ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2c16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1227 bits (619), Expect = 0.0 Identities = 626/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119509 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 119450 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119449 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 119390 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119389 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 119330 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119329 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119270 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119269 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119210 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119209 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 119150 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119149 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 119090 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119089 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 119030 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 119029 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 118971 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118970 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 118911 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 118910 tgaagatgaacggggctaagcgatctg 118884 Score = 1227 bits (619), Expect = 0.0 Identities = 626/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95385 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 95444 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95445 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 95504 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95505 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 95564 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95565 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 95624 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95625 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 95684 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95685 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 95744 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95745 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 95804 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95805 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 95864 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 95865 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 95923 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95924 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 95983 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 95984 tgaagatgaacggggctaagcgatctg 96010
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119374 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 119315 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119314 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 119255 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119254 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 119195 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119194 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119135 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119134 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119075 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119074 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 119015 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119014 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 118955 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118954 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118895 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 118894 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 118836 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118835 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 118776 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 118775 tgaagatgaacggggctaagcgatctg 118749 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95782 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 95841 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95842 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 95901 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95902 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 95961 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95962 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 96021 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96022 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96081 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96082 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96141 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96142 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 96201 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96202 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 96261 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 96262 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 96320 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96321 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 96380 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 96381 tgaagatgaacggggctaagcgatctg 96407
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119374 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 119315 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119314 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 119255 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119254 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 119195 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119194 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119135 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119134 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119075 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119074 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 119015 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119014 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 118955 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118954 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118895 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 118894 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 118836 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118835 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 118776 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 118775 tgaagatgaacggggctaagcgatctg 118749 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95782 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 95841 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95842 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 95901 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95902 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 95961 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95962 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 96021 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96022 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96081 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96082 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96141 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96142 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 96201 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96202 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 96261 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 96262 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 96320 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96321 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 96380 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 96381 tgaagatgaacggggctaagcgatctg 96407
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119323 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 119264 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119263 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 119204 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119203 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 119144 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119143 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119084 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119083 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119024 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119023 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 118964 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118963 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 118904 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118903 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118844 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 118843 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 118785 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118784 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 118725 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 118724 tgaagatgaacggggctaagcgatctg 118698 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95727 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 95786 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95787 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 95846 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95847 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 95906 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95907 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 95966 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95967 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96026 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96027 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96086 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96087 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 96146 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96147 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 96206 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 96207 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 96265 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96266 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 96325 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 96326 tgaagatgaacggggctaagcgatctg 96352
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508360 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 31508419 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 31508420 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 31508479 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508480 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 31508539 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508540 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 31508599 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508600 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 31508659 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508660 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 31508719 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508720 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 31508779 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508780 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 31508839 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 31508840 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 31508898 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508899 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 31508958 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 31508959 tgaagatgaacggggctaagcgatctg 31508985 Score = 385 bits (194), Expect = e-103 Identities = 201/202 (99%), Gaps = 1/202 (0%) Strand = Plus / Minus Query: 437 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 497 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 556 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtggggg-tgcaaagacagccaggaggtttgcctag 11513199 Query: 557 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513198 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 11513139 Query: 617 atgaacggggctaagcgatctg 638 |||||||||||||||||||||| Sbjct: 11513138 atgaacggggctaagcgatctg 11513117 Score = 196 bits (99), Expect = 6e-47 Identities = 99/99 (100%) Strand = Plus / Minus Query: 540 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 600 gcgcccttgcgctgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctg 27320565 Score = 133 bits (67), Expect = 8e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 453 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 512 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 513 taaaggaggtggggg 527 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 456 gtcgagagggaaacagcccggatcaccagctaaggccc 493 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 355 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 409 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84236 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 84177 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 84176 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 84117 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84116 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 84057 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84056 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 83997 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83996 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 83937 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83936 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 83877 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83876 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 83817 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83816 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 83757 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 83756 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 83698 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83697 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 83638 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 83637 tgaagatgaacggggctaagcgatctg 83611
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119343 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 119284 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119283 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 119224 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119223 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 119164 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119163 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119104 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119103 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119044 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119043 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 118984 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118983 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 118924 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118923 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118864 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 118863 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 118805 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118804 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 118745 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 118744 tgaagatgaacggggctaagcgatctg 118718 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95775 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 95834 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95835 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 95894 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95895 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 95954 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95955 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 96014 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96015 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96074 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96075 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96134 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96135 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 96194 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96195 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 96254 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 96255 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 96313 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96314 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 96373 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 96374 tgaagatgaacggggctaagcgatctg 96400
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14549 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 14608 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 14609 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 14668 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14669 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 14728 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14729 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 14788 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14789 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 14848 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14849 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 14908 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14909 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 14968 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14969 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 15028 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 15029 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 15087 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15088 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 15147 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 15148 tgaagatgaacggggctaagcgatctg 15174 Score = 1195 bits (603), Expect = 0.0 Identities = 623/627 (99%), Gaps = 2/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122824 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 122883 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 122884 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 122943 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 122944 gcttatggacccgaac-taggtgatctatccatgaccaggatgaagcttggatgaaacta 123002 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123003 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 123062 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123063 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 123122 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123123 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 123182 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123183 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 123242 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123243 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 123302 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 123303 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 123361 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123362 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 123421 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 123422 tgaagatgaacggggctaagcgatctg 123448
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141357 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 141416 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 141417 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 141476 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141477 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 141536 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141537 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 141596 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141597 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 141656 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141657 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 141716 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141717 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 141776 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141777 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 141836 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141837 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 141895 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141896 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 141955 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 141956 tgaagatgaacggggctaagcgatctg 141982
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93953 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 94012 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 94013 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 94072 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94073 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 94132 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94133 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 94192 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94193 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 94252 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94253 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 94312 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94313 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 94372 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94373 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 94432 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 94433 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 94491 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94492 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 94551 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 94552 tgaagatgaacggggctaagcgatctg 94578
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28017 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 28076 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 28077 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 28136 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28137 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 28196 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28197 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 28256 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28257 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 28316 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28317 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 28376 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28377 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 28436 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28437 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 28496 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 28497 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 28555 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28556 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 28615 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 28616 tgaagatgaacggggctaagcgatctg 28642
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268709 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 9268768 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9268769 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 9268828 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268829 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 9268888 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268889 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 9268948 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268949 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9269008 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269009 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9269068 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269069 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 9269128 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269129 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 9269188 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9269189 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 9269247 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269248 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 9269307 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 9269308 tgaagatgaacggggctaagcgatctg 9269334 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056623 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 9056682 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9056683 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 9056742 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056743 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 9056802 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056803 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 9056862 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056863 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9056922 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056923 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9056982 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056983 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 9057042 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057043 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 9057102 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9057103 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 9057161 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057162 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 9057221 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 9057222 tgaagatgaacggggctaagcgatctg 9057248 Score = 1211 bits (611), Expect = 0.0 Identities = 624/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228209 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 9228268 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9228269 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 9228328 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228329 gcttatggacccgaacctaggtgatctatccatgaccaggatgaagcttggatgaaacta 9228388 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228389 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 9228448 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228449 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9228508 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228509 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9228568 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228569 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 9228628 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228629 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 9228688 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9228689 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 9228747 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228748 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 9228807 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 9228808 tgaagatgaacggggctaagcgatctg 9228834 Score = 1195 bits (603), Expect = 0.0 Identities = 623/627 (99%), Gaps = 2/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164798 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 9164857 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9164858 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 9164917 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164918 gcttatggacccgaac-taggtgatctatccatgaccaggatgaagcttggatgaaacta 9164976 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164977 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 9165036 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165037 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9165096 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165097 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9165156 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165157 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 9165216 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165217 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 9165276 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9165277 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 9165335 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165336 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 9165395 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 9165396 tgaagatgaacggggctaagcgatctg 9165422
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938694 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 19938753 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 19938754 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 19938813 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938814 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 19938873 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938874 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 19938933 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938934 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 19938993 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938994 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 19939053 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939054 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 19939113 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939114 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 19939173 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 19939174 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 19939232 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939233 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 19939292 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 19939293 tgaagatgaacggggctaagcgatctg 19939319 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387561 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 10387620 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10387621 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 10387680 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387681 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 10387740 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387741 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 10387800 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387801 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 10387860 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387861 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 10387920 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387921 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 10387980 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387981 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 10388040 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10388041 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 10388099 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388100 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 10388159 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 10388160 tgaagatgaacggggctaagcgatctg 10388186 Score = 1211 bits (611), Expect = 0.0 Identities = 624/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276737 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 10276678 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10276677 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 10276618 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276617 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 10276558 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276557 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 10276498 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276497 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 10276438 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276437 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 10276378 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276377 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 10276318 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276317 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 10276258 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10276257 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 10276199 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276198 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 10276139 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||| ||||| Sbjct: 10276138 tgaagatgaacggggctaagcaatctg 10276112 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 594 gatcgagcgcccttgcgctgaagatgaacggggctaagc 632 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 54.0 bits (27), Expect = 6e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 362 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 421 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 422 tcggccagtgagacgatgggggataagcttcatcgtcgagag 463 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Minus Query: 535 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598876 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 31598935 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 31598936 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 31598995 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598996 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 31599055 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599056 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 31599115 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599116 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 31599175 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599176 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 31599235 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599236 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 31599295 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599296 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 31599355 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 31599356 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 31599414 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599415 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 31599474 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 31599475 tgaagatgaacggggctaagcgatctg 31599501 Score = 385 bits (194), Expect = e-103 Identities = 201/202 (99%), Gaps = 1/202 (0%) Strand = Plus / Minus Query: 437 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 497 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 556 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtggggg-tgcaaagacagccaggaggtttgcctag 11509962 Query: 557 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509961 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 11509902 Query: 617 atgaacggggctaagcgatctg 638 |||||||||||||||||||||| Sbjct: 11509901 atgaacggggctaagcgatctg 11509880 Score = 196 bits (99), Expect = 6e-47 Identities = 99/99 (100%) Strand = Plus / Minus Query: 540 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 600 gcgcccttgcgctgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctg 27411888 Score = 133 bits (67), Expect = 8e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 453 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 512 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 513 taaaggaggtggggg 527 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 456 gtcgagagggaaacagcccggatcaccagctaaggccc 493 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 355 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 409 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526192 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 33526251 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 33526252 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 33526311 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526312 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 33526371 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526372 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 33526431 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526432 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 33526491 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526492 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 33526551 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526552 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 33526611 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526612 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 33526671 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 33526672 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 33526730 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526731 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 33526790 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 33526791 tgaagatgaacggggctaagcgatctg 33526817 Score = 303 bits (153), Expect = 4e-79 Identities = 184/193 (95%), Gaps = 6/193 (3%) Strand = Plus / Plus Query: 446 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 505 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 506 tcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagcca 565 |||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 527811 tcagtgataaaggaggtggggg-tgcaaagac-----ggaggtttgcctaaaagcagcca 527864 Query: 566 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527865 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 527924 Query: 626 gctaagcgatctg 638 ||||||||||||| Sbjct: 527925 gctaagcgatctg 527937 Score = 172 bits (87), Expect = 9e-40 Identities = 87/87 (100%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678012 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 16677953 Query: 72 aagggaacggaacccaccggagccgta 98 ||||||||||||||||||||||||||| Sbjct: 16677952 aagggaacggaacccaccggagccgta 16677926 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccg 46 ||||||||||||||||||||||||||||||||||| Sbjct: 32744697 gatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 594 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 635 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47349 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 47290 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 47289 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 47230 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47229 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 47170 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47169 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 47110 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47109 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 47050 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47049 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 46990 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46989 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 46930 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46929 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 46870 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 46869 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 46811 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46810 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 46751 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 46750 tgaagatgaacggggctaagcgatctg 46724
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71389 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71448 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 71449 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 71508 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71509 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 71568 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71569 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 71628 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71629 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 71688 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71689 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 71748 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71749 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 71808 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71809 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 71868 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 71869 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 71927 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71928 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 71987 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 71988 tgaagatgaacggggctaagcgatctg 72014
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 220 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 221 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 280 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 340 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 400 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 460 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 520 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 580 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 640 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 641 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 699 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 759 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 760 tgaagatgaacggggctaagcgatctg 786
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 415 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 416 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 475 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 535 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 595 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 596 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 655 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 715 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 775 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 835 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 836 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 894 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 895 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 954 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 955 tgaagatgaacggggctaagcgatctg 981
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 286 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 287 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 346 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 347 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 406 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 407 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 466 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 467 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 526 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 586 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 587 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 646 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 706 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 707 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 765 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 825 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 826 tgaagatgaacggggctaagcgatctg 852
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 417 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 418 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 477 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 537 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 597 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 657 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 717 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 777 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 837 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 838 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 896 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 897 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 956 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 957 tgaagatgaacggggctaagcgatctg 983
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 236 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 237 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 296 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 356 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 416 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 476 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 536 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 596 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 656 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 657 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 715 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 775 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 776 tgaagatgaacggggctaagcgatctg 802
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 415 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 416 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 475 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 535 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 595 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 596 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 655 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 715 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 775 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 835 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 836 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 894 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 895 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 954 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 955 tgaagatgaacggggctaagcgatctg 981
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949970 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 19950029 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 19950030 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 19950089 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950090 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 19950149 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950150 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 19950209 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950210 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 19950269 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950270 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 19950329 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950330 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 19950389 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950390 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 19950449 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 19950450 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 19950508 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950509 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 19950568 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 19950569 tgaagatgaacggggctaagcgatctg 19950595 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393600 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 10393659 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10393660 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 10393719 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393720 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 10393779 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393780 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 10393839 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393840 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 10393899 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393900 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 10393959 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393960 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 10394019 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394020 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 10394079 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10394080 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 10394138 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394139 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 10394198 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 10394199 tgaagatgaacggggctaagcgatctg 10394225 Score = 1211 bits (611), Expect = 0.0 Identities = 624/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282776 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 10282717 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10282716 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 10282657 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282656 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 10282597 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282596 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 10282537 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282536 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 10282477 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282476 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 10282417 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282416 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 10282357 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282356 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 10282297 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10282296 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 10282238 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282237 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 10282178 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||| ||||| Sbjct: 10282177 tgaagatgaacggggctaagcaatctg 10282151 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 594 gatcgagcgcccttgcgctgaagatgaacggggctaagc 632 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 54.0 bits (27), Expect = 6e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 362 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 421 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 422 tcggccagtgagacgatgggggataagcttcatcgtcgagag 463 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Minus Query: 535 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119317 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 119258 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119257 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 119198 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119197 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 119138 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119137 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119078 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119077 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119018 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119017 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 118958 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118957 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 118898 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118897 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118838 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 118837 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 118779 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118778 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 118719 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 118718 tgaagatgaacggggctaagcgatctg 118692 Score = 1219 bits (615), Expect = 0.0 Identities = 625/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95722 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 95781 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95782 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 95841 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95842 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 95901 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95902 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 95961 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95962 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96021 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96022 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96081 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96082 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 96141 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96142 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 96201 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 96202 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 96260 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96261 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 96320 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 96321 tgaagatgaacggggctaagcgatctg 96347
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1211 bits (611), Expect = 0.0 Identities = 624/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118290 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 118231 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 118230 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 118171 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118170 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 118111 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118110 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 118051 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118050 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 117991 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117990 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 117931 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117930 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 117871 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117870 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 117811 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 117810 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 117752 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117751 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 117692 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||| ||||| Sbjct: 117691 tgaagatgaacggggctaagcaatctg 117665
