...	42	0.51
80	ref|XM_001004416.1| PREDICTED: Mus musculus similar to 40S ribos...	42	0.51
81	ref|XM_916606.2| PREDICTED: Mus musculus similar to 40S ribosoma...	42	0.51
82	ref|XR_002186.1| PREDICTED: Mus musculus similar to 40S ribosoma...	42	0.51
83	gb|AC122379.4| Mus musculus BAC clone RP23-476A7 from chromosome...	42	0.51
84	gb|AC102561.4| Mus musculus chromosome 7, clone RP23-201O19, com...	42	0.51
85	dbj|AK135369.1| Mus musculus 12 days embryo female mullerian duc...	42	0.51
86	dbj|AK153211.1| Mus musculus bone marrow macrophage cDNA, RIKEN ...	42	0.51
87	dbj|AK010921.1| Mus musculus 13 days embryo liver cDNA, RIKEN fu...	42	0.51
88	dbj|AK010676.1| Mus musculus ES cells cDNA, RIKEN full-length en...	42	0.51
89	dbj|AK010624.1| Mus musculus ES cells cDNA, RIKEN full-length en...	42	0.51
90	dbj|AK088410.1| Mus musculus 2 days neonate thymus thymic cells ...	42	0.51
91	dbj|AK002445.1| Mus musculus adult male kidney cDNA, RIKEN full-...	42	0.51
92	dbj|AK012429.1| Mus musculus 11 days embryo whole body cDNA, RIK...	42	0.51
93	dbj|AK014210.1| Mus musculus 13 days embryo head cDNA, RIKEN ful...	42	0.51
94	gb|AC027653.3| Mus musculus strain C57BL6/J chromosome 5 clone R...	42	0.51
95	gb|AC124744.3| Mus musculus BAC clone RP23-223E16 from 13, compl...	42	0.51
96	gb|BC089349.1| Mus musculus cDNA clone MGC:102174 IMAGE:6819603,...	42	0.51
97	emb|BX539316.6| Mouse DNA sequence from clone RP24-216F23 on chr...	42	0.51
98	emb|AL954850.12| Mouse DNA sequence from clone RP23-331B22 on ch...	42	0.51
99	gb|BC089348.1| Mus musculus cDNA clone IMAGE:5709768, containing...	42	0.51
100	gb|M73436.1|MUSRSP4 Mouse ribosomal protein S4 (Rps4) mRNA, comp...	42	0.51
101	gb|AC137849.11| Mus musculus chromosome 1, clone RP24-124J24, co...	40	2.0
102	gb|AC110035.8| Mus musculus chromosome 1, clone RP23-237M24, com...	40	2.0
103	ref|XR_004017.1| PREDICTED: Mus musculus similar to 40S ribosoma...	40	2.0
104	dbj|AK148570.1| Mus musculus 2 days neonate sympathetic ganglion...	40	2.0
105	gb|AY857461.1| Suberites domuncula S4 mRNA, complete cds	40	2.0
106	emb|AL353586.14| Human DNA sequence from clone RP11-347I22 on ch...	38	7.9
107	gb|AC113190.8| Homo sapiens chromosome 15, clone RP11-186H10, co...	38	7.9
108	gb|AC016587.9| Homo sapiens chromosome 19 clone CTD-2632B17, com...	38	7.9
109	emb|CR626797.1| full-length cDNA clone CS0DI054YI11 of Placenta ...	38	7.9
110	emb|CR625616.1| full-length cDNA clone CS0DI069YN19 of Placenta ...	38	7.9
111	emb|CR622909.1| full-length cDNA clone CS0DE004YN04 of Placenta ...	38	7.9
112	emb|CR620106.1| full-length cDNA clone CS0DC024YK24 of Neuroblas...	38	7.9
113	emb|CR619631.1| full-length cDNA clone CS0DF020YI03 of Fetal bra...	38	7.9
114	emb|CR618319.1| full-length cDNA clone CS0DI014YL14 of Placenta ...	38	7.9
115	emb|CR617295.1| full-length cDNA clone CS0DA002YL24 of Neuroblas...	38	7.9
116	emb|CR609771.1| full-length cDNA clone CS0DE006YJ15 of Placenta ...	38	7.9
117	emb|CR606605.1| full-length cDNA clone CS0DJ012YL04 of T cells (...	38	7.9
118	emb|CR603462.1| full-length cDNA clone CS0DJ007YB09 of T cells (...	38	7.9
119	emb|CR602023.1| full-length cDNA clone CS0DL001YJ20 of B cells (...	38	7.9
120	emb|CR597212.1| full-length cDNA clone CS0DF028YL05 of Fetal bra...	38	7.9
121	emb|CR594080.1| full-length cDNA clone CS0DE007YF24 of Placenta ...	38	7.9
122	gb|AC137755.5| Mus musculus chromosome 1, clone RP24-279G1, comp...	38	7.9
123	emb|AL928856.5| Mouse DNA sequence from clone RP23-413G24 on chr...	38	7.9
124	emb|AL627393.13| Mouse DNA sequence from clone RP23-154M2 on chr...	38	7.9

---

>dbj|AB181482.1| Bromus inermis BiRP1 mRNA for ribosomal protein, complete cds
          Length = 1053

 Score =  266 bits (134), Expect = 2e-68
 Identities = 155/163 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
           |||||| |||||||||||| ||||||||||||||||||||||| |||||||| |||||||
Sbjct: 103 ggggtttgaagaagcatctcaagaggctcaatgccccgtctcactggatgctggacaagc 162

                                                                       
Query: 61  ttggtggagcttttgcccccaagccatcatctggtcctnacaaggccagggaatgcctgc 120
           |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 163 ttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggagtgcctgc 222

                                                      
Query: 121 ctctgatcctaatnctgaggaacagactgaaatatgctctcac 163
           |||||||||| || |||||||||||||||||||||||||||||
Sbjct: 223 ctctgatcctcatcctgaggaacagactgaaatatgctctcac 265

---

>emb|Y15009.1|OSY15009 Oryza sativa mRNA for ribosomal protein S4
          Length = 1148

 Score =  180 bits (91), Expect = 9e-43
 Identities = 142/160 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
           |||||| ||||||||||||||||||||||||||| ||    ||||||||||| |||||||
Sbjct: 73  ggggtttgaagaagcatctgaagaggctcaatgcgcccaagcattggatgctcgacaagc 132

                                                                       
Query: 61  ttggtggagcttttgcccccaagccatcatctggtcctnacaaggccagggaatgcctgc 120
           |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||||||
Sbjct: 133 ttggtggagcttttgcccccaagccatcttctggtcctcacaagtccagggagtgcctgc 192

                                                   
Query: 121 ctctgatcctaatnctgaggaacagactgaaatatgctct 160
           |||||||||| ||  | |||||||| || || ||||||||
Sbjct: 193 ctctgatcctcattatcaggaacaggctcaagtatgctct 232

---

>dbj|AK103949.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B09, full
           insert sequence
          Length = 1016

 Score =  180 bits (91), Expect = 9e-43
 Identities = 142/160 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
           |||||| ||||||||||||||||||||||||||| ||    ||||||||||| |||||||
Sbjct: 103 ggggtttgaagaagcatctgaagaggctcaatgcgcccaagcattggatgctcgacaagc 162

                                                                       
Query: 61  ttggtggagcttttgcccccaagccatcatctggtcctnacaaggccagggaatgcctgc 120
           |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||||||
Sbjct: 163 ttggtggagcttttgcccccaagccatcttctggtcctcacaagtccagggagtgcctgc 222

                                                   
Query: 121 ctctgatcctaatnctgaggaacagactgaaatatgctct 160
           |||||||||| ||  | |||||||| || || ||||||||
Sbjct: 223 ctctgatcctcattatcaggaacaggctcaagtatgctct 262

---

>dbj|AK102423.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093E13, full
           insert sequence
          Length = 1157

