ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2c17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC147502.2| Mus musculus BAC clone RP23-111N9 from chromosome... 44 0.064
2gb|AC124438.4| Mus musculus BAC clone RP24-260K9 from chromosome... 44 0.064
3gb|AC127364.3| Mus musculus BAC clone RP23-3F6 from chromosome 1... 42 0.25
4gb|AC132463.3| Mus musculus BAC clone RP23-42M5 from chromosome ... 42 0.25
5emb|CT025667.9| Mouse DNA sequence from clone RP23-227F4 on chro... 42 0.25
6emb|AL135927.14| Human DNA sequence from clone RP11-54H19 on chr... 40 1.0
7emb|X04143.1|HSBGPG Human gene for bone gla protein (BGP) 40 1.0
8gb|AC153967.5| Mus musculus 10 BAC RP24-372A5 (Roswell Park Canc... 40 1.0
9gb|DQ007079.1| Homo sapiens bone gamma-carboxyglutamate (gla) pr... 40 1.0
10gb|AC007227.3|AC007227 Homo sapiens chromosome 1 clone RPCI-11_5... 40 1.0
11gb|AC133511.3| Mus musculus BAC clone RP23-413E2 from 10, comple... 40 1.0
12gb|AC111028.10| Mus musculus chromosome 8, clone RP23-221P20, co... 38 4.0
13gb|AC124333.13| Mus musculus chromosome 1, clone RP24-511E9, com... 38 4.0
14gb|AC164094.5| Mus musculus BAC clone RP23-133F10 from chromosom... 38 4.0
15gb|U15422.1|HSU15422 Homo sapiens protamine 1 (PRM1), protamine ... 38 4.0
16gb|AC123998.7| Mus musculus chromosome 5, clone RP24-421H18, com... 38 4.0
17gb|AC123741.9| Mus musculus chromosome 1, clone RP24-113A5, comp... 38 4.0
18ref|XM_959170.1| Neurospora crassa OR74A hypothetical protein (N... 38 4.0
19ref|XM_329955.1| Neurospora crassa OR74A hypothetical protein (N... 38 4.0
20gb|AC153378.4| Mus musculus 6 BAC RP23-106C18 (Roswell Park Canc... 38 4.0
21gb|AC124563.4| Mus musculus BAC clone RP23-206B15 from chromosom... 38 4.0
22gb|AC124536.4| Mus musculus BAC clone RP23-332H4 from chromosome... 38 4.0
23emb|CR848708.12| Wallaby DNA sequence from clone MEKBa-201B9, co... 38 4.0
24gb|AC163330.4| Mus musculus chromosome 5, clone RP23-167H23, com... 38 4.0
25gb|AC118283.5| Homo sapiens BAC clone RP11-1398P2 from 4, comple... 38 4.0
26gb|AC158790.5| Mus musculus chromosome 1, clone RP23-223M9, comp... 38 4.0
27gb|AC103620.12| Mus musculus chromosome 1, clone RP24-219C22, co... 38 4.0
28emb|AL589679.14| Mouse DNA sequence from clone RP23-189A16 on ch... 38 4.0
29gb|AC009121.8| Homo sapiens chromosome 16 clone RP11-485G7, comp... 38 4.0
30gb|AC105101.8| Homo sapiens chromosome 18, clone RP11-246E12, co... 38 4.0
31gb|AC137146.9| Mus musculus chromosome 1, clone RP24-358I14, com... 38 4.0
32gb|AC156286.8| Mus musculus 6 BAC RP24-285N17 (Roswell Park Canc... 38 4.0
33gb|AC156792.2| Mus musculus BAC clone RP24-160P13 from chromosom... 38 4.0
34gb|AC147067.4| Homo sapiens BAC clone RP13-1016M1 from 4, comple... 38 4.0
35gb|AC155653.4| Mus musculus 6 BAC RP24-503P15 (Roswell Park Canc... 38 4.0
36emb|CT030256.13| Mouse DNA sequence from clone RP23-346K5 on chr... 38 4.0
37emb|BX005041.11| Zebrafish DNA sequence from clone DKEY-38L12 in... 38 4.0
38gb|AC099722.7| Mus musculus chromosome 3, clone RP23-282E13, com... 38 4.0
39gb|AC135360.3| Mus musculus BAC clone RP24-396P4 from 10, comple... 38 4.0
40gb|AC142450.3| Mus musculus BAC clone RP24-425G6 from 8, complet... 38 4.0
41gb|AC135120.4| Mus musculus BAC clone RP24-536H22 from 8, comple... 38 4.0
42gb|AC140264.2| Mus musculus BAC clone RP23-316F10 from 10, compl... 38 4.0
43gb|AC166320.4| Sorex araneus, clone XX-26482057F19, complete seq... 38 4.0
44emb|AL627182.22| Mouse DNA sequence from clone RP23-32K12 on chr... 38 4.0
45emb|AL845352.7| Mouse DNA sequence from clone RP23-29A7 on chrom... 38 4.0
46emb|AL691444.9| Mouse DNA sequence from clone RP23-224E21 on chr... 38 4.0
47emb|AL772173.16| Mouse DNA sequence from clone RP23-163P22 on ch... 38 4.0
48emb|AL806523.14| Mouse DNA sequence from clone RP23-423O7 on chr... 38 4.0
49gb|AC164877.2| Mus musculus BAC clone RP24-340N21 from chromosom... 38 4.0
50emb|AL929226.7| Mouse DNA sequence from clone RP23-368N20 on chr... 38 4.0 
>gb|AC147502.2| Mus musculus BAC clone RP23-111N9 from chromosome 7, complete sequence
          Length = 202934

