ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd1m17 |
|---|---|
| Clone Library Name | barley_pub |
>CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 324 Score = 237 bits (605), Expect(2) = 2e-80 Identities = 118/134 (88%), Positives = 118/134 (88%) Frame = +2 Query: 2 TAAANWCYATVAPRARSSTIAASLGTPAPSSSASFRPKLIRTTXXXXXXXXXXXXXXXXE 181 TAAANWCYATVAPRARSSTIAASLGTPAPSSSASFRPKLIRTT E Sbjct: 69 TAAANWCYATVAPRARSSTIAASLGTPAPSSSASFRPKLIRTTPVQAAPVAPALMDAAVE 128 Query: 182 RLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRN 361 RLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRN Sbjct: 129 RLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRN 188 Query: 362 IANMVPAYCKNKYA 403 IANMVPAYCKNKYA Sbjct: 189 IANMVPAYCKNKYA 202 Score = 81.3 bits (199), Expect(2) = 2e-80 Identities = 40/40 (100%), Positives = 40/40 (100%) Frame = +3 Query: 405 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGAD 524 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGAD Sbjct: 203 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGAD 242
>CAHC_TOBAC (P27141) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 321 Score = 102 bits (254), Expect(2) = 5e-33 Identities = 46/75 (61%), Positives = 56/75 (74%) Frame = +2 Query: 179 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 358 E +K GF FKTE Y+K P + L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 115 EHMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVR 174 Query: 359 NIANMVPAYCKNKYA 403 NIANMVPAY K +Y+ Sbjct: 175 NIANMVPAYDKTRYS 189 Score = 58.2 bits (139), Expect(2) = 5e-33 Identities = 31/46 (67%), Positives = 36/46 (78%), Gaps = 1/46 (2%) Frame = +3 Query: 390 RTSTPGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSL-KDGAD 524 +T GVG+AIEYAV LKVE IVVIGHS CGGIK L+SL DG++ Sbjct: 185 KTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSE 230
>CAHC_SPIOL (P16016) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 319 Score = 102 bits (255), Expect(2) = 1e-32 Identities = 47/75 (62%), Positives = 57/75 (76%) Frame = +2 Query: 179 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 358 +R+K GF KFK E Y+K P + L GQAPK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 113 QRIKEGFIKFKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVR 172 Query: 359 NIANMVPAYCKNKYA 403 NIANMVP + K+KYA Sbjct: 173 NIANMVPVFDKDKYA 187 Score = 56.6 bits (135), Expect(2) = 1e-32 Identities = 28/37 (75%), Positives = 30/37 (81%) Frame = +3 Query: 405 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 515 GVG+AIEYAV LKVE IVVIGHS CGGIK L+S D Sbjct: 188 GVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPD 224
>CAHX_FLABR (P46511) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 99.8 bits (247), Expect(2) = 5e-32 Identities = 44/75 (58%), Positives = 57/75 (76%) Frame = +2 Query: 179 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 358 ER+K+GF KFKTE + P ++ L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 124 ERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVR 183 Query: 359 NIANMVPAYCKNKYA 403 N+ANMVP + K KY+ Sbjct: 184 NVANMVPPFDKTKYS 198 Score = 57.4 bits (137), Expect(2) = 5e-32 Identities = 27/45 (60%), Positives = 33/45 (73%) Frame = +3 Query: 381 PTARTSTPGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 515 P +T GVG+A+EYAV LKV+ I VIGHSRCGGIK L++ D Sbjct: 191 PFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPD 235