 Score =  180 bits (91), Expect = 9e-43
 Identities = 142/160 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
           |||||| ||||||||||||||||||||||||||| ||    ||||||||||| |||||||
Sbjct: 107 ggggtttgaagaagcatctgaagaggctcaatgcgcccaagcattggatgctcgacaagc 166

                                                                       
Query: 61  ttggtggagcttttgcccccaagccatcatctggtcctnacaaggccagggaatgcctgc 120
           |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||||||
Sbjct: 167 ttggtggagcttttgcccccaagccatcttctggtcctcacaagtccagggagtgcctgc 226

                                                   
Query: 121 ctctgatcctaatnctgaggaacagactgaaatatgctct 160
           |||||||||| ||  | |||||||| || || ||||||||
Sbjct: 227 ctctgatcctcattatcaggaacaggctcaagtatgctct 266

---

>dbj|AK061776.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D06, full
           insert sequence
          Length = 1079

 Score =  180 bits (91), Expect = 9e-43
 Identities = 142/160 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
           |||||| ||||||||||||||||||||||||||| ||    ||||||||||| |||||||
Sbjct: 99  ggggtttgaagaagcatctgaagaggctcaatgcgcccaagcattggatgctcgacaagc 158

                                                                       
Query: 61  ttggtggagcttttgcccccaagccatcatctggtcctnacaaggccagggaatgcctgc 120
           |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||||||
Sbjct: 159 ttggtggagcttttgcccccaagccatcttctggtcctcacaagtccagggagtgcctgc 218

                                                   
Query: 121 ctctgatcctaatnctgaggaacagactgaaatatgctct 160
           |||||||||| ||  | |||||||| || || ||||||||
Sbjct: 219 ctctgatcctcattatcaggaacaggctcaagtatgctct 258

---

>emb|X79300.1|GHRS4E G.hirsutum (DPL 62) mRNA for ribosomal protein small subunit 4e
          Length = 1090

 Score =  157 bits (79), Expect = 1e-35
 Identities = 134/153 (87%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||
Sbjct: 70  gaagaaacatttgaagaggctcaatgcccctaggcattggatgcttgacaagcttggtgg 129

                                                                       
Query: 68  agcttttgcccccaagccatcatctggtcctnacaaggccagggaatgcctgcctctgat 127
            |||||||| ||||||||||||||||||||| ||||| | ||||||||| ||||  ||||
Sbjct: 130 tgcttttgcacccaagccatcatctggtcctcacaagtctagggaatgcttgccattgat 189

                                            
Query: 128 cctaatnctgaggaacagactgaaatatgctct 160
           ||| || ||| | |||||| |||||||||||||
Sbjct: 190 cctcattctgcgaaacagattgaaatatgctct 222

---

>gb|AF071891.1|AF071891 Prunus armeniaca 40S ribosomal protein S4 (RPS4) mRNA, complete cds
          Length = 1086

 Score =  147 bits (74), Expect = 1e-32
 Identities = 135/156 (86%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           ||||||||||||||||||||||||||||||    ||||||||||| ||||||||||| ||
Sbjct: 61  gaagaagcatctgaagaggctcaatgccccaaagcattggatgctcgacaagcttggggg 120

                                                                       
Query: 68  agcttttgcccccaagccatcatctggtcctnacaaggccagggaatgcctgcctctgat 127
            |||||||| ||||||||||||||||| ||| ||||  | ||||| ||||| || |||||
Sbjct: 121 tgcttttgctcccaagccatcatctgggcctcacaaatctagggagtgccttccactgat 180

                                               
Query: 128 cctaatnctgaggaacagactgaaatatgctctcac 163
           ||| || |||||||||||  |||| |||||||||||
Sbjct: 181 cctcatcctgaggaacaggttgaagtatgctctcac 216

---

>dbj|AK071862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123J20, full
           insert sequence
          Length = 1162

 Score =  133 bits (67), Expect = 2e-28
 Identities = 136/160 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
           |||||| ||||||||||||||||||||||||||||||    ||||||||| |||||||||
Sbjct: 106 ggggtttgaagaagcatctgaagaggctcaatgcccccagccattggatgtttgacaagc 165

                                                                       
Query: 61  ttggtggagcttttgcccccaagccatcatctggtcctnacaaggccagggaatgcctgc 120
           |||||||||| ||||| |||||||| || ||||||||  |||| ||  |||| ||| |||
Sbjct: 166 ttggtggagcatttgcacccaagccttcttctggtccccacaaagctcgggagtgcttgc 225

                                                   
Query: 121 ctctgatcctaatnctgaggaacagactgaaatatgctct 160
           || ||||||| || || ||||||||  |||| ||||||||
Sbjct: 226 ctttgatccttatcctcaggaacaggttgaagtatgctct 265

---

>gb|AF013487.1|AF013487 Zea mays ribosomal protein S4 type I (rps4) mRNA, complete cds
          Length = 1013

 Score =  133 bits (67), Expect = 2e-28
 Identities = 131/153 (85%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||||||| |||||||||||||||||||    ||||||||||| ||||||||||| ||
Sbjct: 88  gaagaagcatttgaagaggctcaatgcccccaagcattggatgctggacaagcttggcgg 147

                                                                       
Query: 68  agcttttgcccccaagccatcatctggtcctnacaaggccagggaatgcctgcctctgat 127
           ||||||||| ||||||||||| ||||| ||| ||||| | ||||| |||||||| |||||
Sbjct: 148 agcttttgctcccaagccatcttctggacctcacaagtctagggagtgcctgccactgat 207

                                            
Query: 128 cctaatnctgaggaacagactgaaatatgctct 160
           ||| ||  | |||||||| || || ||||||||
Sbjct: 208 cctcatcatcaggaacaggctcaagtatgctct 240

---

>ref|NM_193994.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 768

 Score =  127 bits (64), Expect = 1e-26
 Identities = 108/123 (87%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||||||||| |||||||||||||| ||    || |||||||| |||||||| || ||
Sbjct: 15  gaagaagcatctcaagaggctcaatgcgcccaagcactggatgctcgacaagctcggcgg 74

                                                                       
Query: 68  agcttttgcccccaagccatcatctggtcctnacaaggccagggaatgcctgcctctgat 127
           ||||||||||||||||||||| ||||| ||| ||||| |||||||||||||||| |||||
Sbjct: 75  agcttttgcccccaagccatcgtctggacctcacaagtccagggaatgcctgcccctgat 134

              
Query: 128 cct 130
           |||
Sbjct: 135 cct 137

---

>dbj|AK061826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C06, full
           insert sequence
          Length = 1035

 Score =  127 bits (64), Expect = 1e-26
 Identities = 108/123 (87%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||||||||| |||||||||||||| ||    || |||||||| |||||||| || ||
Sbjct: 102 gaagaagcatctcaagaggctcaatgcgcccaagcactggatgctcgacaagctcggcgg 161

                                                                       
Query: 68  agcttttgcccccaagccatcatctggtcctnacaaggccagggaatgcctgcctctgat 127
           ||||||||||||||||||||| ||||| ||| ||||| |||||||||||||||| |||||
Sbjct: 162 agcttttgcccccaagccatcgtctggacctcacaagtccagggaatgcctgcccctgat 221

              
Query: 128 cct 130
           |||
Sbjct: 222 cct 224

---

>gb|BT017558.1| Zea mays clone EL01N0424H12.c mRNA sequence
          Length = 1145

 Score =  125 bits (63), Expect = 4e-26
 Identities = 130/153 (84%)
 Strand = Plus / Minus

                                                                        
Query: 8    gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
            |||||||||| |||||||||||||||| ||    ||||||||||| ||||||||||| ||
Sbjct: 1036 gaagaagcatttgaagaggctcaatgcgcccaagcattggatgctggacaagcttggcgg 977

                                                                        
Query: 68   agcttttgcccccaagccatcatctggtcctnacaaggccagggaatgcctgcctctgat 127
            ||||||||| ||||||||||| ||||| ||| ||||| | ||||| |||||||| |||||
Sbjct: 976  agcttttgctcccaagccatcttctggacctcacaagtctagggagtgcctgccactgat 917