 Score = 44.1 bits (22), Expect = 0.064
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 5      ctcccatccctcctctccctac 26
              ||||||||||||||||||||||
Sbjct: 148571 ctcccatccctcctctccctac 148592
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>gb|AC124438.4| Mus musculus BAC clone RP24-260K9 from chromosome 7, complete sequence
          Length = 183326

 Score = 44.1 bits (22), Expect = 0.064
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 5     ctcccatccctcctctccctac 26
             ||||||||||||||||||||||
Sbjct: 24880 ctcccatccctcctctccctac 24901
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>gb|AC127364.3| Mus musculus BAC clone RP23-3F6 from chromosome 1, complete sequence
          Length = 204558

 Score = 42.1 bits (21), Expect = 0.25
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 6     tcccatccctcctctccctac 26
             |||||||||||||||||||||
Sbjct: 66364 tcccatccctcctctccctac 66344
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>gb|AC132463.3| Mus musculus BAC clone RP23-42M5 from chromosome 13, complete sequence
          Length = 151340

 Score = 42.1 bits (21), Expect = 0.25
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 7     cccatccctcctctccctacg 27
             |||||||||||||||||||||
Sbjct: 89790 cccatccctcctctccctacg 89770
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>emb|CT025667.9| Mouse DNA sequence from clone RP23-227F4 on chromosome 13, complete
              sequence
          Length = 206864

 Score = 42.1 bits (21), Expect = 0.25
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 7      cccatccctcctctccctacg 27
              |||||||||||||||||||||
Sbjct: 192679 cccatccctcctctccctacg 192699
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>emb|AL135927.14| Human DNA sequence from clone RP11-54H19 on chromosome 1 Contains the 3'
              end of the LMNA gene for lamin A/C, the gene for a novel
              protein similar to semaphorins (FLJ12287), a novel gene
              (KIAA0446), the PMF1 gene for polyamine-modulated factor 1,
              the BGLAP gene for bone gamma-carboxyglutamate (gla)
              protein (osteocalcin), the gene for progestin and adipoQ
              receptor family member VI (PAQR6) and the 3' end of the
              gene for Est1p-like protein B (EST1B), complete sequence
          Length = 164168

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      cccatccctcctctccctac 26
              ||||||||||||||||||||
Sbjct: 130678 cccatccctcctctccctac 130659
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>emb|X04143.1|HSBGPG Human gene for bone gla protein (BGP)
          Length = 1675

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 7    cccatccctcctctccctac 26
            ||||||||||||||||||||
Sbjct: 1254 cccatccctcctctccctac 1235
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>gb|AC153967.5| Mus musculus 10 BAC RP24-372A5 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 205657