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1211 bits (611), Expect = 0.0 Identities = 624/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20784 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 20843 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 20844 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 20903 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20904 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 20963 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20964 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 21023 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21024 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 21083 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21084 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 21143 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21144 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 21203 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21204 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 21263 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 21264 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 21322 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21323 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 21382 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 21383 tgaagatgaacggggctaagcgatctg 21409 Score = 1174 bits (592), Expect = 0.0 Identities = 621/628 (98%), Gaps = 2/628 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44334 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 44275 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| ||||||| |||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 44274 aagggaatggaaccctccggagccgtagtgaaagcgagtcttcatagggcgattgtcact 44215 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44214 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 44155 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg- 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44154 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgt 44095 Query: 251 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 310 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 44094 aaatgccactcgaacccagagctagttggttctccccgaaatgcgttgaggcgcagcagt 44035 Query: 311 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44034 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 43975 Query: 371 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43974 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 43915 Query: 431 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43914 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 43855 Query: 491 cccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggttt 550 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 43854 cccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggttt 43796 Query: 551 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 610 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43795 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 43736 Query: 611 ctgaagatgaacggggctaagcgatctg 638 |||||||||||||||||||||||||||| Sbjct: 43735 ctgaagatgaacggggctaagcgatctg 43708
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1211 bits (611), Expect = 0.0 Identities = 624/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58062 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 58003 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 58002 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 57943 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57942 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 57883 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57882 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 57823 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57822 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 57763 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57762 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 57703 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57702 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 57643 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57642 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 57583 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 57582 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 57524 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57523 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 57464 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||| ||||| Sbjct: 57463 tgaagatgaacggggctaagcaatctg 57437
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1211 bits (611), Expect = 0.0 Identities = 624/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 963 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 904 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 903 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 844 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 843 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 784 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 783 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 724 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 723 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 664 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 663 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 604 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 603 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 544 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 543 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 484 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 483 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 425 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 365 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 364 tgaagatgaacggggctaagcgatctg 338
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1211 bits (611), Expect = 0.0 Identities = 624/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123173 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 123114 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 123113 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 123054 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123053 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 122994 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122993 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 122934 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122933 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 122874 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122873 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 122814 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122813 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 122754 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122753 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 122694 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 122693 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 122635 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122634 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 122575 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 122574 tgaagatgaacggggctaagcgatctg 122548 Score = 1211 bits (611), Expect = 0.0 Identities = 624/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99664 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 99723 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 99724 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 99783 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99784 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 99843 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99844 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 99903 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99904 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 99963 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99964 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 100023 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100024 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 100083 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100084 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 100143 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 100144 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 100202 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100203 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 100262 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 100263 tgaagatgaacggggctaagcgatctg 100289
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1211 bits (611), Expect = 0.0 Identities = 624/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123890 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 123831 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 123830 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 123771 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123770 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 123711 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123710 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 123651 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123650 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 123591 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123590 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 123531 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123530 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 123471 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123470 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 123411 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 123410 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 123352 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123351 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 123292 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 123291 tgaagatgaacggggctaagcgatctg 123265 Score = 1211 bits (611), Expect = 0.0 Identities = 624/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100341 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 100400 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 100401 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 100460 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100461 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 100520 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100521 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 100580 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100581 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 100640 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100641 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 100700 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100701 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 100760 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100761 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 100820 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 100821 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 100879 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100880 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 100939 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 100940 tgaagatgaacggggctaagcgatctg 100966
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1203 bits (607), Expect = 0.0 Identities = 623/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9241572 gatctctgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggcttggtt 9241513 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9241512 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 9241453 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241452 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 9241393 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241392 agcagaggtccgaaccgtctgatgttgaagaatcagcggatgagttgtggttaggggtga 9241333 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241332 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9241273 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241272 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9241213 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241212 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 9241153 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241152 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 9241093 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9241092 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 9241034 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241033 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 9240974 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 9240973 tgaagatgaacggggctaagcgatctg 9240947 Score = 188 bits (95), Expect = 2e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 327 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 386 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 387 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 446 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 447 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 492 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%), Gaps = 5/102 (4%) Strand = Plus / Minus Query: 481 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggg-----tgcaaag 535 ||||||||| || ||||||||||||| ||| ||||| ||||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 536 acagccaggaggtttgcctagaagcagccaccctttaaagag 577 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 607 tgcgctgaagatgaacggggctaagcgatctg 638 |||| |||| ||||| |||||||||||||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctg 22199101 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 480 accagctaaggcccctaaatgaccgctcagtgataaagga 519 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1203 bits (607), Expect = 0.0 Identities = 623/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 52785 gatctctgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggcttggtt 52726 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 52725 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 52666 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52665 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 52606 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 52605 agcagaggtccgaaccgtctgatgttgaagaatcagcggatgagttgtggttaggggtga 52546 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52545 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 52486 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52485 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 52426 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52425 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 52366 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52365 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 52306 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 52305 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 52247 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52246 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 52187 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 52186 tgaagatgaacggggctaagcgatctg 52160
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1203 bits (607), Expect = 0.0 Identities = 623/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 355 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 414 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 415 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 474 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 475 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacca 534 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 594 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 595 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 654 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 655 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 714 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 774 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 834 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 835 ccctaaatgaccgctcagtgatagaggaggt-gggggtgcaaagacagccaggaggtttg 893 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 894 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 953 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 954 tgaagatgaacggggctaagcgatctg 980
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1174 bits (592), Expect = 0.0 Identities = 602/604 (99%), Gaps = 1/604 (0%) Strand = Plus / Plus Query: 35 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 95 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 154 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 155 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 215 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 241 Query: 275 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 301 Query: 335 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 361 Query: 395 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 421 Query: 455 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 514 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 481 Query: 515 aaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaa 574 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 aaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaa 540 Query: 575 gagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcga 634 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 gagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcga 600 Query: 635 tctg 638 |||| Sbjct: 601 tctg 604
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 1172 bits (591), Expect = 0.0 Identities = 601/603 (99%), Gaps = 1/603 (0%) Strand = Plus / Plus Query: 36 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 95 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 96 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 155 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 156 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 215 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 180 Query: 216 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 240 Query: 276 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 300 Query: 336 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 360 Query: 396 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 420 Query: 456 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 480 Query: 516 aggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaag 575 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 aggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaag 539 Query: 576 agtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgat 635 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 agtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgat 599 Query: 636 ctg 638 ||| Sbjct: 600 ctg 602
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1152 bits (581), Expect = 0.0 Identities = 591/593 (99%), Gaps = 1/593 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 417 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 418 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 477 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 537 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 597 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 657 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 717 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 777 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 837 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 838 ccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttg 896 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 897 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 949
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1148 bits (579), Expect = 0.0 Identities = 618/627 (98%), Gaps = 3/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123113 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 123054 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 123053 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 122994 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122993 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 122934 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122933 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 122874 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122873 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 122814 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 122813 gactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatc 122755 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122754 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 122695 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122694 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 122635 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 |||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 122634 cccttaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccatgaggtttg 122576 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 122575 cctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgc 122517 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 122516 tgaagatgaacggggctaagcgatctg 122490 Score = 1148 bits (579), Expect = 0.0 Identities = 618/627 (98%), Gaps = 3/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99624 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 99683 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 99684 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 99743 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99744 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 99803 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99804 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 99863 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99864 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 99923 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 99924 gactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatc 99982 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99983 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 100042 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100043 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 100102 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 |||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 100103 cccttaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccatgaggtttg 100161 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 100162 cctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgc 100220 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 100221 tgaagatgaacggggctaagcgatctg 100247
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1148 bits (579), Expect = 0.0 Identities = 618/627 (98%), Gaps = 3/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5977 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 6036 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 6037 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 6096 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6097 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 6156 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6157 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 6216 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6217 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 6276 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 6277 gactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatc 6335 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6336 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 6395 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6396 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 6455 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 |||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 6456 cccttaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccatgaggtttg 6514 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 6515 cctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgc 6573 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 6574 tgaagatgaacggggctaagcgatctg 6600
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1148 bits (579), Expect = 0.0 Identities = 618/627 (98%), Gaps = 3/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 624 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 625 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 684 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 685 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 744 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 804 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 805 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 864 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 865 gactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatc 923 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 924 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 983 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 984 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 1043 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 |||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 1044 cccttaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccatgaggtttg 1102 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 1103 cctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgc 1161 Query: 612 tgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||| Sbjct: 1162 tgaagatgaacggggctaagcgatctg 1188
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 1114 bits (562), Expect = 0.0 Identities = 611/625 (97%), Gaps = 3/625 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg--gcttgg 69 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 122655 gatctctgaccgcgtgcctgttgaagaatgagccggtgactcataggcagtgtggcttgg 122596 Query: 70 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 129 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 122595 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 122536 Query: 130 ctgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaac 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122535 ctgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaac 122476 Query: 190 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 249 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122475 taagcagaggttcgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 122416 Query: 250 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122415 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 122356 Query: 310 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122355 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 122296 Query: 370 tcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccag 429 | |||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| Sbjct: 122295 ttgaggcaaactctgaatactagatatgacccaaaaataataggattcaaagtcggccag 122236 Query: 430 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 489 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 122235 tgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcaccagctaag 122176 Query: 490 gcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtt 549 ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct: 122175 gcccctaaatgaccgctcaatgataaaggaggt-gggggtgcaaagacagccaggaggtt 122117 Query: 550 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 609 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 122116 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactaatcgagcgcccttgc 122057 Query: 610 gctgaagatgaacggggctaagcga 634 ||||||||||||||||||||||||| Sbjct: 122056 gctgaagatgaacggggctaagcga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 1114 bits (562), Expect = 0.0 Identities = 611/625 (97%), Gaps = 3/625 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg--gcttgg 69 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 12825196 gatctctgaccgcgtgcctgttgaagaatgagccggtgactcataggcagtgtggcttgg 12825137 Query: 70 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 129 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12825136 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 12825077 Query: 130 ctgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaac 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825076 ctgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaac 12825017 Query: 190 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 249 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825016 taagcagaggttcgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 12824957 Query: 250 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824956 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 12824897 Query: 310 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824896 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 12824837 Query: 370 tcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccag 429 | |||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| Sbjct: 12824836 ttgaggcaaactctgaatactagatatgacccaaaaataataggattcaaagtcggccag 12824777 Query: 430 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 489 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12824776 tgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcaccagctaag 12824717 Query: 490 gcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtt 549 ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct: 12824716 gcccctaaatgaccgctcaatgataaaggaggt-gggggtgcaaagacagccaggaggtt 12824658 Query: 550 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 609 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12824657 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactaatcgagcgcccttgc 12824598 Query: 610 gctgaagatgaacggggctaagcga 634 ||||||||||||||||||||||||| Sbjct: 12824597 gctgaagatgaacggggctaagcga 12824573
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 1076 bits (543), Expect = 0.0 Identities = 607/627 (96%), Gaps = 6/627 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141549 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 141490 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 141489 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcact 141435 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 141434 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 141375 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141374 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 141315 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141314 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 141255 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 141254 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 141195 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 141194 gaggcaaactctgaatactagatatgaccccaaaataacaggggtaaaggtcggccagtg 141135 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141134 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 141075 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 141074 ccctaaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttg 141016 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 141015 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc 140956 Query: 612 tgaagatgaacggggctaagcgatctg 638 |||||||||||||||||||||||||| Sbjct: 140955 cgaagatgaacggggctaagcgatctg 140929 Score = 1076 bits (543), Expect = 0.0 Identities = 607/627 (96%), Gaps = 6/627 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112108 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 112167 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 112168 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcact 112222 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 112223 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 112282 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112283 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 112342 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112343 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 112402 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 112403 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 112462 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 112463 gaggcaaactctgaatactagatatgaccccaaaataacaggggtaaaggtcggccagtg 112522 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112523 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 112582 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 112583 ccctaaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttg 112641 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 112642 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc 112701 Query: 612 tgaagatgaacggggctaagcgatctg 638 |||||||||||||||||||||||||| Sbjct: 112702 cgaagatgaacggggctaagcgatctg 112728
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 1070 bits (540), Expect = 0.0 Identities = 604/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131106 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131047 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 131046 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 130992 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130991 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 130932 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130931 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 130872 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130871 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 130812 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 130811 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 130752 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 130751 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 130692 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130691 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 130632 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 130631 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 130573 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 130572 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 130513 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 130512 agatgaacggggctaagcgatctg 130489 Score = 1070 bits (540), Expect = 0.0 Identities = 604/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103529 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 103588 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 103589 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 103643 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103644 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 103703 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103704 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 103763 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103764 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 103823 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 103824 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 103883 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103884 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 103943 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103944 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104003 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 104004 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 104062 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 104063 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 104122 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 104123 agatgaacggggctaagcgatctg 104146
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 1070 bits (540), Expect = 0.0 Identities = 604/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 621 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 622 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 676 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 677 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 736 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 796 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 856 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 857 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 916 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 917 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 976 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 977 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1036 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1037 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 1095 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1096 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 1155 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 1156 agatgaacggggctaagcgatctg 1179
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 1063 bits (536), Expect = 0.0 Identities = 603/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138943 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 138884 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 138883 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 138829 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138828 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 138769 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138768 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 138709 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138708 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 138649 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 138648 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 138589 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 138588 gcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgaga 138529 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138528 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 138469 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 138468 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 138410 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 138409 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 138350 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 138349 agatgaacggggctaagcgatctg 138326 Score = 1063 bits (536), Expect = 0.0 Identities = 603/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110154 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110213 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110214 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110268 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110269 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110328 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110329 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110388 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110389 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 110448 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110449 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110508 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 110509 gcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgaga 110568 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110569 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110628 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 110629 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 110687 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 110688 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 110747 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 110748 agatgaacggggctaagcgatctg 110771
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 1063 bits (536), Expect = 0.0 Identities = 603/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132214 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132155 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132154 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132100 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132099 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 132040 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132039 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131980 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131979 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131920 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131919 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 131860 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131859 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 131800 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131799 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131740 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 131739 taaatgatcgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 131681 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 131680 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 131621 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 131620 agatgaacggggctaagcgatctg 131597 Score = 1063 bits (536), Expect = 0.0 Identities = 603/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104664 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104723 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104724 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104778 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104779 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104838 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104839 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104898 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104899 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104958 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104959 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105018 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105019 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 105078 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105079 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105138 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 105139 taaatgatcgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 105197 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 105198 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 105257 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 105258 agatgaacggggctaagcgatctg 105281
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 1063 bits (536), Expect = 0.0 Identities = 603/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136377 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 136318 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 136317 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 136263 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 136203 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136202 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 136143 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136142 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 136083 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 136082 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 136023 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 136022 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135963 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135962 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135903 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 135902 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 135844 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 135843 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 135784 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 135783 agatgaacggggctaagcgatctg 135760 Score = 1063 bits (536), Expect = 0.0 Identities = 603/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107180 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 107239 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 107240 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107294 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107295 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107354 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107355 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107414 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107415 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107474 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107475 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107534 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107535 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107594 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107595 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107654 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 107655 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 107713 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 107714 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 107773 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 107774 agatgaacggggctaagcgatctg 107797
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 1063 bits (536), Expect = 0.0 Identities = 603/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142318 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 142259 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 142258 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 142204 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142203 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 142144 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142143 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 142084 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 142083 gccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgac 142024 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 142023 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 141964 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 141963 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 141904 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141903 cgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccc 141844 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 141843 taaatgatcgctcagtgataaaggaggt-aggggtgcaaagacagccaggaggtttgcct 141785 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 141784 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 141725 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 141724 agatgaacggggctaagcgatctg 141701 Score = 1063 bits (536), Expect = 0.0 Identities = 603/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111010 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 111069 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 111070 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 111124 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111125 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 111184 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111185 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 111244 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 111245 gccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgac 111304 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 111305 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 111364 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 111365 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 111424 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 111425 cgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccc 111484 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 111485 taaatgatcgctcagtgataaaggaggt-aggggtgcaaagacagccaggaggtttgcct 111543 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 111544 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 111603 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 111604 agatgaacggggctaagcgatctg 111627
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 1063 bits (536), Expect = 0.0 Identities = 603/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136031 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135972 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135971 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135917 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135916 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135857 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135856 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135797 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135796 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135737 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135736 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135677 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135676 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135617 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135616 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135557 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 135556 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 135498 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 135497 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 135438 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 135437 agatgaacggggctaagcgatctg 135414 Score = 1063 bits (536), Expect = 0.0 Identities = 603/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106394 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106453 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106454 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106508 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106509 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106568 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106569 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106628 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106629 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106688 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106689 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106748 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106749 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106808 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106809 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106868 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106869 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 106927 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106928 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106987 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 106988 agatgaacggggctaagcgatctg 107011
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 1063 bits (536), Expect = 0.0 Identities = 603/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132207 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132148 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132147 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132093 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132092 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 132033 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132032 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131973 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131972 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131913 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131912 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 131853 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131852 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 131793 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131792 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131733 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 131732 taaatgatcgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 131674 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 131673 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 131614 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 131613 agatgaacggggctaagcgatctg 131590 Score = 1063 bits (536), Expect = 0.0 Identities = 603/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104662 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104721 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104722 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104776 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104777 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104836 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104837 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104896 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104897 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104956 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104957 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105016 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105017 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 105076 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105077 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105136 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 105137 taaatgatcgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 105195 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 105196 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 105255 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 105256 agatgaacggggctaagcgatctg 105279