>CAHX_FLABI (P46510) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 99.8 bits (247), Expect(2) = 5e-32 Identities = 44/75 (58%), Positives = 57/75 (76%) Frame = +2 Query: 179 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 358 ER+K+GF KFKTE + P ++ L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 124 ERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVR 183 Query: 359 NIANMVPAYCKNKYA 403 N+ANMVP + K KY+ Sbjct: 184 NVANMVPPFDKTKYS 198 Score = 57.4 bits (137), Expect(2) = 5e-32 Identities = 27/45 (60%), Positives = 33/45 (73%) Frame = +3 Query: 381 PTARTSTPGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 515 P +T GVG+A+EYAV LKV+ I VIGHSRCGGIK L++ D Sbjct: 191 PFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPD 235
>CAH1_FLALI (P46512) Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase| 1) Length = 330 Score = 99.8 bits (247), Expect(2) = 5e-32 Identities = 44/75 (58%), Positives = 57/75 (76%) Frame = +2 Query: 179 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 358 ER+K+GF KFKTE + P ++ L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 124 ERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVR 183 Query: 359 NIANMVPAYCKNKYA 403 N+ANMVP + K KY+ Sbjct: 184 NVANMVPPFDKTKYS 198 Score = 57.4 bits (137), Expect(2) = 5e-32 Identities = 27/45 (60%), Positives = 33/45 (73%) Frame = +3 Query: 381 PTARTSTPGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 515 P +T GVG+A+EYAV LKV+ I VIGHSRCGGIK L++ D Sbjct: 191 PFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPD 235
>CAHX_FLAPR (P46281) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 329 Score = 99.4 bits (246), Expect(2) = 7e-32 Identities = 44/75 (58%), Positives = 57/75 (76%) Frame = +2 Query: 179 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 358 ER+K+GF KFKTE + P ++ L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 123 ERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVR 182 Query: 359 NIANMVPAYCKNKYA 403 N+ANMVP + K KY+ Sbjct: 183 NVANMVPPFDKTKYS 197 Score = 57.4 bits (137), Expect(2) = 7e-32 Identities = 27/45 (60%), Positives = 33/45 (73%) Frame = +3 Query: 381 PTARTSTPGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 515 P +T GVG+A+EYAV LKV+ I VIGHSRCGGIK L++ D Sbjct: 190 PFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPD 234
>CAH2_ARATH (P42737) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) Length = 259 Score = 96.7 bits (239), Expect(2) = 2e-30 Identities = 54/120 (45%), Positives = 64/120 (53%) Frame = +2 Query: 44 ARSSTIAASLGTPAPSSSASFRPKLIRTTXXXXXXXXXXXXXXXXERLKTGFEKFKTEVY 223 A+ I A L + S S SF P ER+K GF FK E Y Sbjct: 29 AKVKKITAELQAASSSDSKSFDP---------------------VERIKEGFVTFKKEKY 67 Query: 224 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYA 403 + P + L GQ+PKYMVFAC+DSRVCPS L PG+AF +RNIANMVP + K KYA Sbjct: 68 ETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYA 127 Score = 55.5 bits (132), Expect(2) = 2e-30 Identities = 28/42 (66%), Positives = 31/42 (73%) Frame = +3 Query: 381 PTARTSTPGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLS 506 P + GVG+AIEYAV LKVE IVVIGHS CGGIK L+S Sbjct: 120 PFDKVKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMS 161
