| Clone Name | basd2b18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY029319.1| Zea mays seven transmembrane protein Mlo8 mRNA, complete cds Length = 1798 Score = 394 bits (199), Expect = e-106 Identities = 433/509 (85%), Gaps = 4/509 (0%) Strand = Plus / Plus Query: 79 tgtccctcgaagctatacatcagttgcatattttcatatttgtgctggctattacacatg 138 ||||||| ||||| ||||||||| |||| |||||||||||||| ||||| || ||||||| Sbjct: 500 tgtcccttgaagccatacatcagctgcacattttcatatttgttctggcaatcacacatg 559 Query: 139 ttgtattcagtgttttgacaatgcttttaggaggggcaaagatacatcaatggaaactgt 198 || | ||||| || || |||||||||||||| ||| ||||||| |||||||||| || Sbjct: 560 ttattttcagcgtcacaactatgcttttaggaggtgcacagatacaccaatggaaacagt 619 Query: 199 gggaggatgccattcagaaagatactgcaggaaatgggcccaagaaggtgaacaatgtac 258 ||||| ||| ||| | |||||| || | ||||||||||| ||| || | |||||||| Sbjct: 620 gggagaatggaattaaaaaagatgctcctggaaatgggcctaag---gtaaccaatgtac 676 Query: 259 gcaatttcgaatttatcagggagcattttaagggtattggcaaagattctagaatattga 318 || |||||||||| | | | |||||||||||||||||||||||||| |||||||| Sbjct: 677 atcatcatgaatttatcaagaaacgttttaagggtattggcaaagattctataatattga 736 Query: 319 gttggctgcattcgtttttcaagcagttctatggatcagtaagtaaaaccgactacacca 378 ||||||||||||| ||| |||||||| ||| |||||||| |||| | || ||||||| Sbjct: 737 gttggctgcattcttttggtaagcagttttatagatcagtatctaaatcagattacacca 796 Query: 379 caatgcgtcttggttttatcatgacccacttgccgtggaaacctgaaattcgatttccat 438 ||||||||||||||||||||||||| |||| ||| |||||| | ||||| ||||||||| Sbjct: 797 caatgcgtcttggttttatcatgactcact-gccctggaaatccaaaatttgatttccat 855 Query: 439 aaatacatgctgcgggttttagagtctgattttaagaaggtggttgggataagctggtac 498 | ||||||| | ||||||||||| | ||||||||||| ||||| || |||||||||||| Sbjct: 856 agatacatggtaagggttttagaggcggattttaagaaagtggtaggcataagctggtac 915 Query: 499 ttgtgggtcttcgtggtgatctttctgttgctgaatgttaatgggtggcacacatacttt 558 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 916 ttgtgggtcttcgtggtgatatttctgttgctgaatgttaatggctggcacacatacttt 975 Query: 559 tggatcgcattcattccccttattcttct 587 ||||| || ||| |||||||||||||||| Sbjct: 976 tggattgctttccttccccttattcttct 1004
>gb|AY104078.1| Zea mays PCO070411 mRNA sequence Length = 1798 Score = 394 bits (199), Expect = e-106 Identities = 433/509 (85%), Gaps = 4/509 (0%) Strand = Plus / Plus Query: 79 tgtccctcgaagctatacatcagttgcatattttcatatttgtgctggctattacacatg 138 ||||||| ||||| ||||||||| |||| |||||||||||||| ||||| || ||||||| Sbjct: 500 tgtcccttgaagccatacatcagctgcacattttcatatttgttctggcaatcacacatg 559 Query: 139 ttgtattcagtgttttgacaatgcttttaggaggggcaaagatacatcaatggaaactgt 198 || | ||||| || || |||||||||||||| ||| ||||||| |||||||||| || Sbjct: 560 ttattttcagcgtcacaactatgcttttaggaggtgcacagatacaccaatggaaacagt 619 Query: 199 gggaggatgccattcagaaagatactgcaggaaatgggcccaagaaggtgaacaatgtac 258 ||||| ||| ||| | |||||| || | ||||||||||| ||| || | |||||||| Sbjct: 620 gggagaatggaattaaaaaagatgctcctggaaatgggcctaag---gtaaccaatgtac 676 Query: 259 gcaatttcgaatttatcagggagcattttaagggtattggcaaagattctagaatattga 318 || |||||||||| | | | |||||||||||||||||||||||||| |||||||| Sbjct: 677 atcatcatgaatttatcaagaaacgttttaagggtattggcaaagattctataatattga 736 Query: 319 gttggctgcattcgtttttcaagcagttctatggatcagtaagtaaaaccgactacacca 378 ||||||||||||| ||| |||||||| ||| |||||||| |||| | || ||||||| Sbjct: 737 gttggctgcattcttttggtaagcagttttatagatcagtatctaaatcagattacacca 796 Query: 379 caatgcgtcttggttttatcatgacccacttgccgtggaaacctgaaattcgatttccat 438 ||||||||||||||||||||||||| |||| ||| |||||| | ||||| ||||||||| Sbjct: 797 caatgcgtcttggttttatcatgactcact-gccctggaaatccaaaatttgatttccat 855 Query: 439 aaatacatgctgcgggttttagagtctgattttaagaaggtggttgggataagctggtac 498 | ||||||| | ||||||||||| | ||||||||||| ||||| || |||||||||||| Sbjct: 856 agatacatggtaagggttttagaggcggattttaagaaagtggtaggcataagctggtac 915 Query: 499 ttgtgggtcttcgtggtgatctttctgttgctgaatgttaatgggtggcacacatacttt 558 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 916 ttgtgggtcttcgtggtgatatttctgttgctgaatgttaatggctggcacacatacttt 975 Query: 559 tggatcgcattcattccccttattcttct 587 ||||| || ||| |||||||||||||||| Sbjct: 976 tggattgctttccttccccttattcttct 1004