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 1061 bits (535), Expect = 0.0 Identities = 606/627 (96%), Gaps = 7/627 (1%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133664 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 133605 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 133604 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 133550 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 133549 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 133490 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133489 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 133430 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133429 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 133370 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 133369 gactagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 133310 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 133309 gaggcaaactctgaatactagatatgacccaaaaatcaca-gggtcaaggtcggccagtg 133251 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133250 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 133191 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 133190 ccctaaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttg 133132 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 ||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 133131 cctagaagccgccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc 133072 Query: 612 tgaagatgaacggggctaagcgatctg 638 |||||||||||||||||||||||||| Sbjct: 133071 cgaagatgaacggggctaagcgatctg 133045 Score = 1061 bits (535), Expect = 0.0 Identities = 606/627 (96%), Gaps = 7/627 (1%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104307 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 104366 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 104367 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 104421 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104422 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 104481 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104482 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 104541 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104542 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 104601 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 104602 gactagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 104661 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 104662 gaggcaaactctgaatactagatatgacccaaaaatcaca-gggtcaaggtcggccagtg 104720 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104721 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 104780 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 104781 ccctaaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttg 104839 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 ||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 104840 cctagaagccgccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc 104899 Query: 612 tgaagatgaacggggctaagcgatctg 638 |||||||||||||||||||||||||| Sbjct: 104900 cgaagatgaacggggctaagcgatctg 104926
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135739 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135680 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135679 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135625 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135624 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135565 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135564 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135505 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135504 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135445 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135444 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135385 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135384 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135325 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135324 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135265 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 135264 taaatgatcgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 135206 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 135205 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 135146 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 135145 agatgaacggggctaagcgatctg 135122 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106891 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106950 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106951 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107005 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107006 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107065 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107066 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107125 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107126 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107185 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107186 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107245 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107246 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107305 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107306 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107365 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 107366 taaatgatcgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 107424 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 107425 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 107484 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 107485 agatgaacggggctaagcgatctg 107508
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135340 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135281 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 135280 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 135226 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135225 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135166 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135165 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135106 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135105 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135046 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135045 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134986 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 134985 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 134926 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134925 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134866 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134865 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 134807 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134806 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134747 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 134746 agatgaacggggctaagcgatctg 134723 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106566 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106625 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 106626 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 106680 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106681 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106740 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106800 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106801 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106860 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106861 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106920 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 106921 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 106980 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106981 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107040 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 107041 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 107099 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 107100 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 107159 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 107160 agatgaacggggctaagcgatctg 107183
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2085 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 2144 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2145 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 2199 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2200 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 2259 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2260 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 2319 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2320 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 2379 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 2380 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 2439 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 2440 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 2499 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2500 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 2559 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 2560 taaatgatcgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 2618 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 2619 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 2678 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 2679 agatgaacggggctaagcgatctg 2702
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134985 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 134926 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134925 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134871 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134870 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134811 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134810 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134751 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134750 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134691 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134690 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134631 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134630 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134571 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134570 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134511 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134510 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 134452 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134451 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134392 Query: 615 agatgaacggggctaagcgatctg 638 ||||||||||||||||||| |||| Sbjct: 134391 agatgaacggggctaagcggtctg 134368 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106051 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106110 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106111 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106165 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106225 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106226 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106285 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106345 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106346 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106405 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106406 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106465 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106525 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106526 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 106584 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106585 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106644 Query: 615 agatgaacggggctaagcgatctg 638 ||||||||||||||||||| |||| Sbjct: 106645 agatgaacggggctaagcggtctg 106668
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135120 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135061 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135060 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135006 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135005 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134946 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134945 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134886 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134885 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134826 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134825 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134766 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134765 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134706 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134705 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134646 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134645 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 134587 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134586 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134527 Query: 615 agatgaacggggctaagcgatctg 638 ||||||||||||||||||| |||| Sbjct: 134526 agatgaacggggctaagcggtctg 134503 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106223 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106282 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106283 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106337 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106338 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106397 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106398 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106457 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106458 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106517 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106518 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106577 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106578 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106637 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106638 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106697 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106698 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 106756 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106757 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106816 Query: 615 agatgaacggggctaagcgatctg 638 ||||||||||||||||||| |||| Sbjct: 106817 agatgaacggggctaagcggtctg 106840
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135118 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135059 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135058 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135004 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135003 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134944 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134943 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134884 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134883 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134824 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134823 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134764 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134763 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134704 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134703 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134644 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134643 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 134585 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134584 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134525 Query: 615 agatgaacggggctaagcgatctg 638 ||||||||||||||||||| |||| Sbjct: 134524 agatgaacggggctaagcggtctg 134501 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106220 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106279 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106280 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106334 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106335 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106394 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106395 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106454 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106455 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106514 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106515 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106574 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106575 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106634 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106635 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106694 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106695 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 106753 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106754 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106813 Query: 615 agatgaacggggctaagcgatctg 638 ||||||||||||||||||| |||| Sbjct: 106814 agatgaacggggctaagcggtctg 106837
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135030 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 134971 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134970 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134916 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134915 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134856 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134855 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134796 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134736 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134735 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134676 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134675 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134616 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134615 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134556 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134555 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 134497 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134496 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134437 Query: 615 agatgaacggggctaagcgatctg 638 ||||||||||||||||||| |||| Sbjct: 134436 agatgaacggggctaagcggtctg 134413 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106098 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106157 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106158 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106212 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106213 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106272 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106273 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106332 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106333 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106392 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106393 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106452 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106453 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106512 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106513 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106572 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106573 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 106631 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106632 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106691 Query: 615 agatgaacggggctaagcgatctg 638 ||||||||||||||||||| |||| Sbjct: 106692 agatgaacggggctaagcggtctg 106715
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135619 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135560 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 135559 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 135505 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135504 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135445 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135444 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135385 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135384 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135325 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135324 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135265 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 135264 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 135205 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135204 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135145 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 135144 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 135086 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 135085 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 135026 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 135025 agatgaacggggctaagcgatctg 135002 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106788 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106847 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 106848 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 106902 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106903 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106962 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106963 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107022 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107023 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107082 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107083 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107142 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 107143 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 107202 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107203 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107262 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 107263 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 107321 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 107322 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 107381 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 107382 agatgaacggggctaagcgatctg 107405
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135737 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135678 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135677 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135623 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135622 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135563 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135562 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135503 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135502 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135443 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135442 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135383 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135382 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135323 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135322 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135263 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 135262 taaatgatcgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 135204 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 135203 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 135144 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 135143 agatgaacggggctaagcgatctg 135120 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106889 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106948 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106949 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107003 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107004 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107063 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107064 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107123 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107124 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107183 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107184 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107243 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107244 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107303 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107304 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107363 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 107364 taaatgatcgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 107422 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 107423 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 107482 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 107483 agatgaacggggctaagcgatctg 107506
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135468 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135409 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135408 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135354 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135353 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135294 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135293 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135234 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135233 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135174 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135173 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135114 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135113 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135054 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135053 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134994 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134993 taaatgatcgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 134935 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134934 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134875 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 134874 agatgaacggggctaagcgatctg 134851 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106670 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106729 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106730 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106784 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106785 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106844 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106845 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106904 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106905 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106964 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106965 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107024 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107025 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107084 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107085 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107144 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 107145 taaatgatcgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 107203 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 107204 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 107263 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 107264 agatgaacggggctaagcgatctg 107287
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139148 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139089 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139088 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 139034 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139033 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 138974 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138973 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 138914 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138913 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 138854 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 138853 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 138794 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 138793 gcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgaga 138734 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138733 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 138674 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 138673 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 138615 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 138614 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 138555 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 138554 agatgaacggggctaagcgatctg 138531 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110151 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110210 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110211 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110265 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110266 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110325 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110326 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110385 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110386 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 110445 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110446 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110505 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 110506 gcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgaga 110565 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110566 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110625 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 110626 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 110684 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 110685 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 110744 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 110745 agatgaacggggctaagcgatctg 110768
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 1055 bits (532), Expect = 0.0 Identities = 602/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 717 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 718 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 772 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 773 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 832 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 892 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 952 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 953 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 1012 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 1013 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 1072 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1073 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1132 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1133 taaatgatcgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 1191 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1192 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 1251 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 1252 agatgaacggggctaagcgatctg 1275
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 1051 bits (530), Expect = 0.0 Identities = 600/622 (96%), Gaps = 6/622 (0%) Strand = Plus / Minus Query: 17 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 76 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131228 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 131169 Query: 77 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 136 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 131168 aac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 131114 Query: 137 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 196 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 131113 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgg 131054 Query: 197 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131053 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 130994 Query: 257 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130993 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 130934 Query: 317 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 376 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 130933 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 130874 Query: 377 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 436 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 130873 aaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacg 130814 Query: 437 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130813 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 130754 Query: 497 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 556 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 130753 aatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcctag 130695 Query: 557 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 616 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 130694 aagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaag 130635 Query: 617 atgaacggggctaagcgatctg 638 ||||||||||||||||| |||| Sbjct: 130634 atgaacggggctaagcggtctg 130613 Score = 1051 bits (530), Expect = 0.0 Identities = 600/622 (96%), Gaps = 6/622 (0%) Strand = Plus / Plus Query: 17 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 76 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102217 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 102276 Query: 77 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 136 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 102277 aac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 102331 Query: 137 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 196 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 102332 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgg 102391 Query: 197 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102392 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 102451 Query: 257 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102452 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 102511 Query: 317 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 376 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 102512 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 102571 Query: 377 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 436 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 102572 aaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacg 102631 Query: 437 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102632 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 102691 Query: 497 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 556 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 102692 aatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcctag 102750 Query: 557 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 616 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 102751 aagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaag 102810 Query: 617 atgaacggggctaagcgatctg 638 ||||||||||||||||| |||| Sbjct: 102811 atgaacggggctaagcggtctg 102832
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 1047 bits (528), Expect = 0.0 Identities = 607/632 (96%), Gaps = 11/632 (1%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139027 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 138968 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||| ||||||||||| ||||||||||||||||| ||||||| ||||||||| Sbjct: 138967 aagggaac-----ccaccggagccatagcgaaagcgagtcttcatagggcaattgtcact 138913 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 138912 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 138853 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138852 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 138793 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138792 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 138733 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 138732 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 138673 Query: 372 gaggcaaactctgaatactagatatgaccc-----aaaaataacaggggtcaaggtcggc 426 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 138672 gaggcaaactctgaatactagatatgaccccaaaacaaaataacaggggtcaaggtcggc 138613 Query: 427 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138612 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 138553 Query: 487 aaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggag 546 |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 138552 aaggcccctaaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggag 138494 Query: 547 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 606 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 138493 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 138434 Query: 607 tgcgctgaagatgaacggggctaagcgatctg 638 ||||| |||||||||||||||||||||||||| Sbjct: 138433 tgcgccgaagatgaacggggctaagcgatctg 138402 Score = 1047 bits (528), Expect = 0.0 Identities = 607/632 (96%), Gaps = 11/632 (1%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110918 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 110977 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||| ||||||||||| ||||||||||||||||| ||||||| ||||||||| Sbjct: 110978 aagggaac-----ccaccggagccatagcgaaagcgagtcttcatagggcaattgtcact 111032 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 111033 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 111092 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111093 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 111152 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111153 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 111212 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 111213 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 111272 Query: 372 gaggcaaactctgaatactagatatgaccc-----aaaaataacaggggtcaaggtcggc 426 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 111273 gaggcaaactctgaatactagatatgaccccaaaacaaaataacaggggtcaaggtcggc 111332 Query: 427 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111333 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 111392 Query: 487 aaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggag 546 |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 111393 aaggcccctaaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggag 111451 Query: 547 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 606 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 111452 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 111511 Query: 607 tgcgctgaagatgaacggggctaagcgatctg 638 ||||| |||||||||||||||||||||||||| Sbjct: 111512 tgcgccgaagatgaacggggctaagcgatctg 111543
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 1043 bits (526), Expect = 0.0 Identities = 603/627 (96%), Gaps = 10/627 (1%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127305 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 127246 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| |||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 127245 aagggaat-----ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtcact 127191 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 127190 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 127131 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127130 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 127071 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127070 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 127011 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 127010 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 126951 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 126950 gaggcaaactctgaatactagatatgacccca----aacaggggtcaaggtcggccagtg 126895 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126894 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 126835 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 126834 ccctaaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttg 126776 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 126775 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc 126716 Query: 612 tgaagatgaacggggctaagcgatctg 638 |||||||||||||||||||||||||| Sbjct: 126715 cgaagatgaacggggctaagcgatctg 126689 Score = 1043 bits (526), Expect = 0.0 Identities = 603/627 (96%), Gaps = 10/627 (1%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107617 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 107676 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| |||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 107677 aagggaat-----ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtcact 107731 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 107732 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 107791 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107792 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 107851 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107852 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 107911 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 107912 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 107971 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 107972 gaggcaaactctgaatactagatatgacccca----aacaggggtcaaggtcggccagtg 108027 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108028 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 108087 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttg 551 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 108088 ccctaaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttg 108146 Query: 552 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 611 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 108147 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc 108206 Query: 612 tgaagatgaacggggctaagcgatctg 638 |||||||||||||||||||||||||| Sbjct: 108207 cgaagatgaacggggctaagcgatctg 108233
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 1039 bits (524), Expect = 0.0 Identities = 600/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 619 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 620 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 674 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 675 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 734 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 735 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 794 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 854 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 855 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 914 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 915 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 974 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1034 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1035 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 1093 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1094 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 1153 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 1154 agatgaacggggctaagcgatctg 1177
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 1039 bits (524), Expect = 0.0 Identities = 600/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132437 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132378 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132377 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132323 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 132322 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 132263 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 132262 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 132203 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132202 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 132143 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 132142 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 132083 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 132082 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 132023 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132022 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131963 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 131962 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 131904 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 131903 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 131844 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 131843 agatgaacggggctaagcgatctg 131820 Score = 1039 bits (524), Expect = 0.0 Identities = 600/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104327 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104386 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104387 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104441 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 104442 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 104501 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104502 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 104561 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104562 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104621 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104622 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 104681 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 104682 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 104741 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104742 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104801 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 104802 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 104860 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 104861 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 104920 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 104921 agatgaacggggctaagcgatctg 104944
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 1039 bits (524), Expect = 0.0 Identities = 600/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133398 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 133339 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 133338 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 133284 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 133283 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 133224 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 133223 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 133164 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133163 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 133104 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 133103 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 133044 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 133043 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 132984 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132983 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 132924 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 132923 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 132865 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 132864 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 132805 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 132804 agatgaacggggctaagcgatctg 132781 Score = 1039 bits (524), Expect = 0.0 Identities = 600/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105251 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105310 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 105311 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 105365 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 105366 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 105425 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105426 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 105485 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105486 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 105545 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 105546 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105605 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 105606 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 105665 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105666 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105725 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 105726 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 105784 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 105785 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 105844 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 105845 agatgaacggggctaagcgatctg 105868
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 1039 bits (524), Expect = 0.0 Identities = 600/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134997 ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag 134938 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134937 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134883 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134882 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134823 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134822 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134763 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134762 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134703 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134702 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134643 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134642 gcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134583 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134582 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134523 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134522 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 134464 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134463 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134404 Query: 615 agatgaacggggctaagcgatctg 638 ||||||||||||||||||| |||| Sbjct: 134403 agatgaacggggctaagcggtctg 134380 Score = 1039 bits (524), Expect = 0.0 Identities = 600/624 (96%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106065 ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag 106124 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106125 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106179 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106180 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106239 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106240 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106299 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106300 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106359 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106360 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106419 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106420 gcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106479 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106480 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106539 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106540 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 106598 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106599 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106658 Query: 615 agatgaacggggctaagcgatctg 638 ||||||||||||||||||| |||| Sbjct: 106659 agatgaacggggctaagcggtctg 106682
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 1033 bits (521), Expect = 0.0 Identities = 601/625 (96%), Gaps = 7/625 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 1115 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1116 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 1170 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1171 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 1230 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1231 gagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 1290 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1291 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 1350 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 1351 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 1410 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1411 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 1470 Query: 435 cgat-gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 493 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1471 cgatggggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1530 Query: 494 ctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcc 553 ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 1531 ctaaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcc 1589 Query: 554 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 613 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 1590 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 1649 Query: 614 aagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||| Sbjct: 1650 aagatgaacggggctaagcgatctg 1674
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 1031 bits (520), Expect = 0.0 Identities = 599/624 (95%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131306 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131247 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 131246 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgct 131192 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131191 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 131132 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131131 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131072 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131071 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131012 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131011 tagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 130952 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 130951 gcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgaga 130892 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130891 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 130832 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 130831 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacaaccaggaggtttgcct 130773 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 130772 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 130713 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 130712 agatgaacggggctaagcgatctg 130689 Score = 1031 bits (520), Expect = 0.0 Identities = 599/624 (95%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104088 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104147 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 104148 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgct 104202 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104203 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104262 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104263 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104322 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104323 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104382 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104383 tagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 104442 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 104443 gcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgaga 104502 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104503 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104562 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 104563 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacaaccaggaggtttgcct 104621 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 104622 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 104681 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 104682 agatgaacggggctaagcgatctg 104705