                                             
Query: 128  cctaatnctgaggaacagactgaaatatgctct 160
            ||| ||  | |||||||| || || ||||||||
Sbjct: 916  cctcattatcaggaacaggctcaagtatgctct 884

---

>gb|BT016261.1| Zea mays clone Contig94 mRNA sequence
          Length = 1116

 Score =  125 bits (63), Expect = 4e-26
 Identities = 130/153 (84%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||||||  |||||||||||||||| ||    ||||||||||| ||||||||||| ||
Sbjct: 120 gaagaagcacttgaagaggctcaatgcgcccaagcattggatgctcgacaagcttggcgg 179

                                                                       
Query: 68  agcttttgcccccaagccatcatctggtcctnacaaggccagggaatgcctgcctctgat 127
           ||||||||| ||||||||||| ||||| ||| ||||| ||||||| ||||| ||||||||
Sbjct: 180 agcttttgctcccaagccatcttctggacctcacaagtccagggagtgccttcctctgat 239

                                            
Query: 128 cctaatnctgaggaacagactgaaatatgctct 160
           ||| ||  | |||||||| || || ||||||||
Sbjct: 240 cctcatcatcaggaacaggctcaagtatgctct 272

---

>gb|AY525608.1| Zea mays ribosomal protein S4 mRNA, complete cds
          Length = 1037

 Score =  125 bits (63), Expect = 4e-26
 Identities = 130/153 (84%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||||||| |||||||||||||||| ||    ||||||||||| ||||||||||| ||
Sbjct: 86  gaagaagcatttgaagaggctcaatgcgcccaagcattggatgctggacaagcttggcgg 145

                                                                       
Query: 68  agcttttgcccccaagccatcatctggtcctnacaaggccagggaatgcctgcctctgat 127
           ||||||||| ||||||||||| ||||| ||| ||||| | ||||| |||||||| |||||
Sbjct: 146 agcttttgctcccaagccatcttctggacctcacaagtctagggagtgcctgccactgat 205

                                            
Query: 128 cctaatnctgaggaacagactgaaatatgctct 160
           ||| ||  | |||||||| || || ||||||||
Sbjct: 206 cctcatcatcaggaacaggctcaagtatgctct 238

---

>gb|AF015522.1|AF015522 Zea mays ribsomal protein S4 (rps4) mRNA, complete cds
          Length = 1090

 Score =  125 bits (63), Expect = 4e-26
 Identities = 130/153 (84%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||||||  |||||||||||||||| ||    ||||||||||| ||||||||||| ||
Sbjct: 99  gaagaagcacttgaagaggctcaatgcgcccaagcattggatgctcgacaagcttggcgg 158

                                                                       
Query: 68  agcttttgcccccaagccatcatctggtcctnacaaggccagggaatgcctgcctctgat 127
           ||||||||| ||||||||||| ||||| ||| ||||| ||||||| ||||| ||||||||
Sbjct: 159 agcttttgctcccaagccatcttctggacctcacaagtccagggagtgccttcctctgat 218

                                            
Query: 128 cctaatnctgaggaacagactgaaatatgctct 160
           ||| ||  | |||||||| || || ||||||||
Sbjct: 219 cctcatcatcaggaacaggctcaagtatgctct 251

---

>emb|X76651.1|STRPS4 S.tuberosum (Desiree) mRNA for ribosomal protein S4
          Length = 966

 Score =  113 bits (57), Expect = 2e-22
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 62
           |||| ||||||||||||||||||||||||||||||    |||||||||||||| || |||
Sbjct: 59  ggtttgaagaagcatctgaagaggctcaatgccccaaagcattggatgcttgataaactt 118

                                           
Query: 63  ggtggagcttttgcccccaagccatcatctgg 94
           |||||||| ||||||||||||||||| |||||
Sbjct: 119 ggtggagcatttgcccccaagccatcctctgg 150

---

>gb|DQ268839.1| Solanum tuberosum clone 130D11 40S ribosomal protein S4-like
           protein mRNA, complete cds
          Length = 1052

 Score =  105 bits (53), Expect = 4e-20
 Identities = 82/92 (89%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 62
           |||| ||||||||||||||||||||||||||||||    |||||||||||||| || |||
Sbjct: 42  ggtttgaagaagcatctgaagaggctcaatgccccaaagcattggatgcttgataaactt 101

                                           
Query: 63  ggtggagcttttgcccccaagccatcatctgg 94
           |||||||| ||||| ||||||||||| |||||
Sbjct: 102 ggtggagcatttgctcccaagccatcctctgg 133

---

>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07,
             complete sequence
          Length = 159932

 Score =  103 bits (52), Expect = 2e-19
 Identities = 69/75 (92%)
 Strand = Plus / Plus

                                                                         
Query: 1     ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
             |||||| ||||||||||||||||||||||||||||||    |||||||||||||||||||
Sbjct: 79427 ggggtttgaagaagcatctgaagaggctcaatgcccccagccattggatgcttgacaagc 79486

                            
Query: 61    ttggtggagcttttg 75
             |||||||||| ||||
Sbjct: 79487 ttggtggagcatttg 79501

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  103 bits (52), Expect = 2e-19
 Identities = 69/75 (92%)
 Strand = Plus / Plus

                                                                            
Query: 1        ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
                |||||| ||||||||||||||||||||||||||||||    |||||||||||||||||||
Sbjct: 17549622 ggggtttgaagaagcatctgaagaggctcaatgcccccagccattggatgcttgacaagc 17549681

                               
Query: 61       ttggtggagcttttg 75
                |||||||||| ||||
Sbjct: 17549682 ttggtggagcatttg 17549696

---

>dbj|AB232685.1| Panax ginseng mRNA for ribosomal protein S4, complete cds
          Length = 1105

 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 130/158 (82%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 62
           |||| |||||||||| |||||||||||||||||||    ||||||||||| || || |||
Sbjct: 97  ggtttgaagaagcatttgaagaggctcaatgcccctaagcattggatgctcgataaactt 156

                                                                       
Query: 63  ggtggagcttttgcccccaagccatcatctggtcctnacaaggccagggaatgcctgcct 122
           ||||| || ||||| |||||||| |||||||| ||  | ||  |||||||||||||||||
Sbjct: 157 ggtggtgcatttgctcccaagccttcatctggaccccataaatccagggaatgcctgcct 216

                                                 
Query: 123 ctgatcctaatnctgaggaacagactgaaatatgctct 160
            |||| || ||  || | ||||| ||||| ||||||||
Sbjct: 217 ttgattcttattttgcgaaacaggctgaagtatgctct 254

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                          
Query: 1      ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
              |||||| ||||||||||||||||||||||||||| ||    ||||||||||| |||||||
Sbjct: 318195 ggggtttgaagaagcatctgaagaggctcaatgcgcccaagcattggatgctcgacaagc 318136

                             
Query: 61     ttggtggagcttttg 75
              |||||||||||||||
Sbjct: 318135 ttggtggagcttttg 318121



 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 75/86 (87%)
 Strand = Plus / Minus

                                                                          
Query: 75     gcccccaagccatcatctggtcctnacaaggccagggaatgcctgcctctgatcctaatn 134
              |||||||||||||| ||||||||| ||||| ||||||| ||||||||||||||||| || 
Sbjct: 318017 gcccccaagccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcatt 317958

                                        
Query: 135    ctgaggaacagactgaaatatgctct 160
               | |||||||| || || ||||||||
Sbjct: 317957 atcaggaacaggctcaagtatgctct 317932

---

>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1359_D06
          Length = 146805

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                         
Query: 1     ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
             |||||| ||||||||||||||||||||||||||| ||    ||||||||||| |||||||
Sbjct: 46979 ggggtttgaagaagcatctgaagaggctcaatgcgcccaagcattggatgctcgacaagc 46920

                            
Query: 61    ttggtggagcttttg 75
             |||||||||||||||
Sbjct: 46919 ttggtggagcttttg 46905



 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 75/86 (87%)
 Strand = Plus / Minus

