ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2b18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY029319.1| Zea mays seven transmembrane protein Mlo8 mRNA, c... 394 e-106
2gb|AY104078.1| Zea mays PCO070411 mRNA sequence 394 e-106
3dbj|AK121347.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 3e-67
4ref|NM_190204.1| Oryza sativa (japonica cultivar-group), predic... 250 4e-63
5dbj|AK121374.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 4e-63
6dbj|AB011444.1| Triticum aestivum WESR3 mRNA, partial cds 198 1e-47
7dbj|AK072733.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
8gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome... 98 4e-17
9gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome... 98 4e-17
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
11dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
12dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
13dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
14ref|NM_116494.3| Arabidopsis thaliana calmodulin binding AT4G026... 48 0.033
15ref|NM_001036501.1| Arabidopsis thaliana calmodulin binding AT4G... 48 0.033
16gb|BT009402.1| Triticum aestivum clone wlm96.pk046.j8:fis, full ... 48 0.033
17gb|AY113992.1| Arabidopsis thaliana putative AtMlo-h1 protein (A... 48 0.033
18gb|AY072135.1| Arabidopsis thaliana putative AtMlo-h1 protein (A... 48 0.033
19emb|Z95352.1|ATMLOH1 A.thaliana AtMlo-h1 gene 48 0.033
20gb|DQ213959.1| Taeniopygia guttata clone 0061P0034H08 RAS-like e... 42 2.0
21ref|XM_464475.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.0
22ref|XM_472638.1| Oryza sativa (japonica cultivar-group), predic... 42 2.0
23emb|BX677675.9| Zebrafish DNA sequence from clone DKEYP-90G12 in... 42 2.0
24emb|AL731606.2|OSJN00249 Oryza sativa genomic DNA, chromosome 4,... 42 2.0
25gb|AC108162.4| Homo sapiens BAC clone RP11-686G17 from 4, comple... 42 2.0
26dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
27dbj|AK066134.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
28gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone ... 42 2.0
29emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4,... 42 2.0
30emb|AL845488.7| Mouse DNA sequence from clone RP23-215P8 on chro... 42 2.0
31gb|AY599871.1| Physcomitrella patens MLO1 (Mlo1) mRNA, complete cds 40 8.0
32gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 8.0
33gb|AC107786.14| Mus musculus chromosome 5, clone RP23-5E3, compl... 40 8.0
34gb|AC157933.4| Mus musculus chromosome 5, clone RP24-189N4, comp... 40 8.0
35gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.0
36gb|AC138320.12| Mus musculus chromosome 5, clone RP23-181I1, com... 40 8.0
37gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.0
38gb|AY812943.1| Schistosoma japonicum SJCHGC02634 protein mRNA, c... 40 8.0
39ref|XR_001840.1| PREDICTED: Mus musculus similar to retinoblasto... 40 8.0
40ref|XR_004826.1| PREDICTED: Mus musculus similar to retinoblasto... 40 8.0
41gb|AF128880.2| Sedimentibacter hydroxybenzoicus 4-hydroxybenzoat... 40 8.0
42gb|AC010692.4| Drosophila melanogaster 3L BAC RP98-11B23 (Roswel... 40 8.0
43emb|BX000690.46| Zebrafish DNA sequence from clone CH211-1C6, co... 40 8.0
44ref|NM_169222.2| Drosophila melanogaster CG31462-PA (CG31462) mR... 40 8.0
45gb|AC102341.10| Mus musculus chromosome 8, clone RP23-214E1, com... 40 8.0
46dbj|AB102868.1| Salmonella typhimurium bacteriophage ST104 DNA, ... 40 8.0
47gb|AC097716.5| Homo sapiens BAC clone RP11-619J20 from 4, comple... 40 8.0
48gb|AC148340.3| Medicago truncatula chromosome 2 BAC clone mth2-2... 40 8.0
49gb|AC012646.6|AC012646 Drosophila melanogaster, chromosome 3R, r... 40 8.0
50gb|AC009539.6|AC009539 Drosophila melanogaster, chromosome 3R, r... 40 8.0
51gb|AC008306.3|AC008306 Drosophila melanogaster, chromosome 2R, r... 40 8.0
52gb|AC018900.8|AC018900 Homo sapiens chromosome 15 clone RP11-198... 40 8.0
53gb|AC078847.2|AC078847 Homo sapiens chromosome 7 clone RP11-3M15... 40 8.0
54gb|AY029318.1| Zea mays seven transmembrane protein Mlo7 mRNA, c... 40 8.0
55gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 8.0
56gb|AC009276.9|AC009276 Homo sapiens chromosome 7 clone RP11-239G... 40 8.0
57gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, com... 40 8.0
58emb|BX005271.9| Zebrafish DNA sequence from clone CH211-145F15 i... 40 8.0
59emb|AL391158.5|CNS06C83 Human chromosome 14 DNA sequence BAC R-5... 40 8.0
60gb|AE003678.3| Drosophila melanogaster chromosome 3R, section 16... 40 8.0
61gb|AE003814.3| Drosophila melanogaster chromosome 2R, section 36... 40 8.0
62gb|AE003533.4| Drosophila melanogaster chromosome 3L, section 52... 40 8.0
63dbj|AP001972.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.0
64gb|AC151909.5| Mus musculus BAC clone RP23-60H14 from chromosome... 40 8.0
65emb|BX469893.9| Zebrafish DNA sequence from clone DKEY-252H13 in... 40 8.0
66gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, complete cds 40 8.0

>gb|AY029319.1| Zea mays seven transmembrane protein Mlo8 mRNA, complete cds
          Length = 1798

 Score =  394 bits (199), Expect = e-106
 Identities = 433/509 (85%), Gaps = 4/509 (0%)
 Strand = Plus / Plus

                                                                        
Query: 79   tgtccctcgaagctatacatcagttgcatattttcatatttgtgctggctattacacatg 138
            ||||||| ||||| ||||||||| |||| |||||||||||||| ||||| || |||||||
Sbjct: 500  tgtcccttgaagccatacatcagctgcacattttcatatttgttctggcaatcacacatg 559

                                                                        
Query: 139  ttgtattcagtgttttgacaatgcttttaggaggggcaaagatacatcaatggaaactgt 198
            || | ||||| ||    || |||||||||||||| ||| ||||||| |||||||||| ||
Sbjct: 560  ttattttcagcgtcacaactatgcttttaggaggtgcacagatacaccaatggaaacagt 619