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 1023 bits (516), Expect = 0.0 Identities = 599/626 (95%), Gaps = 13/626 (2%) Strand = Plus / Minus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134425 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 134366 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 134365 agggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 134311 Query: 133 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134310 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 134251 Query: 193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 252 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134250 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134191 Query: 253 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134190 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 134131 Query: 313 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 372 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 134130 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 134071 Query: 373 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 432 |||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 134070 aggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtga 134018 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134017 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 133958 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 133957 cctaaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgc 133899 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 133898 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 133839 Query: 613 gaagatgaacggggctaagcgatctg 638 |||||||||||||||||||||||||| Sbjct: 133838 gaagatgaacggggctaagcgatctg 133813 Score = 1023 bits (516), Expect = 0.0 Identities = 599/626 (95%), Gaps = 13/626 (2%) Strand = Plus / Plus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105857 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 105916 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 105917 agggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 105971 Query: 133 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105972 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 106031 Query: 193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 252 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106032 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 106091 Query: 253 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106092 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 106151 Query: 313 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 372 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 106152 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 106211 Query: 373 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 432 |||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 106212 aggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtga 106264 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106265 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 106324 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 106325 cctaaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgc 106383 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 106384 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 106443 Query: 613 gaagatgaacggggctaagcgatctg 638 |||||||||||||||||||||||||| Sbjct: 106444 gaagatgaacggggctaagcgatctg 106469
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 1015 bits (512), Expect = 0.0 Identities = 597/624 (95%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 567 ctctgaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttggttaag 626 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 627 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 681 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 682 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 741 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 801 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 861 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 862 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 921 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 922 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 981 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 982 cgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccc 1041 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1042 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 1100 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 | |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1101 aaaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 1160 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||| ||||||| Sbjct: 1161 agatgaacggggctaaacgatctg 1184
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 1015 bits (512), Expect = 0.0 Identities = 597/624 (95%), Gaps = 6/624 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 129795 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129794 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 129735 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129734 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 129675 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 129674 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 129615 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 129614 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 129555 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 129554 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccc 129495 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 129494 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 129436 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 129435 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 129376 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 129375 agatgaacggggctaagcgatctg 129352 Score = 1015 bits (512), Expect = 0.0 Identities = 597/624 (95%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 102661 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102662 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 102721 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102722 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 102781 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 102782 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 102841 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 102842 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 102901 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 102902 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccc 102961 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 102962 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 103020 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 103021 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 103080 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 103081 agatgaacggggctaagcgatctg 103104
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 1011 bits (510), Expect = 0.0 Identities = 601/626 (96%), Gaps = 9/626 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2329 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 2388 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2389 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 2443 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2444 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 2503 Query: 195 agagg-tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 253 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2504 ggagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 2563 Query: 254 tg-ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2564 tggccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 2623 Query: 313 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 372 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 2624 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 2683 Query: 373 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 432 ||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||| Sbjct: 2684 aggcaaactctgaatactagatatgactc-aaaataacaggggtcaaggtcggctagtga 2742 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2743 gacgatgggggataagcttcatcgtcgagagggaaacagtccggatcaccagctaaggcc 2802 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 2803 cctaaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgc 2861 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 |||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| Sbjct: 2862 ctagaagcagccacccttgaaagagtgcgtaatagcscactgatcgagcgctcttgcgcc 2921 Query: 613 gaagatgaacggggctaagcgatctg 638 |||||||||||||||||||||||||| Sbjct: 2922 gaagatgaacggggctaagcgatctg 2947
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1007 bits (508), Expect = 0.0 Identities = 514/516 (99%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 527 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 528 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 587 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 588 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 647 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 648 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 707 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 708 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 767 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 827 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 828 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 887 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 888 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 947 Query: 492 ccctaaatgaccgctcagtgataaaggaggtggggg 527 ||||||||||||||||||||||||||||||| |||| Sbjct: 948 ccctaaatgaccgctcagtgataaaggaggtagggg 983
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 999 bits (504), Expect = 0.0 Identities = 595/624 (95%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 628 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 629 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 683 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 684 tatggacccgaacctgggtgatctatccatgaccaggatggagcttgggtgaaactaagt 743 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 744 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 803 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 804 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 863 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 864 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 923 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 924 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 983 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 984 caatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1043 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||| Sbjct: 1044 taaatgaccgctcaatgataaaggaggt-aggggtgcacagacagccacgaggtttgcct 1102 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 | |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 1103 ataagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccca 1162 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||| ||||||| Sbjct: 1163 agatgaacggggctaaacgatctg 1186
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 997 bits (503), Expect = 0.0 Identities = 596/624 (95%), Gaps = 6/624 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 935 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 936 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 995 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 996 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1055 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1056 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 1114 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1115 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 1174 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 1175 agatgaacggggctaagcgatctg 1198
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 995 bits (502), Expect = 0.0 Identities = 594/624 (95%), Gaps = 13/624 (2%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 220 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 280 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 281 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 340 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 341 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 400 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 401 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 453 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 513 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 514 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 572 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 573 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 632 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 633 agatgaacggggctaagcgatctg 656
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 995 bits (502), Expect = 0.0 Identities = 594/624 (95%), Gaps = 13/624 (2%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139799 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139740 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139739 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 139685 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139684 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 139625 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139624 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 139565 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 139564 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 139505 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 139504 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 139445 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 139444 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 139392 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139391 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 139332 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 139331 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 139273 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 139272 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 139213 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 139212 agatgaacggggctaagcgatctg 139189 Score = 995 bits (502), Expect = 0.0 Identities = 594/624 (95%), Gaps = 13/624 (2%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110261 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110320 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110321 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110375 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110376 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110435 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110436 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110495 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110496 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 110555 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110556 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110615 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 110616 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 110668 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110669 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110728 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 110729 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 110787 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 110788 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 110847 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 110848 agatgaacggggctaagcgatctg 110871
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 987 bits (498), Expect = 0.0 Identities = 593/624 (95%), Gaps = 13/624 (2%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 236 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 296 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 297 gccgctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 356 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 357 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 416 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 417 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 469 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 529 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 530 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcct 588 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 589 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 648 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 649 agatgaacggggctaagcgatctg 672
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 987 bits (498), Expect = 0.0 Identities = 568/590 (96%), Gaps = 6/590 (1%) Strand = Plus / Plus Query: 49 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 108 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 109 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 168 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 169 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 228 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 766 Query: 229 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 826 Query: 289 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 886 Query: 349 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaata 408 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 887 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaata 946 Query: 409 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 468 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 acaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 1006 Query: 469 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggg 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1007 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt-agggg 1065 Query: 529 tgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagc 588 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1066 tgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagc 1125 Query: 589 tcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 638 ||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 1126 tcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctg 1175
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 981 bits (495), Expect = 0.0 Identities = 594/623 (95%), Gaps = 8/623 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 177579 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 177580 ggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtgaaat 177638 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177639 gccactcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 177698 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| Sbjct: 177699 tggacatctaggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcgag 177758 Query: 375 gcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtgag 433 |||||||||||||||||||||||||| ||||||| | |||| |||||||||| |||||| Sbjct: 177759 gcaaactctgaatactagatatgacctcaaaataagaggggggcaaggtcggctagtgag 177818 Query: 434 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 493 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 177819 acgatgggggataagcttcatcgtcgagagggaaagagcccggatcaccagctaaggccc 177878 Query: 494 ctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcc 553 ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 177879 ctaaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcc 177937 Query: 554 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 613 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 177938 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 177997 Query: 614 aagatgaacggggctaagcgatc 636 ||||||||||||||||||||||| Sbjct: 177998 aagatgaacggggctaagcgatc 178020 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Plus Query: 535 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Plus Query: 535 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 488 aggcccctaaatgaccgctcag 509 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 456 gtcgagagggaaacagcccggatc 479 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 456 gtcgagagggaaacagcccggatc 479 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 975 bits (492), Expect = 0.0 Identities = 495/496 (99%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 353 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 412 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 413 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 472 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 473 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 532 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 533 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 592 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 652 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 653 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 712 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 772 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 832 Query: 492 ccctaaatgaccgctc 507 |||||||||||||||| Sbjct: 833 ccctaaatgaccgctc 848
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 965 bits (487), Expect = 0.0 Identities = 542/559 (96%), Gaps = 1/559 (0%) Strand = Plus / Plus Query: 80 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 139 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 140 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 199 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 200 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 781 Query: 260 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 841 Query: 320 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 379 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 842 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 901 Query: 380 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 439 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 902 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 961 Query: 440 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1021 Query: 500 gaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaag 559 |||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1022 gaccgcccagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcctagaag 1080 Query: 560 cagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatg 619 ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 1081 cagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatg 1140 Query: 620 aacggggctaagcgatctg 638 ||||||||||||||||||| Sbjct: 1141 aacggggctaagcgatctg 1159
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 963 bits (486), Expect = 0.0 Identities = 589/622 (94%), Gaps = 6/622 (0%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 52125 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 52066 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 52065 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 52011 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 52010 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 51951 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51950 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 51891 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51890 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 51831 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 51830 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 51771 Query: 375 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 433 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 51770 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 51711 Query: 434 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51710 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 51651 Query: 494 ctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcc 553 |||| ||| |||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 51650 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgcc 51591 Query: 554 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 613 ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| | Sbjct: 51590 tagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccg 51531 Query: 614 aagatgaacggggctaagcgat 635 || ||||||||||||||||||| Sbjct: 51530 aatatgaacggggctaagcgat 51509 Score = 963 bits (486), Expect = 0.0 Identities = 589/622 (94%), Gaps = 6/622 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 37703 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 37762 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 37763 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 37817 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 37818 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 37877 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37878 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 37937 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37938 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 37997 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 37998 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 38057 Query: 375 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 433 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 38058 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 38117 Query: 434 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38118 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 38177 Query: 494 ctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcc 553 |||| ||| |||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 38178 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgcc 38237 Query: 554 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 613 ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| | Sbjct: 38238 tagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccg 38297 Query: 614 aagatgaacggggctaagcgat 635 || ||||||||||||||||||| Sbjct: 38298 aatatgaacggggctaagcgat 38319
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 963 bits (486), Expect = 0.0 Identities = 589/622 (94%), Gaps = 6/622 (0%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4631 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 4690 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 4691 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 4745 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4746 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 4805 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4806 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 4865 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4866 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 4925 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 4926 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 4985 Query: 375 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 433 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 4986 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 5045 Query: 434 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5046 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 5105 Query: 494 ctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcc 553 |||| ||| |||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 5106 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgcc 5165 Query: 554 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 613 ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| | Sbjct: 5166 tagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccg 5225 Query: 614 aagatgaacggggctaagcgat 635 || ||||||||||||||||||| Sbjct: 5226 aatatgaacggggctaagcgat 5247
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 961 bits (485), Expect = 0.0 Identities = 593/625 (94%), Gaps = 8/625 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 75 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 133 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 134 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 193 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 194 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 814 Query: 254 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 874 Query: 314 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 373 ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 875 ctggacatctaagggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 934 Query: 374 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 433 |||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 935 ggcaaactctgaatactaaatatgacctcaaaataacaggggttaaggtcggccagtgag 994 Query: 434 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 493 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 995 acgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggccc 1054 Query: 494 ctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcc 553 ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||| Sbjct: 1055 ctaaatgaccgctcagtgataaaggaggt-aggggtgcacagacagccaagaggtttgcc 1113 Query: 554 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 613 || |||||||||||||| ||||||||||||||| |||||||||||||||| ||||||| | Sbjct: 1114 taaaagcagccacccttgaaagagtgcgtaataactcactgatcgagcgctcttgcgccg 1173 Query: 614 aagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||| Sbjct: 1174 aagatgaacggggctaagcgatctg 1198
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 952 bits (480), Expect = 0.0 Identities = 590/624 (94%), Gaps = 7/624 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 754 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 814 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 874 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 875 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 934 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 935 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 994 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 995 ccatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccc 1054 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| Sbjct: 1055 taaatgaccgctcagtgataaaggaggt-aggggtgcagagacagccaagaggtttgcct 1113 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| | Sbjct: 1114 agaagcagccacccttgaaagagtgcgtaatagctcactgatccagcgctcttgcgccca 1173 Query: 615 agatgaacggggctaagcgatctg 638 | |||||||||||||||||||||| Sbjct: 1174 aaatgaacggggctaagcgatctg 1197
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 620 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 621 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 680 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 740 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 800 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 860 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 861 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 920 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 921 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 980 Query: 432 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 981 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 1040 Query: 492 cc 493 || Sbjct: 1041 cc 1042
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 942 bits (475), Expect = 0.0 Identities = 588/623 (94%), Gaps = 7/623 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 619 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||| |||||||||||||| || ||||| | |||||||||||| Sbjct: 620 ggaac-----ccaccggagccatagcgaaagcgagtattcataggactattgtcactgct 674 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 675 tatggacccgaacctgggtgatctatccatgaccaggatgaagctttggtgaaactaagt 734 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 794 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 854 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 855 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 914 Query: 375 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 433 |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 915 gcaaactctgaatactagaatatgacctaaaaataacaggggtaaaggtcggccagtgag 974 Query: 434 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 493 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 975 acgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggccc 1034 Query: 494 ctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcc 553 |||| ||| |||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 1035 ctaattgatcgctcagtgataaaggaggt-aggggtgcagagacagccaggaggtttgcc 1093 Query: 554 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 613 ||||||||||||||||| ||| |||||||||||||| ||||||||||||| ||||||| | Sbjct: 1094 tagaagcagccacccttgaaatagtgcgtaatagcttactgatcgagcgctcttgcgccg 1153 Query: 614 aagatgaacggggctaagcgatc 636 ||||| ||||||||||||||||| Sbjct: 1154 aagattaacggggctaagcgatc 1176
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 938 bits (473), Expect = 0.0 Identities = 587/624 (94%), Gaps = 12/624 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgag 935 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| | |||||||| ||||||||||| ||||| Sbjct: 936 gcaaactctgaatactagatatgacc------tcacaggggttaaggtcggccaatgaga 989 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 990 cgatgggggataagcttcatcttccagagggaaacagcccggatcaccagctaaggcccc 1049 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 1050 taaatgaccgctcagtgataaaggaggt-aggggtgcaaagacagccacgaggtttgcct 1108 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 1109 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccca 1168 Query: 615 agatgaacggggctaagcgatctg 638 | |||||||||||||| ||||||| Sbjct: 1169 aaatgaacggggctaaacgatctg 1192
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 920 bits (464), Expect = 0.0 Identities = 590/628 (93%), Gaps = 8/628 (1%) Strand = Plus / Plus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 561 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 620 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 621 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 675 Query: 133 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 676 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 735 Query: 193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 252 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 795 Query: 253 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 855 Query: 313 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 856 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 915 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagt 430 ||||||||||||||||||||||||||| || |||||||||||| | |||||| ||||| Sbjct: 916 gaggcaaactctgaatactagatatgatccccaaataacaggggataaaggtcaaccagt 975 Query: 431 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 490 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 976 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 1035 Query: 491 cccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggttt 550 ||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1036 cccctaaatgaccgctcagtggtaaaggaggt-aggagtgcaaagacagccaggaggttt 1094 Query: 551 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 610 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 1095 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 1154 Query: 611 ctgaagatgaacggggctaagcgatctg 638 | ||||||||||||| ||||||| |||| Sbjct: 1155 ccgaagatgaacgggactaagcggtctg 1182
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 892 bits (450), Expect = 0.0 Identities = 587/628 (93%), Gaps = 11/628 (1%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 86823 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtt 86882 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||| |||||||||||||||||| |||||||||| || |||| ||||||||| Sbjct: 86883 aagggaac-----ccaccggagccgtagcgagagcgagtcttcatggggcaattgtcact 86937 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 86938 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 86997 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 86998 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 87057 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87058 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 87117 Query: 312 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 370 ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 87118 gactggaccatctaggggtaaagcactgtttcggtacgggccgcgagagcggtaccaaat 87177 Query: 371 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 430 |||||||||||||||||||||||| || ||| ||||| |||||| | |||| ||||| Sbjct: 87178 cgaggcaaactctgaatactagat-tgcccc---aataaaaggggtaagggtcaaccagt 87233 Query: 431 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 490 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 87234 gagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaagg 87293 Query: 491 cccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggttt 550 ||||||||||||||||||||||| ||||| || | ||||||||||||||||||||||| Sbjct: 87294 cccctaaatgaccgctcagtgatgaaggaagt-acgagtgcaaagacagccaggaggttt 87352 Query: 551 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 610 ||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 87353 gcctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 87412 Query: 611 ctgaagatgaacggggctaagcgatctg 638 | ||||||||||||| |||||||||||| Sbjct: 87413 ccgaagatgaacgggactaagcgatctg 87440
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 888 bits (448), Expect = 0.0 Identities = 586/628 (93%), Gaps = 8/628 (1%) Strand = Plus / Minus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 117588 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 117529 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 117528 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 117474 Query: 133 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 192 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 117473 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaa 117414 Query: 193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 252 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 117413 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 117354 Query: 253 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117353 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 117294 Query: 313 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 117293 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 117234 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagt 430 ||||||||||||||||||||||||||| || |||||| | ||||| | |||| ||||| Sbjct: 117233 gaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtcaaccagt 117174 Query: 431 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 490 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 117173 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 117114 Query: 491 cccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggttt 550 |||||||||||||||| |||| |||||||||| || ||||||||||||||||||||||| Sbjct: 117113 cccctaaatgaccgctaagtggtaaaggaggt-aggagtgcaaagacagccaggaggttt 117055 Query: 551 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 610 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 117054 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 116995 Query: 611 ctgaagatgaacggggctaagcgatctg 638 | ||||||||||||| ||||||| |||| Sbjct: 116994 ccgaagatgaacgggactaagcggtctg 116967 Score = 888 bits (448), Expect = 0.0 Identities = 586/628 (93%), Gaps = 8/628 (1%) Strand = Plus / Plus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 90514 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 90573 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 90574 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 90628 Query: 133 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 192 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 90629 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaa 90688 Query: 193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 252 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 90689 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 90748 Query: 253 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90749 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 90808 Query: 313 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 90809 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 90868 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagt 430 ||||||||||||||||||||||||||| || |||||| | ||||| | |||| ||||| Sbjct: 90869 gaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtcaaccagt 90928 Query: 431 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 490 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 90929 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 90988 Query: 491 cccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggttt 550 |||||||||||||||| |||| |||||||||| || ||||||||||||||||||||||| Sbjct: 90989 cccctaaatgaccgctaagtggtaaaggaggt-aggagtgcaaagacagccaggaggttt 91047 Query: 551 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 610 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 91048 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 91107 Query: 611 ctgaagatgaacggggctaagcgatctg 638 | ||||||||||||| ||||||| |||| Sbjct: 91108 ccgaagatgaacgggactaagcggtctg 91135
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 876 bits (442), Expect = 0.0 Identities = 586/630 (93%), Gaps = 8/630 (1%) Strand = Plus / Plus Query: 11 ggatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 70 |||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||| Sbjct: 559 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggt 618 Query: 71 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 130 |||||| || ||||||||||||||||||||||||||||| | |||| |||||||| Sbjct: 619 taaggggac-----ccaccggagccgtagcgaaagcgagtcttcctggggcaattgtcac 673 Query: 131 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 190 | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 674 tacttatggacccgaacctgggtgatctatccatgaccaggatgaagctcgggtgaaact 733 Query: 191 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 250 ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 734 aagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtg 793 Query: 251 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 853 Query: 311 tgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 854 tgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 913 Query: 370 tcgaggcaaactctgaatactagatatgacccaaaaataacagggg-tcaaggtcggcca 428 ||||||||||||||||||||||||||||| | |||||| |||| | | |||| ||| Sbjct: 914 tcgaggcaaactctgaatactagatatgatctccgaataacgggggataagggtcaacca 973 Query: 429 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 488 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 974 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaa 1033 Query: 489 ggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggt 548 ||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| Sbjct: 1034 ggcccctaaatgaccgctcagtggtaaaggaggt-aggagtgcaaagacagccaggaggt 1092 Query: 549 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 608 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1093 ttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttg 1152 Query: 609 cgctgaagatgaacggggctaagcgatctg 638 ||| ||||||||||||| ||||||| |||| Sbjct: 1153 cgccgaagatgaacgggactaagcggtctg 1182
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 872 bits (440), Expect = 0.0 Identities = 556/588 (94%), Gaps = 10/588 (1%) Strand = Plus / Plus Query: 55 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 113 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 114 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 171 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 172 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 231 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 788 Query: 232 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc-gaa 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 789 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaa 848 Query: 291 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 908 Query: 351 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 410 | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 909 ccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataac 968 Query: 411 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 470 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 aagggtcaaggtcggcaagtgagacgatgggggataagcttcatcgtcgagagggaaaca 1028 Query: 471 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtg 530 |||| ||||||| |||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 1029 gccctgatcacccgctaaggcccctaaatgatcgctcagtgataaaggaggt-aggggtg 1087 Query: 531 caaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctc 590 || |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| Sbjct: 1088 cagagacagccaggaggtttg-ctataagcagccacccttgaaagagtgcgtaatagctc 1146 Query: 591 actgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 638 ||||||||||||| ||||||| ||||||||||||||||||| |||||| Sbjct: 1147 actgatcgagcgctcttgcgccgaagatgaacggggctaagtgatctg 1194
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 860 bits (434), Expect = 0.0 Identities = 589/635 (92%), Gaps = 13/635 (2%) Strand = Plus / Minus Query: 11 ggatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 70 ||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 146000 ggatccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggt 145941 Query: 71 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 130 ||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 145940 taagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcac 145886 Query: 131 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 190 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 145885 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaact 145826 Query: 191 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 250 ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 145825 aagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtg 145766 Query: 251 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 310 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145765 aaatgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 145706 Query: 311 tgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 145705 tgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 145646 Query: 370 tcgaggcaaactctgaatactagatatga--cccaa---aaataacagg-ggtcaaggtc 423 ||||||||||||||||||||||| ||||| |||| ||| |||||| ||| |||||| Sbjct: 145645 tcgaggcaaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtc 145586 Query: 424 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 483 |||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 145585 agccagtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcacca 145526 Query: 484 gctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 543 |||||||||||||||||||||||||||| | |||||||| || ||||| |||||||||| Sbjct: 145525 gctaaggcccctaaatgaccgctcagtggtgaaggaggt-aggagtgcagagacagccag 145467 Query: 544 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 603 || |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 145466 gaagtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgc 145407 Query: 604 ccttgcgctgaagatgaacggggctaagcgatctg 638 ||||||| ||| ||||||||| ||||||| |||| Sbjct: 145406 tcttgcgccgaaaatgaacgggactaagcggtctg 145372 Score = 860 bits (434), Expect = 0.0 Identities = 589/635 (92%), Gaps = 13/635 (2%) Strand = Plus / Plus Query: 11 ggatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 70 ||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 112462 ggatccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggt 112521 Query: 71 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 130 ||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 112522 taagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcac 112576 Query: 131 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 190 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 112577 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaact 112636 Query: 191 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 250 ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112637 aagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtg 112696 Query: 251 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 310 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112697 aaatgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 112756 Query: 311 tgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 112757 tgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 112816 Query: 370 tcgaggcaaactctgaatactagatatga--cccaa---aaataacagg-ggtcaaggtc 423 ||||||||||||||||||||||| ||||| |||| ||| |||||| ||| |||||| Sbjct: 112817 tcgaggcaaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtc 112876 Query: 424 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 483 |||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 112877 agccagtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcacca 112936 Query: 484 gctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 543 |||||||||||||||||||||||||||| | |||||||| || ||||| |||||||||| Sbjct: 112937 gctaaggcccctaaatgaccgctcagtggtgaaggaggt-aggagtgcagagacagccag 112995 Query: 544 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 603 || |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 112996 gaagtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgc 113055 Query: 604 ccttgcgctgaagatgaacggggctaagcgatctg 638 ||||||| ||| ||||||||| ||||||| |||| Sbjct: 113056 tcttgcgccgaaaatgaacgggactaagcggtctg 113090
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 858 bits (433), Expect = 0.0 Identities = 583/628 (92%), Gaps = 10/628 (1%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 88909 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtt 88968 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||| |||||||||||||||||| |||||||||| || |||| ||||||||| Sbjct: 88969 aagggaac-----ccaccggagccgtagcgagagcgagtcttcatggggcaattgtcact 89023 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 89024 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 89083 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 89084 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 89143 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89144 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 89203 Query: 312 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 370 ||||||| ||||||||||||||||||||||||||| ||||| || |||||||||||||| Sbjct: 89204 gactggaccatctaggggtaaagcactgtttcggtacgggccacgagagcggtaccaaat 89263 Query: 371 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 430 |||||||||||||||||||||||| | ||||| | || ||||| | |||| ||||| Sbjct: 89264 cgaggcaaactctgaatactagat-taccccaata--aaagggggtaagggtcaaccagt 89320 Query: 431 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 490 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 89321 gagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaagg 89380 Query: 491 cccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggttt 550 ||||||||||||||||||||||| ||||| || | ||||||||||||||||||||||| Sbjct: 89381 cccctaaatgaccgctcagtgatgaaggaagt-acgagtgcaaagacagccaggaggttt 89439 Query: 551 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 610 ||||||||||||||| |||| |||||||||||||||||||||||||||||||| | |||| Sbjct: 89440 gcctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcgtgcg 89499 Query: 611 ctgaagatgaacggggctaagcgatctg 638 | ||||||||||||| |||||||||||| Sbjct: 89500 ccgaagatgaacgggactaagcgatctg 89527