>CAHC_PEA (P17067) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) [Contains: Carbonic anhydrase, 27 kDa isoform; Carbonic anhydrase, 25 kDa isoform] Length = 328 Score = 99.0 bits (245), Expect(2) = 3e-30 Identities = 45/75 (60%), Positives = 55/75 (73%) Frame = +2 Query: 179 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 358 ER+KTGF FK E YDK P + L GQ+P +MVFAC+DSRVCPS L +PGEAF +R Sbjct: 122 ERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVR 181 Query: 359 NIANMVPAYCKNKYA 403 N+AN+VP Y + KYA Sbjct: 182 NVANLVPPYDQAKYA 196 Score = 52.4 bits (124), Expect(2) = 3e-30 Identities = 27/42 (64%), Positives = 29/42 (69%) Frame = +3 Query: 381 PTARTSTPGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLS 506 P + G G+AIEYAV LKV IVVIGHS CGGIK LLS Sbjct: 189 PYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLS 230
>CAHC_ARATH (P27140) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 347 Score = 95.1 bits (235), Expect(2) = 6e-30 Identities = 44/74 (59%), Positives = 53/74 (71%) Frame = +2 Query: 179 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 358 E +K GF KFK E Y+ P + L GQ+PKYMVFAC+DSRVCPS L +PG+AF +R Sbjct: 130 ETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVR 189 Query: 359 NIANMVPAYCKNKY 400 NIANMVP + K KY Sbjct: 190 NIANMVPPFDKVKY 203 Score = 55.1 bits (131), Expect(2) = 6e-30 Identities = 28/42 (66%), Positives = 31/42 (73%) Frame = +3 Query: 381 PTARTSTPGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLS 506 P + GVG+AIEYAV LKVE IVVIGHS CGGIK L+S Sbjct: 197 PFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMS 238
>CAH2_FLALI (P46513) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) (Fragment) Length = 190 Score = 73.9 bits (180), Expect(2) = 1e-23 Identities = 33/57 (57%), Positives = 42/57 (73%) Frame = +2 Query: 233 PDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYA 403 P + L GQ+PK++VFAC+DSRVCPS L +PGEAF +RNIANMVP Y K++ Sbjct: 2 PTLYGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHS 58 Score = 55.1 bits (131), Expect(2) = 1e-23 Identities = 27/37 (72%), Positives = 30/37 (81%) Frame = +3 Query: 405 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 515 G G+AIEYAV LKVE IVVIGHS CGGIK L+S+ D Sbjct: 59 GAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPD 95
>CYNT_SYNY3 (Q54735) Carbonic anhydrase (EC 4.2.1.1)| Length = 274 Score = 59.3 bits (142), Expect(2) = 3e-16 Identities = 27/69 (39%), Positives = 39/69 (56%) Frame = +2 Query: 179 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 358 +RL G +KF+ + D FE L GQ P+ + C+DSRV P++ E G+ F IR Sbjct: 2 QRLIEGLQKFREGYFSSHRDLFEQLSHGQHPRILFICCSDSRVDPNLITQSEVGDLFVIR 61 Query: 359 NIANMVPAY 385 N N++P Y Sbjct: 62 NAGNIIPPY 70 Score = 44.7 bits (104), Expect(2) = 3e-16 Identities = 20/43 (46%), Positives = 28/43 (65%) Frame = +3 Query: 381 PTARTSTPGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSL 509 P + G G+A+EYA+ AL++ I+V GHS CG +K LL L Sbjct: 68 PPYGAANGGEGAAMEYALVALEINQIIVCGHSHCGAMKGLLKL 110
>CYNT_SYNP7 (P27134) Carbonic anhydrase (EC 4.2.1.1)| Length = 272 Score = 53.9 bits (128), Expect(2) = 2e-15 Identities = 24/68 (35%), Positives = 35/68 (51%) Frame = +2 Query: 182 RLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRN 361 +L G F+T Y D FE GQ P+ + C+DSR+ P++ GE F IRN Sbjct: 3 KLIEGLRHFRTSYYPSHRDLFEQFAKGQHPRVLFITCSDSRIDPNLITQSGMGELFVIRN 62 Query: 362 IANMVPAY 385 N++P + Sbjct: 63 AGNLIPPF 70 Score = 47.0 bits (110), Expect(2) = 2e-15 Identities = 21/43 (48%), Positives = 28/43 (65%) Frame = +3 Query: 381 PTARTSTPGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSL 509 P + G G++IEYA+ AL +E +VV GHS CG +K LL L Sbjct: 68 PPFGAANGGEGASIEYAIAALNIEHVVVCGHSHCGAMKGLLKL 110