                                                                        
Query: 199  gggaggatgccattcagaaagatactgcaggaaatgggcccaagaaggtgaacaatgtac 258
            ||||| |||  ||| | |||||| || | ||||||||||| |||   || | ||||||||
Sbjct: 620  gggagaatggaattaaaaaagatgctcctggaaatgggcctaag---gtaaccaatgtac 676

                                                                        
Query: 259  gcaatttcgaatttatcagggagcattttaagggtattggcaaagattctagaatattga 318
               ||   |||||||||| | | | |||||||||||||||||||||||||| ||||||||
Sbjct: 677  atcatcatgaatttatcaagaaacgttttaagggtattggcaaagattctataatattga 736

                                                                        
Query: 319  gttggctgcattcgtttttcaagcagttctatggatcagtaagtaaaaccgactacacca 378
            ||||||||||||| |||   |||||||| ||| ||||||||  |||| | || |||||||
Sbjct: 737  gttggctgcattcttttggtaagcagttttatagatcagtatctaaatcagattacacca 796

                                                                        
Query: 379  caatgcgtcttggttttatcatgacccacttgccgtggaaacctgaaattcgatttccat 438
            ||||||||||||||||||||||||| |||| ||| |||||| |  ||||| |||||||||
Sbjct: 797  caatgcgtcttggttttatcatgactcact-gccctggaaatccaaaatttgatttccat 855

                                                                        
Query: 439  aaatacatgctgcgggttttagagtctgattttaagaaggtggttgggataagctggtac 498
            | ||||||| |  ||||||||||| | ||||||||||| ||||| || ||||||||||||
Sbjct: 856  agatacatggtaagggttttagaggcggattttaagaaagtggtaggcataagctggtac 915

                                                                        
Query: 499  ttgtgggtcttcgtggtgatctttctgttgctgaatgttaatgggtggcacacatacttt 558
            |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 916  ttgtgggtcttcgtggtgatatttctgttgctgaatgttaatggctggcacacatacttt 975

                                         
Query: 559  tggatcgcattcattccccttattcttct 587
            ||||| || ||| ||||||||||||||||
Sbjct: 976  tggattgctttccttccccttattcttct 1004



to top

>gb|AY104078.1| Zea mays PCO070411 mRNA sequence
          Length = 1798

 Score =  394 bits (199), Expect = e-106
 Identities = 433/509 (85%), Gaps = 4/509 (0%)
 Strand = Plus / Plus

                                                                        
Query: 79   tgtccctcgaagctatacatcagttgcatattttcatatttgtgctggctattacacatg 138
            ||||||| ||||| ||||||||| |||| |||||||||||||| ||||| || |||||||
Sbjct: 500  tgtcccttgaagccatacatcagctgcacattttcatatttgttctggcaatcacacatg 559

                                                                        
Query: 139  ttgtattcagtgttttgacaatgcttttaggaggggcaaagatacatcaatggaaactgt 198
            || | ||||| ||    || |||||||||||||| ||| ||||||| |||||||||| ||
Sbjct: 560  ttattttcagcgtcacaactatgcttttaggaggtgcacagatacaccaatggaaacagt 619

                                                                        
Query: 199  gggaggatgccattcagaaagatactgcaggaaatgggcccaagaaggtgaacaatgtac 258
            ||||| |||  ||| | |||||| || | ||||||||||| |||   || | ||||||||
Sbjct: 620  gggagaatggaattaaaaaagatgctcctggaaatgggcctaag---gtaaccaatgtac 676

                                                                        
Query: 259  gcaatttcgaatttatcagggagcattttaagggtattggcaaagattctagaatattga 318
               ||   |||||||||| | | | |||||||||||||||||||||||||| ||||||||
Sbjct: 677  atcatcatgaatttatcaagaaacgttttaagggtattggcaaagattctataatattga 736

                                                                        
Query: 319  gttggctgcattcgtttttcaagcagttctatggatcagtaagtaaaaccgactacacca 378
            ||||||||||||| |||   |||||||| ||| ||||||||  |||| | || |||||||
Sbjct: 737  gttggctgcattcttttggtaagcagttttatagatcagtatctaaatcagattacacca 796

                                                                        
Query: 379  caatgcgtcttggttttatcatgacccacttgccgtggaaacctgaaattcgatttccat 438
            ||||||||||||||||||||||||| |||| ||| |||||| |  ||||| |||||||||
Sbjct: 797  caatgcgtcttggttttatcatgactcact-gccctggaaatccaaaatttgatttccat 855

                                                                        
Query: 439  aaatacatgctgcgggttttagagtctgattttaagaaggtggttgggataagctggtac 498
            | ||||||| |  ||||||||||| | ||||||||||| ||||| || ||||||||||||
Sbjct: 856  agatacatggtaagggttttagaggcggattttaagaaagtggtaggcataagctggtac 915

                                                                        
Query: 499  ttgtgggtcttcgtggtgatctttctgttgctgaatgttaatgggtggcacacatacttt 558
            |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 916  ttgtgggtcttcgtggtgatatttctgttgctgaatgttaatggctggcacacatacttt 975

                                         
Query: 559  tggatcgcattcattccccttattcttct 587
            ||||| || ||| ||||||||||||||||
Sbjct: 976  tggattgctttccttccccttattcttct 1004



to top

>dbj|AK121347.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121J07, full
            insert sequence
          Length = 2921

 Score =  264 bits (133), Expect = 3e-67
 Identities = 275/321 (85%), Gaps = 1/321 (0%)
 Strand = Plus / Plus

                                                                        
Query: 267  gaatttatcagggagcattttaagggtattggcaaagattctagaatattgagttggctg 326
            ||||||||||  || ||||||||||| || |||||||| |||| ||||||||||||||||
Sbjct: 1563 gaatttatcaatgatcattttaagggcatgggcaaagactctaaaatattgagttggctg 1622

                                                                        
Query: 327  cattcgtttttcaagcagttctatggatcagtaagtaaaaccgactacaccacaatgcgt 386
            ||||| ||| | |||||||| |||||||||||   |||| | || || || |||||||||
Sbjct: 1623 cattcttttgttaagcagttttatggatcagtttctaaatcggattatacaacaatgcgt 1682

                                                                        
Query: 387  cttggttttatcatgacccacttgccgtggaaacctgaaattcgatttccataaatacat 446
            ||||| ||||||||||| || ||| ||||||||||  ||||| |||||||||||||||||
Sbjct: 1683 cttggctttatcatgactca-ttgtcgtggaaacccaaaatttgatttccataaatacat 1741