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 829 bits (418), Expect = 0.0 Identities = 573/622 (92%), Gaps = 7/622 (1%) Strand = Plus / Minus Query: 11 ggatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 70 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 127882 ggatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggt 127823 Query: 71 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 130 ||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 127822 taagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcac 127768 Query: 131 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 190 |||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 127767 tgctcatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaact 127708 Query: 191 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 250 ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 127707 aagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtg 127648 Query: 251 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127647 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 127588 Query: 311 tgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 |||| |||| | |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 127587 tgaccggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaa 127528 Query: 370 tcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccag 429 ||||||||||||||||||||||| |||||||| || ||| ||| | |||| |||| Sbjct: 127527 tcgaggcaaactctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccag 127468 Query: 430 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 489 ||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| Sbjct: 127467 tgagacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaag 127408 Query: 490 gcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtt 549 ||||||||||||| |||||||| |||||||||| || |||||||||||||||||||||| Sbjct: 127407 gcccctaaatgactgctcagtggtaaaggaggt-aggagtgcaaagacagccaggaggtt 127349 Query: 550 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 609 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| | Sbjct: 127348 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgctcttac 127289 Query: 610 gctgaagatgaacggggctaag 631 || ||| ||||||||| ||||| Sbjct: 127288 gccgaaaatgaacgggactaag 127267 Score = 829 bits (418), Expect = 0.0 Identities = 573/622 (92%), Gaps = 7/622 (1%) Strand = Plus / Plus Query: 11 ggatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 70 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 95565 ggatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggt 95624 Query: 71 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 130 ||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 95625 taagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcac 95679 Query: 131 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 190 |||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 95680 tgctcatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaact 95739 Query: 191 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 250 ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95740 aagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtg 95799 Query: 251 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95800 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 95859 Query: 311 tgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 |||| |||| | |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95860 tgaccggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaa 95919 Query: 370 tcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccag 429 ||||||||||||||||||||||| |||||||| || ||| ||| | |||| |||| Sbjct: 95920 tcgaggcaaactctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccag 95979 Query: 430 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 489 ||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| Sbjct: 95980 tgagacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaag 96039 Query: 490 gcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtt 549 ||||||||||||| |||||||| |||||||||| || |||||||||||||||||||||| Sbjct: 96040 gcccctaaatgactgctcagtggtaaaggaggt-aggagtgcaaagacagccaggaggtt 96098 Query: 550 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 609 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| | Sbjct: 96099 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgctcttac 96158 Query: 610 gctgaagatgaacggggctaag 631 || ||| ||||||||| ||||| Sbjct: 96159 gccgaaaatgaacgggactaag 96180
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 821 bits (414), Expect = 0.0 Identities = 579/630 (91%), Gaps = 8/630 (1%) Strand = Plus / Plus Query: 11 ggatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 70 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 563 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggt 622 Query: 71 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 130 ||||||||| |||||||||||||||||||||| |||||| | |||| |||||||| Sbjct: 623 taagggaac-----ccaccggagccgtagcgaaagcaagtcttcctggggcaattgtcac 677 Query: 131 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 190 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 678 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaact 737 Query: 191 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 250 ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 738 aagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtg 797 Query: 251 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 798 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 857 Query: 311 tgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 858 tgactagactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 917 Query: 370 tcgaggcaaactctgaatactagatatgacccaaaaataacag-gggtcaaggtcggcca 428 ||||||||||||||||||||| |||| ||| | ||||| || | || | |||| ||| Sbjct: 918 tcgaggcaaactctgaatactggataggactccctaataatagagagtaagggtcaacca 977 Query: 429 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 488 ||||||| ||||||||||||||||| |||||||||| |||||||| ||||||| ||||| Sbjct: 978 gtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatcaccggctaa 1037 Query: 489 ggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggt 548 |||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||| Sbjct: 1038 ggcccctaaatgaccgctaagtggtaaaggaggt-aggagtgcaaagacagccaggaggt 1096 Query: 549 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 608 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1097 ttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctcttg 1156 Query: 609 cgctgaagatgaacggggctaagcgatctg 638 ||| ||||||||| ||| ||||||| |||| Sbjct: 1157 cgccgaagatgaatgggactaagcggtctg 1186
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 817 bits (412), Expect = 0.0 Identities = 418/420 (99%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 361 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 360 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 301 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 241 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 181 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 121 Query: 312 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 61 Query: 372 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 1
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 747 bits (377), Expect = 0.0 Identities = 422/437 (96%), Gaps = 5/437 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 46992 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46993 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 47052 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47053 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 47112 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 47113 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 47172 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 47173 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 47232 Query: 435 cgatgggggataagctt 451 ||||||||||||||||| Sbjct: 47233 cgatgggggataagctt 47249
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 743 bits (375), Expect = 0.0 Identities = 433/451 (96%), Gaps = 6/451 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364743 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 364802 Query: 75 ggaacggaacccaccggagccgtagcgaaag-cgagtcttaatagggcgattgtcactgc 133 ||||| ||||||||||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 364803 ggaac-----ccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgc 364857 Query: 134 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 193 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 364858 ttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 364917 Query: 194 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 253 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 364918 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 364977 Query: 254 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364978 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 365037 Query: 314 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 373 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 365038 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 365097 Query: 374 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 433 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 365098 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 365157 Query: 434 acgatgggggataagcttcatcgtcgagagg 464 ||| ||||||||||||||||||||||||||| Sbjct: 365158 acggtgggggataagcttcatcgtcgagagg 365188 Score = 184 bits (93), Expect = 2e-43 Identities = 128/137 (93%), Gaps = 2/137 (1%) Strand = Plus / Minus Query: 459 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 518 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 519 aggtggggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagag 577 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggt-aggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagag 129229 Query: 578 tgcgtaatagctcactg 594 |||||||||||||||| Sbjct: 129228 cgcgtaatagctcactg 129212 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Minus Query: 535 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 456 gtcgagagggaaacagcccggatc 479 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 702 bits (354), Expect = 0.0 Identities = 559/622 (89%), Gaps = 9/622 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 ||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaagt 740 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 800 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||| || |||||| |||||| ||||||||||||||||||||| |||||||| |||| || Sbjct: 801 gccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt-ac 859 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||| |||| ||| |||| ||||||||| ||| Sbjct: 860 cagacatctaggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattgag 919 Query: 375 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 432 ||||||| ||||||||||||||||| ||||||||||||||| | ||||| | ||||||| Sbjct: 920 gcaaactatgaatactagatatgacctccaaaaataacagggataaaggtggaccagtga 979 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 ||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 980 gaccatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcc 1039 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 |||||||||||||| ||| ||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 1040 cctaaatgaccgctaagttataaaggaggt-aggggtgcatagacaaccaggaggtttgc 1098 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 ||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 1099 ctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgctcttgcgcc 1158 Query: 613 gaagatgaacggggctaagcga 634 ||| ||||| ||| ||||||| Sbjct: 1159 gaatatgaatgggaataagcga 1180
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 690 bits (348), Expect = 0.0 Identities = 563/631 (89%), Gaps = 9/631 (1%) Strand = Plus / Minus Query: 11 ggatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 70 |||||||||||||||||||||||||||||||||||||||||| |||||| | ||| |||| Sbjct: 138709 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggt 138650 Query: 71 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 130 ||||||||| ||||||||||||||||||||||||||||| ||||| | |||| | Sbjct: 138649 taagggaac-----ccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgc 138595 Query: 131 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 190 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 138594 tgcttatggacccgaacccgggtgatctatccatgaccaggatgaagcttggatagaacc 138535 Query: 191 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 250 | | ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 138534 aggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtg 138475 Query: 251 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 310 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct: 138474 aaatgccactcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggt 138415 Query: 311 tgact-ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 ||||| || | || | |||||||||||||| |||||||||||||| |||| |||||||| Sbjct: 138414 tgactaggctacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaa 138355 Query: 370 tcgaggcaaactctgaatactagatatgacccaaaaataaca--ggggtcaaggtcggcc 427 |||||||||||||||||||| | |||| ||| | | | ||| |||| |||||||||| Sbjct: 138354 ccgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaaggtcggcc 138295 Query: 428 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 487 ||||||||| |||||||||||||||| ||||||||||| |||||||| |||||||||||| Sbjct: 138294 agtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagcta 138235 Query: 488 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 547 |||||||| ||||||||||||||| | |||||||| || |||||||||||||| ||||| Sbjct: 138234 aggcccctgaatgaccgctcagtggtgaaggaggt-aggagtgcaaagacagccgggagg 138176 Query: 548 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 607 |||||| |||||||||||||||| |||||||||||| ||||||||||||| ||||| | | Sbjct: 138175 tttgcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaagcgctcct 138116 Query: 608 gcgctgaagatgaacggggctaagcgatctg 638 |||| || |||||||||| ||||||| |||| Sbjct: 138115 gcgccgaggatgaacgggactaagcggtctg 138085 Score = 690 bits (348), Expect = 0.0 Identities = 563/631 (89%), Gaps = 9/631 (1%) Strand = Plus / Plus Query: 11 ggatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 70 |||||||||||||||||||||||||||||||||||||||||| |||||| | ||| |||| Sbjct: 83168 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggt 83227 Query: 71 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 130 ||||||||| ||||||||||||||||||||||||||||| ||||| | |||| | Sbjct: 83228 taagggaac-----ccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgc 83282 Query: 131 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 190 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 83283 tgcttatggacccgaacccgggtgatctatccatgaccaggatgaagcttggatagaacc 83342 Query: 191 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 250 | | ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 83343 aggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtg 83402 Query: 251 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 310 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct: 83403 aaatgccactcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggt 83462 Query: 311 tgact-ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 ||||| || | || | |||||||||||||| |||||||||||||| |||| |||||||| Sbjct: 83463 tgactaggctacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaa 83522 Query: 370 tcgaggcaaactctgaatactagatatgacccaaaaataaca--ggggtcaaggtcggcc 427 |||||||||||||||||||| | |||| ||| | | | ||| |||| |||||||||| Sbjct: 83523 ccgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaaggtcggcc 83582 Query: 428 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 487 ||||||||| |||||||||||||||| ||||||||||| |||||||| |||||||||||| Sbjct: 83583 agtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagcta 83642 Query: 488 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 547 |||||||| ||||||||||||||| | |||||||| || |||||||||||||| ||||| Sbjct: 83643 aggcccctgaatgaccgctcagtggtgaaggaggt-aggagtgcaaagacagccgggagg 83701 Query: 548 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 607 |||||| |||||||||||||||| |||||||||||| ||||||||||||| ||||| | | Sbjct: 83702 tttgcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaagcgctcct 83761 Query: 608 gcgctgaagatgaacggggctaagcgatctg 638 |||| || |||||||||| ||||||| |||| Sbjct: 83762 gcgccgaggatgaacgggactaagcggtctg 83792
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 622 bits (314), Expect = e-175 Identities = 365/382 (95%), Gaps = 5/382 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4791 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 4850 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 4851 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 4905 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 4906 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagt 4965 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 4966 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5025 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5026 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5085 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5086 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5145 Query: 375 gcaaactctgaatactagatat 396 |||||||||||||||||||||| Sbjct: 5146 gcaaactctgaatactagatat 5167 Score = 353 bits (178), Expect = 5e-94 Identities = 209/218 (95%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 421 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 481 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagc 540 ||||||||||||||||||||| |||||||||||||||||||| || | |||| ||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggag-tgcagagacagc 5300 Query: 541 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 600 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5301 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 5360 Query: 601 cgcccttgcgctgaagatgaacggggctaagcgatctg 638 ||| ||||||| |||||||||||||||||||||||||| Sbjct: 5361 cgctcttgcgccgaagatgaacggggctaagcgatctg 5398
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 622 bits (314), Expect = e-175 Identities = 365/382 (95%), Gaps = 5/382 (1%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23134 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 23075 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 23074 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 23020 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 23019 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagt 22960 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 22959 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 22900 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22899 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 22840 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 22839 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 22780 Query: 375 gcaaactctgaatactagatat 396 |||||||||||||||||||||| Sbjct: 22779 gcaaactctgaatactagatat 22758 Score = 353 bits (178), Expect = 5e-94 Identities = 209/218 (95%), Gaps = 1/218 (0%) Strand = Plus / Minus Query: 421 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 481 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagc 540 ||||||||||||||||||||| |||||||||||||||||||| || | |||| ||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggag-tgcagagacagc 22625 Query: 541 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 600 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 22624 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 22565 Query: 601 cgcccttgcgctgaagatgaacggggctaagcgatctg 638 ||| ||||||| |||||||||||||||||||||||||| Sbjct: 22564 cgctcttgcgccgaagatgaacggggctaagcgatctg 22527
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%), Gaps = 5/387 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5119 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 5173 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5174 tatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagt 5233 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5234 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5293 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5294 gccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5353 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5354 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5413 Query: 375 gcaaactctgaatactagatatgaccc 401 ||||||||||||||||||||||||||| Sbjct: 5414 gcaaactctgaatactagatatgaccc 5440 Score = 349 bits (176), Expect = 7e-93 Identities = 214/224 (95%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 413 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 471 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 472 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgc 531 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || | ||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggag-tgc 5563 Query: 532 aaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctca 591 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5564 agagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctca 5623 Query: 592 ctgatcgagcgcccttgcgctgaagatgaacggggctaagcgat 635 |||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 5624 ctgatcgagcgctcttgcgccgaagatgaacggggctaagcgat 5667
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%), Gaps = 5/387 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5119 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 5173 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5174 tatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagt 5233 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5234 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5293 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5294 gccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5353 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5354 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5413 Query: 375 gcaaactctgaatactagatatgaccc 401 ||||||||||||||||||||||||||| Sbjct: 5414 gcaaactctgaatactagatatgaccc 5440 Score = 349 bits (176), Expect = 7e-93 Identities = 214/224 (95%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 413 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 471 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 472 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgc 531 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || | ||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggag-tgc 5563 Query: 532 aaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctca 591 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5564 agagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctca 5623 Query: 592 ctgatcgagcgcccttgcgctgaagatgaacggggctaagcgat 635 |||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 5624 ctgatcgagcgctcttgcgccgaagatgaacggggctaagcgat 5667
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 613 bits (309), Expect = e-172 Identities = 364/381 (95%), Gaps = 6/381 (1%) Strand = Plus / Minus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 115650 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 115591 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 ||||| | ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 115590 agggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactg 115536 Query: 133 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 115535 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 115476 Query: 193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 252 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115475 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 115416 Query: 253 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115415 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 115356 Query: 313 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 115355 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 115296 Query: 372 gaggcaaactctgaatactag 392 ||||||||||||||||||||| Sbjct: 115295 gaggcaaactctgaatactag 115275 Score = 613 bits (309), Expect = e-172 Identities = 364/381 (95%), Gaps = 6/381 (1%) Strand = Plus / Plus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 86470 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 86529 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 ||||| | ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 86530 agggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactg 86584 Query: 133 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 86585 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 86644 Query: 193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 252 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86645 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 86704 Query: 253 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86705 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 86764 Query: 313 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 86765 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 86824 Query: 372 gaggcaaactctgaatactag 392 ||||||||||||||||||||| Sbjct: 86825 gaggcaaactctgaatactag 86845 Score = 291 bits (147), Expect = 1e-75 Identities = 202/219 (92%), Gaps = 1/219 (0%) Strand = Plus / Minus Query: 420 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 479 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 480 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 539 |||||||||||||||||||||||||||||||| |||||||||| || | ||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggag-tgcaaagacag 115128 Query: 540 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 599 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 115127 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaa 115068 Query: 600 gcgcccttgcgctgaagatgaacggggctaagcgatctg 638 |||| ||||||| ||||||||| ||| ||||||| |||| Sbjct: 115067 gcgctcttgcgccgaagatgaatgggactaagcggtctg 115029 Score = 291 bits (147), Expect = 1e-75 Identities = 202/219 (92%), Gaps = 1/219 (0%) Strand = Plus / Plus Query: 420 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 479 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 480 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 539 |||||||||||||||||||||||||||||||| |||||||||| || | ||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggag-tgcaaagacag 86992 Query: 540 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 599 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 86993 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaa 87052 Query: 600 gcgcccttgcgctgaagatgaacggggctaagcgatctg 638 |||| ||||||| ||||||||| ||| ||||||| |||| Sbjct: 87053 gcgctcttgcgccgaagatgaatgggactaagcggtctg 87091
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 611 bits (308), Expect = e-171 Identities = 369/388 (95%), Gaps = 6/388 (1%) Strand = Plus / Plus Query: 11 ggatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 70 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 4448 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggt 4507 Query: 71 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 130 |||||||| |||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 4508 taagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcac 4562 Query: 131 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 190 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4563 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaact 4622 Query: 191 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 250 ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 4623 aagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtg 4682 Query: 251 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4683 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 4742 Query: 311 tgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4743 tgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 4802 Query: 370 tcgaggcaaactctgaatactagatatg 397 ||||||||||||||||||||||| |||| Sbjct: 4803 tcgaggcaaactctgaatactaggtatg 4830 Score = 299 bits (151), Expect = 6e-78 Identities = 203/219 (92%), Gaps = 1/219 (0%) Strand = Plus / Plus Query: 420 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 479 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 480 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 539 |||||||||||||||||||||||||||||||| |||||||||| | | ||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagag-tgcaaagacag 4976 Query: 540 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 599 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 4977 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaa 5036 Query: 600 gcgcccttgcgctgaagatgaacggggctaagcgatctg 638 |||| ||||||| ||||||||| ||| ||||||| |||| Sbjct: 5037 gcgctcttgcgccgaagatgaatgggactaagcggtctg 5075
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 611 bits (308), Expect = e-171 Identities = 369/388 (95%), Gaps = 6/388 (1%) Strand = Plus / Plus Query: 11 ggatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 70 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 558 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggt 617 Query: 71 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 130 |||||||| |||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 618 taagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcac 672 Query: 131 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 190 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 673 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaact 732 Query: 191 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 250 ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 733 aagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtg 792 Query: 251 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 793 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 852 Query: 311 tgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 853 tgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 912 Query: 370 tcgaggcaaactctgaatactagatatg 397 ||||||||||||||||||||||| |||| Sbjct: 913 tcgaggcaaactctgaatactaggtatg 940 Score = 299 bits (151), Expect = 6e-78 Identities = 203/219 (92%), Gaps = 1/219 (0%) Strand = Plus / Plus Query: 420 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 479 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 480 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 539 |||||||||||||||||||||||||||||||| |||||||||| | | ||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagag-tgcaaagacag 1086 Query: 540 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 599 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 1087 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaa 1146 Query: 600 gcgcccttgcgctgaagatgaacggggctaagcgatctg 638 |||| ||||||| ||||||||| ||| ||||||| |||| Sbjct: 1147 gcgctcttgcgccgaagatgaatgggactaagcggtctg 1185
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 611 bits (308), Expect = e-171 Identities = 369/388 (95%), Gaps = 6/388 (1%) Strand = Plus / Minus Query: 11 ggatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 70 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 150687 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggt 150628 Query: 71 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 130 |||||||| |||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 150627 taagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcac 150573 Query: 131 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 190 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 150572 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaact 150513 Query: 191 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 250 ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 150512 aagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtg 150453 Query: 251 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150452 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 150393 Query: 311 tgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 150392 tgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 150333 Query: 370 tcgaggcaaactctgaatactagatatg 397 ||||||||||||||||||||||| |||| Sbjct: 150332 tcgaggcaaactctgaatactaggtatg 150305 Score = 611 bits (308), Expect = e-171 Identities = 369/388 (95%), Gaps = 6/388 (1%) Strand = Plus / Plus Query: 11 ggatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 70 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 117979 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggt 118038 Query: 71 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 130 |||||||| |||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 118039 taagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcac 118093 Query: 131 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 190 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 118094 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaact 118153 Query: 191 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 250 ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 118154 aagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtg 118213 Query: 251 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118214 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 118273 Query: 311 tgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 118274 tgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 118333 Query: 370 tcgaggcaaactctgaatactagatatg 397 ||||||||||||||||||||||| |||| Sbjct: 118334 tcgaggcaaactctgaatactaggtatg 118361 Score = 299 bits (151), Expect = 6e-78 Identities = 203/219 (92%), Gaps = 1/219 (0%) Strand = Plus / Minus Query: 420 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 479 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 480 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 539 |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggt-aagagtgcaaagacag 150159 Query: 540 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 599 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 150158 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaa 150099 Query: 600 gcgcccttgcgctgaagatgaacggggctaagcgatctg 638 |||| ||||||| ||||||||| ||| ||||||| |||| Sbjct: 150098 gcgctcttgcgccgaagatgaatgggactaagcggtctg 150060 Score = 299 bits (151), Expect = 6e-78 Identities = 203/219 (92%), Gaps = 1/219 (0%) Strand = Plus / Plus Query: 420 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 479 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 480 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 539 |||||||||||||||||||||||||||||||| |||||||||| | | ||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagag-tgcaaagacag 118507 Query: 540 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 599 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 118508 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaa 118567 Query: 600 gcgcccttgcgctgaagatgaacggggctaagcgatctg 638 |||| ||||||| ||||||||| ||| ||||||| |||| Sbjct: 118568 gcgctcttgcgccgaagatgaatgggactaagcggtctg 118606
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 611 bits (308), Expect = e-171 Identities = 369/388 (95%), Gaps = 6/388 (1%) Strand = Plus / Plus Query: 11 ggatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 70 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 558 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggt 617 Query: 71 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 130 |||||||| |||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 618 taagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcac 672 Query: 131 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 190 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 673 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaact 732 Query: 191 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 250 ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 733 aagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtg 792 Query: 251 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 793 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 852 Query: 311 tgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 853 tgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 912 Query: 370 tcgaggcaaactctgaatactagatatg 397 ||||||||||||||||||||||| |||| Sbjct: 913 tcgaggcaaactctgaatactaggtatg 940 Score = 299 bits (151), Expect = 6e-78 Identities = 203/219 (92%), Gaps = 1/219 (0%) Strand = Plus / Plus Query: 420 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 479 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 480 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 539 |||||||||||||||||||||||||||||||| |||||||||| | | ||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagag-tgcaaagacag 1086 Query: 540 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 599 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 1087 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaa 1146 Query: 600 gcgcccttgcgctgaagatgaacggggctaagcgatctg 638 |||| ||||||| ||||||||| ||| ||||||| |||| Sbjct: 1147 gcgctcttgcgccgaagatgaatgggactaagcggtctg 1185
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 593 bits (299), Expect = e-166 Identities = 366/386 (94%), Gaps = 3/386 (0%) Strand = Plus / Plus Query: 11 ggatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 70 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 542 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggt 601 Query: 71 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 130 |||||||| | | ||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 602 taagggaaagaa--ccaccggagccatagcgaaagcgagtcttcccagggcaattgtcac 659 Query: 131 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 190 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 660 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaact 719 Query: 191 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 250 ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 720 aagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtg 779 Query: 251 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 310 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 780 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcaacagt 839 Query: 311 tgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 ||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 840 tgactggactatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaa 899 Query: 370 tcgaggcaaactctgaatactagata 395 ||||||||||||||||||||| |||| Sbjct: 900 tcgaggcaaactctgaatactggata 925 Score = 280 bits (141), Expect = 5e-72 Identities = 196/213 (92%), Gaps = 1/213 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 ||||||||||||||||||||| |||| | |||||||| |||| ||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtagggg-tgcaaagacagccagga 1073 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 |||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1074 ggtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1133 Query: 606 ttgcgctgaagatgaacggggctaagcgatctg 638 |||||| ||||||||| ||| ||||||| |||| Sbjct: 1134 ttgcgccgaagatgaatgggactaagcggtctg 1166
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 589 bits (297), Expect = e-165 Identities = 336/349 (96%), Gaps = 5/349 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 149 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 150 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 204 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 205 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 264 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 324 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 325 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 384 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 363 ||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 385 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggt 433
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 585 bits (295), Expect = e-164 Identities = 429/471 (91%), Gaps = 2/471 (0%) Strand = Plus / Minus Query: 168 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 227 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 228 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 287 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 288 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 347 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 348 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 407 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 408 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 467 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 468 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 527 ||| || |||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgataaaggaggt-aggg 2754 Query: 528 gtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatag 587 |||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||| Sbjct: 2753 gtgcaaagacagccaggaggtttgcctagaagcaaccacccttgaaaaagtgcgtaatag 2694 Query: 588 ctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 638 |||||| ||||||||| ||||| | |||||||| ||||||||||||||| Sbjct: 2693 ctcactaatcgagcgcacttgcaccaaagatgaattgggctaagcgatctg 2643 Score = 157 bits (79), Expect = 5e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 135 tatggacccgaacct 149 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 569 bits (287), Expect = e-159 Identities = 323/335 (96%), Gaps = 5/335 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 145 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 146 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 200 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 201 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 260 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 320 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 321 gccactcgaacccagagctagctggctctccccgaaatgcgttgaggcgcagcggttgac 380 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgg 349 ||||||||||||||||||||||||||||||||||| Sbjct: 381 tggacatctaggggtaaagcactgtttcggtgcgg 415
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 543 bits (274), Expect = e-151 Identities = 280/282 (99%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75141 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 75082 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 75081 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 75022 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75021 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 74962 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74961 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 74902 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatg 293 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 74901 aatgccactcgaacccagagctagctggttctccccgaaatg 74860 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Plus Query: 535 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 401437 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 401496 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 456 gtcgagagggaaacagcccggatc 479 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 543 bits (274), Expect = e-151 Identities = 280/282 (99%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382397 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 382456 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 382457 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 382516 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382517 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 382576 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382577 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 382636 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatg 293 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 382637 aatgccactcgaacccagagctagctggttctccccgaaatg 382678 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Minus Query: 535 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 282982 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 282923 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Minus Query: 535 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 154290 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 154231 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 456 gtcgagagggaaacagcccggatc 479 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 456 gtcgagagggaaacagcccggatc 479 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 543 bits (274), Expect = e-151 Identities = 280/282 (99%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113232 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 113173 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 113172 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 113113 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113112 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 113053 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113052 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 112993 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatg 293 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 112992 aatgccactcgaacccagagctagctggttctccccgaaatg 112951 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Plus Query: 535 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 294071 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 294130 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 456 gtcgagagggaaacagcccggatc 479 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 543 bits (274), Expect = e-151 Identities = 283/286 (98%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367914 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 367855 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 367854 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 367795 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367794 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 367735 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367734 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 367675 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgtt 297 ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 367674 aatgccactcgaacccagagctagctggttctccccgaaattcgtt 367629 Score = 543 bits (274), Expect = e-151 Identities = 283/286 (98%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184519 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 184460 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 184459 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 184400 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184399 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 184340 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184339 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 184280 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgtt 297 ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 184279 aatgccactcgaacccagagctagctggttctccccgaaattcgtt 184234 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Plus Query: 535 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 266906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 266965 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 456 gtcgagagggaaacagcccggatc 479 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 529 bits (267), Expect = e-147 Identities = 274/275 (99%), Gaps = 1/275 (0%) Strand = Plus / Minus Query: 364 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 424 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 484 gctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 543 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggt-gggggtgcaaagacagccag 341 Query: 544 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 603 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 281 Query: 604 ccttgcgctgaagatgaacggggctaagcgatctg 638 ||||||||||||||||||||||||||||||||||| Sbjct: 280 ccttgcgctgaagatgaacggggctaagcgatctg 246
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 523 bits (264), Expect = e-145 Identities = 357/384 (92%), Gaps = 3/384 (0%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 144479 gatctctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggtt 144538 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||| | ||||| |||||||||||||||||||||||||| | |||| |||||||| Sbjct: 144539 aagggggag-aaccc-ccggagccgtagcgaaagcgagtcttgctggggcaattgtcacc 144596 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 144597 gcttataaacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 144656 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 144657 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 144716 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144717 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 144776 Query: 312 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 370 |||| || |||||||||||||||||| ||| |||||||||||||| |||||||||||||| Sbjct: 144777 gactagaccatctaggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaat 144836 Query: 371 cgaggcaaactctgaatactagat 394 |||||||||||||||||||||||| Sbjct: 144837 cgaggcaaactctgaatactagat 144860 Score = 523 bits (264), Expect = e-145 Identities = 357/384 (92%), Gaps = 3/384 (0%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 88372 gatctctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggtt 88313 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||||| | ||||| |||||||||||||||||||||||||| | |||| |||||||| Sbjct: 88312 aagggggag-aaccc-ccggagccgtagcgaaagcgagtcttgctggggcaattgtcacc 88255 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 88254 gcttataaacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 88195 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 88194 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 88135 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88134 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 88075 Query: 312 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 370 |||| || |||||||||||||||||| ||| |||||||||||||| |||||||||||||| Sbjct: 88074 gactagaccatctaggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaat 88015 Query: 371 cgaggcaaactctgaatactagat 394 |||||||||||||||||||||||| Sbjct: 88014 cgaggcaaactctgaatactagat 87991 Score = 295 bits (149), Expect = 9e-77 Identities = 198/213 (92%), Gaps = 1/213 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 |||||||||||||||||||||||||| |||||||||| || | ||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggag-tgcaaagacagccagga 145017 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 145018 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 145077 Query: 606 ttgcgctgaagatgaacggggctaagcgatctg 638 |||||| |||||||| |||| ||||||| |||| Sbjct: 145078 ttgcgccgaagatgagcgggactaagcggtctg 145110 Score = 295 bits (149), Expect = 9e-77 Identities = 198/213 (92%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 |||||||||||||||||||||||||| |||||||||| || | ||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggag-tgcaaagacagccagga 87834 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 87833 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 87774 Query: 606 ttgcgctgaagatgaacggggctaagcgatctg 638 |||||| |||||||| |||| ||||||| |||| Sbjct: 87773 ttgcgccgaagatgagcgggactaagcggtctg 87741
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 523 bits (264), Expect = e-145 Identities = 311/324 (95%), Gaps = 2/324 (0%) Strand = Plus / Plus Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 375 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 434 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 435 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 495 taaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcct 554 ||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 497 taaatgatcgctcagtgataaaggaggt-aggggtgc-gagacagccaggaggtttgcct 554 Query: 555 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 614 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 555 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 614 Query: 615 agatgaacggggctaagcgatctg 638 |||||||||||||||||||||||| Sbjct: 615 agatgaacggggctaagcgatctg 638 Score = 420 bits (212), Expect = e-114 Identities = 267/284 (94%), Gaps = 6/284 (2%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 73 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 74 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 133 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 134 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 193 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 194 Query: 194 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 254 Query: 254 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 297 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 298
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 521 bits (263), Expect = e-145 Identities = 359/387 (92%), Gaps = 8/387 (2%) Strand = Plus / Minus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 |||| || |||||||||||||||||| |||||||||| ||||||| |||||||||| Sbjct: 5927 agggcac-----ccaccggagccgtagcgagagcgagtcttcatagggcaattgtcactg 5873 Query: 133 ctt-atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5872 ctttatggacccgaacctgggtgatctatccatgaccaggatgaagct-ggatgaaacta 5814 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 || |||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 5813 agtagaggtccgaaccgactgatgttgcaaaatcagcggatgagttgtggttaggggtga 5754 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5753 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 5694 Query: 312 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 370 ||||||| | ||||||||||||||||||||||||| ||| | | |||||||| | || Sbjct: 5693 gactggaccgtctaggggtaaagcactgtttcggtataggccgtgtaagcggtacgacat 5634 Query: 371 cgaggcaaactctgaatactagatatg 397 ||||||||||| ||||||||||||||| Sbjct: 5633 cgaggcaaactatgaatactagatatg 5607 Score = 276 bits (139), Expect = 8e-71 Identities = 200/219 (91%), Gaps = 1/219 (0%) Strand = Plus / Minus Query: 420 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 479 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 480 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 539 ||||| |||||||||||||||||||||||||||| ||||| || | |||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgt-atgagtgcaaagacag 5484 Query: 540 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 599 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 5483 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcga 5424 Query: 600 gcgcccttgcgctgaagatgaacggggctaagcgatctg 638 |||| ||||| | ||||||||||||| |||||||||||| Sbjct: 5423 gcgctcttgcaccgaagatgaacgggactaagcgatctg 5385
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 509 bits (257), Expect = e-141 Identities = 528/613 (86%), Gaps = 9/613 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 375 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 432 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaagtttgc 1074 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 613 gaagatgaacggg 625 ||| ||||||||| Sbjct: 1135 gaatatgaacggg 1147
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 509 bits (257), Expect = e-141 Identities = 528/613 (86%), Gaps = 9/613 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 375 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 432 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaagtttgc 1074 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 613 gaagatgaacggg 625 ||| ||||||||| Sbjct: 1135 gaatatgaacggg 1147
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 509 bits (257), Expect = e-141 Identities = 528/613 (86%), Gaps = 9/613 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 375 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 432 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaagtttgc 1074 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 613 gaagatgaacggg 625 ||| ||||||||| Sbjct: 1135 gaatatgaacggg 1147
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 509 bits (257), Expect = e-141 Identities = 528/613 (86%), Gaps = 9/613 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 375 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 432 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaagtttgc 1073 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1133 Query: 613 gaagatgaacggg 625 ||| ||||||||| Sbjct: 1134 gaatatgaacggg 1146
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 509 bits (257), Expect = e-141 Identities = 528/613 (86%), Gaps = 9/613 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 375 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 432 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaagtttgc 1074 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 613 gaagatgaacggg 625 ||| ||||||||| Sbjct: 1135 gaatatgaacggg 1147