>CAN_SHIFL (P61518) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 220 Score = 53.1 bits (126), Expect(2) = 1e-11 Identities = 24/51 (47%), Positives = 32/51 (62%) Frame = +2 Query: 224 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMV 376 ++ P FFE L Q P+++ C+DSRV GLEPGE F RN+AN+V Sbjct: 20 EEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLV 70 Score = 35.4 bits (80), Expect(2) = 1e-11 Identities = 14/28 (50%), Positives = 21/28 (75%) Frame = +3 Query: 414 SAIEYAVCALKVEVIVVIGHSRCGGIKA 497 S ++YAV L+VE I++ GH CGG++A Sbjct: 79 SVVQYAVDVLEVEHIIICGHYGCGGVQA 106
>CAN_ECOLI (P61517) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 220 Score = 53.1 bits (126), Expect(2) = 1e-11 Identities = 24/51 (47%), Positives = 32/51 (62%) Frame = +2 Query: 224 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMV 376 ++ P FFE L Q P+++ C+DSRV GLEPGE F RN+AN+V Sbjct: 20 EEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLV 70 Score = 35.4 bits (80), Expect(2) = 1e-11 Identities = 14/28 (50%), Positives = 21/28 (75%) Frame = +3 Query: 414 SAIEYAVCALKVEVIVVIGHSRCGGIKA 497 S ++YAV L+VE I++ GH CGG++A Sbjct: 79 SVVQYAVDVLEVEHIIICGHYGCGGVQA 106
>CAN_HAEIN (P45148) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 229 Score = 44.7 bits (104), Expect(2) = 5e-11 Identities = 21/51 (41%), Positives = 28/51 (54%) Frame = +2 Query: 224 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMV 376 ++ +F+ L Q P Y+ C+DSRV LEPGE F RN+AN V Sbjct: 20 EENSTYFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGELFVHRNVANQV 70 Score = 41.6 bits (96), Expect(2) = 5e-11 Identities = 17/34 (50%), Positives = 25/34 (73%) Frame = +3 Query: 414 SAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 515 S ++YAV LK+E I++ GH+ CGGI A ++ KD Sbjct: 79 SVVQYAVDVLKIEHIIICGHTNCGGIHAAMADKD 112
>CYNT_HELPJ (Q9ZN54) Carbonic anhydrase (EC 4.2.1.1)| Length = 221 Score = 55.5 bits (132), Expect(2) = 1e-10 Identities = 23/62 (37%), Positives = 38/62 (61%) Frame = +2 Query: 194 GFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANM 373 G +F+ Y++ + +E LK Q P + +C DSRV P++ G +PGE + IRN+ N+ Sbjct: 6 GALEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNV 65 Query: 374 VP 379 +P Sbjct: 66 IP 67 Score = 29.3 bits (64), Expect(2) = 1e-10 Identities = 10/34 (29%), Positives = 22/34 (64%) Frame = +3 Query: 414 SAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 515 +++EYA+ + V+ +++ GHS CG ++ + D Sbjct: 80 ASVEYAIAHVGVQNLIICGHSDCGACGSIHLIHD 113
>CYNT_ECOLI (P0ABE9) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 219 Score = 60.8 bits (146), Expect = 2e-09 Identities = 26/64 (40%), Positives = 40/64 (62%) Frame = +2 Query: 194 GFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANM 373 GF KF+ E + K+ F+ L Q+P+ + +C+DSR+ P + EPG+ F IRN N+ Sbjct: 7 GFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNI 66 Query: 374 VPAY 385 VP+Y Sbjct: 67 VPSY 70 Score = 43.1 bits (100), Expect = 5e-04 Identities = 25/74 (33%), Positives = 38/74 (51%) Frame = +3 Query: 285 SRAPTRVCARRSPWALSPVRPSPSATSPTWSRPTARTSTPGVGSAIEYAVCALKVEVIVV 464 SR + +R P L +R + + P+ GV +++EYAV AL+V IV+ Sbjct: 42 SRLVPELVTQREPGDLFVIRNAGNIV------PSYGPEPGGVSASVEYAVAALRVSDIVI 95 Query: 465 IGHSRCGGIKALLS 506 GHS CG + A+ S Sbjct: 96 CGHSNCGAMTAIAS 109