                                                                        
Query: 447  gctgcgggttttagagtctgattttaagaaggtggttgggataagctggtacttgtgggt 506
            | || |||| ||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 1742 gatgagggtcttagagtctgactttaagaaagtggttggcataagctggtacttgtgggt 1801

                                                                        
Query: 507  cttcgtggtgatctttctgttgctgaatgttaatgggtggcacacatacttttggatcgc 566
             || || |||||||| || ||||||||||| || || |||||||| ||||||||||| ||
Sbjct: 1802 ttttgttgtgatcttcctcttgctgaatgtcaacggttggcacacgtacttttggattgc 1861

                                 
Query: 567  attcattccccttattcttct 587
             ||  ||||||| ||||||||
Sbjct: 1862 ttttcttcccctaattcttct 1882



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 82/93 (88%)
 Strand = Plus / Plus

                                                                        
Query: 61   agggaaaagctccgttgatgtccctcgaagctatacatcagttgcatattttcatatttg 120
            |||| |||| ||| ||| ||||||| ||||| |||||||| |||||||||||||||||||
Sbjct: 1093 aggggaaagttccattgctgtcccttgaagccatacatcaattgcatattttcatatttg 1152

                                             
Query: 121  tgctggctattacacatgttgtattcagtgttt 153
            | |||||||| ||||||||| | ||||||||||
Sbjct: 1153 ttctggctatcacacatgttattttcagtgttt 1185



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 178  agatacatcaatggaaactgtgggaggatgccattcagaaagat 221
            ||||||| ||||||||||  ||||||| ||  ||||||||||||
Sbjct: 1306 agatacaccaatggaaacaatgggaggttgaaattcagaaagat 1349



to top

>ref|NM_190204.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1509

 Score =  250 bits (126), Expect = 4e-63
 Identities = 426/522 (81%), Gaps = 3/522 (0%)
 Strand = Plus / Plus

                                                                       
Query: 59  caagggaaaagctccgttgatgtccctcgaagctatacatcagttgcatattttcatatt 118
           ||||||||| | ||| ||| |||| || |||||  | |||||||||||||||||||| ||
Sbjct: 414 caagggaaaggttcctttgctgtcacttgaagcactccatcagttgcatattttcatttt 473

                                                                       
Query: 119 tgtgctggctattacacatgttgtattcagtgttttgacaatgcttttaggaggggcaaa 178
           ||| ||||| || ||||||||  | ||||||| | |||| |||||| | ||||| || ||
Sbjct: 474 tgttctggccatcacacatgtgattttcagtgctctgactatgcttcttggaggagcgaa 533

                                                                       
Query: 179 gatacatcaatggaaactgtgggaggatgccattcagaaagatactgcaggaaatgggcc 238
           ||| |||||||||||||  |||||  ||| ||| |||||||||  |||   ||||| |||
Sbjct: 534 gattcatcaatggaaacactgggaaaatgacatccagaaagatgttgctcaaaatgcgcc 593

                                                                       
Query: 239 caagaaggtgaacaatgtacg-caatttcgaatttatcagggagcattttaagggtattg 297
           ||||||||||| | |||| |  |||||| |||||||||||||| |  |||||||||||||
Sbjct: 594 caagaaggtgacccatgtgcatcaattt-gaatttatcagggaacgctttaagggtattg 652

                                                                       
Query: 298 gcaaagattctagaatattgagttggctgcattcgtttttcaagcagttctatggatcag 357
           |||||||||| | |||| | || ||||||||||| ||| | |||||||| | ||| ||||
Sbjct: 653 gcaaagattccataatactaagctggctgcattcttttgttaagcagttttctgggtcag 712

                                                                       
Query: 358 taagtaaaaccgactacaccacaatgcgtcttggttttatcatgacccacttgccgtgga 417
           | | |||| | |||||||  |||||||| ||||| ||||||  ||| || ||||||||  
Sbjct: 713 ttactaaatcagactacataacaatgcgacttggatttatccagacaca-ttgccgtgcg 771

                                                                       
Query: 418 aacctgaaattcgatttccataaatacatgctgcgggttttagagtctgattttaagaag 477
           ||||  || ||||||||||| | ||||||| | || | ||| ||  | ||||||||||| 
Sbjct: 772 aacccaaagttcgatttccacagatacatggtacgagctttggaagcagattttaagaaa 831

                                                                       
Query: 478 gtggttgggataagctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgtt 537
           |||||||| |||||||||||||||||| | |||||  |||| || ||| |||||||||||
Sbjct: 832 gtggttggtataagctggtacttgtggatattcgttatgatattcctgctgctgaatgtt 891

                                                     
Query: 538 aatgggtggcacacatacttttggatcgcattcattcccctt 579
           ||||| ||||||||||||||||||||| | ||| ||||||||
Sbjct: 892 aatggttggcacacatacttttggatctccttcgttcccctt 933



to top

>dbj|AK121374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C14, full
            insert sequence
          Length = 2115

 Score =  250 bits (126), Expect = 4e-63
 Identities = 426/522 (81%), Gaps = 3/522 (0%)
 Strand = Plus / Plus

                                                                        
Query: 59   caagggaaaagctccgttgatgtccctcgaagctatacatcagttgcatattttcatatt 118
            ||||||||| | ||| ||| |||| || |||||  | |||||||||||||||||||| ||
Sbjct: 674  caagggaaaggttcctttgctgtcacttgaagcactccatcagttgcatattttcatttt 733

                                                                        
Query: 119  tgtgctggctattacacatgttgtattcagtgttttgacaatgcttttaggaggggcaaa 178
            ||| ||||| || ||||||||  | ||||||| | |||| |||||| | ||||| || ||
Sbjct: 734  tgttctggccatcacacatgtgattttcagtgctctgactatgcttcttggaggagcgaa 793

                                                                        
Query: 179  gatacatcaatggaaactgtgggaggatgccattcagaaagatactgcaggaaatgggcc 238
            ||| |||||||||||||  |||||  ||| ||| |||||||||  |||   ||||| |||
Sbjct: 794  gattcatcaatggaaacactgggaaaatgacatccagaaagatgttgctcaaaatgcgcc 853

                                                                        
Query: 239  caagaaggtgaacaatgtacg-caatttcgaatttatcagggagcattttaagggtattg 297
            ||||||||||| | |||| |  |||||| |||||||||||||| |  |||||||||||||
Sbjct: 854  caagaaggtgacccatgtgcatcaattt-gaatttatcagggaacgctttaagggtattg 912