>dbj|AK121347.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121J07, full insert sequence Length = 2921 Score = 264 bits (133), Expect = 3e-67 Identities = 275/321 (85%), Gaps = 1/321 (0%) Strand = Plus / Plus Query: 267 gaatttatcagggagcattttaagggtattggcaaagattctagaatattgagttggctg 326 |||||||||| || ||||||||||| || |||||||| |||| |||||||||||||||| Sbjct: 1563 gaatttatcaatgatcattttaagggcatgggcaaagactctaaaatattgagttggctg 1622 Query: 327 cattcgtttttcaagcagttctatggatcagtaagtaaaaccgactacaccacaatgcgt 386 ||||| ||| | |||||||| ||||||||||| |||| | || || || ||||||||| Sbjct: 1623 cattcttttgttaagcagttttatggatcagtttctaaatcggattatacaacaatgcgt 1682 Query: 387 cttggttttatcatgacccacttgccgtggaaacctgaaattcgatttccataaatacat 446 ||||| ||||||||||| || ||| |||||||||| ||||| ||||||||||||||||| Sbjct: 1683 cttggctttatcatgactca-ttgtcgtggaaacccaaaatttgatttccataaatacat 1741 Query: 447 gctgcgggttttagagtctgattttaagaaggtggttgggataagctggtacttgtgggt 506 | || |||| ||||||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 1742 gatgagggtcttagagtctgactttaagaaagtggttggcataagctggtacttgtgggt 1801 Query: 507 cttcgtggtgatctttctgttgctgaatgttaatgggtggcacacatacttttggatcgc 566 || || |||||||| || ||||||||||| || || |||||||| ||||||||||| || Sbjct: 1802 ttttgttgtgatcttcctcttgctgaatgtcaacggttggcacacgtacttttggattgc 1861 Query: 567 attcattccccttattcttct 587 || ||||||| |||||||| Sbjct: 1862 ttttcttcccctaattcttct 1882 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 61 agggaaaagctccgttgatgtccctcgaagctatacatcagttgcatattttcatatttg 120 |||| |||| ||| ||| ||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 1093 aggggaaagttccattgctgtcccttgaagccatacatcaattgcatattttcatatttg 1152 Query: 121 tgctggctattacacatgttgtattcagtgttt 153 | |||||||| ||||||||| | |||||||||| Sbjct: 1153 ttctggctatcacacatgttattttcagtgttt 1185 Score = 40.1 bits (20), Expect = 8.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 178 agatacatcaatggaaactgtgggaggatgccattcagaaagat 221 ||||||| |||||||||| ||||||| || |||||||||||| Sbjct: 1306 agatacaccaatggaaacaatgggaggttgaaattcagaaagat 1349
>ref|NM_190204.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1509 Score = 250 bits (126), Expect = 4e-63 Identities = 426/522 (81%), Gaps = 3/522 (0%) Strand = Plus / Plus Query: 59 caagggaaaagctccgttgatgtccctcgaagctatacatcagttgcatattttcatatt 118 ||||||||| | ||| ||| |||| || ||||| | |||||||||||||||||||| || Sbjct: 414 caagggaaaggttcctttgctgtcacttgaagcactccatcagttgcatattttcatttt 473 Query: 119 tgtgctggctattacacatgttgtattcagtgttttgacaatgcttttaggaggggcaaa 178 ||| ||||| || |||||||| | ||||||| | |||| |||||| | ||||| || || Sbjct: 474 tgttctggccatcacacatgtgattttcagtgctctgactatgcttcttggaggagcgaa 533 Query: 179 gatacatcaatggaaactgtgggaggatgccattcagaaagatactgcaggaaatgggcc 238 ||| ||||||||||||| ||||| ||| ||| ||||||||| ||| ||||| ||| Sbjct: 534 gattcatcaatggaaacactgggaaaatgacatccagaaagatgttgctcaaaatgcgcc 593 Query: 239 caagaaggtgaacaatgtacg-caatttcgaatttatcagggagcattttaagggtattg 297 ||||||||||| | |||| | |||||| |||||||||||||| | ||||||||||||| Sbjct: 594 caagaaggtgacccatgtgcatcaattt-gaatttatcagggaacgctttaagggtattg 652 Query: 298 gcaaagattctagaatattgagttggctgcattcgtttttcaagcagttctatggatcag 357 |||||||||| | |||| | || ||||||||||| ||| | |||||||| | ||| |||| Sbjct: 653 gcaaagattccataatactaagctggctgcattcttttgttaagcagttttctgggtcag 712 Query: 358 taagtaaaaccgactacaccacaatgcgtcttggttttatcatgacccacttgccgtgga 417 | | |||| | ||||||| |||||||| ||||| |||||| ||| || |||||||| Sbjct: 713 ttactaaatcagactacataacaatgcgacttggatttatccagacaca-ttgccgtgcg 771 Query: 418 aacctgaaattcgatttccataaatacatgctgcgggttttagagtctgattttaagaag 477 |||| || ||||||||||| | ||||||| | || | ||| || | ||||||||||| Sbjct: 772 aacccaaagttcgatttccacagatacatggtacgagctttggaagcagattttaagaaa 831 Query: 478 gtggttgggataagctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgtt 537 |||||||| |||||||||||||||||| | ||||| |||| || ||| ||||||||||| Sbjct: 832 gtggttggtataagctggtacttgtggatattcgttatgatattcctgctgctgaatgtt 891 Query: 538 aatgggtggcacacatacttttggatcgcattcattcccctt 579 ||||| ||||||||||||||||||||| | ||| |||||||| Sbjct: 892 aatggttggcacacatacttttggatctccttcgttcccctt 933
>dbj|AK121374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C14, full insert sequence Length = 2115 Score = 250 bits (126), Expect = 4e-63 Identities = 426/522 (81%), Gaps = 3/522 (0%) Strand = Plus / Plus Query: 59 caagggaaaagctccgttgatgtccctcgaagctatacatcagttgcatattttcatatt 118 ||||||||| | ||| ||| |||| || ||||| | |||||||||||||||||||| || Sbjct: 674 caagggaaaggttcctttgctgtcacttgaagcactccatcagttgcatattttcatttt 733 Query: 119 tgtgctggctattacacatgttgtattcagtgttttgacaatgcttttaggaggggcaaa 178 ||| ||||| || |||||||| | ||||||| | |||| |||||| | ||||| || || Sbjct: 734 tgttctggccatcacacatgtgattttcagtgctctgactatgcttcttggaggagcgaa 793 Query: 179 gatacatcaatggaaactgtgggaggatgccattcagaaagatactgcaggaaatgggcc 238 ||| ||||||||||||| ||||| ||| ||| ||||||||| ||| ||||| ||| Sbjct: 794 gattcatcaatggaaacactgggaaaatgacatccagaaagatgttgctcaaaatgcgcc 853 Query: 239 caagaaggtgaacaatgtacg-caatttcgaatttatcagggagcattttaagggtattg 297 ||||||||||| | |||| | |||||| |||||||||||||| | ||||||||||||| Sbjct: 854 