ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2c19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PKDRE_HUMAN (Q9NTG1) Polycystic kidney disease and receptor for ... 32 0.83
2AXL1_YEAST (P40851) Putative protease AXL1 (EC 3.4.99.-) 30 3.2

>PKDRE_HUMAN (Q9NTG1) Polycystic kidney disease and receptor for egg jelly-related|
            protein precursor (PKD and REJ homolog)
          Length = 2253

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 70   PWHCIYYAWFTSFSSCNNSFWQNLFWHLSAG 162
            PW C+Y AWF  F++ + S +  +F+ L+ G
Sbjct: 1573 PWWCVYVAWFLVFATSSISSFFIVFYGLTYG 1603



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>AXL1_YEAST (P40851) Putative protease AXL1 (EC 3.4.99.-)|
          Length = 1208

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +1

Query: 163 VKIVMRLTDYFFSDHFIGRISNYLASTMFLTTAS*HLC-FSISCVALAL-LSLGKSGWHR 336
           +KI   L    F D   G +S YLAS  +LT        F+I  + L L L L  SGW  
Sbjct: 340 IKIYSHLWCELFGDESPGSLSYYLASKGWLTGCFAFTSEFAIGDIGLILELELTNSGWEN 399

Query: 337 LK 342
           +K
Sbjct: 400 IK 401


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,710,582
Number of Sequences: 219361
Number of extensions: 1054108
Number of successful extensions: 2086
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2085
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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