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     ctcccatccctcctctccct 24
             ||||||||||||||||||||
Sbjct: 66813 ctcccatccctcctctccct 66794
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>gb|DQ007079.1| Homo sapiens bone gamma-carboxyglutamate (gla) protein (osteocalcin)
            (BGLAP) gene, complete cds
          Length = 10147

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 7    cccatccctcctctccctac 26
            ||||||||||||||||||||
Sbjct: 4879 cccatccctcctctccctac 4860
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>gb|AC007227.3|AC007227 Homo sapiens chromosome 1 clone RPCI-11_54H19, complete sequence
          Length = 164179

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     cccatccctcctctccctac 26
             ||||||||||||||||||||
Sbjct: 33491 cccatccctcctctccctac 33510
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>gb|AC133511.3| Mus musculus BAC clone RP23-413E2 from 10, complete sequence
          Length = 214377

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     ctcccatccctcctctccct 24
             ||||||||||||||||||||
Sbjct: 21771 ctcccatccctcctctccct 21752
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>gb|AC111028.10| Mus musculus chromosome 8, clone RP23-221P20, complete sequence
          Length = 193256

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     tcccatccctcctctccct 24
             |||||||||||||||||||
Sbjct: 64130 tcccatccctcctctccct 64148
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>gb|AC124333.13| Mus musculus chromosome 1, clone RP24-511E9, complete sequence
          Length = 185857

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 5     ctcccatccctcctctccc 23
             |||||||||||||||||||
Sbjct: 32986 ctcccatccctcctctccc 32968
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>gb|AC164094.5| Mus musculus BAC clone RP23-133F10 from chromosome 6, complete sequence
          Length = 216271

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 6      tcccatccctcctctccct 24
              |||||||||||||||||||
Sbjct: 190609 tcccatccctcctctccct 190591
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>gb|U15422.1|HSU15422 Homo sapiens protamine 1 (PRM1), protamine 2 (PRM2), and transition
            protein 2 (TNP2) genes, complete cds
          Length = 40573

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 6    tcccatccctcctctccct 24
            |||||||||||||||||||
Sbjct: 1277 tcccatccctcctctccct 1259
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>gb|AC123998.7| Mus musculus chromosome 5, clone RP24-421H18, complete sequence
          Length = 151344

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     tcccatccctcctctccct 24
             |||||||||||||||||||
Sbjct: 71727 tcccatccctcctctccct 71709
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>gb|AC123741.9| Mus musculus chromosome 1, clone RP24-113A5, complete sequence
          Length = 188453

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     tcccatccctcctctccct 24
             |||||||||||||||||||
Sbjct: 77905 tcccatccctcctctccct 77923
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>ref|XM_959170.1| Neurospora crassa OR74A hypothetical protein (NCU02768.1) partial
            mRNA
          Length = 5016

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 3    aactcccatccctcctctc 21
            |||||||||||||||||||
Sbjct: 4568 aactcccatccctcctctc 4586
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>ref|XM_329955.1| Neurospora crassa OR74A hypothetical protein (NCU02768.1) partial
            mRNA
          Length = 5016

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 3    aactcccatccctcctctc 21
            |||||||||||||||||||
Sbjct: 4568 aactcccatccctcctctc 4586
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>gb|AC153378.4| Mus musculus 6 BAC RP23-106C18 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 199980

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 6    tcccatccctcctctccct 24
            |||||||||||||||||||
Sbjct: 5678 tcccatccctcctctccct 5660
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>gb|AC124563.4| Mus musculus BAC clone RP23-206B15 from chromosome 6, complete sequence
          Length = 210092

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 6      tcccatccctcctctccct 24
              |||||||||||||||||||
Sbjct: 166641 tcccatccctcctctccct 166659
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>gb|AC124536.4| Mus musculus BAC clone RP23-332H4 from chromosome 3, complete sequence
          Length = 165047