caagaaggtgacccatgtgcatcaattt-gaatttatcagggaacgctttaagggtattg 912 Query: 298 gcaaagattctagaatattgagttggctgcattcgtttttcaagcagttctatggatcag 357 |||||||||| | |||| | || ||||||||||| ||| | |||||||| | ||| |||| Sbjct: 913 gcaaagattccataatactaagctggctgcattcttttgttaagcagttttctgggtcag 972 Query: 358 taagtaaaaccgactacaccacaatgcgtcttggttttatcatgacccacttgccgtgga 417 | | |||| | ||||||| |||||||| ||||| |||||| ||| || |||||||| Sbjct: 973 ttactaaatcagactacataacaatgcgacttggatttatccagacaca-ttgccgtgcg 1031 Query: 418 aacctgaaattcgatttccataaatacatgctgcgggttttagagtctgattttaagaag 477 |||| || ||||||||||| | ||||||| | || | ||| || | ||||||||||| Sbjct: 1032 aacccaaagttcgatttccacagatacatggtacgagctttggaagcagattttaagaaa 1091 Query: 478 gtggttgggataagctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgtt 537 |||||||| |||||||||||||||||| | ||||| |||| || ||| ||||||||||| Sbjct: 1092 gtggttggtataagctggtacttgtggatattcgttatgatattcctgctgctgaatgtt 1151 Query: 538 aatgggtggcacacatacttttggatcgcattcattcccctt 579 ||||| ||||||||||||||||||||| | ||| |||||||| Sbjct: 1152 aatggttggcacacatacttttggatctccttcgttcccctt 1193
>dbj|AB011444.1| Triticum aestivum WESR3 mRNA, partial cds Length = 310 Score = 198 bits (100), Expect = 1e-47 Identities = 103/104 (99%) Strand = Plus / Plus Query: 484 gggataagctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgttaatggg 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 gggataagctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgttaatggg 61 Query: 544 tggcacacatacttttggatcgcattcattccccttattcttct 587 |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 62 tggcacacatacttttggattgcattcattccccttattcttct 105
>dbj|AK072733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141N06, full insert sequence Length = 1089 Score = 184 bits (93), Expect = 2e-43 Identities = 259/313 (82%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 267 gaatttatcagggagcattttaagggtattggcaaagattctagaatattgagttggctg 326 |||||||||||||| | ||||||||||||||||||||||| | |||| | || |||||| Sbjct: 27 gaatttatcagggaacgctttaagggtattggcaaagattccataatactaagctggctg 86 Query: 327 cattcgtttttcaagcagttctatggatcagtaagtaaaaccgactacaccacaatgcgt 386 ||||| ||| | |||||||| | ||| ||||| | |||| | ||||||| |||||||| Sbjct: 87 cattcttttgttaagcagttttctgggtcagttactaaatcagactacataacaatgcga 146 Query: 387 cttggttttatcatgacccacttgccgtggaaacctgaaattcgatttccataaatacat 446 ||||| |||||| ||| || |||||||| |||| || ||||||||||| | |||||| Sbjct: 147 cttggatttatccagacaca-ttgccgtgcgaacccaaagttcgatttccacagatacat 205 Query: 447 gctgcgggttttagagtctgattttaagaaggtggttgggataagctggtacttgtgggt 506 | | || | ||| || | ||||||||||| |||||||| |||||||||||||||||| | Sbjct: 206 ggtacgagctttggaagcagattttaagaaagtggttggtataagctggtacttgtggat 265 Query: 507 cttcgtggtgatctttctgttgctgaatgttaatgggtggcacacatacttttggatcgc 566 ||||| |||| || ||| |||||||||||||||| ||||||||||||||||||||| | Sbjct: 266 attcgttatgatattcctgctgctgaatgttaatggttggcacacatacttttggatctc 325 Query: 567 attcattcccctt 579 ||| |||||||| Sbjct: 326 cttcgttcccctt 338
>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01, complete sequence Length = 173074 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Minus Query: 61 agggaaaagctccgttgatgtccctcgaagctatacatcagttgcatattttcatatttg 120 |||| |||| ||| ||| ||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 15772 aggggaaagttccattgctgtcccttgaagccatacatcaattgcatattttcatatttg 15713 Query: 121 tgctggctattacacatgttgtattcagtgttt 153 | |||||||| ||||||||| | |||||||||| Sbjct: 15712 ttctggctatcacacatgttattttcagtgttt 15680 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 412 cgtggaaacctgaaattcgatttccataaatacatgctgcgggttttagagtctgatttt 471 |||||||||| ||||| |||||||||||||||||| || |||| ||||||||||| ||| Sbjct: 14893 cgtggaaacccaaaatttgatttccataaatacatgatgagggtcttagagtctgacttt 14834 Query: 472 aagaaggtggttgggataag 491 ||||| |||||||| ||||| Sbjct: 14833 aagaaagtggttggcataag 14814 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 267 gaatttatcagggagcattttaagggtattggcaaagattctagaatattgagttggctg 326 |||||||||| || ||||||||||| || |||||||| |||| |||||||||||||||| Sbjct: 15302 gaatttatcaatgatcattttaagggcatgggcaaagactctaaaatattgagttggctg 15243 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 490 agctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgt 536 ||||||||||||||||| || || |||||||| || ||||||||||| Sbjct: 14705 agctggtacttgtgggtttttgttgtgatcttcctcttgctgaatgt 14659 Score = 48.1 bits (24), Expect = 0.033 Identities = 63/76 (82%) Strand = Plus / Minus Query: 326 gcattcgtttttcaagcagttctatggatcagtaagtaaaaccgactacaccacaatgcg 385 |||||| ||| | |||||||| ||||||||||| |||| | || || || |||||||| Sbjct: 15053 gcattcttttgttaagcagttttatggatcagtttctaaatcggattatacaacaatgcg 14994 Query: 386 tcttggttttatcatg 401 |||||| ||||||||| Sbjct: 14993 tcttggctttatcatg 14978 Score = 40.1 bits (20), Expect = 8.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 178 agatacatcaatggaaactgtgggaggatgccattcagaaagat 221 ||||||| |||||||||| ||||||| || |||||||||||| Sbjct: 15559 agatacaccaatggaaacaatgggaggttgaaattcagaaagat 15516
>gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0579A05, complete sequence Length = 107407 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Minus Query: 61 agggaaaagctccgttgatgtccctcgaagctatacatcagttgcatattttcatatttg 120 |||| |||| ||| ||| ||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 77617 aggggaaagttccattgctgtcccttgaagccatacatcaattgcatattttcatatttg 77558 Query: 121 tgctggctattacacatgttgtattcagtgttt 153 | |||||||| ||||||||| | |||||||||| Sbjct: 77557 ttctggctatcacacatgttattttcagtgttt 77525 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 412 cgtggaaacctgaaattcgatttccataaatacatgctgcgggttttagagtctgatttt 471 |||||||||| ||||| |||||||||||||||||| || |||| ||||||||||| ||| Sbjct: 76738 cgtggaaacccaaaatttgatttccataaatacatgatgagggtcttagagtctgacttt 76679 Query: 472 aagaaggtggttgggataag 491 ||||| |||||||| ||||| Sbjct: 76678 aagaaagtggttggcataag 76659 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 267 gaatttatcagggagcattttaagggtattggcaaagattctagaatattgagttggctg 326 |||||||||| || ||||||||||| || |||||||| |||| |||||||||||||||| Sbjct: 77147 gaatttatcaatgatcattttaagggcatgggcaaagactctaaaatattgagttggctg 77088 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 490 agctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgt 536 ||||||||||||||||| || || |||||||| || ||||||||||| Sbjct: 76550 agctggtacttgtgggtttttgttgtgatcttcctcttgctgaatgt 76504 Score = 48.1 bits (24), Expect = 0.033 Identities = 63/76 (82%) Strand = Plus / Minus Query: 326 gcattcgtttttcaagcagttctatggatcagtaagtaaaaccgactacaccacaatgcg 385 |||||| ||| | |||||||| ||||||||||| |||| | || || || |||||||| Sbjct: 76898 gcattcttttgttaagcagttttatggatcagtttctaaatcggattatacaacaatgcg 76839 Query: 386 tcttggttttatcatg 401 |||||| ||||||||| Sbjct: 76838 tcttggctttatcatg 76823 Score = 40.1 bits (20), Expect = 8.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 178 agatacatcaatggaaactgtgggaggatgccattcagaaagat 221 ||||||| |||||||||| ||||||| || |||||||||||| Sbjct: 77404 agatacaccaatggaaacaatgggaggttgaaattcagaaagat 77361
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Minus Query: 61 agggaaaagctccgttgatgtccctcgaagctatacatcagttgcatattttcatatttg 120 |||| |||| ||| ||| ||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 20344027 aggggaaagttccattgctgtcccttgaagccatacatcaattgcatattttcatatttg 20343968 Query: 121 tgctggctattacacatgttgtattcagtgttt 153 | |||||||| ||||||||| | |||||||||| Sbjct: 20343967 ttctggctatcacacatgttattttcagtgttt 20343935 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 412 cgtggaaacctgaaattcgatttccataaatacatgctgcgggttttagagtctgatttt 471 |||||||||| ||||| |||||||||||||||||| || |||| ||||||||||| ||| Sbjct: 20343148 cgtggaaacccaaaatttgatttccataaatacatgatgagggtcttagagtctgacttt 20343089 Query: 472 aagaaggtggttgggataag 491 ||||| |||||||| ||||| Sbjct: 20343088 aagaaagtggttggcataag 20343069 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 267 gaatttatcagggagcattttaagggtattggcaaagattctagaatattgagttggctg 326 |||||||||| || ||||||||||| || |||||||| |||| |||||||||||||||| Sbjct: 20343557 gaatttatcaatgatcattttaagggcatgggcaaagactctaaaatattgagttggctg 20343498 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 490 agctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgt 536 ||||||||||||||||| || || |||||||| || ||||||||||| Sbjct: 20342960 agctggtacttgtgggtttttgttgtgatcttcctcttgctgaatgt 20342914 Score = 48.1 bits (24), Expect = 0.033 Identities = 63/76 (82%) Strand = Plus / Minus Query: 326 gcattcgtttttcaagcagttctatggatcagtaagtaaaaccgactacaccacaatgcg 385 |||||| ||| | |||||||| ||||||||||| |||| | || || || |||||||| Sbjct: 20343308 gcattcttttgttaagcagttttatggatcagtttctaaatcggattatacaacaatgcg 20343249 Query: 386 tcttggttttatcatg 401 |||||| ||||||||| Sbjct: 20343248 tcttggctttatcatg 20343233 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gcggctgctcagcggcggcg 33 |||||||||||||||||||| Sbjct: 28944546 gcggctgctcagcggcggcg 28944527 Score = 40.1 bits (20), Expect = 8.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 178 agatacatcaatggaaactgtgggaggatgccattcagaaagat 221 ||||||| |||||||||| ||||||| || |||||||||||| Sbjct: 20343814 agatacaccaatggaaacaatgggaggttgaaattcagaaagat 20343771