>CYNT_ECO57 (P0ABF0) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 219 Score = 60.8 bits (146), Expect = 2e-09 Identities = 26/64 (40%), Positives = 40/64 (62%) Frame = +2 Query: 194 GFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANM 373 GF KF+ E + K+ F+ L Q+P+ + +C+DSR+ P + EPG+ F IRN N+ Sbjct: 7 GFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNI 66 Query: 374 VPAY 385 VP+Y Sbjct: 67 VPSY 70 Score = 43.1 bits (100), Expect = 5e-04 Identities = 25/74 (33%), Positives = 38/74 (51%) Frame = +3 Query: 285 SRAPTRVCARRSPWALSPVRPSPSATSPTWSRPTARTSTPGVGSAIEYAVCALKVEVIVV 464 SR + +R P L +R + + P+ GV +++EYAV AL+V IV+ Sbjct: 42 SRLVPELVTQREPGDLFVIRNAGNIV------PSYGPEPGGVSASVEYAVAALRVSDIVI 95 Query: 465 IGHSRCGGIKALLS 506 GHS CG + A+ S Sbjct: 96 CGHSNCGAMTAIAS 109
>CYNT_HELPY (O24855) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 221 Score = 50.1 bits (118), Expect(2) = 5e-09 Identities = 22/62 (35%), Positives = 36/62 (58%) Frame = +2 Query: 194 GFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANM 373 G +F+ Y++ + +E LK Q P + +C DSRV P++ G +PGE + I N+ N+ Sbjct: 6 GALEFQENEYEELKELYESLKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVICNMGNV 65 Query: 374 VP 379 P Sbjct: 66 NP 67 Score = 29.3 bits (64), Expect(2) = 5e-09 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = +3 Query: 414 SAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 515 ++IEYA+ + V+ +++ GHS CG ++ + D Sbjct: 80 ASIEYAIAHVGVQNLIICGHSDCGACGSVHLIHD 113
>NCE3_YEAST (P53615) Non-classical export protein 3| Length = 221 Score = 37.7 bits (86), Expect(2) = 2e-07 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Frame = +2 Query: 203 KFKTEVYDKKPDFFEPLKA-GQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANM 373 K+ +++ + +P F A GQ+P + C+DSR + LG+ PGE FT +N+AN+ Sbjct: 27 KWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENC-LGVLPGEVFTWKNVANI 83 Score = 36.6 bits (83), Expect(2) = 2e-07 Identities = 13/31 (41%), Positives = 22/31 (70%) Frame = +3 Query: 414 SAIEYAVCALKVEVIVVIGHSRCGGIKALLS 506 + +E+A+ LKV +++ GH+ CGGIK L+ Sbjct: 93 ATLEFAIICLKVNKVIICGHTDCGGIKTCLT 123
>MTMR3_MOUSE (Q8K296) Myotubularin-related protein 3 (EC 3.1.3.48)| Length = 1075 Score = 31.6 bits (70), Expect = 1.4 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = +3 Query: 336 PVRPSP-SATSPTWSRPTARTSTPGVGSAIEYAVCALKVE 452 PV P P SA P W RTS+PG ++ A CAL ++ Sbjct: 879 PVAPEPRSAERPQWDSVLHRTSSPGNTLSLLQAPCALPLD 918
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 26.9 bits (58), Expect(2) = 3.9 Identities = 29/101 (28%), Positives = 35/101 (34%) Frame = +1 Query: 130 PRPGRARRTCIDGRRRGAPQDRVREVQDRGLRQEARFLRAAQGRPGAQVHGVRVRRLACV 309 P+PG G R GAP+ G + R + QGRPG Q G +R Sbjct: 164 PKPG--------GARPGAPKPGGARPSGPG---QDRGQQGGQGRPGGQRPGAPAQR---- 208 Query: 310 PVGHPGP*AR*GLHHPQHRQHGPGLLQEQVRPVLDRPSNTP 432 P G PG P + G RP RP P Sbjct: 209 PGGRPGG------PRPGNNPFTSGGNAGMARPSAPRPQGGP 243 Score = 21.6 bits (44), Expect(2) = 3.9 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = +2 Query: 29 TVAPRARSSTIAASLGTPAPSSSASFRP 112 + AP+A ++ A+ PAP+ S RP Sbjct: 100 SAAPKAPAAQQPAAPSAPAPAPSQGPRP 127
>NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neurofilament| protein) (Neurofilament medium polypeptide) (NF-M) Length = 925 Score = 30.0 bits (66), Expect = 4.0 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +3 Query: 315 RSPWALSPVRPSPSATSPTWSRPTARTSTP 404 +SP A SP SP+A SPT P A++ P Sbjct: 663 KSPEAKSPEAKSPTAKSPTAKSPAAKSPAP 692 Score = 30.0 bits (66), Expect = 4.0 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%) Frame = +3 Query: 315 RSPWALSPVRPSPSATSPTWSRPTART---STPGVGSAIE 425 +SP A SP SP A SPT PTA++ +P S +E Sbjct: 658 KSPTAKSPEAKSPEAKSPTAKSPTAKSPAAKSPAPKSPVE 697 Score = 29.6 bits (65), Expect = 5.3 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +3 Query: 315 RSPWALSPVRPSPSATSPTWSRPTART 395 +SP A SP SP A SPT PTA++ Sbjct: 628 KSPTAKSPEAKSPEAKSPTAKSPTAKS 654 Score = 29.6 bits (65), Expect = 5.3 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +3 Query: 297 TRVCARRSPWALSPVRPSPSATSPTWSRPTARTST 401 T+ +SP A SP SP+A SPT P A++ T Sbjct: 627 TKSPTAKSPEAKSPEAKSPTAKSPTAKSPVAKSPT 661 Score = 29.3 bits (64), Expect = 6.9 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3 Query: 315 RSPWALSPVRPSPSATSPTWSRPTARTST 401 +SP A SP SP A SP PTA++ T Sbjct: 653 KSPVAKSPTAKSPEAKSPEAKSPTAKSPT 681 Score = 29.3 bits (64), Expect = 6.9 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3 Query: 315 RSPWALSPVRPSPSATSPTWSRPTARTST 401 +SP A SPV SP+A SP P A++ T Sbjct: 648 KSPTAKSPVAKSPTAKSPEAKSPEAKSPT 676
>CHEB2_BRAJA (Q89T55) Chemotaxis response regulator protein-glutamate| methylesterase of group 2 operon (EC 3.1.1.61) Length = 397 Score = 29.6 bits (65), Expect = 5.3 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 5/75 (6%) Frame = +3 Query: 300 RVCARRSPWALSPVRPSPSATSPTWSR-----PTARTSTPGVGSAIEYAVCALKVEVIVV 464 R A SP L+P P P+A +P +R P A PG S ++ A KV ++ Sbjct: 154 RKAAVASP-PLAPASPPPAARAPFVARPAAPAPAANALLPGALSTRPFSTLAPKV---LL 209 Query: 465 IGHSRCGGIKALLSL 509 IG S GG +AL++L Sbjct: 210 IG-SSTGGPQALMAL 223
>OMP19_RHIME (Q926C0) Outer membrane lipoprotein omp19 homolog precursor| Length = 179 Score = 29.6 bits (65), Expect = 5.3 Identities = 17/57 (29%), Positives = 26/57 (45%) Frame = +3 Query: 285 SRAPTRVCARRSPWALSPVRPSPSATSPTWSRPTARTSTPGVGSAIEYAVCALKVEV 455 SRAP + A+ P + P P+ S + PT T+ PG + E A ++V Sbjct: 33 SRAPAPLQAQPVPSVSAGQLPPPAGASQFPAAPTTGTAAPGAAAGTEVAAATNALDV 89
>YA28_SCHPO (Q09699) Hypothetical protein C2F7.08c in chromosome I| Length = 632 Score = 29.3 bits (64), Expect = 6.9 Identities = 18/44 (40%), Positives = 23/44 (52%) Frame = +1 Query: 190 DRVREVQDRGLRQEARFLRAAQGRPGAQVHGVRVRRLACVPVGH 321 D E QDRG +EAR +R QGR HG+ + L +P H Sbjct: 366 DAEMERQDRGYDREARRMRRRQGR---AKHGIMLPDLRDIPKIH 406
>DPO3_LACLA (Q9CDT7) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)| Length = 1638 Score = 29.3 bits (64), Expect = 6.9 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Frame = +2 Query: 251 LKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTI-----RNIANMVPAYCKNKYARCWI 415 +++G A V C D + + GLE G AFTI + + N +PA + KY Sbjct: 1383 IRSGIADLSSVIGCRDDIMVYLIHKGLENGLAFTIMERVRKGMWNKIPAEEREKYVEAMR 1442 Query: 416 GHRI 427 H + Sbjct: 1443 EHDV 1446
>IF2_BRUME (Q8YEB3) Translation initiation factor IF-2| Length = 959 Score = 29.3 bits (64), Expect = 6.9 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +1 Query: 151 RTCIDGRRRGAPQDRVREVQDRGLRQEARFLRAAQGRPGAQVHGVRVRRLA 303 R+ +D RRR + ++REV++R E RA + A+ H RR A Sbjct: 153 RSEMDARRRALEEAQIREVEERARAVEEAKRRAEEDARRAKEHEESARRQA 203
