| Clone Name | basd1m13 |
|---|---|
| Clone Library Name | barley_pub |
>ATG26_YARLI (Q6C8M8) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)| (Autophagy-related protein 26) Length = 1424 Score = 32.7 bits (73), Expect = 0.69 Identities = 27/103 (26%), Positives = 43/103 (41%) Frame = +2 Query: 23 FRRWFAVEKGEKLLKASQCYLSTTAGPIAGVLFVSSERVAFRSDRSLELTSPKGDTVRVP 202 F++ FA+ E+L+ + C+L P G ++VS+ V FRS +R Sbjct: 797 FQKRFALGTEERLIASYHCHLHRGGIPTYGKMYVSTNYVTFRS------------FLRTK 844 Query: 203 YKVAVPLRRVKAARPSENQHRPEQKYVQLVTDDGFEFWFMGFV 331 + VPL+ V+ A D GF+F + G V Sbjct: 845 TLMIVPLKVVENA----------------TKDSGFKFGYSGLV 871
>ATG26_CRYNE (Q5KK25) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)| (Autophagy-related protein 26) Length = 1585 Score = 32.0 bits (71), Expect = 1.2 Identities = 22/74 (29%), Positives = 35/74 (47%) Frame = +2 Query: 23 FRRWFAVEKGEKLLKASQCYLSTTAGPIAGVLFVSSERVAFRSDRSLELTSPKGDTVRVP 202 FR +FA+ E+L+ YL P++G F+S+ FRS + L T + +P Sbjct: 864 FRTFFALSDKEELIDHFPGYLYRVL-PVSGRFFISTNYFCFRSSQLLYKTKESFRLMIIP 922 Query: 203 YKVAVPLRRVKAAR 244 + L+ KA R Sbjct: 923 IRDLYGLKAQKAFR 936
>LOLA_NITEU (Q82VM2) Outer-membrane lipoprotein carrier protein precursor| Length = 206 Score = 30.4 bits (67), Expect = 3.4 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = +2 Query: 242 RPSENQHRPEQKYVQLVTDDGFEFWFMGFVSYQASLQHLEQAIAES 379 RP + + +Q Y QL+ DG + WF Q ++ L+QA+ + Sbjct: 64 RPGKFRWTYDQPYQQLIVGDGKQVWFYDQDLAQVTVHRLDQALGST 109
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 30.0 bits (66), Expect = 4.5 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -1 Query: 231 TLLSGTATLYGTRTVSPLGEVSSSDRSLRKATLSDDTKSTP 109 T +S TA Y T +V P VSS+ S +T + STP Sbjct: 514 TSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTP 554 Score = 30.0 bits (66), Expect = 4.5 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -1 Query: 231 TLLSGTATLYGTRTVSPLGEVSSSDRSLRKATLSDDTKSTP 109 T +S TA Y T +V P VSS+ S +T + STP Sbjct: 400 TSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTP 440
>HCN4_MOUSE (O70507) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 (Brain cyclic nucleotide gated channel 3) (BCNG-3) Length = 1186 Score = 29.6 bits (65), Expect = 5.9 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -2 Query: 194 APCRPWARSAPATGRCGRPPSPT 126 +P P + S+P G CG PP+PT Sbjct: 857 SPLLPSSSSSPPPGACGSPPAPT 879
>CRF1_ASPFU (Q8J0P4) Probable glycosidase crf1 precursor (EC 3.2.-.-) (Crh-like| protein) (Allergen Asp f 9) Length = 395 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/69 (24%), Positives = 36/69 (52%) Frame = -1 Query: 315 QNSKPSSVTSWTYFCSGRCWFSLGLAAFTLLSGTATLYGTRTVSPLGEVSSSDRSLRKAT 136 +N+ P+ S+TY + W S+ +S ++++ + T + S+S ++ +T Sbjct: 243 ENANPAE--SYTYSDNSGSWQSIKFDGSVDISSSSSVTSSTTSTASSASSTSSKTPSTST 300 Query: 135 LSDDTKSTP 109 L+ TK+TP Sbjct: 301 LATSTKATP 309
>AGLE_RHIME (Q9Z3R5) Alpha-glucosides-binding periplasmic protein aglE| precursor Length = 458 Score = 29.3 bits (64), Expect = 7.7 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = -1 Query: 249 LGLAAFTLLSGTATLYGTRTVSPLGEVSSSDRSLRKATLSDDTK 118 +G+AAF LL+GTA L GT + L D A+L + K Sbjct: 7 IGVAAFALLAGTAGLAGTAGAADLKFKPGEDSRFNWASLEEFKK 50
>DDX54_HUMAN (Q8TDD1) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) (ATP-dependent RNA helicase DP97) Length = 881 Score = 29.3 bits (64), Expect = 7.7 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Frame = +1 Query: 1 GRRRGESLP---AVVRRGEGREAPQGLAVLPVHHRRTDRRSALRIVGEGGLPQRPVAGAD 171 GR+R S P A RR E R+ Q + P + D L I GEGG ++ AGA Sbjct: 654 GRKRQRSGPNRGAKRRREEARQRDQEFYI-PYRPKDFDSERGLSISGEGGAFEQQAAGAV 712 Query: 172 L 174 L Sbjct: 713 L 713
>PSD_METCA (Q608T0) Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65)| [Contains: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain] Length = 288 Score = 29.3 bits (64), Expect = 7.7 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +2 Query: 77 CYLSTTAGPIA----GVLFVSSERVAFRSDRSLELTSPKGDTVR 196 CY T GP+A G +FVSS + E+T P+ T+R Sbjct: 192 CYFDTAGGPMAVILVGAIFVSSIETVWHG----EVTPPRSKTIR 231
>NAPH_ECOLI (P33934) Ferredoxin-type protein napH| Length = 287 Score = 28.9 bits (63), Expect = 10.0 Identities = 14/46 (30%), Positives = 19/46 (41%) Frame = -1 Query: 396 SDQTTCDSAMACSRCCRDAW*LTKPMNQNSKPSSVTSWTYFCSGRC 259 +D+ C+ M C C + L P+ P VTS GRC Sbjct: 221 TDRQKCNRCMDCFHVCPEPHVLRAPVLDEQSPVQVTSRDCMTCGRC 266 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,728,572 Number of Sequences: 219361 Number of extensions: 1224987 Number of successful extensions: 4331 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 4171 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4331 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)