                                                                        
Query: 298  gcaaagattctagaatattgagttggctgcattcgtttttcaagcagttctatggatcag 357
            |||||||||| | |||| | || ||||||||||| ||| | |||||||| | ||| ||||
Sbjct: 913  gcaaagattccataatactaagctggctgcattcttttgttaagcagttttctgggtcag 972

                                                                        
Query: 358  taagtaaaaccgactacaccacaatgcgtcttggttttatcatgacccacttgccgtgga 417
            | | |||| | |||||||  |||||||| ||||| ||||||  ||| || ||||||||  
Sbjct: 973  ttactaaatcagactacataacaatgcgacttggatttatccagacaca-ttgccgtgcg 1031

                                                                        
Query: 418  aacctgaaattcgatttccataaatacatgctgcgggttttagagtctgattttaagaag 477
            ||||  || ||||||||||| | ||||||| | || | ||| ||  | ||||||||||| 
Sbjct: 1032 aacccaaagttcgatttccacagatacatggtacgagctttggaagcagattttaagaaa 1091

                                                                        
Query: 478  gtggttgggataagctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgtt 537
            |||||||| |||||||||||||||||| | |||||  |||| || ||| |||||||||||
Sbjct: 1092 gtggttggtataagctggtacttgtggatattcgttatgatattcctgctgctgaatgtt 1151

                                                      
Query: 538  aatgggtggcacacatacttttggatcgcattcattcccctt 579
            ||||| ||||||||||||||||||||| | ||| ||||||||
Sbjct: 1152 aatggttggcacacatacttttggatctccttcgttcccctt 1193



to top

>dbj|AB011444.1| Triticum aestivum WESR3 mRNA, partial cds
          Length = 310

 Score =  198 bits (100), Expect = 1e-47
 Identities = 103/104 (99%)
 Strand = Plus / Plus

                                                                       
Query: 484 gggataagctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgttaatggg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   gggataagctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgttaatggg 61

                                                       
Query: 544 tggcacacatacttttggatcgcattcattccccttattcttct 587
           |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 62  tggcacacatacttttggattgcattcattccccttattcttct 105



to top

>dbj|AK072733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141N06, full
           insert sequence
          Length = 1089

 Score =  184 bits (93), Expect = 2e-43
 Identities = 259/313 (82%), Gaps = 1/313 (0%)
 Strand = Plus / Plus

                                                                       
Query: 267 gaatttatcagggagcattttaagggtattggcaaagattctagaatattgagttggctg 326
           |||||||||||||| |  ||||||||||||||||||||||| | |||| | || ||||||
Sbjct: 27  gaatttatcagggaacgctttaagggtattggcaaagattccataatactaagctggctg 86

                                                                       
Query: 327 cattcgtttttcaagcagttctatggatcagtaagtaaaaccgactacaccacaatgcgt 386
           ||||| ||| | |||||||| | ||| ||||| | |||| | |||||||  |||||||| 
Sbjct: 87  cattcttttgttaagcagttttctgggtcagttactaaatcagactacataacaatgcga 146

                                                                       
Query: 387 cttggttttatcatgacccacttgccgtggaaacctgaaattcgatttccataaatacat 446
           ||||| ||||||  ||| || ||||||||  ||||  || ||||||||||| | ||||||
Sbjct: 147 cttggatttatccagacaca-ttgccgtgcgaacccaaagttcgatttccacagatacat 205

                                                                       
Query: 447 gctgcgggttttagagtctgattttaagaaggtggttgggataagctggtacttgtgggt 506
           | | || | ||| ||  | ||||||||||| |||||||| |||||||||||||||||| |
Sbjct: 206 ggtacgagctttggaagcagattttaagaaagtggttggtataagctggtacttgtggat 265

                                                                       
Query: 507 cttcgtggtgatctttctgttgctgaatgttaatgggtggcacacatacttttggatcgc 566
            |||||  |||| || ||| |||||||||||||||| ||||||||||||||||||||| |
Sbjct: 266 attcgttatgatattcctgctgctgaatgttaatggttggcacacatacttttggatctc 325

                        
Query: 567 attcattcccctt 579
            ||| ||||||||
Sbjct: 326 cttcgttcccctt 338



to top

>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01,
             complete sequence
          Length = 173074

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 82/93 (88%)
 Strand = Plus / Minus

                                                                         
Query: 61    agggaaaagctccgttgatgtccctcgaagctatacatcagttgcatattttcatatttg 120
             |||| |||| ||| ||| ||||||| ||||| |||||||| |||||||||||||||||||
Sbjct: 15772 aggggaaagttccattgctgtcccttgaagccatacatcaattgcatattttcatatttg 15713

                                              
Query: 121   tgctggctattacacatgttgtattcagtgttt 153
             | |||||||| ||||||||| | ||||||||||
Sbjct: 15712 ttctggctatcacacatgttattttcagtgttt 15680



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                         
Query: 412   cgtggaaacctgaaattcgatttccataaatacatgctgcgggttttagagtctgatttt 471
             ||||||||||  ||||| |||||||||||||||||| || |||| ||||||||||| |||
Sbjct: 14893 cgtggaaacccaaaatttgatttccataaatacatgatgagggtcttagagtctgacttt 14834

                                 
Query: 472   aagaaggtggttgggataag 491
             ||||| |||||||| |||||
Sbjct: 14833 aagaaagtggttggcataag 14814



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                         
Query: 267   gaatttatcagggagcattttaagggtattggcaaagattctagaatattgagttggctg 326
             ||||||||||  || ||||||||||| || |||||||| |||| ||||||||||||||||
Sbjct: 15302 gaatttatcaatgatcattttaagggcatgggcaaagactctaaaatattgagttggctg 15243



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 490   agctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgt 536
             ||||||||||||||||| || || |||||||| || |||||||||||
Sbjct: 14705 agctggtacttgtgggtttttgttgtgatcttcctcttgctgaatgt 14659



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                         
Query: 326   gcattcgtttttcaagcagttctatggatcagtaagtaaaaccgactacaccacaatgcg 385
             |||||| ||| | |||||||| |||||||||||   |||| | || || || ||||||||
Sbjct: 15053 gcattcttttgttaagcagttttatggatcagtttctaaatcggattatacaacaatgcg 14994

                             
Query: 386   tcttggttttatcatg 401
             |||||| |||||||||
Sbjct: 14993 tcttggctttatcatg 14978



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 178   agatacatcaatggaaactgtgggaggatgccattcagaaagat 221
             ||||||| ||||||||||  ||||||| ||  ||||||||||||
Sbjct: 15559 agatacaccaatggaaacaatgggaggttgaaattcagaaagat 15516



to top

>gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0579A05,
             complete sequence
          Length = 107407