                                                                         
Query: 75    gcccccaagccatcatctggtcctnacaaggccagggaatgcctgcctctgatcctaatn 134
             |||||||||||||| ||||||||| ||||| ||||||| ||||||||||||||||| || 
Sbjct: 46801 gcccccaagccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcatt 46742

                                       
Query: 135   ctgaggaacagactgaaatatgctct 160
              | |||||||| || || ||||||||
Sbjct: 46741 atcaggaacaggctcaagtatgctct 46716

---

>ref|NM_125228.3| Arabidopsis thaliana structural constituent of ribosome AT5G58420
           mRNA, complete cds
          Length = 1080

 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
           |||||| ||||||||||||||||||||| ||||| ||    ||||||||||||||||| |
Sbjct: 101 ggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgcttgacaaac 160

                                             
Query: 61  ttggtggagcttttgcccccaagccatcatctgg 94
           ||||||| || |||||||| ||||| || |||||
Sbjct: 161 ttggtggtgcatttgccccaaagccgtcttctgg 194

---

>ref|XM_475130.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 738

 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 95/113 (84%)
 Strand = Plus / Plus

                                                                       
Query: 48  atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctnacaaggcc 107
           ||||||||||||||||||||||| ||||| |||||||| || ||||||||  |||| || 
Sbjct: 1   atgcttgacaagcttggtggagcatttgcacccaagccttcttctggtccccacaaagct 60

                                                                
Query: 108 agggaatgcctgcctctgatcctaatnctgaggaacagactgaaatatgctct 160
            |||| ||| ||||| ||||||| || || ||||||||  |||| ||||||||
Sbjct: 61  cgggagtgcttgcctttgatccttatcctcaggaacaggttgaagtatgctct 113

---

>gb|AY143834.1| Arabidopsis thaliana At5g58420/mqj2_10 mRNA, complete cds
          Length = 789

 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
           |||||| ||||||||||||||||||||| ||||| ||    ||||||||||||||||| |
Sbjct: 8   ggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgcttgacaaac 67

                                             
Query: 61  ttggtggagcttttgcccccaagccatcatctgg 94
           ||||||| || |||||||| ||||| || |||||
Sbjct: 68  ttggtggtgcatttgccccaaagccgtcttctgg 101

---

>gb|AY070467.1| Arabidopsis thaliana AT5g58420/mqj2_10 mRNA, complete cds
          Length = 995

 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
           |||||| ||||||||||||||||||||| ||||| ||    ||||||||||||||||| |
Sbjct: 81  ggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgcttgacaaac 140

                                             
Query: 61  ttggtggagcttttgcccccaagccatcatctgg 94
           ||||||| || |||||||| ||||| || |||||
Sbjct: 141 ttggtggtgcatttgccccaaagccgtcttctgg 174

---

>gb|AF428285.1|AF428285 Arabidopsis thaliana AT5g58420/mqj2_10 mRNA, complete cds
          Length = 1005

 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
           |||||| ||||||||||||||||||||| ||||| ||    ||||||||||||||||| |
Sbjct: 92  ggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgcttgacaaac 151

                                             
Query: 61  ttggtggagcttttgcccccaagccatcatctgg 94
           ||||||| || |||||||| ||||| || |||||
Sbjct: 152 ttggtggtgcatttgccccaaagccgtcttctgg 185

---

>emb|BX832274.1|CNS09ZPH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH62ZE09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 978

 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
           |||||| ||||||||||||||||||||| ||||| ||    ||||||||||||||||| |
Sbjct: 101 ggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgcttgacaaac 160

                                             
Query: 61  ttggtggagcttttgcccccaagccatcatctgg 94
           ||||||| || |||||||| ||||| || |||||
Sbjct: 161 ttggtggtgcatttgccccaaagccgtcttctgg 194

---

>emb|BX830283.1|CNS09ZZO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB70ZD03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 988

 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
           |||||| ||||||||||||||||||||| ||||| ||    ||||||||||||||||| |
Sbjct: 72  ggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgcttgacaaac 131

                                             
Query: 61  ttggtggagcttttgcccccaagccatcatctgg 94
           ||||||| || |||||||| ||||| || |||||
Sbjct: 132 ttggtggtgcatttgccccaaagccgtcttctgg 165

---

>emb|BX832264.1|CNS09ZM6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH61ZG11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 997

 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
           |||||| ||||||||||||||||||||| ||||| ||    ||||||||||||||||| |
Sbjct: 81  ggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgcttgacaaac 140

                                             
Query: 61  ttggtggagcttttgcccccaagccatcatctgg 94
           ||||||| || |||||||| ||||| || |||||
Sbjct: 141 ttggtggtgcatttgccccaaagccgtcttctgg 174

---

>gb|AY086206.1| Arabidopsis thaliana clone 22434 mRNA, complete sequence
          Length = 1010

 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
           |||||| ||||||||||||||||||||| ||||| ||    ||||||||||||||||| |
Sbjct: 96  ggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgcttgacaaac 155

                                             
Query: 61  ttggtggagcttttgcccccaagccatcatctgg 94
           ||||||| || |||||||| ||||| || |||||
Sbjct: 156 ttggtggtgcatttgccccaaagccgtcttctgg 189

---

>gb|AY085205.1| Arabidopsis thaliana clone 13813 mRNA, complete sequence
          Length = 1011

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||||||||| |||||||||||||||||    ||||||||||||||||| ||||||||
Sbjct: 42  gaagaagcatctaaagaggctcaatgcccctaagcattggatgcttgacaaacttggtgg 101

                                                
Query: 68  agcttttgcccccaagccatcatctggtcctnacaag 104
            || || || ||||| ||||| ||||| ||| |||||
Sbjct: 102 tgccttcgctcccaaaccatcttctggacctcacaag 138

---

>ref|NM_127291.2| Arabidopsis thaliana structural constituent of ribosome AT2G17360
           mRNA, complete cds
          Length = 1074

 Score = 81.8 bits (41), Expect = 6e-13
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 62
           |||| |||||||||| |||||||||||||||| ||    |||||||||||||| || |||
Sbjct: 123 ggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgcttgataaactt 182

                                           
Query: 63  ggtggagcttttgcccccaagccatcatctgg 94
           ||||| || |||||||||||||| || |||||
Sbjct: 183 ggtggtgcctttgcccccaagccgtcttctgg 214

---

>gb|AY062983.1| Arabidopsis thaliana putative ribosomal protein S4 (At2g17360)
           mRNA, complete cds
          Length = 817

 Score = 81.8 bits (41), Expect = 6e-13
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 62
           |||| |||||||||| |||||||||||||||| ||    |||||||||||||| || |||
Sbjct: 10  ggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgcttgataaactt 69

                                           
Query: 63  ggtggagcttttgcccccaagccatcatctgg 94
           ||||| || |||||||||||||| || |||||
Sbjct: 70  ggtggtgcctttgcccccaagccgtcttctgg 101

---

>gb|AY035131.1| Arabidopsis thaliana putative ribosomal protein S4 (At2g17360)
           mRNA, complete cds
          Length = 1032

 Score = 81.8 bits (41), Expect = 6e-13
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 62
           |||| |||||||||| |||||||||||||||| ||    |||||||||||||| || |||
Sbjct: 82  ggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgcttgataaactt 141

                                           
Query: 63  ggtggagcttttgcccccaagccatcatctgg 94
           ||||| || |||||||||||||| || |||||
Sbjct: 142 ggtggtgcctttgcccccaagccgtcttctgg 173

---

>gb|AY064625.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 813

 Score = 81.8 bits (41), Expect = 6e-13
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 62
           |||| |||||||||| |||||||||||||||| ||    |||||||||||||| || |||
Sbjct: 10  ggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgcttgataaactt 69

                                           
Query: 63  ggtggagcttttgcccccaagccatcatctgg 94
           ||||| || |||||||||||||| || |||||
Sbjct: 70  ggtggtgcctttgcccccaagccgtcttctgg 101

---

>gb|AF370469.1|AF370469 Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 1034