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 6      tcccatccctcctctccct 24
              |||||||||||||||||||
Sbjct: 161962 tcccatccctcctctccct 161944
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>emb|CR848708.12| Wallaby DNA sequence from clone MEKBa-201B9, complete sequence
          Length = 194524

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     cccatccctcctctcccta 25
             |||||||||||||||||||
Sbjct: 14857 cccatccctcctctcccta 14839
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>gb|AC163330.4| Mus musculus chromosome 5, clone RP23-167H23, complete sequence
          Length = 207781

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     tcccatccctcctctccct 24
             |||||||||||||||||||
Sbjct: 33064 tcccatccctcctctccct 33082
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>gb|AC118283.5| Homo sapiens BAC clone RP11-1398P2 from 4, complete sequence
          Length = 130805

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 6      tcccatccctcctctccct 24
              |||||||||||||||||||
Sbjct: 110725 tcccatccctcctctccct 110743
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>gb|AC158790.5| Mus musculus chromosome 1, clone RP23-223M9, complete sequence
          Length = 178205

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     tcccatccctcctctccct 24
             |||||||||||||||||||
Sbjct: 16111 tcccatccctcctctccct 16093
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>gb|AC103620.12| Mus musculus chromosome 1, clone RP24-219C22, complete sequence
          Length = 171728

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     tcccatccctcctctccct 24
             |||||||||||||||||||
Sbjct: 78500 tcccatccctcctctccct 78482
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>emb|AL589679.14| Mouse DNA sequence from clone RP23-189A16 on chromosome 13 Contains the
              3' end of the Csh1 gene for chorionic somatomammotropin
              hormone 1,  two genes for novel proteins similar to
              chorionic somatomammotropin hormone 1 (Csh1), the Prlpi
              gene for prolactin-like protein I (Prlpj, decidualin), the
              Csh2 gene for chorionic somatomammotropin hormone 2, the
              gene for protein 1600016E11RIK similar to prolactin and a
              novel gene (4930511O05Rik), complete sequence
          Length = 207737

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 6      tcccatccctcctctccct 24
              |||||||||||||||||||
Sbjct: 125231 tcccatccctcctctccct 125213
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>gb|AC009121.8| Homo sapiens chromosome 16 clone RP11-485G7, complete sequence
          Length = 131487

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     tcccatccctcctctccct 24
             |||||||||||||||||||
Sbjct: 68995 tcccatccctcctctccct 68977
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>gb|AC105101.8| Homo sapiens chromosome 18, clone RP11-246E12, complete sequence
          Length = 172626

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 5      ctcccatccctcctctccc 23
              |||||||||||||||||||
Sbjct: 111326 ctcccatccctcctctccc 111308
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>gb|AC137146.9| Mus musculus chromosome 1, clone RP24-358I14, complete sequence
          Length = 189466

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     ctcccatccctcctctccc 23
             |||||||||||||||||||
Sbjct: 53037 ctcccatccctcctctccc 53055
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>gb|AC156286.8| Mus musculus 6 BAC RP24-285N17 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 180204

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     tcccatccctcctctccct 24
             |||||||||||||||||||
Sbjct: 64632 tcccatccctcctctccct 64650
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>gb|AC156792.2| Mus musculus BAC clone RP24-160P13 from chromosome 12, complete
             sequence
          Length = 187170

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     tcccatccctcctctccct 24
             |||||||||||||||||||
Sbjct: 75772 tcccatccctcctctccct 75754
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>gb|AC147067.4| Homo sapiens BAC clone RP13-1016M1 from 4, complete sequence
          Length = 167744

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 6      tcccatccctcctctccct 24
              |||||||||||||||||||
Sbjct: 112490 tcccatccctcctctccct 112508
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>gb|AC155653.4| Mus musculus 6 BAC RP24-503P15 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 136868

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     tcccatccctcctctccct 24
             |||||||||||||||||||
Sbjct: 25345 tcccatccctcctctccct 25363
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>emb|CT030256.13| Mouse DNA sequence from clone RP23-346K5 on chromosome 13, complete
              sequence
          Length = 197972