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 82/93 (88%)
 Strand = Plus / Minus

                                                                         
Query: 61    agggaaaagctccgttgatgtccctcgaagctatacatcagttgcatattttcatatttg 120
             |||| |||| ||| ||| ||||||| ||||| |||||||| |||||||||||||||||||
Sbjct: 77617 aggggaaagttccattgctgtcccttgaagccatacatcaattgcatattttcatatttg 77558

                                              
Query: 121   tgctggctattacacatgttgtattcagtgttt 153
             | |||||||| ||||||||| | ||||||||||
Sbjct: 77557 ttctggctatcacacatgttattttcagtgttt 77525



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                         
Query: 412   cgtggaaacctgaaattcgatttccataaatacatgctgcgggttttagagtctgatttt 471
             ||||||||||  ||||| |||||||||||||||||| || |||| ||||||||||| |||
Sbjct: 76738 cgtggaaacccaaaatttgatttccataaatacatgatgagggtcttagagtctgacttt 76679

                                 
Query: 472   aagaaggtggttgggataag 491
             ||||| |||||||| |||||
Sbjct: 76678 aagaaagtggttggcataag 76659



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                         
Query: 267   gaatttatcagggagcattttaagggtattggcaaagattctagaatattgagttggctg 326
             ||||||||||  || ||||||||||| || |||||||| |||| ||||||||||||||||
Sbjct: 77147 gaatttatcaatgatcattttaagggcatgggcaaagactctaaaatattgagttggctg 77088



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 490   agctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgt 536
             ||||||||||||||||| || || |||||||| || |||||||||||
Sbjct: 76550 agctggtacttgtgggtttttgttgtgatcttcctcttgctgaatgt 76504



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                         
Query: 326   gcattcgtttttcaagcagttctatggatcagtaagtaaaaccgactacaccacaatgcg 385
             |||||| ||| | |||||||| |||||||||||   |||| | || || || ||||||||
Sbjct: 76898 gcattcttttgttaagcagttttatggatcagtttctaaatcggattatacaacaatgcg 76839

                             
Query: 386   tcttggttttatcatg 401
             |||||| |||||||||
Sbjct: 76838 tcttggctttatcatg 76823



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 178   agatacatcaatggaaactgtgggaggatgccattcagaaagat 221
             ||||||| ||||||||||  ||||||| ||  ||||||||||||
Sbjct: 77404 agatacaccaatggaaacaatgggaggttgaaattcagaaagat 77361



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 82/93 (88%)
 Strand = Plus / Minus

                                                                            
Query: 61       agggaaaagctccgttgatgtccctcgaagctatacatcagttgcatattttcatatttg 120
                |||| |||| ||| ||| ||||||| ||||| |||||||| |||||||||||||||||||
Sbjct: 20344027 aggggaaagttccattgctgtcccttgaagccatacatcaattgcatattttcatatttg 20343968

                                                 
Query: 121      tgctggctattacacatgttgtattcagtgttt 153
                | |||||||| ||||||||| | ||||||||||
Sbjct: 20343967 ttctggctatcacacatgttattttcagtgttt 20343935



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                            
Query: 412      cgtggaaacctgaaattcgatttccataaatacatgctgcgggttttagagtctgatttt 471
                ||||||||||  ||||| |||||||||||||||||| || |||| ||||||||||| |||
Sbjct: 20343148 cgtggaaacccaaaatttgatttccataaatacatgatgagggtcttagagtctgacttt 20343089

                                    
Query: 472      aagaaggtggttgggataag 491
                ||||| |||||||| |||||
Sbjct: 20343088 aagaaagtggttggcataag 20343069



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                            
Query: 267      gaatttatcagggagcattttaagggtattggcaaagattctagaatattgagttggctg 326
                ||||||||||  || ||||||||||| || |||||||| |||| ||||||||||||||||
Sbjct: 20343557 gaatttatcaatgatcattttaagggcatgggcaaagactctaaaatattgagttggctg 20343498



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 490      agctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgt 536
                ||||||||||||||||| || || |||||||| || |||||||||||
Sbjct: 20342960 agctggtacttgtgggtttttgttgtgatcttcctcttgctgaatgt 20342914



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                            
Query: 326      gcattcgtttttcaagcagttctatggatcagtaagtaaaaccgactacaccacaatgcg 385
                |||||| ||| | |||||||| |||||||||||   |||| | || || || ||||||||
Sbjct: 20343308 gcattcttttgttaagcagttttatggatcagtttctaaatcggattatacaacaatgcg 20343249

                                
Query: 386      tcttggttttatcatg 401
                |||||| |||||||||
Sbjct: 20343248 tcttggctttatcatg 20343233



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 14       gcggctgctcagcggcggcg 33
                ||||||||||||||||||||
Sbjct: 28944546 gcggctgctcagcggcggcg 28944527



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                            
Query: 178      agatacatcaatggaaactgtgggaggatgccattcagaaagat 221
                ||||||| ||||||||||  ||||||| ||  ||||||||||||
Sbjct: 20343814 agatacaccaatggaaacaatgggaggttgaaattcagaaagat 20343771



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 64/73 (87%), Gaps = 2/73 (2%)
 Strand = Plus / Plus

                                                                            
Query: 236      gcccaagaaggtgaacaatgtac-gcaatttcgaatttatcagggagcattttaagggta 294
                |||||||||||||| | |||| |  |||||| |||||||||||||| |  ||||||||||
Sbjct: 38622974 gcccaagaaggtgacccatgtgcatcaattt-gaatttatcagggaacgctttaagggta 38623032

                             
Query: 295      ttggcaaagattc 307
                |||||||||||||
Sbjct: 38623033 ttggcaaagattc 38623045



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                            
Query: 96       catcagttgcatattttcatatttgtgctggctattacacatgttgtattcagtgttttg 155
                |||||||||||||||||||| ||||| ||||| || ||||||||  | ||||||| | ||
Sbjct: 38622569 catcagttgcatattttcatttttgttctggccatcacacatgtgattttcagtgctctg 38622628

                         
Query: 156      acaatgctt 164
                || ||||||
Sbjct: 38622629 actatgctt 38622637



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                     
Query: 490      agctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgttaatgg 542
                ||||||||||||||| | |||||  |||| || ||| ||||||||||||||||
Sbjct: 38623574 agctggtacttgtggatattcgttatgatattcctgctgctgaatgttaatgg 38623626



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 544      tggcacacatacttttggatcgcattcattcccctt 579
                ||||||||||||||||||||| | ||| ||||||||
Sbjct: 38623832 tggcacacatacttttggatctccttcgttcccctt 38623867



to top

>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0434C04
          Length = 150064

