| Clone Name | basd1n07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SELK_HUMAN (Q9Y6D0) Selenoprotein K | 36 | 0.070 | 2 | SELK_CHILA (Q6S9C4) Selenoprotein K | 36 | 0.070 | 3 | SELK_RAT (P59798) Selenoprotein K | 35 | 0.20 | 4 | SELK_MOUSE (Q9JLJ1) Selenoprotein K | 33 | 0.77 |
|---|
>SELK_HUMAN (Q9Y6D0) Selenoprotein K| Length = 94 Score = 36.2 bits (82), Expect = 0.070 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Frame = +3 Query: 36 MAYVERGVVKGKRTI--WRLSIIPDFFKAVVNFIRMFFLTM 152 M Y+ G V R+ WRLS+I DFF + F+ +FF T+ Sbjct: 1 MVYISNGQVLDSRSQSPWRLSLITDFFWGIAEFVVLFFKTL 41
>SELK_CHILA (Q6S9C4) Selenoprotein K| Length = 94 Score = 36.2 bits (82), Expect = 0.070 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Frame = +3 Query: 36 MAYVERGVVKGKRTI--WRLSIIPDFFKAVVNFIRMFFLTM 152 M Y+ G V R+ WRLS+I DFF + F+ +FF T+ Sbjct: 1 MVYISNGQVLDSRSQSPWRLSLITDFFWGIAEFVVLFFKTL 41
>SELK_RAT (P59798) Selenoprotein K| Length = 94 Score = 34.7 bits (78), Expect = 0.20 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = +3 Query: 36 MAYVERGVVKGKR--TIWRLSIIPDFFKAVVNFIRMFFLTM 152 M Y+ G V R + WRLS I DFF + F+ FF T+ Sbjct: 1 MVYISNGQVLDSRNQSPWRLSFITDFFWGIAEFVVFFFKTL 41
>SELK_MOUSE (Q9JLJ1) Selenoprotein K| Length = 94 Score = 32.7 bits (73), Expect = 0.77 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = +3 Query: 36 MAYVERGVVKGKR--TIWRLSIIPDFFKAVVNFIRMFFLTM 152 M Y+ G V R + WR+S + DFF + F+ FF T+ Sbjct: 1 MVYISNGQVLDSRNQSPWRVSFLTDFFWGIAEFVVFFFKTL 41 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,038,885 Number of Sequences: 219361 Number of extensions: 1106362 Number of successful extensions: 2631 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2548 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2627 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)