 Score = 81.8 bits (41), Expect = 6e-13
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 62
           |||| |||||||||| |||||||||||||||| ||    |||||||||||||| || |||
Sbjct: 83  ggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgcttgataaactt 142

                                           
Query: 63  ggtggagcttttgcccccaagccatcatctgg 94
           ||||| || |||||||||||||| || |||||
Sbjct: 143 ggtggtgcctttgcccccaagccgtcttctgg 174

---

>emb|BX820506.1|CNS0A8QA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH41ZE09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1000

 Score = 81.8 bits (41), Expect = 6e-13
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 62
           |||| |||||||||| |||||||||||||||| ||    |||||||||||||| || |||
Sbjct: 68  ggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgcttgataaactt 127

                                           
Query: 63  ggtggagcttttgcccccaagccatcatctgg 94
           ||||| || |||||||||||||| || |||||
Sbjct: 128 ggtggtgcctttgcccccaagccgtcttctgg 159

---

>emb|BX818868.1|CNS0A8UP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB21ZB04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1007

 Score = 81.8 bits (41), Expect = 6e-13
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 62
           |||| |||||||||| |||||||||||||||| ||    |||||||||||||| || |||
Sbjct: 75  ggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgcttgataaactt 134

                                           
Query: 63  ggtggagcttttgcccccaagccatcatctgg 94
           ||||| || |||||||||||||| || |||||
Sbjct: 135 ggtggtgcctttgcccccaagccgtcttctgg 166

---

>emb|BX818793.1|CNS0A8YY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB13ZG07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 966

 Score = 81.8 bits (41), Expect = 6e-13
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 62
           |||| |||||||||| |||||||||||||||| ||    |||||||||||||| || |||
Sbjct: 72  ggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgcttgataaactt 131

                                           
Query: 63  ggtggagcttttgcccccaagccatcatctgg 94
           ||||| || |||||||||||||| || |||||
Sbjct: 132 ggtggtgcctttgcccccaagccgtcttctgg 163

---

>gb|AY084230.1| Arabidopsis thaliana clone 10042 mRNA, complete sequence
          Length = 1023

 Score = 81.8 bits (41), Expect = 6e-13
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 62
           |||| |||||||||| |||||||||||||||| ||    |||||||||||||| || |||
Sbjct: 123 ggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgcttgataaactt 182

                                           
Query: 63  ggtggagcttttgcccccaagccatcatctgg 94
           ||||| || |||||||||||||| || |||||
Sbjct: 183 ggtggtgcctttgcccccaagccgtcttctgg 214

---

>ref|NM_001036769.1| Arabidopsis thaliana structural constituent of ribosome AT5G07090
           transcript variant AT5G07090.2 mRNA, complete cds
          Length = 1174

 Score = 75.8 bits (38), Expect = 4e-11
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||||||||| |||||||||||||| ||    ||||||||||||||||| ||||||||
Sbjct: 127 gaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggtgg 186

                                                
Query: 68  agcttttgcccccaagccatcatctggtcctnacaag 104
            || || || ||||| ||||| ||||| ||| |||||
Sbjct: 187 tgccttcgctcccaaaccatcttctggacctcacaag 223

---

>ref|NM_120791.2| Arabidopsis thaliana structural constituent of ribosome AT5G07090
           transcript variant AT5G07090.1 mRNA, complete cds
          Length = 1088

 Score = 75.8 bits (38), Expect = 4e-11
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||||||||| |||||||||||||| ||    ||||||||||||||||| ||||||||
Sbjct: 42  gaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggtgg 101

                                                
Query: 68  agcttttgcccccaagccatcatctggtcctnacaag 104
            || || || ||||| ||||| ||||| ||| |||||
Sbjct: 102 tgccttcgctcccaaaccatcttctggacctcacaag 138

---

>gb|AY079417.1| Arabidopsis thaliana putative 40S ribosomal protein S4 (At5g07090)
           mRNA, complete cds
          Length = 820

 Score = 75.8 bits (38), Expect = 4e-11
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||||||||| |||||||||||||| ||    ||||||||||||||||| ||||||||
Sbjct: 15  gaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggtgg 74

                                                
Query: 68  agcttttgcccccaagccatcatctggtcctnacaag 104
            || || || ||||| ||||| ||||| ||| |||||
Sbjct: 75  tgccttcgctcccaaaccatcttctggacctcacaag 111

---

>gb|AY050933.1| Arabidopsis thaliana putative 40S ribosomal protein S4 (At5g07090)
           mRNA, complete cds
          Length = 1059

 Score = 75.8 bits (38), Expect = 4e-11
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||||||||| |||||||||||||| ||    ||||||||||||||||| ||||||||
Sbjct: 39  gaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggtgg 98

                                                
Query: 68  agcttttgcccccaagccatcatctggtcctnacaag 104
            || || || ||||| ||||| ||||| ||| |||||
Sbjct: 99  tgccttcgctcccaaaccatcttctggacctcacaag 135

---

>gb|AY093715.1| Arabidopsis thaliana AT5g07090/T28J14_30 mRNA, complete cds
          Length = 789

 Score = 75.8 bits (38), Expect = 4e-11
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||||||||| |||||||||||||| ||    ||||||||||||||||| ||||||||
Sbjct: 15  gaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggtgg 74

                                                
Query: 68  agcttttgcccccaagccatcatctggtcctnacaag 104
            || || || ||||| ||||| ||||| ||| |||||
Sbjct: 75  tgccttcgctcccaaaccatcttctggacctcacaag 111

---

>gb|AY070769.1| Arabidopsis thaliana AT5g07090/T28J14_30 mRNA, complete cds
          Length = 1008

 Score = 75.8 bits (38), Expect = 4e-11
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||||||||| |||||||||||||| ||    ||||||||||||||||| ||||||||
Sbjct: 39  gaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggtgg 98

                                                
Query: 68  agcttttgcccccaagccatcatctggtcctnacaag 104
            || || || ||||| ||||| ||||| ||| |||||
Sbjct: 99  tgccttcgctcccaaaccatcttctggacctcacaag 135

---

>emb|BX832664.1|CNS09ZT5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH87ZG07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 976

 Score = 75.8 bits (38), Expect = 4e-11
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||||||||| |||||||||||||| ||    ||||||||||||||||| ||||||||
Sbjct: 9   gaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggtgg 68

                                                
Query: 68  agcttttgcccccaagccatcatctggtcctnacaag 104
            || || || ||||| ||||| ||||| ||| |||||
Sbjct: 69  tgccttcgctcccaaaccatcttctggacctcacaag 105

---

>emb|BX832452.1|CNS09ZTE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH74ZD04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 942

 Score = 75.8 bits (38), Expect = 4e-11
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||||||||| |||||||||||||| ||    ||||||||||||||||| ||||||||
Sbjct: 13  gaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggtgg 72

                                                
Query: 68  agcttttgcccccaagccatcatctggtcctnacaag 104
            || || || ||||| ||||| ||||| ||| |||||
Sbjct: 73  tgccttcgctcccaaaccatcttctggacctcacaag 109

---

>emb|BX832256.1|CNS09ZVR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH61ZC05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 952

 Score = 75.8 bits (38), Expect = 4e-11
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||||||||| |||||||||||||| ||    ||||||||||||||||| ||||||||
Sbjct: 4   gaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggtgg 63

                                                
Query: 68  agcttttgcccccaagccatcatctggtcctnacaag 104
            || || || ||||| ||||| ||||| ||| |||||
Sbjct: 64  tgccttcgctcccaaaccatcttctggacctcacaag 100

---

>emb|BX832253.1|CNS09ZUO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH61ZB04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 945

 Score = 75.8 bits (38), Expect = 4e-11
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||||||||| |||||||||||||| ||    ||||||||||||||||| ||||||||
Sbjct: 13  gaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggtgg 72

                                                
Query: 68  agcttttgcccccaagccatcatctggtcctnacaag 104
            || || || ||||| ||||| ||||| ||| |||||
Sbjct: 73  tgccttcgctcccaaaccatcttctggacctcacaag 109