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 58.0 bits (29), Expect = 3e-05 Identities = 64/73 (87%), Gaps = 2/73 (2%) Strand = Plus / Plus Query: 236 gcccaagaaggtgaacaatgtac-gcaatttcgaatttatcagggagcattttaagggta 294 |||||||||||||| | |||| | |||||| |||||||||||||| | |||||||||| Sbjct: 38622974 gcccaagaaggtgacccatgtgcatcaattt-gaatttatcagggaacgctttaagggta 38623032 Query: 295 ttggcaaagattc 307 ||||||||||||| Sbjct: 38623033 ttggcaaagattc 38623045 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 96 catcagttgcatattttcatatttgtgctggctattacacatgttgtattcagtgttttg 155 |||||||||||||||||||| ||||| ||||| || |||||||| | ||||||| | || Sbjct: 38622569 catcagttgcatattttcatttttgttctggccatcacacatgtgattttcagtgctctg 38622628 Query: 156 acaatgctt 164 || |||||| Sbjct: 38622629 actatgctt 38622637 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 490 agctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgttaatgg 542 ||||||||||||||| | ||||| |||| || ||| |||||||||||||||| Sbjct: 38623574 agctggtacttgtggatattcgttatgatattcctgctgctgaatgttaatgg 38623626 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Plus Query: 544 tggcacacatacttttggatcgcattcattcccctt 579 ||||||||||||||||||||| | ||| |||||||| Sbjct: 38623832 tggcacacatacttttggatctccttcgttcccctt 38623867
>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434C04 Length = 150064 Score = 58.0 bits (29), Expect = 3e-05 Identities = 64/73 (87%), Gaps = 2/73 (2%) Strand = Plus / Plus Query: 236 gcccaagaaggtgaacaatgtac-gcaatttcgaatttatcagggagcattttaagggta 294 |||||||||||||| | |||| | |||||| |||||||||||||| | |||||||||| Sbjct: 143655 gcccaagaaggtgacccatgtgcatcaattt-gaatttatcagggaacgctttaagggta 143713 Query: 295 ttggcaaagattc 307 ||||||||||||| Sbjct: 143714 ttggcaaagattc 143726 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 96 catcagttgcatattttcatatttgtgctggctattacacatgttgtattcagtgttttg 155 |||||||||||||||||||| ||||| ||||| || |||||||| | ||||||| | || Sbjct: 143250 catcagttgcatattttcatttttgttctggccatcacacatgtgattttcagtgctctg 143309 Query: 156 acaatgctt 164 || |||||| Sbjct: 143310 actatgctt 143318 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 490 agctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgttaatgg 542 ||||||||||||||| | ||||| |||| || ||| |||||||||||||||| Sbjct: 144255 agctggtacttgtggatattcgttatgatattcctgctgctgaatgttaatgg 144307 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Plus Query: 544 tggcacacatacttttggatcgcattcattcccctt 579 ||||||||||||||||||||| | ||| |||||||| Sbjct: 144513 tggcacacatacttttggatctccttcgttcccctt 144548
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 58.0 bits (29), Expect = 3e-05 Identities = 64/73 (87%), Gaps = 2/73 (2%) Strand = Plus / Plus Query: 236 gcccaagaaggtgaacaatgtac-gcaatttcgaatttatcagggagcattttaagggta 294 |||||||||||||| | |||| | |||||| |||||||||||||| | |||||||||| Sbjct: 80947 gcccaagaaggtgacccatgtgcatcaattt-gaatttatcagggaacgctttaagggta 81005 Query: 295 ttggcaaagattc 307 ||||||||||||| Sbjct: 81006 ttggcaaagattc 81018 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 96 catcagttgcatattttcatatttgtgctggctattacacatgttgtattcagtgttttg 155 |||||||||||||||||||| ||||| ||||| || |||||||| | ||||||| | || Sbjct: 80542 catcagttgcatattttcatttttgttctggccatcacacatgtgattttcagtgctctg 80601 Query: 156 acaatgctt 164 || |||||| Sbjct: 80602 actatgctt 80610 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 490 agctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgttaatgg 542 ||||||||||||||| | ||||| |||| || ||| |||||||||||||||| Sbjct: 81547 agctggtacttgtggatattcgttatgatattcctgctgctgaatgttaatgg 81599 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Plus Query: 544 tggcacacatacttttggatcgcattcattcccctt 579 ||||||||||||||||||||| | ||| |||||||| Sbjct: 81805 tggcacacatacttttggatctccttcgttcccctt 81840
>ref|NM_116494.3| Arabidopsis thaliana calmodulin binding AT4G02600 transcript variant AT4G02600.1 mRNA, complete cds Length = 1934 Score = 48.1 bits (24), Expect = 0.033 Identities = 51/60 (85%) Strand = Plus / Plus Query: 517 atctttctgttgctgaatgttaatgggtggcacacatacttttggatcgcattcattccc 576 |||||| || |||| |||||||| || ||||||||||| || ||||| ||||| |||||| Sbjct: 1001 atctttttgctgctaaatgttaacggatggcacacatatttctggatagcatttattccc 1060
>ref|NM_001036501.1| Arabidopsis thaliana calmodulin binding AT4G02600 transcript variant AT4G02600.2 mRNA, complete cds Length = 1942 Score = 48.1 bits (24), Expect = 0.033 Identities = 51/60 (85%) Strand = Plus / Plus Query: 517 atctttctgttgctgaatgttaatgggtggcacacatacttttggatcgcattcattccc 576 |||||| || |||| |||||||| || ||||||||||| || ||||| ||||| |||||| Sbjct: 996 atctttttgctgctaaatgttaacggatggcacacatatttctggatagcatttattccc 1055