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 64/73 (87%), Gaps = 2/73 (2%)
 Strand = Plus / Plus

                                                                          
Query: 236    gcccaagaaggtgaacaatgtac-gcaatttcgaatttatcagggagcattttaagggta 294
              |||||||||||||| | |||| |  |||||| |||||||||||||| |  ||||||||||
Sbjct: 143655 gcccaagaaggtgacccatgtgcatcaattt-gaatttatcagggaacgctttaagggta 143713

                           
Query: 295    ttggcaaagattc 307
              |||||||||||||
Sbjct: 143714 ttggcaaagattc 143726



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                          
Query: 96     catcagttgcatattttcatatttgtgctggctattacacatgttgtattcagtgttttg 155
              |||||||||||||||||||| ||||| ||||| || ||||||||  | ||||||| | ||
Sbjct: 143250 catcagttgcatattttcatttttgttctggccatcacacatgtgattttcagtgctctg 143309

                       
Query: 156    acaatgctt 164
              || ||||||
Sbjct: 143310 actatgctt 143318



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                   
Query: 490    agctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgttaatgg 542
              ||||||||||||||| | |||||  |||| || ||| ||||||||||||||||
Sbjct: 144255 agctggtacttgtggatattcgttatgatattcctgctgctgaatgttaatgg 144307



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 544    tggcacacatacttttggatcgcattcattcccctt 579
              ||||||||||||||||||||| | ||| ||||||||
Sbjct: 144513 tggcacacatacttttggatctccttcgttcccctt 144548



to top

>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1099D03
          Length = 191022

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 64/73 (87%), Gaps = 2/73 (2%)
 Strand = Plus / Plus

                                                                         
Query: 236   gcccaagaaggtgaacaatgtac-gcaatttcgaatttatcagggagcattttaagggta 294
             |||||||||||||| | |||| |  |||||| |||||||||||||| |  ||||||||||
Sbjct: 80947 gcccaagaaggtgacccatgtgcatcaattt-gaatttatcagggaacgctttaagggta 81005

                          
Query: 295   ttggcaaagattc 307
             |||||||||||||
Sbjct: 81006 ttggcaaagattc 81018



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                         
Query: 96    catcagttgcatattttcatatttgtgctggctattacacatgttgtattcagtgttttg 155
             |||||||||||||||||||| ||||| ||||| || ||||||||  | ||||||| | ||
Sbjct: 80542 catcagttgcatattttcatttttgttctggccatcacacatgtgattttcagtgctctg 80601

                      
Query: 156   acaatgctt 164
             || ||||||
Sbjct: 80602 actatgctt 80610



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 490   agctggtacttgtgggtcttcgtggtgatctttctgttgctgaatgttaatgg 542
             ||||||||||||||| | |||||  |||| || ||| ||||||||||||||||
Sbjct: 81547 agctggtacttgtggatattcgttatgatattcctgctgctgaatgttaatgg 81599



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 544   tggcacacatacttttggatcgcattcattcccctt 579
             ||||||||||||||||||||| | ||| ||||||||
Sbjct: 81805 tggcacacatacttttggatctccttcgttcccctt 81840



to top

>ref|NM_116494.3| Arabidopsis thaliana calmodulin binding AT4G02600 transcript variant
            AT4G02600.1 mRNA, complete cds
          Length = 1934

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                        
Query: 517  atctttctgttgctgaatgttaatgggtggcacacatacttttggatcgcattcattccc 576
            |||||| || |||| |||||||| || ||||||||||| || ||||| ||||| ||||||
Sbjct: 1001 atctttttgctgctaaatgttaacggatggcacacatatttctggatagcatttattccc 1060



to top

>ref|NM_001036501.1| Arabidopsis thaliana calmodulin binding AT4G02600 transcript variant
            AT4G02600.2 mRNA, complete cds
          Length = 1942

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                        
Query: 517  atctttctgttgctgaatgttaatgggtggcacacatacttttggatcgcattcattccc 576
            |||||| || |||| |||||||| || ||||||||||| || ||||| ||||| ||||||
Sbjct: 996  atctttttgctgctaaatgttaacggatggcacacatatttctggatagcatttattccc 1055



to top

>gb|BT009402.1| Triticum aestivum clone wlm96.pk046.j8:fis, full insert mRNA
           sequence
          Length = 1350

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 518 tctttctgttgctgaatgttaatgggtggcacacatactt 557
           |||| ||| |||||||| | ||||||||||||||||||||
Sbjct: 343 tcttcctgctgctgaatataaatgggtggcacacatactt 382



to top

>gb|AY113992.1| Arabidopsis thaliana putative AtMlo-h1 protein (At4g02600) mRNA,
           complete cds
          Length = 1612

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 517 atctttctgttgctgaatgttaatgggtggcacacatacttttggatcgcattcattccc 576
           |||||| || |||| |||||||| || ||||||||||| || ||||| ||||| ||||||
Sbjct: 901 atctttttgctgctaaatgttaacggatggcacacatatttctggatagcatttattccc 960



to top

>gb|AY072135.1| Arabidopsis thaliana putative AtMlo-h1 protein (At4g02600) mRNA,
            complete cds
          Length = 1950

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                        
Query: 517  atctttctgttgctgaatgttaatgggtggcacacatacttttggatcgcattcattccc 576
            |||||| || |||| |||||||| || ||||||||||| || ||||| ||||| ||||||
Sbjct: 1001 atctttttgctgctaaatgttaacggatggcacacatatttctggatagcatttattccc 1060



to top

>emb|Z95352.1|ATMLOH1 A.thaliana AtMlo-h1 gene
          Length = 1880

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                        
Query: 517  atctttctgttgctgaatgttaatgggtggcacacatacttttggatcgcattcattccc 576
            |||||| || |||| |||||||| || ||||||||||| || ||||| ||||| ||||||
Sbjct: 993  atctttttgctgctaaatgttaacggatggcacacatatttctggatagcatttattccc 1052



to top

>gb|DQ213959.1| Taeniopygia guttata clone 0061P0034H08 RAS-like estrogen-regulated
           growth inhibitor variant 2-like mRNA, complete sequence
          Length = 1058