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 509 bits (257), Expect = e-141 Identities = 528/613 (86%), Gaps = 9/613 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 375 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 432 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaagtttgc 1074 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 613 gaagatgaacggg 625 ||| ||||||||| Sbjct: 1135 gaatatgaacggg 1147
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 509 bits (257), Expect = e-141 Identities = 528/613 (86%), Gaps = 9/613 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 375 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 432 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaagtttgc 1074 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 613 gaagatgaacggg 625 ||| ||||||||| Sbjct: 1135 gaatatgaacggg 1147
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 509 bits (257), Expect = e-141 Identities = 528/613 (86%), Gaps = 9/613 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 375 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 432 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaagtttgc 1074 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 613 gaagatgaacggg 625 ||| ||||||||| Sbjct: 1135 gaatatgaacggg 1147
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 509 bits (257), Expect = e-141 Identities = 528/613 (86%), Gaps = 9/613 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 375 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 432 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaagtttgc 1074 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaaggagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 613 gaagatgaacggg 625 ||| ||||||||| Sbjct: 1135 gaatatgaacggg 1147
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 502 bits (253), Expect = e-139 Identities = 527/613 (85%), Gaps = 9/613 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 375 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 432 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaagtttgc 1074 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 ||||||| |||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaggccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 613 gaagatgaacggg 625 ||| ||||||||| Sbjct: 1135 gaatatgaacggg 1147
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 502 bits (253), Expect = e-139 Identities = 527/613 (85%), Gaps = 9/613 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 375 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 432 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaagtttgc 1073 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1133 Query: 613 gaagatgaacggg 625 ||| ||||||||| Sbjct: 1134 gaatatgaacggg 1146
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 502 bits (253), Expect = e-139 Identities = 527/613 (85%), Gaps = 9/613 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 375 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 432 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | |||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaagcttgc 1074 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 613 gaagatgaacggg 625 ||| ||||||||| Sbjct: 1135 gaatatgaacggg 1147
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 502 bits (253), Expect = e-139 Identities = 528/613 (86%), Gaps = 10/613 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gtt-ac 834 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 375 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 432 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaagtttgc 1073 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1133 Query: 613 gaagatgaacggg 625 ||| ||||||||| Sbjct: 1134 gaatatgaacggg 1146
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 502 bits (253), Expect = e-139 Identities = 527/613 (85%), Gaps = 9/613 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 | || ||||||||| |||||||||||||||||||||||||||| ||||| || ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgtt-ac 835 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 375 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 432 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaagtttgc 1074 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 613 gaagatgaacggg 625 ||| ||||||||| Sbjct: 1135 gaatatgaacggg 1147
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 494 bits (249), Expect = e-136 Identities = 526/613 (85%), Gaps = 9/613 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || | Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtatcc 836 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 | || ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 837 ag-acctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 375 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 432 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 433 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 492 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 493 cctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgc 552 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaagtttgc 1074 Query: 553 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 612 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 613 gaagatgaacggg 625 ||| ||||||||| Sbjct: 1135 gaatatgaacggg 1147
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 494 bits (249), Expect = e-136 Identities = 256/257 (99%), Gaps = 1/257 (0%) Strand = Plus / Plus Query: 382 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 442 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 502 ccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagca 561 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagca 179 Query: 562 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 621 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 239 Query: 622 cggggctaagcgatctg 638 ||||||||||||||||| Sbjct: 240 cggggctaagcgatctg 256
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 488 bits (246), Expect = e-134 Identities = 276/286 (96%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 594 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 595 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 649 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 650 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 709 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 769 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgag 300 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 gccactcgaacccagagctagctggttctccccgaaatgcgttgag 815
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 437/497 (87%), Gaps = 4/497 (0%) Strand = Plus / Plus Query: 131 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 190 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 191 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 250 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 251 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 310 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 311 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 370 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 371 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 428 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 429 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 488 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 489 ggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggt 548 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaagt 1070 Query: 549 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 608 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 609 cgctgaagatgaacggg 625 || ||| ||||||||| Sbjct: 1131 tgccgaatatgaacggg 1147 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 75 gg 76 || Sbjct: 602 gg 603
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 484 bits (244), Expect = e-133 Identities = 349/381 (91%), Gaps = 6/381 (1%) Strand = Plus / Plus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 560 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 619 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 ||| | ||| || |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 620 aggcga--gaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgtcactg 674 Query: 133 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 192 |||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| | || Sbjct: 675 cttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagccaa 734 Query: 193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 252 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 735 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 794 Query: 253 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 795 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 854 Query: 313 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 855 actggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 914 Query: 372 gaggcaaactctgaatactag 392 ||||||||||||||||||||| Sbjct: 915 gaggcaaactctgaatactag 935 Score = 307 bits (155), Expect = 2e-80 Identities = 204/219 (93%), Gaps = 1/219 (0%) Strand = Plus / Plus Query: 420 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 479 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 480 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 539 |||||||||||||||||||||||||||||||| |||||||||| | | ||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagag-tgcaaagacag 1064 Query: 540 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 599 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1065 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcga 1124 Query: 600 gcgcccttgcgctgaagatgaacggggctaagcgatctg 638 |||| ||||||| ||||||||||||| ||||||| |||| Sbjct: 1125 gcgctcttgcgccgaagatgaacgggactaagcggtctg 1163
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 484 bits (244), Expect = e-133 Identities = 349/381 (91%), Gaps = 6/381 (1%) Strand = Plus / Plus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 573 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 632 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 ||| | ||| || |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 633 aggcga--gaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgtcactg 687 Query: 133 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 192 |||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| | || Sbjct: 688 cttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagccaa 747 Query: 193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 252 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 748 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 807 Query: 253 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 808 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 867 Query: 313 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 868 actggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 927 Query: 372 gaggcaaactctgaatactag 392 ||||||||||||||||||||| Sbjct: 928 gaggcaaactctgaatactag 948 Score = 307 bits (155), Expect = 2e-80 Identities = 204/219 (93%), Gaps = 1/219 (0%) Strand = Plus / Plus Query: 420 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 479 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 480 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 539 |||||||||||||||||||||||||||||||| |||||||||| | | ||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagag-tgcaaagacag 1077 Query: 540 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 599 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1078 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcga 1137 Query: 600 gcgcccttgcgctgaagatgaacggggctaagcgatctg 638 |||| ||||||| ||||||||||||| ||||||| |||| Sbjct: 1138 gcgctcttgcgccgaagatgaacgggactaagcggtctg 1176
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 480 bits (242), Expect = e-132 Identities = 350/382 (91%), Gaps = 8/382 (2%) Strand = Plus / Plus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 677 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 736 Query: 73 agggaacg-gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 ||| || ||| || |||||||||||||||||||||||| |||||||| ||||||| Sbjct: 737 agg---cgtgaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgtcact 790 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 ||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| | | Sbjct: 791 gcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagcca 850 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 || ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 851 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtga 910 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 911 aatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 970 Query: 312 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 370 |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 971 gactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaat 1030 Query: 371 cgaggcaaactctgaatactag 392 |||||||||||||||||||||| Sbjct: 1031 cgaggcaaactctgaatactag 1052 Score = 299 bits (151), Expect = 6e-78 Identities = 203/219 (92%), Gaps = 1/219 (0%) Strand = Plus / Plus Query: 420 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 479 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 480 accagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 539 |||||||||||||||||||||||||||||||| |||||||||| | | ||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagag-tgcaaagacag 1181 Query: 540 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 599 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1182 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcga 1241 Query: 600 gcgcccttgcgctgaagatgaacggggctaagcgatctg 638 |||| ||||||| ||||||||||||| ||||||| |||| Sbjct: 1242 gcgctcttgcgccgaagatgaacgggactaagcggtctg 1280
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 77 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 78 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 137 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 138 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 197 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 740 Query: 198 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 257 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 258 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 317 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 318 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 376 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 377 aaactctgaatactagatatg 397 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 204 bits (103), Expect = 3e-49 Identities = 185/211 (87%), Gaps = 1/211 (0%) Strand = Plus / Plus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 |||||||||||||| | |||| |||| |||||||||| | | |||| ||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagag-tgcagagacagccagg 1069 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 |||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| Sbjct: 1070 aggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgct 1129 Query: 605 cttgcgctgaagatgaacggggctaagcgat 635 ||||||| ||||||||| ||| ||||||||| Sbjct: 1130 cttgcgccgaagatgaatgggactaagcgat 1160
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 77 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 78 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 137 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 138 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 197 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 3715 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 3774 Query: 198 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 257 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3775 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 3834 Query: 258 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 317 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 3835 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 3894 Query: 318 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 376 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 3895 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 3954 Query: 377 aaactctgaatactagatatg 397 ||||||||||||||| ||||| Sbjct: 3955 aaactctgaatactaaatatg 3975 Score = 212 bits (107), Expect = 1e-51 Identities = 186/211 (88%), Gaps = 1/211 (0%) Strand = Plus / Plus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 |||||||||||||| | |||| |||| |||||||||| | | |||| ||||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagag-tgcagagacagccagg 4103 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 |||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| Sbjct: 4104 aggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgct 4163 Query: 605 cttgcgctgaagatgaacggggctaagcgat 635 ||||||| ||||||||||||| ||||||||| Sbjct: 4164 cttgcgccgaagatgaacgggactaagcgat 4194
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 621 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 622 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 675 Query: 133 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 192 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||||| || Sbjct: 676 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaaaccaa 735 Query: 193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 252 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 795 Query: 253 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 796 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 855 Query: 313 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 856 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 915 Query: 372 gaggcaaactctgaatactag 392 ||||||||||||||||||||| Sbjct: 916 gaggcaaactctgaatactag 936 Score = 289 bits (146), Expect = 6e-75 Identities = 198/214 (92%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 ||||||||||||||||||||||||||| |||||||||| | | |||| ||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagag-tgcagagacagccagg 1071 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1072 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgct 1131 Query: 605 cttgcgctgaagatgaacggggctaagcgatctg 638 ||||||| ||||||||||||| ||||||| |||| Sbjct: 1132 cttgcgccgaagatgaacgggactaagcggtctg 1165
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 476 bits (240), Expect = e-131 Identities = 351/385 (91%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 579 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataagtagtggcctggttaag 638 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 | |||| ||||||||||| |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 639 g----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggcaaatgtcattgct 693 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||| |||||||| ||||||||||| |||||||||||||||| |||| |||||||||| Sbjct: 694 tatgtacccgaacttgggtgatctaaccatgaccaggatgaaatttggttgaaactaagt 753 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 813 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||| ||||||||| |||||||||||||||||||||||||||| ||| ||||||||| || Sbjct: 814 gccaatcgaacccaaagctagctggttctccccgaaatgcgtttaggggcagcagtt-ac 872 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||| Sbjct: 873 cggacatctaggggtaaagcactgtttcggtgcgggtctcgagagcggtaccaaattgag 932 Query: 375 gcaaactctgaatactagatatgac 399 ||||||| ||||||||||||||||| Sbjct: 933 gcaaactatgaatactagatatgac 957 Score = 287 bits (145), Expect = 2e-74 Identities = 197/213 (92%), Gaps = 1/213 (0%) Strand = Plus / Plus Query: 424 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 483 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 484 gctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 543 ||||||||||||||||||||||| ||| ||||||||||| |||| |||| |||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtagggg-tgcatagacagccag 1118 Query: 544 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 603 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1119 gaggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgc 1178 Query: 604 ccttgcgctgaagatgaacggggctaagcgatc 636 ||||||| ||| ||||||||| ||||||||| Sbjct: 1179 tcttgcgccgaatatgaacgggaataagcgatc 1211
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 470 bits (237), Expect = e-129 Identities = 347/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 77 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 78 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 137 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 138 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 197 ||||||||||| ||||||||||||||||||||||||||||||||| | |||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaagtgga 740 Query: 198 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 257 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 258 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 317 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 318 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 376 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 377 aaactctgaatactagatatg 397 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 204 bits (103), Expect = 3e-49 Identities = 185/211 (87%), Gaps = 1/211 (0%) Strand = Plus / Plus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 |||||||||||||| | |||| |||| |||||||||| | | |||| ||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagag-tgcagagacagccagg 1069 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 |||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| Sbjct: 1070 aggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgct 1129 Query: 605 cttgcgctgaagatgaacggggctaagcgat 635 ||||||| ||||||||| ||| ||||||||| Sbjct: 1130 cttgcgccgaagatgaatgggactaagcgat 1160
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 462 bits (233), Expect = e-127 Identities = 346/381 (90%), Gaps = 7/381 (1%) Strand = Plus / Minus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 124703 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 124644 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 124643 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 124590 Query: 133 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 192 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | || Sbjct: 124589 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagccaa 124530 Query: 193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 252 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 124529 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 124470 Query: 253 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 124469 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 124410 Query: 313 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 124409 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 124350 Query: 372 gaggcaaactctgaatactag 392 ||| ||||||||||||||||| Sbjct: 124349 gagtcaaactctgaatactag 124329 Score = 462 bits (233), Expect = e-127 Identities = 346/381 (90%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 95163 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 95222 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 95223 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 95276 Query: 133 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 192 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | || Sbjct: 95277 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagccaa 95336 Query: 193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 252 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 95337 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 95396 Query: 253 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95397 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 95456 Query: 313 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95457 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 95516 Query: 372 gaggcaaactctgaatactag 392 ||| ||||||||||||||||| Sbjct: 95517 gagtcaaactctgaatactag 95537 Score = 289 bits (146), Expect = 6e-75 Identities = 198/214 (92%), Gaps = 1/214 (0%) Strand = Plus / Minus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 ||||||||||||||||||||||||||| |||||||||| | | |||| ||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagag-tgcagagacagccagg 124194 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 124193 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgct 124134 Query: 605 cttgcgctgaagatgaacggggctaagcgatctg 638 ||||||| ||||||||||||| ||||||| |||| Sbjct: 124133 cttgcgccgaagatgaacgggactaagcggtctg 124100 Score = 289 bits (146), Expect = 6e-75 Identities = 198/214 (92%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 ||||||||||||||||||||||||||| |||||||||| | | |||| ||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagag-tgcagagacagccagg 95672 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95673 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgct 95732 Query: 605 cttgcgctgaagatgaacggggctaagcgatctg 638 ||||||| ||||||||||||| ||||||| |||| Sbjct: 95733 cttgcgccgaagatgaacgggactaagcggtctg 95766
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4606 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 4665 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4666 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 4724 Query: 133 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 192 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 4725 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 4784 Query: 193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 252 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 4785 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 4844 Query: 253 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 4845 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 4904 Query: 313 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 4905 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 4964 Query: 372 gaggcaaactctgaatact 390 ||||||||||||||||||| Sbjct: 4965 gaggcaaactctgaatact 4983 Score = 244 bits (123), Expect = 3e-61 Identities = 190/211 (90%), Gaps = 1/211 (0%) Strand = Plus / Plus Query: 428 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 487 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 488 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 547 ||||||||||||| ||||| |||| ||||||||||||| | |||||||||| ||| ||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggag-tgcaaagacaatcagtagg 5123 Query: 548 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 607 |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||| Sbjct: 5124 tttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctt 5183 Query: 608 gcgctgaagatgaacggggctaagcgatctg 638 |||| ||||||||||||| ||||||| |||| Sbjct: 5184 gcgccgaagatgaacgggactaagcggtctg 5214
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 133 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 192 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 692 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 252 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 752 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 811 Query: 253 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 812 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 871 Query: 313 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 872 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 931 Query: 372 gaggcaaactctgaatact 390 ||||||||||||||||||| Sbjct: 932 gaggcaaactctgaatact 950 Score = 244 bits (123), Expect = 3e-61 Identities = 190/211 (90%), Gaps = 1/211 (0%) Strand = Plus / Plus Query: 428 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 487 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 488 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 547 ||||||||||||| ||||| |||| ||||||||||||| | |||||||||| ||| ||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggag-tgcaaagacaatcagtagg 1090 Query: 548 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 607 |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||| Sbjct: 1091 tttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctt 1150 Query: 608 gcgctgaagatgaacggggctaagcgatctg 638 |||| ||||||||||||| ||||||| |||| Sbjct: 1151 gcgccgaagatgaacgggactaagcggtctg 1181
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 133 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 192 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 692 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 252 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 752 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 811 Query: 253 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 812 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 871 Query: 313 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 872 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 931 Query: 372 gaggcaaactctgaatact 390 ||||||||||||||||||| Sbjct: 932 gaggcaaactctgaatact 950 Score = 236 bits (119), Expect = 7e-59 Identities = 189/211 (89%), Gaps = 1/211 (0%) Strand = Plus / Plus Query: 428 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 487 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 488 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 547 ||||||||||||| ||||| |||| ||||| ||||||| | |||||||||| ||| ||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggag-tgcaaagacaatcagtagg 1090 Query: 548 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 607 |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||| Sbjct: 1091 tttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctt 1150 Query: 608 gcgctgaagatgaacggggctaagcgatctg 638 |||| ||||||||||||| ||||||| |||| Sbjct: 1151 gcgccgaagatgaacgggactaagcggtctg 1181
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 420 bits (212), Expect = e-114 Identities = 343/384 (89%), Gaps = 2/384 (0%) Strand = Plus / Plus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 568 atctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatagtggctgggtta 627 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 |||||| | | || |||||| |||||||||| |||||| ||||| |||||||||| Sbjct: 628 agggaatttatgc-actggagccatagcgaaagcaagtcttttcagggctattgtcactg 686 Query: 133 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 192 |||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||| Sbjct: 687 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgaaactaa 746 Query: 193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 252 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 747 gtggaggtcccaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 806 Query: 253 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 807 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 866 Query: 313 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 ||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 867 actggactatccaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 926 Query: 372 gaggcaaactctgaatactagata 395 ||| ||||||||||||||| |||| Sbjct: 927 gagacaaactctgaatactggata 950 Score = 236 bits (119), Expect = 7e-59 Identities = 189/211 (89%), Gaps = 1/211 (0%) Strand = Plus / Plus Query: 428 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 487 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 488 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 547 ||||||||||||| ||||| |||| ||||||||||||| | |||||||||| ||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggag-tgcaaagacaatcaggagg 1085 Query: 548 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 607 |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1086 tttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctc 1145 Query: 608 gcgctgaagatgaacggggctaagcgatctg 638 |||| ||||||||| ||| ||||||| |||| Sbjct: 1146 gcgccgaagatgaatgggactaagcggtctg 1176
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 418 bits (211), Expect = e-114 Identities = 344/384 (89%), Gaps = 7/384 (1%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| Sbjct: 558 gatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggtt 617 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||| | | || ||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 618 aaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcact 672 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 | ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 673 gtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaactc 732 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 || || |||||||||||| ||||||||| |||| ||||||||||||||||||||||||| Sbjct: 733 agtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtga 792 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 793 aatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 852 Query: 312 gact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 | | || ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 853 ggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 912 Query: 370 tcgaggcaaactctgaatactaga 393 |||| ||||||||||||||||||| Sbjct: 913 tcgatgcaaactctgaatactaga 936 Score = 238 bits (120), Expect = 2e-59 Identities = 187/208 (89%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 ||||||||||||||| ||||| |||| |||||| ||| | | |||| ||||| |||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagag-tgcagagacaaccagga 1070 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1071 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 1130 Query: 606 ttgcgctgaagatgaacggggctaagcg 633 |||||| ||| ||| ||||| ||||||| Sbjct: 1131 ttgcgccgaaaatggacgggactaagcg 1158
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 418 bits (211), Expect = e-114 Identities = 344/384 (89%), Gaps = 7/384 (1%) Strand = Plus / Minus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| Sbjct: 115104 gatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggtt 115045 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||| | | || ||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 115044 aaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcact 114990 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 | ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 114989 gtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaactc 114930 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 || || |||||||||||| ||||||||| |||| ||||||||||||||||||||||||| Sbjct: 114929 agtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtga 114870 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 114869 aatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 114810 Query: 312 gact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 | | || ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 114809 ggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 114750 Query: 370 tcgaggcaaactctgaatactaga 393 |||| ||||||||||||||||||| Sbjct: 114749 tcgatgcaaactctgaatactaga 114726 Score = 418 bits (211), Expect = e-114 Identities = 344/384 (89%), Gaps = 7/384 (1%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| Sbjct: 86884 gatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggtt 86943 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||| | | || ||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 86944 aaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcact 86998 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 191 | ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 86999 gtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaactc 87058 Query: 192 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 251 || || |||||||||||| ||||||||| |||| ||||||||||||||||||||||||| Sbjct: 87059 agtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtga 87118 Query: 252 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 311 ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 87119 aatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 87178 Query: 312 gact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 369 | | || ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 87179 ggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 87238 Query: 370 tcgaggcaaactctgaatactaga 393 |||| ||||||||||||||||||| Sbjct: 87239 tcgatgcaaactctgaatactaga 87262 Score = 238 bits (120), Expect = 2e-59 Identities = 187/208 (89%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 ||||||||||||||| ||||| |||| |||||| || | | ||||| ||||| |||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgt-gagagtgcagagacaaccagga 114592 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 114591 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 114532 Query: 606 ttgcgctgaagatgaacggggctaagcg 633 |||||| ||| ||| ||||| ||||||| Sbjct: 114531 ttgcgccgaaaatggacgggactaagcg 114504 Score = 238 bits (120), Expect = 2e-59 Identities = 187/208 (89%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 ||||||||||||||| ||||| |||| |||||| ||| | | |||| ||||| |||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagag-tgcagagacaaccagga 87396 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 87397 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 87456 Query: 606 ttgcgctgaagatgaacggggctaagcg 633 |||||| ||| ||| ||||| ||||||| Sbjct: 87457 ttgcgccgaaaatggacgggactaagcg 87484
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 398 bits (201), Expect = e-108 Identities = 341/387 (88%), Gaps = 8/387 (2%) Strand = Plus / Plus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| |||||| Sbjct: 966 atctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcctggtta 1025 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 |||| | |||| |||||||||||||||||||| | |||||| |||||||| Sbjct: 1026 agggtat-------accgaagccgtagcgaaagcgagtcattcaagggcgcatgtcactg 1078 Query: 133 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 192 ||||||||||||||| |||||||||||||||| ||||| |||||||||| |||| | || Sbjct: 1079 tttatggacccgaacccgggtgatctatccatggccagggtgaagcttgggtgaagccaa 1138 Query: 193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 252 | |||| |||||||||||| ||||||| || ||||||||||| |||||||||||||||| Sbjct: 1139 gtggaggcccgaaccgactggtgttgaaaaaccagcggatgagctgtggttaggggtgaa 1198 Query: 253 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1199 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattg 1258 Query: 313 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 ||| || | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1259 actaaactgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 1318 Query: 372 gaggcaaactctgaatactagatatga 398 |||||||||||||||||||||| |||| Sbjct: 1319 gaggcaaactctgaatactagacatga 1345 Score = 278 bits (140), Expect = 2e-71 Identities = 195/212 (91%), Gaps = 1/212 (0%) Strand = Plus / Plus Query: 427 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 486 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 487 aaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggag 546 ||||||||||||||||||||||||| |||||||||| | | |||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagag-tgcaaagacagccaggag 1476 Query: 547 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 606 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1477 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 1536 Query: 607 tgcgctgaagatgaacggggctaagcgatctg 638 ||||| ||| ||||||||| ||||||| |||| Sbjct: 1537 tgcgccgaaaatgaacgggactaagcggtctg 1568
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 396 bits (200), Expect = e-107 Identities = 341/386 (88%), Gaps = 9/386 (2%) Strand = Plus / Plus Query: 13 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 72 |||||||||||||||||||||||||||||||||||||||| ||| | |||||| |||||| Sbjct: 519 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcctggtta 578 Query: 73 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 132 || ||| || ||||||||||||||||| |||| || | || || |||||||| Sbjct: 579 agagaat-------actggagccgtagcgaaagcaagtcatatttgg-cgcatgtcactg 630 Query: 133 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 192 |||| |||||||||| |||||||||||||||| ||||| |||| ||||| |||| | || Sbjct: 631 tttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggtgaagccaa 690 Query: 193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 252 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 691 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 750 Query: 253 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 312 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 751 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattg 810 Query: 313 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 | ||||| | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 811 attggactacttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 870 Query: 372 gaggcaaactctgaatactagatatg 397 ||||||||||||||||||||| |||| Sbjct: 871 gaggcaaactctgaatactaggtatg 896 Score = 293 bits (148), Expect = 4e-76 Identities = 197/212 (92%), Gaps = 1/212 (0%) Strand = Plus / Plus Query: 427 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 486 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 487 aaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggag 546 |||||||| |||||||||||||||||||||||||||||| | |||||||||| ||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggag-tgcaaagacatccaggag 1030 Query: 547 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 606 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1031 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 1090 Query: 607 tgcgctgaagatgaacggggctaagcgatctg 638 ||||| ||||||||| ||| ||||||| |||| Sbjct: 1091 tgcgccgaagatgaatgggactaagcggtctg 1122
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 385 bits (194), Expect = e-103 Identities = 201/202 (99%), Gaps = 1/202 (0%) Strand = Plus / Minus Query: 437 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 497 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 556 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtggggg-tgcaaagacagccaggaggtttgcctag 63771 Query: 557 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63770 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 63711 Query: 617 atgaacggggctaagcgatctg 638 |||||||||||||||||||||| Sbjct: 63710 atgaacggggctaagcgatctg 63689
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 377 bits (190), Expect = e-101 Identities = 336/381 (88%), Gaps = 9/381 (2%) Strand = Plus / Plus Query: 17 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 76 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 77 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 134 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 745 tatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagt 804 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 805 ggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaat 864 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga- 313 |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 865 gccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgat 924 Query: 314 -ctg-gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 371 || | ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 925 gttgagctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 984 Query: 372 gaggcaaactctgaatactag 392 | ||||||| ||||||||| Sbjct: 985 gtagcaaactaagaatactag 1005 Score = 190 bits (96), Expect = 4e-45 Identities = 181/208 (87%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| |||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtgagaa-tgctgaaacaaccagga 1141 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||| ||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 1142 ggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttc 1201 Query: 606 ttgcgctgaagatgaacggggctaagcg 633 |||||| ||| ||||||||| ||||||| Sbjct: 1202 ttgcgccgaaaatgaacgggactaagcg 1229
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 375 bits (189), Expect = e-100 Identities = 196/197 (99%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 442 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 502 ccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagca 561 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtggggg-tgcaaagacagccaggaggtttgcctagaagca 119 Query: 562 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 621 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 179 Query: 622 cggggctaagcgatctg 638 ||||||||||||||||| Sbjct: 180 cggggctaagcgatctg 196
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 373 bits (188), Expect = e-100 Identities = 338/385 (87%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||| |||||| ||||||||||||| |||||||||||| | |||||| |||||||| Sbjct: 554 ctctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggcctggttaag 613 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 | |||| ||||||||||| |||||||||| |||||| |||||| | ||||| |||| Sbjct: 614 g----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggaaaatgtcattgct 668 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 | ||||||||||| ||||||||||| |||||||||||||| | |||| | |||||||| Sbjct: 669 tgtggacccgaacttgggtgatctaaccatgaccaggatgcaatttggttaaaactaagt 728 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 gggggtctgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 788 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||| ||||||||| ||||||||||||| ||||||||||| || ||||||||||||| || Sbjct: 789 gccaatcgaacccaaagctagctggttcgccccgaaatgcatttaggcgcagcagtt-ac 847 Query: 315 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 || ||||||||||||||||| ||||| |||||||| || |||||||||||||| ||| Sbjct: 848 cgggcatctaggggtaaagcattgttttggtgcgggtcacgagagcggtaccaaattgag 907 Query: 375 gcaaactctgaatactagatatgac 399 ||| ||| ||||||||||||||||| Sbjct: 908 gcagactatgaatactagatatgac 932 Score = 188 bits (95), Expect = 2e-44 Identities = 170/194 (87%), Gaps = 2/194 (1%) Strand = Plus / Plus Query: 402 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 461 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 462 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 521 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 522 tggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcg 581 | ||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| Sbjct: 1064 t--agggtgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgca 1121 Query: 582 taatagctcactga 595 |||||||| ||||| Sbjct: 1122 taatagctaactga 1135
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 345 bits (174), Expect = 1e-91 Identities = 229/246 (93%), Gaps = 1/246 (0%) Strand = Plus / Minus Query: 393 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 452 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 453 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 512 ||| || || ||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct: 580 atcatctcgaaagaaacagcccggatccccagctaaggcccttaaatgaccgctcaatga 521 Query: 513 taaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 572 ||||||||||||||| ||||||| |||||| || |||||||||||||||||||||||||| Sbjct: 520 taaaggaggtggggg-tgcaaagccagccatgaagtttgcctagaagcagccacccttta 462 Query: 573 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 632 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 402 Query: 633 gatctg 638 |||||| Sbjct: 401 gatctg 396
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 345 bits (174), Expect = 1e-91 Identities = 196/202 (97%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 390 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 449 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 450 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 509 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 510 tgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 569 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggt-gggggtgcaaagatagccaggaggtttgcctagaagcagccaccct 19153008 Query: 570 ttaaagagtgcgtaatagctca 591 ||||||||||||| ||| |||| Sbjct: 19153009 ttaaagagtgcgttatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 345 bits (174), Expect = 1e-91 Identities = 196/202 (97%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 390 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 449 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 450 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 509 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 510 tgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 569 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggt-gggggtgcaaagatagccaggaggtttgcctagaagcagccaccct 76403 Query: 570 ttaaagagtgcgtaatagctca 591 ||||||||||||| ||| |||| Sbjct: 76404 ttaaagagtgcgttatatctca 76425
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 337 bits (170), Expect = 3e-89 Identities = 329/379 (86%), Gaps = 6/379 (1%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 77 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 78 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 137 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 138 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 197 ||||||||||| |||||||||| |||||||||||||||||||| | | |||| || || Sbjct: 830 ggacccgaacccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggagtgga 889 Query: 198 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 257 |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 890 agtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 949 Query: 258 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tg 316 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || || Sbjct: 950 aatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtg 1009 Query: 317 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 375 | | ||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 1010 ggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtag 1069 Query: 376 caaactctgaatactagat 394 |||||| ||||||||||| Sbjct: 1070 caaactaagaatactagat 1088 Score = 224 bits (113), Expect = 3e-55 Identities = 189/213 (88%), Gaps = 1/213 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| |||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtgagaa-tgcagaaacaaccagga 1221 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| | Sbjct: 1222 ggtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttc 1281 Query: 606 ttgcgctgaagatgaacggggctaagcgatctg 638 |||||| ||| ||||||||| ||||||| |||| Sbjct: 1282 ttgcgccgaaaatgaacgggactaagcggtctg 1314
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 337 bits (170), Expect = 3e-89 Identities = 278/311 (89%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 88 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 145 |||||||| ||||||||||||||| |||||||| || |||||| |||||||||||| Sbjct: 632 ccggagccaaagcgaaagcgagtctgaatagggcacttttgtcactttttatggacccga 691 Query: 146 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 205 ||| |||||||||| |||||||||||||||||||||| | |||| ||| |||||||||| Sbjct: 692 acccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaa 751 Query: 206 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 265 ||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 752 ccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaac 811 Query: 266 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-at 321 | ||||||||||||||||||||||||||||||||||||||| |||||| ||| | || Sbjct: 812 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctat 871 Query: 322 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 381 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 872 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaact 931 Query: 382 ctgaatactag 392 ||||||||| Sbjct: 932 aagaatactag 942 Score = 238 bits (120), Expect = 2e-59 Identities = 187/208 (89%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 ||||||||||||||| ||||| ||||||||||||||| | | ||| | ||| |||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggt-gagaatgctgaaacaaccagga 1078 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| | Sbjct: 1079 ggtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttc 1138 Query: 606 ttgcgctgaagatgaacggggctaagcg 633 |||||| ||| ||||||||| ||||||| Sbjct: 1139 ttgcgccgaaaatgaacgggactaagcg 1166 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 75 ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgacttatagaaagtggcttggttaagg 623
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 327 bits (165), Expect = 3e-86 Identities = 277/313 (88%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 87 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 146 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 147 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 206 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 207 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 266 |||||| ||||||| || || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 712 cgactggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaact 771 Query: 267 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctag 325 | ||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||| Sbjct: 772 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttag 831 Query: 326 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 385 |||||||||||||||||||||||||||| | | ||||||||||| || ||||||||||| Sbjct: 832 gggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctga 891 Query: 386 atactagatatga 398 |||||| |||||| Sbjct: 892 atactaaatatga 904 Score = 281 bits (142), Expect = 1e-72 Identities = 197/214 (92%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 ||||||||||||||||||||| |||||||||||| ||| | | |||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagag-tgcaaagacagccagg 1033 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 1034 aggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgct 1093 Query: 605 cttgcgctgaagatgaacggggctaagcgatctg 638 ||||||| ||||||||| ||| ||||||| |||| Sbjct: 1094 cttgcgccgaagatgaatgggactaagcggtctg 1127 Score = 103 bits (52), Expect = 7e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 16 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 75 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 528 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagg 587
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 323 bits (163), Expect = 4e-85 Identities = 188/195 (96%), Gaps = 1/195 (0%) Strand = Plus / Plus Query: 444 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 504 gctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagc 563 ||||||||||||||||||| |||| |||| ||||| |||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtagggg-tgcagagacaaccaggaggtttgcctagaagcagc 375 Query: 564 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 623 ||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 376 cacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacg 435 Query: 624 gggctaagcgatctg 638 ||||||||||||||| Sbjct: 436 gggctaagcgatctg 450