>gb|BT009402.1| Triticum aestivum clone wlm96.pk046.j8:fis, full insert mRNA sequence Length = 1350 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 518 tctttctgttgctgaatgttaatgggtggcacacatactt 557 |||| ||| |||||||| | |||||||||||||||||||| Sbjct: 343 tcttcctgctgctgaatataaatgggtggcacacatactt 382
>gb|AY113992.1| Arabidopsis thaliana putative AtMlo-h1 protein (At4g02600) mRNA, complete cds Length = 1612 Score = 48.1 bits (24), Expect = 0.033 Identities = 51/60 (85%) Strand = Plus / Plus Query: 517 atctttctgttgctgaatgttaatgggtggcacacatacttttggatcgcattcattccc 576 |||||| || |||| |||||||| || ||||||||||| || ||||| ||||| |||||| Sbjct: 901 atctttttgctgctaaatgttaacggatggcacacatatttctggatagcatttattccc 960
>gb|AY072135.1| Arabidopsis thaliana putative AtMlo-h1 protein (At4g02600) mRNA, complete cds Length = 1950 Score = 48.1 bits (24), Expect = 0.033 Identities = 51/60 (85%) Strand = Plus / Plus Query: 517 atctttctgttgctgaatgttaatgggtggcacacatacttttggatcgcattcattccc 576 |||||| || |||| |||||||| || ||||||||||| || ||||| ||||| |||||| Sbjct: 1001 atctttttgctgctaaatgttaacggatggcacacatatttctggatagcatttattccc 1060
>emb|Z95352.1|ATMLOH1 A.thaliana AtMlo-h1 gene Length = 1880 Score = 48.1 bits (24), Expect = 0.033 Identities = 51/60 (85%) Strand = Plus / Plus Query: 517 atctttctgttgctgaatgttaatgggtggcacacatacttttggatcgcattcattccc 576 |||||| || |||| |||||||| || ||||||||||| || ||||| ||||| |||||| Sbjct: 993 atctttttgctgctaaatgttaacggatggcacacatatttctggatagcatttattccc 1052
>gb|DQ213959.1| Taeniopygia guttata clone 0061P0034H08 RAS-like estrogen-regulated growth inhibitor variant 2-like mRNA, complete sequence Length = 1058 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 ggaggatgccattcagaaaga 220 ||||||||||||||||||||| Sbjct: 455 ggaggatgccattcagaaaga 475
>ref|XM_464475.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1476 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 529 ctgaatgttaatgggtggcacacatactt 557 |||||| | |||||||||||||||||||| Sbjct: 812 ctgaatataaatgggtggcacacatactt 840
>ref|XM_472638.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1431 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 336 ttcaagcagttctatggatcagtaa 360 |||||||||||||||||||| |||| Sbjct: 676 ttcaagcagttctatggatcggtaa 700
>emb|BX677675.9| Zebrafish DNA sequence from clone DKEYP-90G12 in linkage group 2, complete sequence Length = 124301 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 cagtgttttgacaatgctttt 166 ||||||||||||||||||||| Sbjct: 66493 cagtgttttgacaatgctttt 66473
>emb|AL731606.2|OSJN00249 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058G03, complete sequence Length = 46422 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 ttcaagcagttctatggatcagtaa 360 |||||||||||||||||||| |||| Sbjct: 38014 ttcaagcagttctatggatcggtaa 37990
>gb|AC108162.4| Homo sapiens BAC clone RP11-686G17 from 4, complete sequence Length = 185624 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 197 gtgggaggatgccattcagaaagat 221 ||||||||||||||||| ||||||| Sbjct: 170432 gtgggaggatgccattctgaaagat 170408
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 ttcaagcagttctatggatcagtaa 360 |||||||||||||||||||| |||| Sbjct: 22139533 ttcaagcagttctatggatcggtaa 22139509
>dbj|AK066134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N01, full insert sequence Length = 1474 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 529 ctgaatgttaatgggtggcacacatactt 557 |||||| | |||||||||||||||||||| Sbjct: 811 ctgaatataaatgggtggcacacatactt 839
>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from chromosome 4, complete sequence Length = 90825 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 ttcaagcagttctatggatcagtaa 360 |||||||||||||||||||| |||| Sbjct: 64039 ttcaagcagttctatggatcggtaa 64015
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 ttcaagcagttctatggatcagtaa 360 |||||||||||||||||||| |||| Sbjct: 9394 ttcaagcagttctatggatcggtaa 9370
>emb|AL845488.7| Mouse DNA sequence from clone RP23-215P8 on chromosome 2, complete sequence Length = 153445 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 acatcagttgcatattttcat 115 ||||||||||||||||||||| Sbjct: 142740 acatcagttgcatattttcat 142720
>gb|AY599871.1| Physcomitrella patens MLO1 (Mlo1) mRNA, complete cds Length = 1895 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 96 catcagttgcatattttcatatttgtgctggctatt 131 |||||| | ||||||||||| |||||| |||||||| Sbjct: 455 catcagctccatattttcatttttgtgatggctatt 490
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 ggtgtctgccggtccaaggg 64 |||||||||||||||||||| Sbjct: 1886216 ggtgtctgccggtccaaggg 1886197