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                        
Query: 75       gcccccaagccatcatctggtcctnacaaggccagggaatgcctgcctctgatcct 130
                |||||||||||||| ||||| ||| ||||| |||||||||||||||| ||||||||
Sbjct: 14497061 gcccccaagccatcgtctggacctcacaagtccagggaatgcctgcccctgatcct 14497116



 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                            
Query: 8        gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
                |||||||||||| |||||||||||||| ||    || |||||||| |||||||| || ||
Sbjct: 14496886 gaagaagcatctcaagaggctcaatgcgcccaagcactggatgctcgacaagctcggcgg 14496945

                        
Query: 68       agcttttg 75
                ||||||||
Sbjct: 14496946 agcttttg 14496953

---

>emb|BX831856.1|CNS09ZNQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH34ZE09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 934

 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                       
Query: 9   aagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgga 68
           |||||||||||||||||||||||||| ||    | ||||||||||||||| |||||||| 
Sbjct: 14  aagaagcatctgaagaggctcaatgctcctgagcgttggatgcttgacaaacttggtggt 73

                                               
Query: 69  gcttttgcccccaagccatcatctggtcctnacaag 104
           || || || ||||| ||||| ||||| ||| |||||
Sbjct: 74  gccttcgctcccaaaccatcttctggacctcacaag 109

---

>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0514H03
          Length = 167230

 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                     
Query: 75    gcccccaagccatcatctggtcctnacaaggccagggaatgcctgcctctgatcct 130
             |||||||||||||| ||||| ||| ||||| |||||||||||||||| ||||||||
Sbjct: 56374 gcccccaagccatcgtctggacctcacaagtccagggaatgcctgcccctgatcct 56429



 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                         
Query: 8     gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
             |||||||||||| |||||||||||||| ||    || |||||||| |||||||| || ||
Sbjct: 56199 gaagaagcatctcaagaggctcaatgcgcccaagcactggatgctcgacaagctcggcgg 56258

                     
Query: 68    agcttttg 75
             ||||||||
Sbjct: 56259 agcttttg 56266

---

>dbj|AB025632.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQJ2
          Length = 51440

 Score = 71.9 bits (36), Expect = 6e-10
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagc 60
            |||||| ||||||||||||||||||||| ||||| ||    ||||||||||||||||| |
Sbjct: 5951 ggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgcttgacaaac 6010

                   
Query: 61   ttggtgg 67
            |||||||
Sbjct: 6011 ttggtgg 6017

---

>gb|AF528526.1| Glycine max 40S ribosomal S4 protein mRNA, complete cds
          Length = 1054

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 74/87 (85%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||||||||| |||||||||||||| ||    ||||||||||||||||| || |||||
Sbjct: 112 gaagaagcatctcaagaggctcaatgctcctaagcattggatgcttgacaaactgggtgg 171

                                      
Query: 68  agcttttgcccccaagccatcatctgg 94
            || ||||| ||||| || ||||||||
Sbjct: 172 tgcatttgcgcccaaaccctcatctgg 198

---

>gb|AC126779.19| Medicago truncatula clone mth2-34m14, complete sequence
          Length = 128856

 Score = 67.9 bits (34), Expect = 9e-09
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                         
Query: 3     ggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 62
             |||| |||||||||| |||||||||||||||||||    |||||||||||||||||  | 
Sbjct: 82054 ggtttgaagaagcatttgaagaggctcaatgcccccaagcattggatgcttgacaaattg 82113

                          
Query: 63    ggtggagcttttg 75
             ||||| |||||||
Sbjct: 82114 ggtggtgcttttg 82126

---

>emb|AL163652.1|ATT28J14 Arabidopsis thaliana DNA chromosome 5, BAC clone T28J14 (ESSA
            project)
          Length = 104607

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                        
Query: 8    gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
            |||||||||||| |||||||||||||| ||    ||||||||||||||||| ||||||||
Sbjct: 6996 gaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggtgg 7055

---

>dbj|AB010697.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOJ9
          Length = 86380

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                         
Query: 8     gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
             |||||||||||| |||||||||||||| ||    ||||||||||||||||| ||||||||
Sbjct: 81719 gaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggtgg 81778

---

>gb|AC146554.5| Medicago truncatula clone mth2-9l7, complete sequence
          Length = 135334

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                         
Query: 75    gcccccaagccatcatctggtcctnacaaggccagggaatgcctgcctctgatcctaatn 134
             ||||| ||||| |||||||| ||  ||||  | ||||| ||||| ||| ||||||| || 
Sbjct: 11566 gccccaaagccgtcatctggaccacacaaatctagggagtgccttcctttgatccttatc 11507

                                          
Query: 135   ctgaggaacagactgaaatatgctctcac 163
              ||||||||||||| ||||||||||||||
Sbjct: 11506 ttgaggaacagactaaaatatgctctcac 11478



 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                         
Query: 3     ggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 62
             |||| |||||| ||| ||||| |||||||||| ||    |||||||||||||| ||||||
Sbjct: 11737 ggtttgaagaaacatttgaagcggctcaatgctccaaaacattggatgcttgataagctt 11678

                  
Query: 63    ggtgg 67
             |||||
Sbjct: 11677 ggtgg 11673

---

>gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II section 100 of 255 of the complete
             sequence. Sequence from clones T23A1, F5J6, MJB20
          Length = 76170

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                         
Query: 3     ggttngaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 62
             |||| |||||||||| |||||||||||||||| ||    |||||||||||||| || |||
Sbjct: 47817 ggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgcttgataaactt 47876

                  
Query: 63    ggtgg 67
             |||||
Sbjct: 47877 ggtgg 47881

---

>gb|BT014201.1| Lycopersicon esculentum clone 133378R, mRNA sequence
          Length = 1292

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgg 67
           |||||| ||| | |||||||||||||| ||    |||||||||||||| || || || ||
Sbjct: 95  gaagaaacatttaaagaggctcaatgcgcctaagcattggatgcttgataaactcggagg 154

                                         
Query: 68  agcttttgcccccaagccatcatctggtcc 97
            |||||||| |||||||| || ||||||||
Sbjct: 155 tgcttttgctcccaagccttcttctggtcc 184

---

>ref|XM_986316.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X
           isoform (LOC229746), mRNA
          Length = 908

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 126 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 185

                 
Query: 151 aatatg 156
           ||||||
Sbjct: 186 aatatg 191

---

>ref|XM_124146.6| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X
           isoform (LOC229746), mRNA
          Length = 908

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 126 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 185

                 
Query: 151 aatatg 156
           ||||||
Sbjct: 186 aatatg 191

---

>gb|AC131731.4| Mus musculus BAC clone RP23-117K10 from 3, complete sequence
          Length = 200232

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                         
Query: 91    ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
             |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 17770 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 17829

                   
Query: 151   aatatg 156
             ||||||
Sbjct: 17830 aatatg 17835

---

>gb|AC140323.3| Mus musculus BAC clone RP24-325G15 from 3, complete sequence
          Length = 182942

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                          
Query: 91     ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
              |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 175838 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 175897

                    
Query: 151    aatatg 156
              ||||||
Sbjct: 175898 aatatg 175903

---

>gb|BC086560.1| Rattus norvegicus ribosomal protein S4, X-linked, mRNA (cDNA clone
           MGC:105788 IMAGE:7303578), complete cds
          Length = 915

 Score = 46.1 bits (23), Expect = 0.033
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 108 agggaatgcctgcctctgatcctaatnctgaggaacagactgaaatatgc 157
           ||||||||||||||||||||| |  | || ||||||||||| || |||||
Sbjct: 115 agggaatgcctgcctctgatcattttcctaaggaacagacttaagtatgc 164

---

>ref|NM_001007600.1| Rattus norvegicus ribosomal protein S4, X-linked (Rps4x), mRNA
          Length = 915