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 323 bits (163), Expect = 4e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Minus Query: 16 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 75 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 114870 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 114812 Query: 76 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 134 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 114811 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 114754 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 114753 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 114694 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 114693 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 114634 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 114633 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 114574 Query: 315 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 373 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 114573 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 114514 Query: 374 ggcaaactctgaatacta 391 |||||||||||||||||| Sbjct: 114513 ggcaaactctgaatacta 114496 Score = 323 bits (163), Expect = 4e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Plus Query: 16 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 75 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 2647 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 2705 Query: 76 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 134 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 2706 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 2763 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 2764 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 2823 Query: 195 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 254 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 2824 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 2883 Query: 255 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 314 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 2884 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 2943 Query: 315 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 373 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2944 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 3003 Query: 374 ggcaaactctgaatacta 391 |||||||||||||||||| Sbjct: 3004 ggcaaactctgaatacta 3021 Score = 159 bits (80), Expect = 1e-35 Identities = 177/208 (85%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 |||||||||||||| ||| |||| |||||||||||| | ||| ||||| ||||| Sbjct: 114423 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggag-tgcttagacaaccagg 114365 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 ||||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| Sbjct: 114364 aggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgct 114305 Query: 605 cttgcgctgaagatgaacggggctaagc 632 | ||||| ||| ||||| ||| |||||| Sbjct: 114304 cctgcgccgaaaatgaatgggactaagc 114277 Score = 159 bits (80), Expect = 1e-35 Identities = 177/208 (85%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 |||||||||||||| ||| |||| |||||||||||| | ||| ||||| ||||| Sbjct: 3094 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggag-tgcttagacaaccagg 3152 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 ||||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| Sbjct: 3153 aggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgct 3212 Query: 605 cttgcgctgaagatgaacggggctaagc 632 | ||||| ||| ||||| ||| |||||| Sbjct: 3213 cctgcgccgaaaatgaatgggactaagc 3240
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 319 bits (161), Expect = 6e-84 Identities = 164/165 (99%) Strand = Plus / Plus Query: 12 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 523 Query: 72 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 131 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 524 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 583 Query: 132 gcttatggacccgaacctgggtgatctatccatgaccaggatgaa 176 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 gcttatggacccgaacctgggtgatctatccatgaccaggatgaa 628
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 317 bits (160), Expect = 2e-83 Identities = 322/371 (86%), Gaps = 5/371 (1%) Strand = Plus / Plus Query: 23 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 82 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| || | Sbjct: 2385 gcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaaggtaatg-- 2441 Query: 83 acccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggac 141 | || |||||| |||||||||||||| ||||||| ||| || |||||| |||| ||| Sbjct: 2442 atttactggagccatagcgaaagcgagttttaatagagcgtttagtcactatttatagac 2501 Query: 142 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 201 ||||||| |||||||||| ||||| ||||| |||||||| | | ||||||| |||| | Sbjct: 2502 ccgaacccgggtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcc 2561 Query: 202 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 261 |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| || Sbjct: 2562 cgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatc 2621 Query: 262 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggaca 320 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct: 2622 gaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataa 2681 Query: 321 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 380 | |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 2682 tttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaac 2741 Query: 381 tctgaatacta 391 ||||||||||| Sbjct: 2742 tctgaatacta 2752 Score = 141 bits (71), Expect = 3e-30 Identities = 165/195 (84%), Gaps = 1/195 (0%) Strand = Plus / Plus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | ||| |||| ||||||||||| | ||| ||||| ||||||||||||| |||| Sbjct: 2838 ataatagctaagtgggaaaggaggtggaag-tgcttagacaaccaggaggtttgcttaga 2896 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||| | |||||||||||||||||||||||||||| || ||||| ||||| ||| | Sbjct: 2897 agcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgcttctgcgccgaaaa 2956 Query: 618 tgaacggggctaagc 632 |||| ||| |||||| Sbjct: 2957 tgaatgggactaagc 2971
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 315 bits (159), Expect = 1e-82 Identities = 174/179 (97%) Strand = Plus / Plus Query: 80 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 139 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 140 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 199 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 200 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 258 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 315 bits (159), Expect = 1e-82 Identities = 329/382 (86%), Gaps = 9/382 (2%) Strand = Plus / Plus Query: 16 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 75 |||||||||||||||||||||||||||||||||||||| || | |||||||||||||||| Sbjct: 538 tctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggcttggttaagg 597 Query: 76 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga--ttgtcactgc 133 | ||| | ||| |||| ||||||||| ||||| |||||||| | | |||||| Sbjct: 598 g---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaatcgtcacttt 653 Query: 134 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 193 ||| ||||||||||| |||||||||| ||||| |||||||||||||||| | |||| ||| Sbjct: 654 ttagggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaag 713 Query: 194 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 253 ||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 714 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaa 773 Query: 254 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt-- 311 ||||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 774 tgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgg 833 Query: 312 -gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 370 ||| || |||||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 834 cgacgggctgtctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaat 893 Query: 371 cgaggcaaactctgaatactag 392 || ||||||| ||||||||| Sbjct: 894 cgtagcaaactaagaatactag 915 Score = 190 bits (96), Expect = 4e-45 Identities = 181/208 (87%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 ||||||||| |||| ||||| |||| ||||||||||| | |||| | |||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtgagaa-tgcagaaacagccagga 1051 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | Sbjct: 1052 ggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttc 1111 Query: 606 ttgcgctgaagatgaacggggctaagcg 633 |||||| ||| || ||||| ||||||| Sbjct: 1112 ttgcgccgaaaattcacgggactaagcg 1139
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 2e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 196 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 255 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 256 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 315 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 316 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 375 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 376 caaactctgaatactagatat 396 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 123 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 182 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 183 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 242 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 243 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 302 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 303 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 359 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 360 cggtaccaaatcgaggcaaactctgaatactaga 393 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 208 bits (105), Expect = 2e-50 Identities = 187/213 (87%), Gaps = 1/213 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 ||||||||| ||||||||||| |||| |||||| || | | ||| | ||| |||| | Sbjct: 1150 taaggccccaaaatgaccgctaagtggcaaaggatgt-gagaatgctgaaacaaccagaa 1208 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | Sbjct: 1209 ggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttc 1268 Query: 606 ttgcgctgaagatgaacggggctaagcgatctg 638 |||||| ||| ||||||||| ||||||| |||| Sbjct: 1269 ttgcgccgaaaatgaacgggactaagcggtctg 1301 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 75 ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| Sbjct: 693 tgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaagg 750
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 303 bits (153), Expect = 4e-79 Identities = 184/193 (95%), Gaps = 6/193 (3%) Strand = Plus / Plus Query: 446 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 505 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 506 tcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagcca 565 |||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 168012 tcagtgataaaggaggtggggg-tgcaaagac-----ggaggtttgcctaaaagcagcca 168065 Query: 566 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168066 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 168125 Query: 626 gctaagcgatctg 638 ||||||||||||| Sbjct: 168126 gctaagcgatctg 168138
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 303 bits (153), Expect = 4e-79 Identities = 184/193 (95%), Gaps = 6/193 (3%) Strand = Plus / Plus Query: 446 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 505 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 506 tcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagcca 565 |||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 2416 tcagtgataaaggaggtggggg-tgcaaagac-----ggaggtttgcctaaaagcagcca 2469 Query: 566 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2470 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 2529 Query: 626 gctaagcgatctg 638 ||||||||||||| Sbjct: 2530 gctaagcgatctg 2542
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 139 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 198 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 199 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 258 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 259 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 317 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 318 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 376 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 377 aaactctgaatactagatatgac 399 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 91.7 bits (46), Expect = 3e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 529 tgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagc 588 |||||| ||| |||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 6746 tgcaaatacaaccaggaggttggcttagaagcagccatcctttaaagagtgcgtaatagc 6805 Query: 589 tcactg 594 |||||| Sbjct: 6806 tcactg 6811 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 428 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 487 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 488 aggcccctaaatg 500 ||||||| ||||| Sbjct: 6706 aggccccaaaatg 6718 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 17 ctgaccgcgtgcctgttgaagaatgagccggcgact 52 |||||||| ||||||||||||||||||||||||||| Sbjct: 6234 ctgaccgcatgcctgttgaagaatgagccggcgact 6269 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 92 agccgtagcgaaagcgagtcttaatagggcgat 124 ||||||||| ||||||||||| ||||||||||| Sbjct: 6304 agccgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 139 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 198 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 199 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 258 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 259 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 317 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 318 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 376 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 377 aaactctgaatactagatatgac 399 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 91.7 bits (46), Expect = 3e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 529 tgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagc 588 |||||| ||| |||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 3809 tgcaaatacaaccaggaggttggcttagaagcagccatcctttaaagagtgcgtaatagc 3868 Query: 589 tcactg 594 |||||| Sbjct: 3869 tcactg 3874 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 428 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 487 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 488 aggcccctaaatg 500 ||||||| ||||| Sbjct: 3769 aggccccaaaatg 3781 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 17 ctgaccgcgtgcctgttgaagaatgagccggcgact 52 |||||||| ||||||||||||||||||||||||||| Sbjct: 3297 ctgaccgcatgcctgttgaagaatgagccggcgact 3332 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 92 agccgtagcgaaagcgagtcttaatagggcgat 124 ||||||||| ||||||||||| ||||||||||| Sbjct: 3367 agccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 139 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 198 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 199 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 258 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 259 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 317 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 318 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 376 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 377 aaactctgaatactagatatgac 399 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 91.7 bits (46), Expect = 3e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 529 tgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagc 588 |||||| ||| |||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 1097 tgcaaatacaaccaggaggttggcttagaagcagccatcctttaaagagtgcgtaatagc 1156 Query: 589 tcactg 594 |||||| Sbjct: 1157 tcactg 1162 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 428 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 487 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 488 aggcccctaaatg 500 ||||||| ||||| Sbjct: 1057 aggccccaaaatg 1069 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 17 ctgaccgcgtgcctgttgaagaatgagccggcgact 52 |||||||| ||||||||||||||||||||||||||| Sbjct: 585 ctgaccgcatgcctgttgaagaatgagccggcgact 620 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 92 agccgtagcgaaagcgagtcttaatagggcgat 124 ||||||||| ||||||||||| ||||||||||| Sbjct: 655 agccgtagcaaaagcgagtctgaatagggcgat 687
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 295 bits (149), Expect = 9e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 77 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 192429 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 192488 Query: 78 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 137 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 192489 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 192543 Query: 138 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 197 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 192544 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 192603 Query: 198 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 257 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 192604 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 192663 Query: 258 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 315 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 192664 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 192723 Query: 316 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 192724 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 192783 Query: 375 gcaaactctgaatacta 391 ||||||| |||||||| Sbjct: 192784 gcaaactaagaatacta 192800 Score = 295 bits (149), Expect = 9e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Minus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 77 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 144353 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 144294 Query: 78 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 137 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 144293 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 144239 Query: 138 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 197 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 144238 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 144179 Query: 198 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 257 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 144178 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 144119 Query: 258 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 315 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 144118 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 144059 Query: 316 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 144058 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 143999 Query: 375 gcaaactctgaatacta 391 ||||||| |||||||| Sbjct: 143998 gcaaactaagaatacta 143982 Score = 159 bits (80), Expect = 1e-35 Identities = 168/196 (85%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 ||| ||||| |||| ||||||||| | |||| ||||| |||| |||||||| |||| Sbjct: 192890 atggccgctaagtggcaaaggaggt-gaaaatgcagagacaaccagaaggtttgcttaga 192948 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| | Sbjct: 192949 agcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaa 193008 Query: 618 tgaacggggctaagcg 633 |||||||| ||||||| Sbjct: 193009 tgaacgggactaagcg 193024 Score = 159 bits (80), Expect = 1e-35 Identities = 168/196 (85%), Gaps = 1/196 (0%) Strand = Plus / Minus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 ||| ||||| |||| ||||||||| | |||| ||||| |||| |||||||| |||| Sbjct: 143892 atggccgctaagtggcaaaggaggt-gaaaatgcagagacaaccagaaggtttgcttaga 143834 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| | Sbjct: 143833 agcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaa 143774 Query: 618 tgaacggggctaagcg 633 |||||||| ||||||| Sbjct: 143773 tgaacgggactaagcg 143758
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 293 bits (148), Expect = 4e-76 Identities = 178/188 (94%), Gaps = 5/188 (2%) Strand = Plus / Minus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 124 Query: 75 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 134 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 123 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 69 Query: 135 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 194 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 68 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 9 Query: 195 agaggtcc 202 ||||||| Sbjct: 8 ggaggtcc 1
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 289 bits (146), Expect = 6e-75 Identities = 177/186 (95%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 453 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 512 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 513 taaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 572 |||||||||| || | |||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 115414 taaaggaggtaggag-tgcagagacagccaggaggtttgcctagaagcagccacccttga 115356 Query: 573 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 632 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 115355 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 115296 Query: 633 gatctg 638 |||||| Sbjct: 115295 gatctg 115290
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 289 bits (146), Expect = 6e-75 Identities = 263/302 (87%) Strand = Plus / Plus Query: 89 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 148 ||||||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| Sbjct: 2189 cggagccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacc 2248 Query: 149 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 208 || ||||||| |||| |||||||||||||| | | | ||| || ||||||||||||| Sbjct: 2249 cggatgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccg 2308 Query: 209 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 268 |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 2309 actgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccg 2368 Query: 269 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 328 ||||||||||||||||||||||||||||||||||||||| ||| | | | | |||| Sbjct: 2369 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttggggg 2428 Query: 329 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 388 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 2429 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaata 2488 Query: 389 ct 390 || Sbjct: 2489 ct 2490 Score = 196 bits (99), Expect = 6e-47 Identities = 181/207 (87%), Gaps = 1/207 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 |||||||||||||| | ||| ||||||||||||||| ||| |||| ||||| |||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggt-gggaatgcatagacaaccagga 2623 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2624 ggtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatc 2683 Query: 606 ttgcgctgaagatgaacggggctaagc 632 ||||| ||| ||||||||| |||||| Sbjct: 2684 ctgcgccgaaaatgaacgggactaagc 2710 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 16 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 ||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2121 tctgacctcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2170
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 126 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 185 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 186 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 245 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 246 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 305 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 306 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 362 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 363 taccaaatcgaggcaaactctgaatactaga 393 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 248 bits (125), Expect = 2e-62 Identities = 192/213 (90%), Gaps = 1/213 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 ||||||||||||||||||||| |||| |||||||||| | | ||| | ||| |||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggt-gagaatgctgaaacaaccagga 1084 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | Sbjct: 1085 ggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttc 1144 Query: 606 ttgcgctgaagatgaacggggctaagcgatctg 638 |||||| ||| ||||||||| ||||||| |||| Sbjct: 1145 ttgcgccgaaaatgaacgggactaagcggtctg 1177 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 17 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 73 |||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 571 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaa 627
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 285 bits (144), Expect = 9e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 88 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 145 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 146 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 205 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 740 Query: 206 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 265 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 741 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 800 Query: 266 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 324 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 801 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 860 Query: 325 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 384 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 861 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 920 Query: 385 aatactagata 395 ||||||||||| Sbjct: 921 aatactagata 931 Score = 196 bits (99), Expect = 6e-47 Identities = 166/187 (88%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| ||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaa-tgcagaaacaaccagg 1062 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 |||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| Sbjct: 1063 aggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgtt 1122 Query: 605 cttgcgc 611 ||||||| Sbjct: 1123 cttgcgc 1129 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 17 ctgaccgcgtgcctgttgaagaatgagccggcgact 52 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 285 bits (144), Expect = 9e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 88 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 145 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 146 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 205 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 25549 Query: 206 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 265 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 25550 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 25609 Query: 266 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 324 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 25610 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 25669 Query: 325 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 384 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 25670 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 25729 Query: 385 aatactagata 395 ||||||||||| Sbjct: 25730 aatactagata 25740 Score = 196 bits (99), Expect = 6e-47 Identities = 166/187 (88%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| ||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaa-tgcagaaacaaccagg 25871 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 |||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| Sbjct: 25872 aggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgtt 25931 Query: 605 cttgcgc 611 ||||||| Sbjct: 25932 cttgcgc 25938 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 17 ctgaccgcgtgcctgttgaagaatgagccggcgact 52 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 283 bits (143), Expect = 3e-73 Identities = 264/303 (87%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 88 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 147 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 148 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 207 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 208 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 267 ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaaccc 428 Query: 268 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag-g 326 ||||||||||||||||||||||||| ||| ||||||||| || | |||||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaacgattaaatctaggg 488 Query: 327 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 386 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| Sbjct: 489 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaa 548 Query: 387 tac 389 ||| Sbjct: 549 tac 551 Score = 182 bits (92), Expect = 9e-43 Identities = 181/208 (87%), Gaps = 2/208 (0%) Strand = Plus / Plus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 |||||| ||| ||||| ||| ||||||||||||||| ||| |||| ||||| ||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggt-gggattgcagagacaaccagg 684 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 ||||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| Sbjct: 685 aggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgat 744 Query: 605 cttgcgctgaagatgaacggggctaagc 632 | | ||| ||| |||||||||||||||| Sbjct: 745 cct-cgccgaaaatgaacggggctaagc 771 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 25 gtgcctgttgaagaatgagccggcgactcatagg 58 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 92 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 151 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 152 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 211 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 212 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 271 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 272 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 328 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 329 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 388 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 934 Query: 389 ctaga 393 ||||| Sbjct: 935 ctaga 939 Score = 190 bits (96), Expect = 4e-45 Identities = 181/208 (87%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 ||||||||||||||| ||||| |||| ||||||||| | | ||| | ||| |||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggt-gagaatgctgaaacaaccagga 1075 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||| ||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 1076 ggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttc 1135 Query: 606 ttgcgctgaagatgaacggggctaagcg 633 |||||| ||| |||| |||| ||||||| Sbjct: 1136 ttgcgccgaaaatgatcgggactaagcg 1163 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 10 aggatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 69 |||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 555 aggacctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttgg 614 Query: 70 ttaa 73 |||| Sbjct: 615 ttaa 618
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 3e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 98 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 156 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 157 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 216 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 217 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 276 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 277 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 333 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 334 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 390 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 161 bits (81), Expect = 3e-36 Identities = 148/169 (87%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 |||||||||||||| | || |||| ||||||||| | | ||| ||||| |||| | Sbjct: 995 taaggcccctaaataatttctaagtgggaaaggaggt-gagaatgctgagacaaccagaa 1053 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 ggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1102 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 58 ||||||||| ||||||||||||||| ||||||||| ||||| Sbjct: 543 tgaccgcgttcctgttgaagaatgaaccggcgacttatagg 583
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 92 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 151 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 152 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 211 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 212 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 271 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 272 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 328 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 329 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 388 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 2816 Query: 389 ctaga 393 ||||| Sbjct: 2817 ctaga 2821 Score = 190 bits (96), Expect = 4e-45 Identities = 181/208 (87%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 ||||||||||||||| ||||| |||| ||||||||| | | ||| | ||| |||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggt-gagaatgctgaaacaaccagga 2957 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||| ||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 2958 ggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttc 3017 Query: 606 ttgcgctgaagatgaacggggctaagcg 633 |||||| ||| |||| |||| ||||||| Sbjct: 3018 ttgcgccgaaaatgatcgggactaagcg 3045 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 15 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 73 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2442 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 2500
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 101 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 160 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 161 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 220 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 221 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 280 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 281 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 339 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 340 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 101 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 160 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 161 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 220 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 221 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 280 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 281 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 339 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 340 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 178 bits (90), Expect = 1e-41 Identities = 178/206 (86%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 |||||||||||||| | ||| |||| ||||||||| ||| |||| ||||| |||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggt-gggaatgcatagacaaccagga 189990 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 189991 ggtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatc 190050 Query: 606 ttgcgctgaagatgaacggggctaag 631 ||||| ||| ||||||||| ||||| Sbjct: 190051 ctgcgccgaaaatgaacgggactaag 190076 Score = 178 bits (90), Expect = 1e-41 Identities = 178/206 (86%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 |||||||||||||| | ||| |||| ||||||||| ||| |||| ||||| |||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggt-gggaatgcatagacaaccagga 151417 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 151418 ggtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatc 151477 Query: 606 ttgcgctgaagatgaacggggctaag 631 ||||| ||| ||||||||| ||||| Sbjct: 151478 ctgcgccgaaaatgaacgggactaag 151503 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 24 cgtgcctgttgaagaatgagccggcgactcatag 57 ||||| ||||||||||||||||||||||| |||| Sbjct: 189494 cgtgcatgttgaagaatgagccggcgacttatag 189527 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 24 cgtgcctgttgaagaatgagccggcgactcatag 57 ||||| ||||||||||||||||||||||| |||| Sbjct: 150921 cgtgcatgttgaagaatgagccggcgacttatag 150954
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 280 bits (141), Expect = 5e-72 Identities = 321/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 77 ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 598 tgaccgcatgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggca 657 Query: 78 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 137 | || || |||||| ||||||||| ||||| ||||||||| |||||||| |||| Sbjct: 658 aa--aagcc---ggagccaaagcgaaagcaagtctgaatagggcgcttgtcactttttat 712 Query: 138 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 197 ||||||||||||| |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 713 ggacccgaacctgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 772 Query: 198 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 257 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 773 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 832 Query: 258 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 315 | |||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 833 agtcgaactcagagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 892 Query: 316 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 374 || | | ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 893 gggctagttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 952 Query: 375 gcaaactctgaatacta 391 ||||||| |||||||| Sbjct: 953 gcaaactaagaatacta 969 Score = 174 bits (88), Expect = 2e-40 Identities = 170/196 (86%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 ||| ||||| |||| |||||||||| |||||||||| |||| |||||||| |||| Sbjct: 1059 atggccgctaagtggcaaaggaggtgaaaa-tgcaaagacaaccagaaggtttgcttaga 1117 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 ||||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||| | Sbjct: 1118 agcagccacccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaa 1177 Query: 618 tgaacggggctaagcg 633 |||||||| ||||||| Sbjct: 1178 tgaacgggactaagcg 1193
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 278 bits (140), Expect = 2e-71 Identities = 315/369 (85%), Gaps = 7/369 (1%) Strand = Plus / Plus Query: 25 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 84 |||| ||||||||||||||||||||||| ||| | |||||| |||||||| || | | Sbjct: 188572 gtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggtaaagaat- 188629 Query: 85 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 144 |||| |||| || ||||||||| | ||||| ||| | |||||| |||| |||||| Sbjct: 188630 --accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttatagacccg 188687 Query: 145 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 204 |||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||||||||| Sbjct: 188688 aacccggatgatctagccatggccagggtgaagcttaggtaacactaagtggaggtccga 188747 Query: 205 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 264 ||||||| |||||||| ||| |||||||||||||||| |||||||||||||||| ||||| Sbjct: 188748 accgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgccaatcgaa 188807 Query: 265 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggacatc 322 || ||||||||||||||||||||||||| ||||||||||||| ||||| || | | Sbjct: 188808 tccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct-taaact 188866 Query: 323 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 382 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 188867 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 188926 Query: 383 tgaatacta 391 ||||||||| Sbjct: 188927 tgaatacta 188935 Score = 276 bits (139), Expect = 8e-71 Identities = 320/376 (85%), Gaps = 7/376 (1%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 77 ||||| ||||| ||||||||||||||||||||||| ||| | |||||| |||||||| | Sbjct: 150122 tgacctcgtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggta 150180 Query: 78 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 137 | | | |||| |||| || ||||||||| | ||||| ||| | |||||| |||| Sbjct: 150181 aagaat---accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttat 150237 Query: 138 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 197 |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| || Sbjct: 150238 agacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaagtgga 150297 Query: 198 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 257 ||||||| |||||| |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 150298 ggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgcc 150357 Query: 258 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 315 | ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| || Sbjct: 150358 aatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct 150417 Query: 316 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 375 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 150418 -taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagg 150476 Query: 376 caaactctgaatacta 391 |||||||||||||||| Sbjct: 150477 caaactctgaatacta 150492 Score = 151 bits (76), Expect = 3e-33 Identities = 173/204 (84%), Gaps = 1/204 (0%) Strand = Plus / Plus Query: 428 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 487 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 488 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 547 ||||||| |||| | || |||| |||||||||||| |||| ||||| |||||||| Sbjct: 189011 aggccccaaaataattactaagtggcaaaggaggtgggaa-tgcatagacaaccaggagg 189069 Query: 548 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 607 ||||| |||||||||| | |||||||||||||||||||||||||||| || || | | | Sbjct: 189070 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcct 189129 Query: 608 gcgctgaagatgaacggggctaag 631 |||| ||| ||||||||| ||||| Sbjct: 189130 gcgccgaaaatgaacgggactaag 189153 Score = 151 bits (76), Expect = 3e-33 Identities = 173/204 (84%), Gaps = 1/204 (0%) Strand = Plus / Plus Query: 428 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 487 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 488 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 547 ||||||| |||| | || |||| |||||||||||| |||| ||||| |||||||| Sbjct: 150568 aggccccaaaataattactaagtggcaaaggaggtgggaa-tgcatagacaaccaggagg 150626 Query: 548 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 607 ||||| |||||||||| | |||||||||||||||||||||||||||| || || | | | Sbjct: 150627 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcct 150686 Query: 608 gcgctgaagatgaacggggctaag 631 |||| ||| ||||||||| ||||| Sbjct: 150687 gcgccgaaaatgaacgggactaag 150710
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Minus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 5974 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 5915 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 5914 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 5855 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 5854 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 5795 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 5794 agctagctggttctccccgaaatacgttgaggcg 5761 Score = 155 bits (78), Expect = 2e-34 Identities = 166/194 (85%), Gaps = 1/194 (0%) Strand = Plus / Minus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 5586 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | | || |||||||||||||||||| ||| ||||| |||||||||||||||||| Sbjct: 5585 atcaacactaagtgataaaggaggtgggat-tgcccagacaaccaggaggtttgcctaga 5527 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| | Sbjct: 5526 agcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaa 5467 Query: 618 tgaacggggctaag 631 |||||||||||||| Sbjct: 5466 tgaacggggctaag 5453 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 6041 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 5994 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 211798 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 211857 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 211858 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 211917 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 211918 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 211977 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 211978 agctagctggttctccccgaaatacgttgaggcg 212011 Score = 155 bits (78), Expect = 2e-34 Identities = 166/194 (85%), Gaps = 1/194 (0%) Strand = Plus / Plus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 212186 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | | || |||||||||||||||||| ||| ||||| |||||||||||||||||| Sbjct: 212187 atcaacactaagtgataaaggaggtgggat-tgcccagacaaccaggaggtttgcctaga 212245 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| | Sbjct: 212246 agcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaa 212305 Query: 618 tgaacggggctaag 631 |||||||||||||| Sbjct: 212306 tgaacggggctaag 212319 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 211731 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 211778 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 134 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 193 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 194 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 253 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 254 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 313 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 314 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 370 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 371 cgaggcaaactctgaatact 390 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 192 bits (97), Expect = 1e-45 Identities = 152/169 (89%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 |||||||||||||| || ||| |||| ||||||||| | ||| ||||| |||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggt-gaaaatgctcagacaaccagga 1083 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1084 ggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 17 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 570 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 618
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 134 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 193 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 194 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 253 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 254 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 313 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 314 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 370 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 371 cgaggcaaactctgaatact 390 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 192 bits (97), Expect = 1e-45 Identities = 152/169 (89%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 |||||||||||||| || ||| |||| ||||||||| | ||| ||||| |||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggt-gaaaatgctcagacaaccagga 2821 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2822 ggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 17 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 2308 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 2356
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 270 bits (136), Expect = 5e-69 Identities = 251/286 (87%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 77 |||||| |||||||||||||||||||||||||||| ||||| | |||| ||||||||| Sbjct: 2776 tgaccgtgtgcctgttgaagaatgagccggcgacttataggtactggca-ggttaaggg- 2833 Query: 78 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 137 |||| | |||||||| ||||||||||||||| ||||||||||| |||| | |||| Sbjct: 2834 --ggaaatc-ccggagccacagcgaaagcgagtctgaatagggcgatggtcagtatttat 2890 Query: 138 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 197 |||||||||| |||||||||| ||||| |||||||||||||||| ||| || | | || Sbjct: 2891 agacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgataccacgtgga 2950 Query: 198 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 257 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2951 ggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcc 3010 Query: 258 actcgaacccagagctagctggttctccccgaaatgcgttgaggcg 303 | |||||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 3011 aatcgaacccggagctagctggttctccccgaaatacgtttaggcg 3056 Score = 174 bits (88), Expect = 2e-40 Identities = 170/196 (86%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | |||| |||||||||||||||||| ||| ||||| |||||||||||||||||| Sbjct: 3232 ataagcgctaagtgataaaggaggtgggat-tgcccagacaaccaggaggtttgcctaga 3290 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| | Sbjct: 3291 agcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaa 3350 Query: 618 tgaacggggctaagcg 633 |||||||||||||||| Sbjct: 3351 tgaacggggctaagcg 3366 Score = 91.7 bits (46), Expect = 3e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 325 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 383 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 384 gaatac 389 |||||| Sbjct: 3139 gaatac 3144
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 88 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 142 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 143 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 202 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 203 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 262 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 263 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 319 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 320 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 378 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 379 actctgaatactagata 395 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 17 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 75 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 460 agagggaaacagcccggatcaccagctaaggcccctaaatg 500 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 554 tagaagcagccaccctttaaagagtgcgtaatagctcactg 594 |||||||||| | |||| ||||||||||||||||||||||| Sbjct: 1848 tagaagcagcaagccttaaaagagtgcgtaatagctcactg 1888
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 88 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 142 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 143 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 202 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 203 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 262 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 263 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 319 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 320 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 378 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 379 actctgaatactagata 395 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 17 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 75 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 460 agagggaaacagcccggatcaccagctaaggcccctaaatg 500 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 8e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 101 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 160 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 161 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 220 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 221 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 280 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 281 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 337 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 338 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 196 bits (99), Expect = 6e-47 Identities = 185/211 (87%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 |||||| ||| |||| | |||| ||||||||||||||| | | ||||| ||||| | ||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggt-gagagtgcacagacaactagg 684 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 |||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| Sbjct: 685 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgct 744 Query: 605 cttgcgctgaagatgaacggggctaagcgat 635 | | ||| ||| ||||||||||||||||||| Sbjct: 745 cct-cgccgaaaatgaacggggctaagcgat 774 Score = 81.8 bits (41), Expect = 3e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 16 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 60 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 266 bits (134), Expect = 8e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 88 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 147 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 137118 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 137177 Query: 148 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 207 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 137178 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 137237 Query: 208 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 267 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 137238 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 137297 Query: 268 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 324 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 137298 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 137357 Query: 325 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 384 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 137358 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 137417 Query: 385 aatactag 392 |||||||| Sbjct: 137418 aatactag 137425 Score = 266 bits (134), Expect = 8e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Minus Query: 88 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 147 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 48426 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 48367 Query: 148 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 207 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 48366 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 48307 Query: 208 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 267 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 48306 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 48247 Query: 268 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 324 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 48246 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 48187 Query: 325 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 384 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 48186 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 48127 Query: 385 aatactag 392 |||||||| Sbjct: 48126 aatactag 48119 Score = 196 bits (99), Expect = 6e-47 Identities = 181/207 (87%), Gaps = 1/207 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 ||||||||||||||| | ||| |||| |||||| || | | |||| ||||| |||| | Sbjct: 137502 taaggcccctaaatggcagctaagtggcaaaggatgt-gagaatgcagagacaaccagaa 137560 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| | Sbjct: 137561 ggtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttc 137620 Query: 606 ttgcgctgaagatgaacggggctaagc 632 |||||| ||| ||||||||| |||||| Sbjct: 137621 ttgcgccgaaaatgaacgggactaagc 137647 Score = 196 bits (99), Expect = 6e-47 Identities = 181/207 (87%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 ||||||||||||||| | ||| |||| |||||| || | | |||| ||||| |||| | Sbjct: 48042 taaggcccctaaatggcagctaagtggcaaaggatgt-gagaatgcagagacaaccagaa 47984 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| | Sbjct: 47983 ggtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttc 47924 Query: 606 ttgcgctgaagatgaacggggctaagc 632 |||||| ||| ||||||||| |||||| Sbjct: 47923 ttgcgccgaaaatgaacgggactaagc 47897 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 75 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 137110 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 75 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 48434