>gb|AC107786.14| Mus musculus chromosome 5, clone RP23-5E3, complete sequence Length = 226673 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 atattttcatatttgtgctg 125 |||||||||||||||||||| Sbjct: 62585 atattttcatatttgtgctg 62566
>gb|AC157933.4| Mus musculus chromosome 5, clone RP24-189N4, complete sequence Length = 185286 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 atattttcatatttgtgctg 125 |||||||||||||||||||| Sbjct: 6238 atattttcatatttgtgctg 6257
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete sequence Length = 787999 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 tggctgcattcgtttttcaa 340 |||||||||||||||||||| Sbjct: 680278 tggctgcattcgtttttcaa 680259
>gb|AC138320.12| Mus musculus chromosome 5, clone RP23-181I1, complete sequence Length = 230584 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 tgttttgacaatgcttttag 168 |||||||||||||||||||| Sbjct: 80320 tgttttgacaatgcttttag 80301
>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009C07, complete sequence Length = 148731 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gcggctgctcagcggcggcg 33 |||||||||||||||||||| Sbjct: 98839 gcggctgctcagcggcggcg 98820
>gb|AY812943.1| Schistosoma japonicum SJCHGC02634 protein mRNA, complete cds Length = 1401 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 atgttgtattcagtgttttg 155 |||||||||||||||||||| Sbjct: 1120 atgttgtattcagtgttttg 1139
>ref|XR_001840.1| PREDICTED: Mus musculus similar to retinoblastoma-binding protein 6 isoform 2 (LOC666160), mRNA Length = 2735 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 acatcaatggaaactgtggg 201 |||||||||||||||||||| Sbjct: 2611 acatcaatggaaactgtggg 2630
>ref|XR_004826.1| PREDICTED: Mus musculus similar to retinoblastoma-binding protein 6 isoform 2 (LOC675746), mRNA Length = 2735 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 acatcaatggaaactgtggg 201 |||||||||||||||||||| Sbjct: 2611 acatcaatggaaactgtggg 2630
>gb|AF128880.2| Sedimentibacter hydroxybenzoicus 4-hydroxybenzoate decarboxylase subunit C (shdC), 4-hydroxybenzoate decarboxylase subunit D (shdD), and 4-hydroxybenzoate decarboxylase subunit B (shdB) genes, complete cds Length = 5796 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 acatacttttggatcgcatt 569 |||||||||||||||||||| Sbjct: 4912 acatacttttggatcgcatt 4931
>gb|AC010692.4| Drosophila melanogaster 3L BAC RP98-11B23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179164 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 atacatcaatggaaactgtgggag 203 |||||||||| ||||||||||||| Sbjct: 39268 atacatcaatcgaaactgtgggag 39245
>emb|BX000690.46| Zebrafish DNA sequence from clone CH211-1C6, complete sequence Length = 182934 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 acatgttgtattcagtgttt 153 |||||||||||||||||||| Sbjct: 26569 acatgttgtattcagtgttt 26588
>ref|NM_169222.2| Drosophila melanogaster CG31462-PA (CG31462) mRNA, complete cds Length = 3159 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 ggcggctgctcagcggcggcgcgg 36 ||||||| |||||||||||||||| Sbjct: 803 ggcggctcctcagcggcggcgcgg 780
>gb|AC102341.10| Mus musculus chromosome 8, clone RP23-214E1, complete sequence Length = 187701 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 agatacatcaatggaaactg 197 |||||||||||||||||||| Sbjct: 157812 agatacatcaatggaaactg 157831
>dbj|AB102868.1| Salmonella typhimurium bacteriophage ST104 DNA, complete genome Length = 41391 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 cttggttttatcatgaccca 406 |||||||||||||||||||| Sbjct: 9484 cttggttttatcatgaccca 9465
>gb|AC097716.5| Homo sapiens BAC clone RP11-619J20 from 4, complete sequence Length = 127248 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 tgaaattcgatttccataaataca 445 ||||||| |||||||||||||||| Sbjct: 49595 tgaaattagatttccataaataca 49572
>gb|AC148340.3| Medicago truncatula chromosome 2 BAC clone mth2-22d10, complete sequence Length = 105618 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 aaagatacatcaatggaaac 195 |||||||||||||||||||| Sbjct: 51478 aaagatacatcaatggaaac 51459
>gb|AC012646.6|AC012646 Drosophila melanogaster, chromosome 3R, region 85A-85B, BAC clone BACR03F16, complete sequence Length = 204681 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 ggcggctgctcagcggcggcgcgg 36 ||||||| |||||||||||||||| Sbjct: 200212 ggcggctcctcagcggcggcgcgg 200189
>gb|AC009539.6|AC009539 Drosophila melanogaster, chromosome 3R, region 85A-85A, BAC clone BACR33N15, complete sequence Length = 187701 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 ggcggctgctcagcggcggcgcgg 36 ||||||| |||||||||||||||| Sbjct: 73649 ggcggctcctcagcggcggcgcgg 73626