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 200 ggaggatgccattcagaaaga 220
           |||||||||||||||||||||
Sbjct: 455 ggaggatgccattcagaaaga 475



to top

>ref|XM_464475.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1476

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 529 ctgaatgttaatgggtggcacacatactt 557
           |||||| | ||||||||||||||||||||
Sbjct: 812 ctgaatataaatgggtggcacacatactt 840



to top

>ref|XM_472638.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1431

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 336 ttcaagcagttctatggatcagtaa 360
           |||||||||||||||||||| ||||
Sbjct: 676 ttcaagcagttctatggatcggtaa 700



to top

>emb|BX677675.9| Zebrafish DNA sequence from clone DKEYP-90G12 in linkage group 2,
             complete sequence
          Length = 124301

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 146   cagtgttttgacaatgctttt 166
             |||||||||||||||||||||
Sbjct: 66493 cagtgttttgacaatgctttt 66473



to top

>emb|AL731606.2|OSJN00249 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058G03,
             complete sequence
          Length = 46422

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 336   ttcaagcagttctatggatcagtaa 360
             |||||||||||||||||||| ||||
Sbjct: 38014 ttcaagcagttctatggatcggtaa 37990



to top

>gb|AC108162.4| Homo sapiens BAC clone RP11-686G17 from 4, complete sequence
          Length = 185624

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 197    gtgggaggatgccattcagaaagat 221
              ||||||||||||||||| |||||||
Sbjct: 170432 gtgggaggatgccattctgaaagat 170408



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 336      ttcaagcagttctatggatcagtaa 360
                |||||||||||||||||||| ||||
Sbjct: 22139533 ttcaagcagttctatggatcggtaa 22139509



to top

>dbj|AK066134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N01, full
           insert sequence
          Length = 1474

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 529 ctgaatgttaatgggtggcacacatactt 557
           |||||| | ||||||||||||||||||||
Sbjct: 811 ctgaatataaatgggtggcacacatactt 839



to top

>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from
             chromosome 4, complete sequence
          Length = 90825

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 336   ttcaagcagttctatggatcagtaa 360
             |||||||||||||||||||| ||||
Sbjct: 64039 ttcaagcagttctatggatcggtaa 64015



to top

>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08,
            complete sequence
          Length = 118959

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 336  ttcaagcagttctatggatcagtaa 360
            |||||||||||||||||||| ||||
Sbjct: 9394 ttcaagcagttctatggatcggtaa 9370



to top

>emb|AL845488.7| Mouse DNA sequence from clone RP23-215P8 on chromosome 2, complete
              sequence
          Length = 153445

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 95     acatcagttgcatattttcat 115
              |||||||||||||||||||||
Sbjct: 142740 acatcagttgcatattttcat 142720



to top

>gb|AY599871.1| Physcomitrella patens MLO1 (Mlo1) mRNA, complete cds
          Length = 1895

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 96  catcagttgcatattttcatatttgtgctggctatt 131
           |||||| | ||||||||||| |||||| ||||||||
Sbjct: 455 catcagctccatattttcatttttgtgatggctatt 490



to top

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 45      ggtgtctgccggtccaaggg 64
               ||||||||||||||||||||
Sbjct: 1886216 ggtgtctgccggtccaaggg 1886197



to top

>gb|AC107786.14| Mus musculus chromosome 5, clone RP23-5E3, complete sequence
          Length = 226673

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   atattttcatatttgtgctg 125
             ||||||||||||||||||||
Sbjct: 62585 atattttcatatttgtgctg 62566



to top

>gb|AC157933.4| Mus musculus chromosome 5, clone RP24-189N4, complete sequence
          Length = 185286

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  atattttcatatttgtgctg 125
            ||||||||||||||||||||
Sbjct: 6238 atattttcatatttgtgctg 6257



to top

>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete
              sequence
          Length = 787999

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 321    tggctgcattcgtttttcaa 340
              ||||||||||||||||||||
Sbjct: 680278 tggctgcattcgtttttcaa 680259



to top

>gb|AC138320.12| Mus musculus chromosome 5, clone RP23-181I1, complete sequence
          Length = 230584

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   tgttttgacaatgcttttag 168
             ||||||||||||||||||||
Sbjct: 80320 tgttttgacaatgcttttag 80301



to top

>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0009C07, complete sequence
          Length = 148731

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    gcggctgctcagcggcggcg 33
             ||||||||||||||||||||
Sbjct: 98839 gcggctgctcagcggcggcg 98820



to top

>gb|AY812943.1| Schistosoma japonicum SJCHGC02634 protein mRNA, complete cds
          Length = 1401

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 136  atgttgtattcagtgttttg 155
            ||||||||||||||||||||
Sbjct: 1120 atgttgtattcagtgttttg 1139



to top

>ref|XR_001840.1| PREDICTED: Mus musculus similar to retinoblastoma-binding protein 6
            isoform 2 (LOC666160), mRNA
          Length = 2735

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 182  acatcaatggaaactgtggg 201
            ||||||||||||||||||||
Sbjct: 2611 acatcaatggaaactgtggg 2630



to top

>ref|XR_004826.1| PREDICTED: Mus musculus similar to retinoblastoma-binding protein 6
            isoform 2 (LOC675746), mRNA
          Length = 2735

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 182  acatcaatggaaactgtggg 201
            ||||||||||||||||||||
Sbjct: 2611 acatcaatggaaactgtggg 2630



to top

>gb|AF128880.2| Sedimentibacter hydroxybenzoicus 4-hydroxybenzoate decarboxylase
            subunit C (shdC), 4-hydroxybenzoate decarboxylase subunit
            D (shdD), and 4-hydroxybenzoate decarboxylase subunit B
            (shdB) genes, complete cds
          Length = 5796

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 550  acatacttttggatcgcatt 569
            ||||||||||||||||||||
Sbjct: 4912 acatacttttggatcgcatt 4931



to top

>gb|AC010692.4| Drosophila melanogaster 3L BAC RP98-11B23 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 179164

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 180   atacatcaatggaaactgtgggag 203
             |||||||||| |||||||||||||
Sbjct: 39268 atacatcaatcgaaactgtgggag 39245



to top

>emb|BX000690.46| Zebrafish DNA sequence from clone CH211-1C6, complete sequence
          Length = 182934

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   acatgttgtattcagtgttt 153
             ||||||||||||||||||||
Sbjct: 26569 acatgttgtattcagtgttt 26588



to top

>ref|NM_169222.2| Drosophila melanogaster CG31462-PA (CG31462) mRNA, complete cds
          Length = 3159

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 13  ggcggctgctcagcggcggcgcgg 36
           ||||||| ||||||||||||||||
Sbjct: 803 ggcggctcctcagcggcggcgcgg 780



to top

>gb|AC102341.10| Mus musculus chromosome 8, clone RP23-214E1, complete sequence
          Length = 187701