 Score = 46.1 bits (23), Expect = 0.033
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 108 agggaatgcctgcctctgatcctaatnctgaggaacagactgaaatatgc 157
           ||||||||||||||||||||| |  | || ||||||||||| || |||||
Sbjct: 115 agggaatgcctgcctctgatcattttcctaaggaacagacttaagtatgc 164

---

>emb|X14210.1|RNRPS4 Rat mRNA for ribosomal protein S4
          Length = 907

 Score = 46.1 bits (23), Expect = 0.033
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 108 agggaatgcctgcctctgatcctaatnctgaggaacagactgaaatatgc 157
           ||||||||||||||||||||| |  | || ||||||||||| || |||||
Sbjct: 136 agggaatgcctgcctctgatcattttcctaaggaacagacttaagtatgc 185

---

>dbj|D11087.1|HAMRPS4 Mesocricetus sp. RPS4 mRNA for ribosomal protein S4, complete cds
          Length = 970

 Score = 46.1 bits (23), Expect = 0.033
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 108 agggaatgcctgcctctgatcctaatnctgaggaacagactgaaatatgc 157
           |||||||| |||||||||||| |  | |||||||||||||| || |||||
Sbjct: 136 agggaatgtctgcctctgatcattttcctgaggaacagacttaagtatgc 185

---

>gb|AF511169.1| Sus scrofa clone UMNp272 microsatellite sequence
          Length = 299

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 57  aagcttggtggagcttttgccc 78
           ||||||||||||||||||||||
Sbjct: 203 aagcttggtggagcttttgccc 182

---

>gb|BC106152.1| Mus musculus ribosomal protein S4, X-linked, mRNA (cDNA clone
           MGC:118104 IMAGE:3669367), complete cds
          Length = 917

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 105 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 164

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 165 agtatgc 171

---

>gb|BC009100.1| Mus musculus ribosomal protein S4, X-linked, mRNA (cDNA clone
           MGC:6575 IMAGE:3482299), complete cds
          Length = 925

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 129 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 188

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 189 agtatgc 195

---

>ref|NM_009094.1| Mus musculus ribosomal protein S4, X-linked (Rps4x), mRNA
          Length = 885

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 104 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 163

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 164 agtatgc 170

---

>ref|XR_002810.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X
           isoform (LOC670119), mRNA
          Length = 962

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 115 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 174

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 175 agtatgc 181

---

>ref|XR_004627.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X
           isoform (LOC674228), mRNA
          Length = 959

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 115 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 174

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 175 agtatgc 181

---

>ref|XR_002019.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X
           isoform (LOC667398), mRNA
          Length = 962

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 115 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 174

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 175 agtatgc 181

---

>ref|XR_003920.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X
           isoform (LOC635803), mRNA
          Length = 788

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 109 gggaatgcctgcctctgatcctaatnctgaggaacagactgaaatatgctct 160
           |||||||||||||| ||||| |  | || ||||||||||| || ||||||||
Sbjct: 116 gggaatgcctgcctatgatcattttcctaaggaacagacttaagtatgctct 167

---

>ref|XM_001004419.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X
           isoform, transcript variant 2 (LOC668668), mRNA
          Length = 876

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 110 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 169

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 170 agtatgc 176

---

>ref|XM_001004416.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X
           isoform, transcript variant 1 (LOC668668), mRNA
          Length = 829

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 123 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 182

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 183 agtatgc 189

---

>ref|XM_916606.2| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X
           isoform, transcript variant 1 (LOC637070), mRNA
          Length = 888

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 123 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 182

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 183 agtatgc 189

---

>ref|XR_002186.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X
           isoform (LOC635803), mRNA
          Length = 788

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 109 gggaatgcctgcctctgatcctaatnctgaggaacagactgaaatatgctct 160
           |||||||||||||| ||||| |  | || ||||||||||| || ||||||||
Sbjct: 116 gggaatgcctgcctatgatcattttcctaaggaacagacttaagtatgctct 167

---

>gb|AC122379.4| Mus musculus BAC clone RP23-476A7 from chromosome 13, complete sequence
          Length = 171737

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                         
Query: 91    ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
             |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 23328 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 23387

                    
Query: 151   aatatgc 157
             | |||||
Sbjct: 23388 agtatgc 23394

---

>gb|AC102561.4| Mus musculus chromosome 7, clone RP23-201O19, complete sequence
          Length = 195549

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Minus

                                                                          
Query: 91     ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
              |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 117114 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 117055

                     
Query: 151    aatatgc 157
              | |||||
Sbjct: 117054 agtatgc 117048

---

>dbj|AK135369.1| Mus musculus 12 days embryo female mullerian duct includes
           surrounding region cDNA, RIKEN full-length enriched
           library, clone:6820407G10 product:ribosomal protein S4,
           X-linked, full insert sequence
          Length = 907

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 125 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 184

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 185 agtatgc 191

---

>dbj|AK153211.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830127J02 product:ribosomal
           protein S4, X-linked, full insert sequence
          Length = 897

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 116 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 175

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 176 agtatgc 182

---

>dbj|AK010921.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched
           library, clone:2510006L12 product:RIBOSOMAL PROTEIN S4X
           homolog [Cercopithecus aethiops], full insert sequence
          Length = 903

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 181

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 182 agtatgc 188

---

>dbj|AK010676.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:2410045N08 product:RIBOSOMAL PROTEIN S4X homolog
           [Cercopithecus aethiops], full insert sequence
          Length = 898

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 181

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 182 agtatgc 188

---

>dbj|AK010624.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:2410030O13 product:ribosomal protein S4, X-linked,
           full insert sequence
          Length = 906

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 125 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 184

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 185 agtatgc 191

---

>dbj|AK088410.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430016A18
           product:RIBOSOMAL PROTEIN S4X homolog [Cercopithecus
           aethiops], full insert sequence
          Length = 898

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 181

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 182 agtatgc 188

---

>dbj|AK002445.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
           library, clone:0610010B10 product:ribosomal protein S4,
           X-linked, full insert sequence
          Length = 903

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 181

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 182 agtatgc 188

---

>dbj|AK012429.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2700054P13 product:RIBOSOMAL
           PROTEIN S4X homolog [Cercopithecus aethiops], full
           insert sequence
          Length = 902

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 181

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 182 agtatgc 188

---

>dbj|AK014210.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched
           library, clone:3110053C10 product:ribosomal protein S4,
           X-linked, full insert sequence
          Length = 901

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 120 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 179

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 180 agtatgc 186

---

>gb|AC027653.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-166J14, complete
             sequence
          Length = 174990

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Minus

                                                                         
Query: 91    ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
             |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 83378 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 83319

                    
Query: 151   aatatgc 157
             | |||||
Sbjct: 83318 agtatgc 83312

---

>gb|AC124744.3| Mus musculus BAC clone RP23-223E16 from 13, complete sequence
          Length = 199767

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Minus

                                                                         
Query: 91    ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
             |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 16416 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 16357

                    
Query: 151   aatatgc 157
             | |||||
Sbjct: 16356 agtatgc 16350

---

>gb|BC089349.1| Mus musculus cDNA clone MGC:102174 IMAGE:6819603, complete cds
          Length = 909

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 107 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 166

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 167 agtatgc 173

---

>emb|BX539316.6| Mouse DNA sequence from clone RP24-216F23 on chromosome 7, complete
             sequence
          Length = 178673

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                 
Query: 109   gggaatgcctgcctctgatcctaatnctgaggaacagactgaaatatgctct 160
             |||||||||||||| ||||| |  | || ||||||||||| || ||||||||
Sbjct: 66672 gggaatgcctgcctatgatcattttcctaaggaacagacttaagtatgctct 66723

---

>emb|AL954850.12| Mouse DNA sequence from clone RP23-331B22 on chromosome X, complete
            sequence
          Length = 146713

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Minus

                                                                        
Query: 91   ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
            |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 7666 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 7607

                   
Query: 151  aatatgc 157
            | |||||
Sbjct: 7606 agtatgc 7600

---

>gb|BC089348.1| Mus musculus cDNA clone IMAGE:5709768, containing frame-shift
           errors
          Length = 919