>gb|AC008306.3|AC008306 Drosophila melanogaster, chromosome 2R, region 51B-51B, BAC clone BACR27M04, complete sequence Length = 169689 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 gttgcatattttcatatttgtgct 124 ||||||||||||||||||| |||| Sbjct: 108850 gttgcatattttcatatttttgct 108827
>gb|AC018900.8|AC018900 Homo sapiens chromosome 15 clone RP11-198M11 map 15q21.1, complete sequence Length = 177657 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 513 ggtgatctttctgttgctgaatgt 536 |||| ||||||||||||||||||| Sbjct: 70933 ggtgttctttctgttgctgaatgt 70956
>gb|AC078847.2|AC078847 Homo sapiens chromosome 7 clone RP11-3M15, complete sequence Length = 170919 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 aggtggttgggataagctgg 495 |||||||||||||||||||| Sbjct: 55074 aggtggttgggataagctgg 55055
>gb|AY029318.1| Zea mays seven transmembrane protein Mlo7 mRNA, complete cds Length = 1660 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 94 tacatcagttgcatattttcatatttgt 121 |||||||| |||| |||||||||||||| Sbjct: 410 tacatcagctgcacattttcatatttgt 437
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 gcggctgctcagcggcggcgcggc 37 |||||||| ||||||||||||||| Sbjct: 2957682 gcggctgcgcagcggcggcgcggc 2957659
>gb|AC009276.9|AC009276 Homo sapiens chromosome 7 clone RP11-239G19, complete sequence Length = 163631 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 aggtggttgggataagctgg 495 |||||||||||||||||||| Sbjct: 23476 aggtggttgggataagctgg 23495
>gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, complete cds Length = 1013 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cggctgctcagcggcggcgc 34 |||||||||||||||||||| Sbjct: 133 cggctgctcagcggcggcgc 114
>emb|BX005271.9| Zebrafish DNA sequence from clone CH211-145F15 in linkage group 5, complete sequence Length = 162019 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 ttgcatattttcatatttgt 121 |||||||||||||||||||| Sbjct: 40831 ttgcatattttcatatttgt 40812
>emb|AL391158.5|CNS06C83 Human chromosome 14 DNA sequence BAC R-560O13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 202792 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 ttgcatattttcatatttgt 121 |||||||||||||||||||| Sbjct: 46251 ttgcatattttcatatttgt 46270
>gb|AE003678.3| Drosophila melanogaster chromosome 3R, section 16 of 118 of the complete sequence Length = 244757 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 ggcggctgctcagcggcggcgcgg 36 ||||||| |||||||||||||||| Sbjct: 188232 ggcggctcctcagcggcggcgcgg 188255
>gb|AE003814.3| Drosophila melanogaster chromosome 2R, section 36 of 73 of the complete sequence Length = 254438 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 gttgcatattttcatatttgtgct 124 ||||||||||||||||||| |||| Sbjct: 213124 gttgcatattttcatatttttgct 213101
>gb|AE003533.4| Drosophila melanogaster chromosome 3L, section 52 of 83 of the complete sequence Length = 289141 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 atacatcaatggaaactgtgggag 203 |||||||||| ||||||||||||| Sbjct: 108222 atacatcaatcgaaactgtgggag 108245
>dbj|AP001972.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2562J17, complete sequences Length = 215225 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 agaaggtggttgggataagctggt 496 ||||||||| |||||||||||||| Sbjct: 19667 agaaggtgggtgggataagctggt 19690
>gb|AC151909.5| Mus musculus BAC clone RP23-60H14 from chromosome 8, complete sequence Length = 208855 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 agatacatcaatggaaactg 197 |||||||||||||||||||| Sbjct: 97685 agatacatcaatggaaactg 97704
>emb|BX469893.9| Zebrafish DNA sequence from clone DKEY-252H13 in linkage group 5, complete sequence Length = 159139 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 ttgcatattttcatatttgt 121 |||||||||||||||||||| Sbjct: 7031 ttgcatattttcatatttgt 7012
>gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, complete cds Length = 1056 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cggctgctcagcggcggcgc 34 |||||||||||||||||||| Sbjct: 165 cggctgctcagcggcggcgc 146 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,448,875 Number of Sequences: 3902068 Number of extensions: 5448875 Number of successful extensions: 103180 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102783 Number of HSP's gapped (non-prelim): 381 length of query: 588 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 565 effective length of database: 17,143,297,704 effective search space: 9685963202760 effective search space used: 9685963202760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)