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 6      tcccatccctcctctccct 24
              |||||||||||||||||||
Sbjct: 128165 tcccatccctcctctccct 128183
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>emb|BX005041.11| Zebrafish DNA sequence from clone DKEY-38L12 in linkage group 18,
             complete sequence
          Length = 190853

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     ctcccatccctcctctccc 23
             |||||||||||||||||||
Sbjct: 55977 ctcccatccctcctctccc 55995
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>gb|AC099722.7| Mus musculus chromosome 3, clone RP23-282E13, complete sequence
          Length = 233425

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     tcccatccctcctctccct 24
             |||||||||||||||||||
Sbjct: 56909 tcccatccctcctctccct 56891
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>gb|AC135360.3| Mus musculus BAC clone RP24-396P4 from 10, complete sequence
          Length = 154276

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 6      tcccatccctcctctccct 24
              |||||||||||||||||||
Sbjct: 145897 tcccatccctcctctccct 145879
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>gb|AC142450.3| Mus musculus BAC clone RP24-425G6 from 8, complete sequence
          Length = 153108

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 6      tcccatccctcctctccct 24
              |||||||||||||||||||
Sbjct: 129387 tcccatccctcctctccct 129369
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>gb|AC135120.4| Mus musculus BAC clone RP24-536H22 from 8, complete sequence
          Length = 153982

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 6      tcccatccctcctctccct 24
              |||||||||||||||||||
Sbjct: 102311 tcccatccctcctctccct 102329
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>gb|AC140264.2| Mus musculus BAC clone RP23-316F10 from 10, complete sequence
          Length = 176292

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 6      tcccatccctcctctccct 24
              |||||||||||||||||||
Sbjct: 162620 tcccatccctcctctccct 162638
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>gb|AC166320.4| Sorex araneus, clone XX-26482057F19, complete sequence
          Length = 39234

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     ctcccatccctcctctccc 23
             |||||||||||||||||||
Sbjct: 15953 ctcccatccctcctctccc 15971
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>emb|AL627182.22| Mouse DNA sequence from clone RP23-32K12 on chromosome 4, complete
              sequence
          Length = 241562

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 6      tcccatccctcctctccct 24
              |||||||||||||||||||
Sbjct: 157894 tcccatccctcctctccct 157912
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>emb|AL845352.7| Mouse DNA sequence from clone RP23-29A7 on chromosome 2, complete
             sequence
          Length = 196996

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     tcccatccctcctctccct 24
             |||||||||||||||||||
Sbjct: 37008 tcccatccctcctctccct 36990
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>emb|AL691444.9| Mouse DNA sequence from clone RP23-224E21 on chromosome 2, complete
             sequence
          Length = 182726

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 1     ctaactcccatccctcctctccc 23
             ||||||||||||||| |||||||
Sbjct: 19631 ctaactcccatccctactctccc 19609
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>emb|AL772173.16| Mouse DNA sequence from clone RP23-163P22 on chromosome 2, complete
             sequence
          Length = 203185

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     tcccatccctcctctccct 24
             |||||||||||||||||||
Sbjct: 81096 tcccatccctcctctccct 81078
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>emb|AL806523.14| Mouse DNA sequence from clone RP23-423O7 on chromosome 4, complete
              sequence
          Length = 217762

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 6      tcccatccctcctctccct 24
              |||||||||||||||||||
Sbjct: 195815 tcccatccctcctctccct 195797
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>gb|AC164877.2| Mus musculus BAC clone RP24-340N21 from chromosome 13, complete sequence
          Length = 179184

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 6      tcccatccctcctctccct 24
              |||||||||||||||||||
Sbjct: 128157 tcccatccctcctctccct 128175
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>emb|AL929226.7| Mouse DNA sequence from clone RP23-368N20 on chromosome X, complete
             sequence
          Length = 79248

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     tcccatccctcctctccct 24
             |||||||||||||||||||
Sbjct: 52095 tcccatccctcctctccct 52077


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 632,775
Number of Sequences: 3902068
Number of extensions: 632775
Number of successful extensions: 48671
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48566
Number of HSP's gapped (non-prelim): 105
length of query: 92
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 71
effective length of database: 17,151,101,840
effective search space: 1217728230640
effective search space used: 1217728230640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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