>CHCH2_MOUSE (Q9D1L0) Coiled-coil-helix-coiled-coil-helix domain-containing| protein 2 Length = 153 Score = 28.9 bits (63), Expect = 9.0 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 3/71 (4%) Frame = +3 Query: 285 SRAPT-RVCARRSPWALSPVRPSPSATSPTWSRPTARTSTPGVGSAIEYAVCALKVEVIV 461 SRAP R RR+P A P +PSA P A PG+ + + + V V Sbjct: 17 SRAPQMRAAPRRAPAAQPPAAAAPSAV----GSPAAAPRQPGLMAQMATTAAGVAVGSAV 72 Query: 462 --VIGHSRCGG 488 +GH+ GG Sbjct: 73 GHTLGHAITGG 83
>P3C2B_HUMAN (O00750) Phosphatidylinositol-4-phosphate 3-kinase C2| domain-containing beta polypeptide (EC 2.7.1.154) (Phosphoinositide 3-Kinase-C2-beta) (PtdIns-3-kinase C2 beta) (PI3K-C2beta) (C2-PI3K) Length = 1634 Score = 28.9 bits (63), Expect = 9.0 Identities = 15/60 (25%), Positives = 31/60 (51%) Frame = +3 Query: 345 PSPSATSPTWSRPTARTSTPGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGAD 524 P+P ++ TW+RP + VG ++ ++ ++ +++ H I+ L L+DG D Sbjct: 1488 PAPKSSDGTWARPVGK-----VGGEVKLSISYKNNKLFIMVMH-----IRGLQLLQDGND 1537
>Y1315_MYCBO (P64798) Hypothetical protein Mb1315| Length = 163 Score = 28.9 bits (63), Expect = 9.0 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = +2 Query: 224 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMV 376 D F PL + + AC D+R+ LG++ GEA IRN +V Sbjct: 13 DYASGFKGPLPMPPSKHIAIVACMDARLDVYRMLGIKEGEAHVIRNAGCVV 63
>Y1284_MYCTU (P64797) Hypothetical protein Rv1284/MT1322| Length = 163 Score = 28.9 bits (63), Expect = 9.0 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = +2 Query: 224 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMV 376 D F PL + + AC D+R+ LG++ GEA IRN +V Sbjct: 13 DYASGFKGPLPMPPSKHIAIVACMDARLDVYRMLGIKEGEAHVIRNAGCVV 63
>Y414_ARCFU (O29833) Hypothetical protein AF0414| Length = 144 Score = 28.9 bits (63), Expect = 9.0 Identities = 16/60 (26%), Positives = 27/60 (45%) Frame = +2 Query: 227 KKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYAR 406 KKPDF EP+K P+ V + S+TL + ++ + Y K+++ R Sbjct: 15 KKPDFVEPVKPVDKPEIAVKKAPLRELAASITLSALSAKKLIDMELSKIRKEYEKDEFLR 74
>RPA2_NEUCR (O74633) DNA-directed RNA polymerase I polypeptide 2 (EC 2.7.7.6)| (RNA polymerase I subunit 2) Length = 1234 Score = 28.9 bits (63), Expect = 9.0 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 4/84 (4%) Frame = +2 Query: 227 KKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYAR 406 +K DF P Q YM AC + V P + +E + +ANM P N+ R Sbjct: 662 QKEDFVGP----QEQPYMSIACTEQEVIPGDSTHVEFDPTNILSILANMTPFSDFNQSPR 717 Query: 407 ----CWIGHRIRRLRAQG*GHRGD 466 C +G + A HR D Sbjct: 718 NMYQCQMGKQTMGTPATALAHRTD 741
>LEU2_AZOVI (P96195) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 470 Score = 28.9 bits (63), Expect = 9.0 Identities = 17/47 (36%), Positives = 18/47 (38%) Frame = -2 Query: 431 GVFDGRSNTGRTCSCSRPGPCWRCCGW*RPHRAQGPG*PTGTHASRR 291 G GR+N R C PG P RA PG P G RR Sbjct: 43 GAAPGRANVARGCQHRHPG----------PQRADHPGSPVGGRRHRR 79
>ISPG_SYNPX (Q7U712) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 398 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = -3 Query: 439 AQTAYSMADPTPGVLVLAVGRDHVGDVADGEGLTGL 332 A Y TPGV+ L GRD + V + EG+ L Sbjct: 349 ADADYGYVGKTPGVISLYRGRDEIRKVPEEEGVNAL 384 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,715,873 Number of Sequences: 219361 Number of extensions: 1206035 Number of successful extensions: 5440 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 4844 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5398 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