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 178    agatacatcaatggaaactg 197
              ||||||||||||||||||||
Sbjct: 157812 agatacatcaatggaaactg 157831



to top

>dbj|AB102868.1| Salmonella typhimurium bacteriophage ST104 DNA, complete genome
          Length = 41391

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 387  cttggttttatcatgaccca 406
            ||||||||||||||||||||
Sbjct: 9484 cttggttttatcatgaccca 9465



to top

>gb|AC097716.5| Homo sapiens BAC clone RP11-619J20 from 4, complete sequence
          Length = 127248

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 422   tgaaattcgatttccataaataca 445
             ||||||| ||||||||||||||||
Sbjct: 49595 tgaaattagatttccataaataca 49572



to top

>gb|AC148340.3| Medicago truncatula chromosome 2 BAC clone mth2-22d10, complete
             sequence
          Length = 105618

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   aaagatacatcaatggaaac 195
             ||||||||||||||||||||
Sbjct: 51478 aaagatacatcaatggaaac 51459



to top

>gb|AC012646.6|AC012646 Drosophila melanogaster, chromosome 3R, region 85A-85B, BAC clone
              BACR03F16, complete sequence
          Length = 204681

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 13     ggcggctgctcagcggcggcgcgg 36
              ||||||| ||||||||||||||||
Sbjct: 200212 ggcggctcctcagcggcggcgcgg 200189



to top

>gb|AC009539.6|AC009539 Drosophila melanogaster, chromosome 3R, region 85A-85A, BAC clone
             BACR33N15, complete sequence
          Length = 187701

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 13    ggcggctgctcagcggcggcgcgg 36
             ||||||| ||||||||||||||||
Sbjct: 73649 ggcggctcctcagcggcggcgcgg 73626



to top

>gb|AC008306.3|AC008306 Drosophila melanogaster, chromosome 2R, region 51B-51B, BAC clone
              BACR27M04, complete sequence
          Length = 169689

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 101    gttgcatattttcatatttgtgct 124
              ||||||||||||||||||| ||||
Sbjct: 108850 gttgcatattttcatatttttgct 108827



to top

>gb|AC018900.8|AC018900 Homo sapiens chromosome 15 clone RP11-198M11 map 15q21.1, complete
             sequence
          Length = 177657

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 513   ggtgatctttctgttgctgaatgt 536
             |||| |||||||||||||||||||
Sbjct: 70933 ggtgttctttctgttgctgaatgt 70956



to top

>gb|AC078847.2|AC078847 Homo sapiens chromosome 7 clone RP11-3M15, complete sequence
          Length = 170919

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   aggtggttgggataagctgg 495
             ||||||||||||||||||||
Sbjct: 55074 aggtggttgggataagctgg 55055



to top

>gb|AY029318.1| Zea mays seven transmembrane protein Mlo7 mRNA, complete cds
          Length = 1660

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 94  tacatcagttgcatattttcatatttgt 121
           |||||||| |||| ||||||||||||||
Sbjct: 410 tacatcagctgcacattttcatatttgt 437



to top

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 14      gcggctgctcagcggcggcgcggc 37
               |||||||| |||||||||||||||
Sbjct: 2957682 gcggctgcgcagcggcggcgcggc 2957659



to top

>gb|AC009276.9|AC009276 Homo sapiens chromosome 7 clone RP11-239G19, complete sequence
          Length = 163631

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 476   aggtggttgggataagctgg 495
             ||||||||||||||||||||
Sbjct: 23476 aggtggttgggataagctgg 23495



to top

>gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, complete cds
          Length = 1013

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 15  cggctgctcagcggcggcgc 34
           ||||||||||||||||||||
Sbjct: 133 cggctgctcagcggcggcgc 114



to top

>emb|BX005271.9| Zebrafish DNA sequence from clone CH211-145F15 in linkage group 5,
             complete sequence
          Length = 162019

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   ttgcatattttcatatttgt 121
             ||||||||||||||||||||
Sbjct: 40831 ttgcatattttcatatttgt 40812



to top

>emb|AL391158.5|CNS06C83 Human chromosome 14 DNA sequence BAC R-560O13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 202792

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   ttgcatattttcatatttgt 121
             ||||||||||||||||||||
Sbjct: 46251 ttgcatattttcatatttgt 46270



to top

>gb|AE003678.3| Drosophila melanogaster chromosome 3R, section 16 of 118 of the complete
              sequence
          Length = 244757

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 13     ggcggctgctcagcggcggcgcgg 36
              ||||||| ||||||||||||||||
Sbjct: 188232 ggcggctcctcagcggcggcgcgg 188255



to top

>gb|AE003814.3| Drosophila melanogaster chromosome 2R, section 36 of 73 of the complete
              sequence
          Length = 254438

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 101    gttgcatattttcatatttgtgct 124
              ||||||||||||||||||| ||||
Sbjct: 213124 gttgcatattttcatatttttgct 213101



to top

>gb|AE003533.4| Drosophila melanogaster chromosome 3L, section 52 of 83 of the complete
              sequence
          Length = 289141

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 180    atacatcaatggaaactgtgggag 203
              |||||||||| |||||||||||||
Sbjct: 108222 atacatcaatcgaaactgtgggag 108245



to top

>dbj|AP001972.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2562J17, complete
             sequences
          Length = 215225

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 473   agaaggtggttgggataagctggt 496
             ||||||||| ||||||||||||||
Sbjct: 19667 agaaggtgggtgggataagctggt 19690



to top

>gb|AC151909.5| Mus musculus BAC clone RP23-60H14 from chromosome 8, complete sequence
          Length = 208855

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   agatacatcaatggaaactg 197
             ||||||||||||||||||||
Sbjct: 97685 agatacatcaatggaaactg 97704



to top

>emb|BX469893.9| Zebrafish DNA sequence from clone DKEY-252H13 in linkage group 5,
            complete sequence
          Length = 159139

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 102  ttgcatattttcatatttgt 121
            ||||||||||||||||||||
Sbjct: 7031 ttgcatattttcatatttgt 7012



to top

>gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, complete cds
          Length = 1056

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 15  cggctgctcagcggcggcgc 34
           ||||||||||||||||||||
Sbjct: 165 cggctgctcagcggcggcgc 146


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,448,875
Number of Sequences: 3902068
Number of extensions: 5448875
Number of successful extensions: 103180
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102783
Number of HSP's gapped (non-prelim): 381
length of query: 588
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 565
effective length of database: 17,143,297,704
effective search space: 9685963202760
effective search space used: 9685963202760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top