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 266 bits (134), Expect = 8e-68 Identities = 267/310 (86%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 87 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 146 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 147 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 206 || |||||||||| ||||| |||||| ||||||||| |||||| | || |||||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaac 743 Query: 207 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 266 |||| || |||||||| || |||||||||||||||||||||||||||| ||| |||||| Sbjct: 744 cgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaact 803 Query: 267 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca- 320 | ||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 804 cggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcag 863 Query: 321 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 380 ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 864 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaac 923 Query: 381 tctgaatact 390 | ||||||| Sbjct: 924 taagaatact 933 Score = 238 bits (120), Expect = 2e-59 Identities = 190/212 (89%), Gaps = 1/212 (0%) Strand = Plus / Plus Query: 422 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 481 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 482 cagctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagcc 541 ||||||||||||| |||| |||||||||||||||||| ||| | | ||| ||||| || Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaaggatgtgagag-tgcccagacaacc 1066 Query: 542 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 601 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| Sbjct: 1067 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagc 1126 Query: 602 gcccttgcgctgaagatgaacggggctaagcg 633 || ||||||| ||| ||||||||| ||||||| Sbjct: 1127 gctcttgcgccgaaaatgaacgggactaagcg 1158 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 17 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 75 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 559 ctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttggttaagg 617
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 266 bits (134), Expect = 8e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||||||||||||| |||||| || |||| |||||||||| Sbjct: 356101 ggagccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccc 356160 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 ||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 356161 tggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 356220 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 356221 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccagg 356280 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 356281 agctagctggttctccccgaaatacgttgaggcg 356314 Score = 123 bits (62), Expect = 8e-25 Identities = 162/194 (83%), Gaps = 1/194 (0%) Strand = Plus / Plus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| || |||| ||||||||||||| || | |||||||||| ||| || Sbjct: 356430 tgggggataagctccacactcgaaagggaaacagcccagaccgccagctaaggtcccaaa 356489 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | || |||||||||||||||||| ||| ||||| ||||||||||||| |||| Sbjct: 356490 atcagtactaagtgataaaggaggtgggat-tgcttagacaaccaggaggtttgcttaga 356548 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| | Sbjct: 356549 agcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaa 356608 Query: 618 tgaacggggctaag 631 |||||||||||||| Sbjct: 356609 tgaacggggctaag 356622 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 356034 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 356081 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcga 373 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 262 bits (132), Expect = 1e-66 Identities = 323/379 (85%), Gaps = 7/379 (1%) Strand = Plus / Plus Query: 16 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 75 ||||||| ||||| ||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 2321 tctgacctcgtgcatgttgaagaatgagccggcgacttgtatgcagtggca-ggttaagg 2379 Query: 76 -gaacggaacccaccggagccgtagcgaaagcgagtcttaatagg-gcgattgtcactgc 133 | | ||| ||||||||| ||| ||||||||| ||| ||| | ||| | ||||||| Sbjct: 2380 cgtaaagaat--accggagccatagtgaaagcgag-cttgataagagcgttcgtcactgt 2436 Query: 134 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 193 ||| |||||||||| || ||||||| |||| ||||| |||||||| | | | |||||| Sbjct: 2437 ttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggtaacactaag 2496 Query: 194 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 253 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 2497 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaaa 2556 Query: 254 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 313 ||||| ||||| || ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 2557 tgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcggttga 2616 Query: 314 ctggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 372 | | | ||||||||||||||||||||||| ||||||| | ||||||||||||||| Sbjct: 2617 tgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggtaccaaatcg 2676 Query: 373 aggcaaactctgaatacta 391 ||||||||||||||||||| Sbjct: 2677 aggcaaactctgaatacta 2695 Score = 145 bits (73), Expect = 2e-31 Identities = 146/169 (86%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 |||||||||||||| || |||| |||||| ||||| |||| ||||| |||||| Sbjct: 2769 taaggcccctaaatatttactaagtggcaaaggaagtgggaa-tgcatagacaaccagga 2827 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 ||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 2828 ggtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactg 2876
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2138158 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 2138099 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2138098 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2138039 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2138038 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 2137979 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 2137978 agctagctggttctccccgaaatacgttgaggcg 2137945 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 476702 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 476761 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 476762 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 476821 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 476822 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 476881 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 476882 agctagctggttctccccgaaatacgttgaggcg 476915 Score = 170 bits (86), Expect = 4e-39 Identities = 168/194 (86%), Gaps = 1/194 (0%) Strand = Plus / Minus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | | || |||||||||||||||||| |||| ||||| |||||||||||||||||| Sbjct: 2137769 atcaacactaagtgataaaggaggtgggat-tgcatagacaaccaggaggtttgcctaga 2137711 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| | Sbjct: 2137710 agcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaa 2137651 Query: 618 tgaacggggctaag 631 |||||||||||||| Sbjct: 2137650 tgaacggggctaag 2137637 Score = 170 bits (86), Expect = 4e-39 Identities = 168/194 (86%), Gaps = 1/194 (0%) Strand = Plus / Plus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | | || |||||||||||||||||| |||| ||||| |||||||||||||||||| Sbjct: 477091 atcaacactaagtgataaaggaggtgggat-tgcatagacaaccaggaggtttgcctaga 477149 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| | Sbjct: 477150 agcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaa 477209 Query: 618 tgaacggggctaag 631 |||||||||||||| Sbjct: 477210 tgaacggggctaag 477223 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2138225 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2138178 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 476635 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 476682 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 2e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 101 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 160 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 161 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 220 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 221 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 280 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 281 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 337 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 338 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 198 bits (100), Expect = 2e-47 Identities = 179/204 (87%), Gaps = 1/204 (0%) Strand = Plus / Plus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 |||||| ||| |||| | |||| | |||||||||||||||| | |||| ||||| | ||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggag-tgcatagacaactagg 684 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 |||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| Sbjct: 685 aggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgct 744 Query: 605 cttgcgctgaagatgaacggggct 628 | ||||| ||| |||||||||||| Sbjct: 745 cctgcgccgaatatgaacggggct 768 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 60 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 258 bits (130), Expect = 2e-65 Identities = 253/292 (86%), Gaps = 4/292 (1%) Strand = Plus / Plus Query: 16 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 75 |||||| |||||||||||||||||||||||||||||| ||| | |||||| |||||||| Sbjct: 2303 tctgactgcgtgcctgttgaagaatgagccggcgacttataagtagtggca-ggttaagg 2361 Query: 76 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 135 | | | ||||||||| ||| ||||||||| || ||||||||| ||||||||| || Sbjct: 2362 tagagaat---accggagccatagtgaaagcgagcctgaatagggcgtttgtcactggtt 2418 Query: 136 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 195 || |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| Sbjct: 2419 atagacccgaacccggatgatctaaccatggccaggttgaagcttaggtaatactaagtg 2478 Query: 196 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 255 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2479 gaggaccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 2538 Query: 256 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 307 ||| ||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2539 ccaatcgaattcggagctagctggttctccccgaaatgcgtttaggcgcagc 2590 Score = 178 bits (90), Expect = 1e-41 Identities = 154/174 (88%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 427 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 486 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 487 aaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggag 546 ||||||||||||| | ||| ||||||||||||||| ||| ||||| ||||| |||||| Sbjct: 2751 aaggcccctaaataattgctaagtgataaaggaggt-gggagtgcatagacaatcaggag 2809 Query: 547 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 600 |||||| |||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 2810 gtttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactgatcgag 2863
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 339409 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 339350 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 339349 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 339290 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 339289 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 339230 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 339229 agctagctggttctccccgaaatacgttgaggcg 339196 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 132469 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 132410 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 132409 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 132350 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 132349 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 132290 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 132289 agctagctggttctccccgaaatacgttgaggcg 132256 Score = 147 bits (74), Expect = 5e-32 Identities = 165/194 (85%), Gaps = 1/194 (0%) Strand = Plus / Minus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 339021 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | | || |||||||||||||||||| | || ||||| |||||||||||||||||| Sbjct: 339020 atcaacactaagtgataaaggaggtgggat-tccatagacaaccaggaggtttgcctaga 338962 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| ||| || |||||||||||||||||||| ||||| | | ||||| ||| | Sbjct: 338961 agcagccatcctcaaaggagtgcgtaatagctcactggtcgagggatcctgcgccgaaaa 338902 Query: 618 tgaacggggctaag 631 |||||||||||||| Sbjct: 338901 tgaacggggctaag 338888 Score = 147 bits (74), Expect = 5e-32 Identities = 165/194 (85%), Gaps = 1/194 (0%) Strand = Plus / Minus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 132081 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | | || |||||||||||||||||| | || ||||| |||||||||||||||||| Sbjct: 132080 atcaacactaagtgataaaggaggtgggat-tccatagacaaccaggaggtttgcctaga 132022 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| ||| || |||||||||||||||||||| ||||| | | ||||| ||| | Sbjct: 132021 agcagccatcctcaaaggagtgcgtaatagctcactggtcgagggatcctgcgccgaaaa 131962 Query: 618 tgaacggggctaag 631 |||||||||||||| Sbjct: 131961 tgaacggggctaag 131948 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 339476 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 339429 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 132536 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 132489 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 258 bits (130), Expect = 2e-65 Identities = 271/312 (86%), Gaps = 7/312 (2%) Strand = Plus / Plus Query: 92 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 149 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 | ||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | | Sbjct: 776 ccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcgg 835 Query: 270 agctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctagg 326 |||||||||| ||||||||||||||||||||||||||| || || || || |||| || Sbjct: 836 agctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttgg 894 Query: 327 ggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 385 |||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| || Sbjct: 895 ggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcaga 954 Query: 386 atactagatatg 397 |||| ||||||| Sbjct: 955 atacaagatatg 966 Score = 153 bits (77), Expect = 8e-34 Identities = 147/169 (86%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 ||||||||||||||| | || |||| |||||| || | | ||| | ||| |||||| Sbjct: 1038 taaggcccctaaatggtcactaagtggaaaaggatgt-gagaatgctgaaacaaccagga 1096 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 ||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1097 ggtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactg 1145 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 76 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Minus Query: 28 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 87 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 39855 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 39800 Query: 88 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 146 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 39799 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 39740 Query: 147 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 206 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 39739 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 39680 Query: 207 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 266 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 39679 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 39620 Query: 267 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 325 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 39619 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 39560 Query: 326 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 385 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 39559 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 39500 Query: 386 atacta 391 |||||| Sbjct: 39499 atacta 39494 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 28 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 87 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 19545 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 19600 Query: 88 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 146 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 19601 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 19660 Query: 147 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 206 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 19661 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 19720 Query: 207 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 266 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 19721 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 19780 Query: 267 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 325 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 19781 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 19840 Query: 326 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 385 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 19841 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 19900 Query: 386 atacta 391 |||||| Sbjct: 19901 atacta 19906 Score = 141 bits (71), Expect = 3e-30 Identities = 156/183 (85%), Gaps = 1/183 (0%) Strand = Plus / Minus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | ||| |||||||||||| ||||| ||| ||||| ||||||||| ||||||| Sbjct: 39408 ataattgctaagtgataaaggatgtgggaa-tgctgagacaatcaggaggttcgcctaga 39350 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||| | ||||||||||||||||||||||||||||||| ||||| | ||||| ||| | Sbjct: 39349 agcagctatcctttaaagagtgcgtaatagctcactgatcaagcgcacctgcgccgaaaa 39290 Query: 618 tga 620 ||| Sbjct: 39289 tga 39287 Score = 141 bits (71), Expect = 3e-30 Identities = 156/183 (85%), Gaps = 1/183 (0%) Strand = Plus / Plus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | ||| |||||||||||| ||||| ||| ||||| ||||||||| ||||||| Sbjct: 19992 ataattgctaagtgataaaggatgtgggaa-tgctgagacaatcaggaggttcgcctaga 20050 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||| | ||||||||||||||||||||||||||||||| ||||| | ||||| ||| | Sbjct: 20051 agcagctatcctttaaagagtgcgtaatagctcactgatcaagcgcacctgcgccgaaaa 20110 Query: 618 tga 620 ||| Sbjct: 20111 tga 20113
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 252 bits (127), Expect = 1e-63 Identities = 272/317 (85%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 88 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 142 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 143 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 202 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 935 Query: 203 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 262 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 936 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 995 Query: 263 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 319 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 996 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1054 Query: 320 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 378 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1055 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1114 Query: 379 actctgaatactagata 395 |||| |||||||||||| Sbjct: 1115 actcagaatactagata 1131 Score = 117 bits (59), Expect = 5e-23 Identities = 117/135 (86%), Gaps = 1/135 (0%) Strand = Plus / Plus Query: 460 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 519 ||||||||||||||| ||||||||||||||||||||||||| | || |||| |||||| Sbjct: 1180 agagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaagga 1239 Query: 520 ggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtg 579 ||| | ||| | ||| ||||||||||||| ||||||||||||||||| |||||||| Sbjct: 1240 tgtgagaa-tgctgaaacaaccaggaggtttgcttagaagcagccacccttgaaagagtg 1298 Query: 580 cgtaatagctcactg 594 ||||||||||||||| Sbjct: 1299 cgtaatagctcactg 1313 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 75 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 750 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaaggttaagg 807
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 5e-63 Identities = 310/368 (84%), Gaps = 5/368 (1%) Strand = Plus / Plus Query: 23 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 82 |||||||||||||||||||||||||||||| ||||||| |||| ||||||||| | | Sbjct: 188 gcgtgcctgttgaagaatgagccggcgacttataggcactggca-ggttaaggggaataa 246 Query: 83 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 142 |||| | |||| || |||| ||||||| ||||||||| | |||| || |||| |||| Sbjct: 247 accc---gaagccaaagggaaaccgagtctgaatagggcgttagtcagtgtttatagacc 303 Query: 143 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 202 |||||| |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||| Sbjct: 304 cgaacccgggtgatctaaccatgtccaggatgaagcttgggtgacaccaagtggaggtcc 363 Query: 203 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 262 |||||||| |||||| | ||||||||| |||||||||||||||||||||| ||| Sbjct: 364 gaaccgaccaccgttgaaaaggtggcggatgaggtgtggttaggggtgaaatgccaatcg 423 Query: 263 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 322 ||||| ||||||||||||||||| ||||||| |||||||| |||| |||| ||| | Sbjct: 424 aacccggagctagctggttctcctcgaaatgtgttgaggcacagcggttgtgattacagc 483 Query: 323 t-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 381 | |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| Sbjct: 484 tggggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaact 543 Query: 382 ctgaatac 389 | |||||| Sbjct: 544 cagaatac 551 Score = 186 bits (94), Expect = 6e-44 Identities = 152/170 (89%), Gaps = 1/170 (0%) Strand = Plus / Plus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 |||||| ||||||||| ||| |||| |||||||||| ||| |||| ||||| ||||| Sbjct: 626 ctaaggtccctaaatggatgctaagtggtaaaggaggt-gggattgcagagacaaccagg 684 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 ||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 685 aggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactg 734
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 5e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 98 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 157 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 158 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 217 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 218 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 277 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 278 ggttctccccgaaatgcgttgaggcgcagc 307 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 210 bits (106), Expect = 4e-51 Identities = 183/206 (88%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 ||||| ||| |||| ||| || ||||| ||||||||| ||| ||||| ||||| |||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggt-gggagtgcacagacaaccagga 686 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 687 ggtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctc 746 Query: 606 ttgcgctgaagatgaacggggctaag 631 | ||| ||| ||||||||||||||| Sbjct: 747 ct-cgccgaaaatgaacggggctaag 771 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 325 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 384 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 385 aatac 389 ||||| Sbjct: 548 aatac 552 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 16 tctgaccgcgtgcctgttgaagaatgagccggcga 50 |||||||||||||||||||||| |||||||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagcatgagccggcga 216
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 5e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 98 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 157 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 158 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 217 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 218 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 277 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 278 ggttctccccgaaatgcgttgaggcgcagc 307 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 222 bits (112), Expect = 1e-54 Identities = 186/208 (89%), Gaps = 2/208 (0%) Strand = Plus / Plus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 |||||| ||| ||||||| ||| ||||||||||||||| | | ||||| |||| ||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggt-gagagtgcactgacaaccagg 685 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 686 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgct 745 Query: 605 cttgcgctgaagatgaacggggctaagc 632 ||| ||| ||| |||||||||||||||| Sbjct: 746 ctt-cgccgaaaatgaacggggctaagc 772 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 325 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 384 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 385 aatac 389 ||||| Sbjct: 548 aatac 552 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| ||||||||||||| |||||||||||| | |||||||||||| Sbjct: 184 tgaccgtgtgcctgttgaagcatgagccggcgagttataggcagtggc 231
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 250 bits (126), Expect = 5e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 88 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 146 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 147 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 206 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 207 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 266 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 267 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 324 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 325 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 383 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 384 gaatactagatatg 397 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 145 bits (73), Expect = 2e-31 Identities = 146/169 (86%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 ||||||||||||||| | || |||| ||||||| || | | ||| | ||| |||||| Sbjct: 1033 taaggcccctaaatggtcactaagtggtaaaggatgt-gagaatgctgaaacaaccagga 1091 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 ||| || |||||||||| ||| || ||||||||||||||||||||||| Sbjct: 1092 agttcgcttagaagcagctacctttcaaagagtgcgtaatagctcactg 1140 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 66 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 5e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 58 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 5e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 58 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 5e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 58 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 5e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 196 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 255 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 256 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 315 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 316 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 372 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 373 aggcaaactctgaatactag 392 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 161 bits (81), Expect = 3e-36 Identities = 170/197 (86%), Gaps = 2/197 (1%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 484 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 ||||||||||| ||||| || ||||| ||||| ||| | | |||| ||||| |||| Sbjct: 1013 ctaaggcccctcaatgattcctaagtgacgaaggatgtgagag-tgcagagacaaccaga 1071 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 1072 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgct 1131 Query: 605 cttgcgctgaagatgaa 621 || |||| ||| ||||| Sbjct: 1132 ctggcgccgaaaatgaa 1148 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 19 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 75 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 125 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 180 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 250 bits (126), Expect = 5e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 88 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 146 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 147 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 206 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 207 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 266 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 267 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 324 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 325 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 383 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 384 gaatactagatatg 397 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 145 bits (73), Expect = 2e-31 Identities = 146/169 (86%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 ||||||||||||||| | || |||| ||||||| || | | ||| | ||| |||||| Sbjct: 1033 taaggcccctaaatggtcactaagtggtaaaggatgt-gagaatgctgaaacaaccagga 1091 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 ||| || |||||||||| ||| || ||||||||||||||||||||||| Sbjct: 1092 agttcgcttagaagcagctacctttcaaagagtgcgtaatagctcactg 1140 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 66 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 248 bits (125), Expect = 2e-62 Identities = 197/221 (89%) Strand = Plus / Plus Query: 87 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 146 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 147 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 206 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 207 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 266 |||| ||||||||| |||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 742 cgaccgatgttgaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaact 801 Query: 267 cagagctagctggttctccccgaaatgcgttgaggcgcagc 307 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 802 cggagctagctggttctccccgaaatgcgttgaggcgcagc 842 Score = 234 bits (118), Expect = 3e-58 Identities = 191/214 (89%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 |||||||||| ||||||||||| |||| ||||||||| | | |||||||||| ||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagag-tgcaaagacaaccagg 1062 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 1063 aggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgct 1122 Query: 605 cttgcgctgaagatgaacggggctaagcgatctg 638 || |||| ||| | ||||||| ||||||| |||| Sbjct: 1123 ctcgcgccgaaaacgaacgggactaagcggtctg 1156 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 16 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 75 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 320 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 379 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 380 ctctgaatactagata 395 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 246 bits (124), Expect = 8e-62 Identities = 273/317 (86%), Gaps = 8/317 (2%) Strand = Plus / Plus Query: 88 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 144 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 145 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 204 |||| ||||||||||| ||||||||||||||||||||| | | || ||| ||||||||| Sbjct: 704 aacccgggtgatctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccga 763 Query: 205 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 264 |||||| ||||||||| |||| |||||||||||||| |||||| ||||| ||| ||||| Sbjct: 764 accgaccgatgttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaa 823 Query: 265 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-at 321 | | ||||||||||| ||||||||||||||||||||||||||| || || || || || Sbjct: 824 ctcggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactat 882 Query: 322 ctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 380 || |||||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||| Sbjct: 883 cttggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaac 942 Query: 381 tctgaatactagatatg 397 || |||||| ||||||| Sbjct: 943 tcagaatacaagatatg 959 Score = 137 bits (69), Expect = 5e-29 Identities = 130/149 (87%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 446 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 505 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| | | Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatggtcac 2766 Query: 506 tcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagcca 565 | |||| ||||||| ||| | ||| | ||| ||||||||||||| |||||||||||| Sbjct: 2767 taagtggtaaaggatgtgagaa-tgctgaaacaaccaggaggtttgcttagaagcagcca 2825 Query: 566 ccctttaaagagtgcgtaatagctcactg 594 ||||| ||||||||||||||||||||||| Sbjct: 2826 cccttcaaagagtgcgtaatagctcactg 2854 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 75 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 246 bits (124), Expect = 8e-62 Identities = 269/314 (85%), Gaps = 5/314 (1%) Strand = Plus / Plus Query: 88 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 145 |||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 718 ccggagccttagcgaaagcaagtcttaatagggcgataaagtcacttcttatggacccga 777 Query: 146 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 205 ||| ||||||||||| |||| |||||||||||||||| | | || || |||||||||| Sbjct: 778 acccgggtgatctattcatggccaggatgaagcttgggtaacacctagtggaggtccgaa 837 Query: 206 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 265 ||||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 838 ccgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaac 897 Query: 266 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg--actggacatct 323 | ||||||||||| ||||||||||||||||||||||||||| || | | | |||| Sbjct: 898 tcggagctagctggatctccccgaaatgcgttgaggcgcagcggtggctatgagctatct 957 Query: 324 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 382 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 958 agaggtaaagcgactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1017 Query: 383 tgaatactagatat 396 ||||||||||||| Sbjct: 1018 agaatactagatat 1031 Score = 93.7 bits (47), Expect = 7e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 540 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 594 ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1159 ccaggaggtttgcttagaagcagccacccttgaaagagtgcgtaatagctcactg 1213 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 17 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 75 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 651 ctgaccgcgtgcctgttgaagaatgagcctgcgacttatagggagtggcaaggttaagg 709 Score = 75.8 bits (38), Expect = 2e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 460 agagggaaacagcccggatcaccagctaaggcccctaaatga 501 ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1079 agagggaaacagcccagatcaccagctaaggcccctaaatga 1120
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 98 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 157 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 158 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 217 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 218 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 277 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 278 ggttctccccgaaatgcgttgaggcgcagcagttg 312 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 234 bits (118), Expect = 3e-58 Identities = 188/210 (89%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 |||||| ||| ||||| ||||||||||| |||||||| ||| ||||| ||||| ||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggt-gggagtgcacagacaaccagg 687 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 ||||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| Sbjct: 688 aggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgct 747 Query: 605 cttgcgctgaagatgaacggggctaagcga 634 | ||||| ||| |||||||||||||||||| Sbjct: 748 cctgcgccgaaaatgaacggggctaagcga 777 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 325 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 384 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 385 aatac 389 ||||| Sbjct: 550 aatac 554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 16 tctgaccgcgtgcctgttgaagaatgagccggcga 50 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 244 bits (123), Expect = 3e-61 Identities = 262/305 (85%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 88 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 147 |||||||| || |||| ||||||| || ||||||| ||| || |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaac 308 Query: 148 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 207 | ||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 cctggtgatctaaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 208 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 267 ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacca 428 Query: 268 agagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag 325 ||||||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctgg 486 Query: 326 -gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 384 |||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 385 aatac 389 ||||| Sbjct: 547 aatac 551 Score = 190 bits (96), Expect = 4e-45 Identities = 182/208 (87%), Gaps = 2/208 (0%) Strand = Plus / Plus Query: 425 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 484 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 485 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 544 |||||| ||| |||| | ||| ||||||||||||||| ||| ||||| ||||| | ||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggt-gggagtgcagagacaactagg 684 Query: 545 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 604 |||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| Sbjct: 685 aggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgct 744 Query: 605 cttgcgctgaagatgaacggggctaagc 632 | | ||| ||| |||||||||||||||| Sbjct: 745 cct-cgccgaaaatgaacggggctaagc 771 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 60 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 244 bits (123), Expect = 3e-61 Identities = 267/310 (86%), Gaps = 5/310 (1%) Strand = Plus / Plus Query: 88 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 147 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 148 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 207 | |||||||||| |||| |||||||||| |||| | | || || | |||||||||||| Sbjct: 878 ccgggtgatctaatcatggccaggatgaaatttgggtaacaccaaccggaggtccgaacc 937 Query: 208 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 267 ||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | Sbjct: 938 gaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactc 997 Query: 268 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt--gactggacatctag 325 ||||||||||| ||||||||||||||||||||||||||| ||| || | ||||||| Sbjct: 998 ggagctagctggatctccccgaaatgcgttgaggcgcagcggttaagatttaccatctag 1057 Query: 326 gggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 384 ||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||| | Sbjct: 1058 gggtaaagcgactgtttcggtgcgggctgcgaaagcggtaccaagtcgtggcaaactcag 1117 Query: 385 aatactagat 394 |||||||||| Sbjct: 1118 aatactagat 1127 Score = 109 bits (55), Expect = 1e-20 Identities = 116/135 (85%), Gaps = 1/135 (0%) Strand = Plus / Plus Query: 460 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 519 ||||||||||||||| ||||||||||||||||||||||||| | || |||| |||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaagga 1236 Query: 520 ggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtg 579 ||| | ||| | ||| ||||||||||||| ||||||||||||||||| | |||||| Sbjct: 1237 tgtgagaa-tgctgaaacaaccaggaggtttgcttagaagcagccacccttgatagagtg 1295 Query: 580 cgtaatagctcactg 594 ||||||||||||||| Sbjct: 1296 cgtaatagctcactg 1310 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 17 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 98 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 157 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 158 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 217 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 218 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 277 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 278 ggttctccccgaaatgcgttgaggcg 303 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 167 bits (84), Expect = 6e-38 Identities = 169/196 (86%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | |||| |||||||||||||||||| ||| ||||| |||||||||||||||||| Sbjct: 320614 attaacgctaagtgataaaggaggtgggat-tgcccagacaaccaggaggtttgcctaga 320672 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| | Sbjct: 320673 agcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaa 320732 Query: 618 tgaacggggctaagcg 633 |||||||||||||||| Sbjct: 320733 tgaacggggctaagcg 320748 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 320158 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 320205 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcga 373 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Minus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 1775855 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 1775796 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 1775795 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 1775736 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 1775735 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 1775676 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 1775675 agctagctggttctccccgaaatacgttgaggcg 1775642 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 376214 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 376273 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 376274 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 376333 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 376334 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 376393 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 376394 agctagctggttctccccgaaatacgttgaggcg 376427 Score = 163 bits (82), Expect = 9e-37 Identities = 167/194 (86%), Gaps = 1/194 (0%) Strand = Plus / Minus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 1775526 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 1775467 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | | || |||||||||||||||||| |||| ||||| |||||||||||||||||| Sbjct: 1775466 atcaacactaagtgataaaggaggtgggat-tgcatagacaaccaggaggtttgcctaga 1775408 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| ||| || |||||||||||||||||||| ||||||| | ||| | ||| | Sbjct: 1775407 agcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcaccgaaaa 1775348 Query: 618 tgaacggggctaag 631 |||||||||||||| Sbjct: 1775347 tgaacggggctaag 1775334 Score = 163 bits (82), Expect = 9e-37 Identities = 167/194 (86%), Gaps = 1/194 (0%) Strand = Plus / Plus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 376543 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 376602 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | | || |||||||||||||||||| |||| ||||| |||||||||||||||||| Sbjct: 376603 atcaacactaagtgataaaggaggtgggat-tgcatagacaaccaggaggtttgcctaga 376661 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| ||| || |||||||||||||||||||| ||||||| | ||| | ||| | Sbjct: 376662 agcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcaccgaaaa 376721 Query: 618 tgaacggggctaag 631 |||||||||||||| Sbjct: 376722 tgaacggggctaag 376735 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1775922 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 1775875 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 376147 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 376194 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 98 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 157 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 158 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 217 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 218 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 277 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 278 ggttctccccgaaatgcgttgaggcg 303 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 159 bits (80), Expect = 1e-35 Identities = 168/196 (85%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2977 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3036 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | |||| |||||||||||||||||| ||| ||||| |||||||||||||||||| Sbjct: 3037 attaacgctaagtgataaaggaggtgggat-tgcccagacaaccaggaggtttgcctaga 3095 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| | Sbjct: 3096 agcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaa 3155 Query: 618 tgaacggggctaagcg 633 |||| ||||||||||| Sbjct: 3156 tgaatggggctaagcg 3171 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2581 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2628 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcga 373 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 98 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 157 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 158 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 217 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 218 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 277 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 278 ggttctccccgaaatgcgttgaggcg 303 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 159 bits (80), Expect = 1e-35 Identities = 168/196 (85%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2978 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3037 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | |||| |||||||||||||||||| ||| ||||| |||||||||||||||||| Sbjct: 3038 attaacgctaagtgataaaggaggtgggat-tgcccagacaaccaggaggtttgcctaga 3096 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| | Sbjct: 3097 agcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaa 3156 Query: 618 tgaacggggctaagcg 633 |||| ||||||||||| Sbjct: 3157 tgaatggggctaagcg 3172 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2582 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2629 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcga 373 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 90 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 149 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2876 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 2935 Query: 150 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 209 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2936 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2995 Query: 210 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 269 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2996 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 3055 Query: 270 agctagctggttctccccgaaatgcgttgaggcg 303 ||||||||||||||||||||||| |||||||||| Sbjct: 3056 agctagctggttctccccgaaatacgttgaggcg 3089 Score = 155 bits (78), Expect = 2e-34 Identities = 166/194 (85%), Gaps = 1/194 (0%) Strand = Plus / Plus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 3205 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 3264 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | | || |||||||| ||||||||| |||| ||||| |||||||||||||||||| Sbjct: 3265 atcaacactaagtgataagggaggtgggat-tgcatagacaaccaggaggtttgcctaga 3323 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| ||| || |||||||||||||||||||| ||||||| | ||| | ||| | Sbjct: 3324 agcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcaccgaaaa 3383 Query: 618 tgaacggggctaag 631 |||||||||||||| Sbjct: 3384 tgaacggggctaag 3397 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2809 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2856 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 3127 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 3177
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 1e-60 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 98 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 157 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 158 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 217 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 218 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 277 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 278 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 334 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 335 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 389 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 202 bits (102), Expect = 1e-48 Identities = 182/206 (88%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 426 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 485 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 486 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 545 ||||| ||| |||||| || ||||| ||||||||| ||| ||||| |||| |||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggt-gggagtgcattgacaaccagga 684 Query: 546 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 605 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 744 Query: 606 ttgcgctgaagatgaacggggctaag 631 | ||| ||| ||||||||||||||| Sbjct: 745 ct-cgccgaaaatgaacggggctaag 769 Score = 65.9 bits (33), Expect = 2e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 16 tctgaccgcgtgcctgttgaagaatgagccggcgact 52 |||||||| |||||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcgact 218
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 98 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 157 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 158 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 217 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 218 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 277 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 278 ggttctccccgaaatgcgttgaggcg 303 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 167 bits (84), Expect = 6e-38 Identities = 169/196 (86%), Gaps = 1/196 (0%) Strand = Plus / Minus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 19844 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | |||| |||||||||||||||||| ||| ||||| |||||||||||||||||| Sbjct: 19843 attaacgctaagtgataaaggaggtgggat-tgcccagacaaccaggaggtttgcctaga 19785 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| | Sbjct: 19784 agcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaa 19725 Query: 618 tgaacggggctaagcg 633 |||||||||||||||| Sbjct: 19724 tgaacggggctaagcg 19709 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 20299 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 20252 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcga 373 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 98 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 157 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 158 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 217 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 218 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 277 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 278 ggttctccccgaaatgcgttgaggcg 303 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 167 bits (84), Expect = 6e-38 Identities = 169/196 (86%), Gaps = 1/196 (0%) Strand = Plus / Minus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 1598 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | |||| |||||||||||||||||| ||| ||||| |||||||||||||||||| Sbjct: 1597 attaacgctaagtgataaaggaggtgggat-tgcccagacaaccaggaggtttgcctaga 1539 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| | Sbjct: 1538 agcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaa 1479 Query: 618 tgaacggggctaagcg 633 |||||||||||||||| Sbjct: 1478 tgaacggggctaagcg 1463 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2053 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2006 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcga 373 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 98 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 157 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 158 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 217 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 218 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 277 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 278 ggttctccccgaaatgcgttgaggcg 303 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 159 bits (80), Expect = 1e-35 Identities = 168/196 (85%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 438 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 497 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 316043 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 316102 Query: 498 atgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctaga 557 || | |||| |||||||||||||||||| ||| ||||| |||||||||||||||||| Sbjct: 316103 attaacgctaagtgataaaggaggtgggat-tgcccagacaaccaggaggtttgcctaga 316161 Query: 558 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 617 |||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| | Sbjct: 316162 agcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaa 316221 Query: 618 tgaacggggctaagcg 633 |||| ||||||||||| Sbjct: 316222 tgaatggggctaagcg 316237 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 18 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 65 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 315647 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 315694 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 339 tttcggtgcgggctgcgcgagcggtaccaaatcga 373 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,877,953 Number of Sequences: 3902068 Number of extensions: 3877953 Number of successful extensions: 74206 Number of sequences better than 10.0: 2950 Number of HSP's better than 10.0 without gapping: 2982 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 55227 Number of HSP's gapped (non-prelim): 17916 length of query: 638 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 615 effective length of database: 17,143,297,704 effective search space: 10543128087960 effective search space used: 10543128087960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