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 107 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 166

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 167 agtatgc 173

---

>gb|M73436.1|MUSRSP4 Mouse ribosomal protein S4 (Rps4) mRNA, complete CDS
          Length = 885

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagactga 150
           |||||||| |||||   ||||||||||||||||| ||| |  | || ||||||||||| |
Sbjct: 104 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 163

                  
Query: 151 aatatgc 157
           | |||||
Sbjct: 164 agtatgc 170

---

>gb|AC137849.11| Mus musculus chromosome 1, clone RP24-124J24, complete sequence
          Length = 178764

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     ccaagccatcatctggtcct 98
              ||||||||||||||||||||
Sbjct: 127679 ccaagccatcatctggtcct 127660

---

>gb|AC110035.8| Mus musculus chromosome 1, clone RP23-237M24, complete sequence
          Length = 172559

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 79   ccaagccatcatctggtcct 98
            ||||||||||||||||||||
Sbjct: 1512 ccaagccatcatctggtcct 1493

---

>ref|XR_004017.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X
           isoform (LOC434180), mRNA
          Length = 892

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 48/58 (82%)
 Strand = Plus / Plus

                                                                     
Query: 91  ctggtcctnacaaggccagggaatgcctgcctctgatcctaatnctgaggaacagact 148
           |||||||| |||||   ||||||||||||||||| ||| |  | || |||||||||||
Sbjct: 124 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 181

---

>dbj|AK148570.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
           full-length enriched library, clone:7120409G09
           product:unclassifiable, full insert sequence
          Length = 2900

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  ccaagccatcatctggtcct 98
           ||||||||||||||||||||
Sbjct: 243 ccaagccatcatctggtcct 224

---

>gb|AY857461.1| Suberites domuncula S4 mRNA, complete cds
          Length = 786

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 42 cattggatgcttgacaagct 61
          ||||||||||||||||||||
Sbjct: 49 cattggatgcttgacaagct 68

---

>emb|AL353586.14| Human DNA sequence from clone RP11-347I22 on chromosome 10 Contains the
             3' end of a novel gene (DKFZP761F241) (FLJ38473 FLJ20925),
             complete sequence
          Length = 97608

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 141   aacagactgaaatatgctc 159
             |||||||||||||||||||
Sbjct: 93168 aacagactgaaatatgctc 93150

---

>gb|AC113190.8| Homo sapiens chromosome 15, clone RP11-186H10, complete sequence
          Length = 161765

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 105    gccagggaatgcctgcctc 123
              |||||||||||||||||||
Sbjct: 121437 gccagggaatgcctgcctc 121419

---

>gb|AC016587.9| Homo sapiens chromosome 19 clone CTD-2632B17, complete sequence
          Length = 155221

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 135   ctgaggaacagactgaaatatgc 157
             |||||||||||||| ||||||||
Sbjct: 96134 ctgaggaacagacttaaatatgc 96112

---

>emb|CR626797.1| full-length cDNA clone CS0DI054YI11 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 833

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 135 ctgaggaacagactgaaatatgc 157
           |||||||||||||| ||||||||
Sbjct: 137 ctgaggaacagacttaaatatgc 159

---

>emb|CR625616.1| full-length cDNA clone CS0DI069YN19 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 833

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 135 ctgaggaacagactgaaatatgc 157
           |||||||||||||| ||||||||
Sbjct: 137 ctgaggaacagacttaaatatgc 159

---

>emb|CR622909.1| full-length cDNA clone CS0DE004YN04 of Placenta of Homo sapiens
           (human)
          Length = 805

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 135 ctgaggaacagactgaaatatgc 157
           |||||||||||||| ||||||||
Sbjct: 144 ctgaggaacagacttaaatatgc 166

---

>emb|CR620106.1| full-length cDNA clone CS0DC024YK24 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 833

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 135 ctgaggaacagactgaaatatgc 157
           |||||||||||||| ||||||||
Sbjct: 137 ctgaggaacagacttaaatatgc 159

---

>emb|CR619631.1| full-length cDNA clone CS0DF020YI03 of Fetal brain of Homo sapiens
           (human)
          Length = 804

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 135 ctgaggaacagactgaaatatgc 157
           |||||||||||||| ||||||||
Sbjct: 137 ctgaggaacagacttaaatatgc 159

---

>emb|CR618319.1| full-length cDNA clone CS0DI014YL14 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 826

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 135 ctgaggaacagactgaaatatgc 157
           |||||||||||||| ||||||||
Sbjct: 130 ctgaggaacagacttaaatatgc 152

---

>emb|CR617295.1| full-length cDNA clone CS0DA002YL24 of Neuroblastoma of Homo
           sapiens (human)
          Length = 829

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 135 ctgaggaacagactgaaatatgc 157
           |||||||||||||| ||||||||
Sbjct: 137 ctgaggaacagacttaaatatgc 159

---

>emb|CR609771.1| full-length cDNA clone CS0DE006YJ15 of Placenta of Homo sapiens
           (human)
          Length = 831

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 135 ctgaggaacagactgaaatatgc 157
           |||||||||||||| ||||||||
Sbjct: 137 ctgaggaacagacttaaatatgc 159

---

>emb|CR606605.1| full-length cDNA clone CS0DJ012YL04 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 835

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 135 ctgaggaacagactgaaatatgc 157
           |||||||||||||| ||||||||
Sbjct: 137 ctgaggaacagacttaaatatgc 159

---

>emb|CR603462.1| full-length cDNA clone CS0DJ007YB09 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 831

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 135 ctgaggaacagactgaaatatgc 157
           |||||||||||||| ||||||||
Sbjct: 144 ctgaggaacagacttaaatatgc 166

---

>emb|CR602023.1| full-length cDNA clone CS0DL001YJ20 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 853

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 135 ctgaggaacagactgaaatatgc 157
           |||||||||||||| ||||||||
Sbjct: 173 ctgaggaacagacttaaatatgc 195

---

>emb|CR597212.1| full-length cDNA clone CS0DF028YL05 of Fetal brain of Homo sapiens
           (human)
          Length = 833

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 135 ctgaggaacagactgaaatatgc 157
           |||||||||||||| ||||||||
Sbjct: 137 ctgaggaacagacttaaatatgc 159

---

>emb|CR594080.1| full-length cDNA clone CS0DE007YF24 of Placenta of Homo sapiens
           (human)
          Length = 800

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 135 ctgaggaacagactgaaatatgc 157
           |||||||||||||| ||||||||
Sbjct: 137 ctgaggaacagacttaaatatgc 159

---

>gb|AC137755.5| Mus musculus chromosome 1, clone RP24-279G1, complete sequence
          Length = 153471

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 33/38 (86%)
 Strand = Plus / Minus

                                                   
Query: 91    ctggtcctnacaaggccagggaatgcctgcctctgatc 128
             |||||||| |||||   ||||||||| |||||||||||
Sbjct: 31001 ctggtcctcacaagctgagggaatgcttgcctctgatc 30964

---

>emb|AL928856.5| Mouse DNA sequence from clone RP23-413G24 on chromosome 2, complete
             sequence
          Length = 108193

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 110   ggaatgcctgcctctgatc 128
             |||||||||||||||||||
Sbjct: 64141 ggaatgcctgcctctgatc 64159

---

>emb|AL627393.13| Mouse DNA sequence from clone RP23-154M2 on chromosome 4, complete
            sequence
          Length = 78456

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 30/34 (88%)
 Strand = Plus / Minus

                                              
Query: 91   ctggtcctnacaaggccagggaatgcctgcctct 124
            |||||||| |||||   |||||||||||||||||
Sbjct: 2094 ctggtcctcacaagctgagggaatgcctgcctct 2061


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,237,996
Number of Sequences: 3902068
Number of extensions: 1237996
Number of successful extensions: 76983
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 76734
Number of HSP's gapped (non-prelim): 192
length of query: 164
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 142
effective length of database: 17,147,199,772
effective search space: 2434902367624
effective search space used: 2434902367624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)

---