>IF3A_HUMAN (Q14152) Eukaryotic translation initiation factor 3 subunit 10|
           (eIF-3 theta) (eIF3 p167) (eIF3 p180) (eIF3 p185)
           (eIF3a)
          Length = 1382

 Score =  101 bits (251), Expect = 6e-22
 Identities = 48/52 (92%), Positives = 49/52 (94%)
 Frame = +1

Query: 1   NALKRANEFLEXGKKQPALDVLYDVIKSKKHRTWQKXHEPIMLKXLELCVDL 156
           NALKRANEFLE GKKQPALDVLYDV+KSKKHRTWQK HEPIMLK LELCVDL
Sbjct: 10  NALKRANEFLEVGKKQPALDVLYDVMKSKKHRTWQKIHEPIMLKYLELCVDL 61

>IF3A_MOUSE (P23116) Eukaryotic translation initiation factor 3 subunit 10|
           (eIF-3 theta) (eIF3 p167) (eIF3 p180) (eIF3 p185)
           (eIF3a) (p162 protein) (Centrosomin)
          Length = 1344

 Score =  101 bits (251), Expect = 6e-22
 Identities = 48/52 (92%), Positives = 49/52 (94%)
 Frame = +1

Query: 1   NALKRANEFLEXGKKQPALDVLYDVIKSKKHRTWQKXHEPIMLKXLELCVDL 156
           NALKRANEFLE GKKQPALDVLYDV+KSKKHRTWQK HEPIMLK LELCVDL
Sbjct: 10  NALKRANEFLEVGKKQPALDVLYDVMKSKKHRTWQKIHEPIMLKYLELCVDL 61

>IF3A_MAIZE (Q9XHR2) Eukaryotic translation initiation factor 3 subunit 10|
           (eIF-3 theta) (Eukaryotic translation initiation factor
           3 large subunit) (eIF3a)
          Length = 962

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 31/52 (59%), Positives = 40/52 (76%)
 Frame = +1

Query: 1   NALKRANEFLEXGKKQPALDVLYDVIKSKKHRTWQKXHEPIMLKXLELCVDL 156
           NALKRA E +  G+KQ AL  L+D+I SK++R+WQK  E IM+K +ELCVDL
Sbjct: 9   NALKRAEELIHVGQKQSALQALHDLITSKRYRSWQKPLEKIMMKYVELCVDL 60

>IF3A_ARATH (Q9LD55) Eukaryotic translation initiation factor 3 subunit 10|
           (eIF-3 theta) (Eukaryotic translation initiation factor
           3 large subunit) (eIF3a) (p114)
          Length = 987

 Score = 65.9 bits (159), Expect = 3e-11
 Identities = 31/52 (59%), Positives = 39/52 (75%)
 Frame = +1

Query: 1   NALKRANEFLEXGKKQPALDVLYDVIKSKKHRTWQKXHEPIMLKXLELCVDL 156
           NALKRA+E +  G+KQ AL  L+D+I SK++R WQK  E IM K L+LCVDL
Sbjct: 9   NALKRADELINVGQKQDALQALHDLITSKRYRAWQKPLEKIMFKYLDLCVDL 60

>IF3A_CAEEL (P34339) Probable eukaryotic translation initiation factor 3|
           subunit 10 (eIF-3 theta) (eIF3a) (Egg-laying defective
           protein 45)
          Length = 1076

 Score = 65.9 bits (159), Expect = 3e-11
 Identities = 28/51 (54%), Positives = 38/51 (74%)
 Frame = +1

Query: 4   ALKRANEFLEXGKKQPALDVLYDVIKSKKHRTWQKXHEPIMLKXLELCVDL 156
           ALKRA E ++ GK+  ALD L+D IK+++H+ W   HE IM+K +ELCVDL
Sbjct: 12  ALKRAEELIQVGKESDALDTLHDTIKARRHKQWTTVHEQIMIKHMELCVDL 62

>IF3A_TOBAC (Q40554) Eukaryotic translation initiation factor 3 subunit 10|
           (eIF-3 theta) (Eukaryotic translation initiation factor
           3 large subunit) (eIF3a) (PNLA-35)
          Length = 958

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = +1

Query: 1   NALKRANEFLEXGKKQPALDVLYDVIKSKKHRTWQKXHEPIMLKXLELCVDL 156
           NALKRA E +  G+KQ AL  L+D+I S+++R WQK  E IM K +ELCVD+
Sbjct: 9   NALKRAEELITVGQKQEALQALHDLITSRRYRAWQKTLERIMFKYVELCVDM 60

>IF3A_YEAST (P38249) Eukaryotic translation initiation factor 3 110 kDa subunit|
           (eIF3 p110) (Translation initiation factor eIF3, p110
           subunit) (eIF3a)
          Length = 964

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
 Frame = +1

Query: 1   NALKRANEFLEXGKKQPALDVLYDVIKSKKHR-TWQKXHEPIMLKXLELCVDL 156
           NA+KRA+E +  G+KQ AL  L+D I +++ R       EP++ K LE+ V+L
Sbjct: 10  NAIKRADELISVGEKQAALQSLHDFITARRIRWATPSTVEPVVFKFLEIGVEL 62

>IF3A_SCHPO (O74760) Probable eukaryotic translation initiation factor 3 110|
           kDa subunit (eIF3 p110) (Translation initiation factor
           eIF3, p110 subunit) (eIF3a)
          Length = 932

 Score = 35.4 bits (80), Expect = 0.043
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +1

Query: 1   NALKRANEFLEXGKKQPALDVLYDVIKSKKHRTWQKXH-EPIMLKXLELCVDL 156
           N L+ A+E +   +   AL  L++ I  K+ R  Q    EPIM++ +ELCV L
Sbjct: 10  NVLRLADELIALDQHSSALQSLHETIVLKRSRNAQGFSLEPIMMRFIELCVHL 62


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,867,038
Number of Sequences: 219361
Number of extensions: 230529
Number of successful extensions: 672
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 80,573,946
effective HSP length: 27
effective length of database: 74,651,199
effective search space used: 1791628776
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)