ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd1m13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ATG26_YARLI (Q6C8M8) Sterol 3-beta-glucosyltransferase (EC 2.4.1... 33 0.69
2ATG26_CRYNE (Q5KK25) Sterol 3-beta-glucosyltransferase (EC 2.4.1... 32 1.2
3LOLA_NITEU (Q82VM2) Outer-membrane lipoprotein carrier protein p... 30 3.4
4YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein P... 30 4.5
5HCN4_MOUSE (O70507) Potassium/sodium hyperpolarization-activated... 30 5.9
6CRF1_ASPFU (Q8J0P4) Probable glycosidase crf1 precursor (EC 3.2.... 30 5.9
7AGLE_RHIME (Q9Z3R5) Alpha-glucosides-binding periplasmic protein... 29 7.7
8DDX54_HUMAN (Q8TDD1) ATP-dependent RNA helicase DDX54 (EC 3.6.1.... 29 7.7
9PSD_METCA (Q608T0) Phosphatidylserine decarboxylase proenzyme (E... 29 7.7
10NAPH_ECOLI (P33934) Ferredoxin-type protein napH 29 10.0

>ATG26_YARLI (Q6C8M8) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)|
            (Autophagy-related protein 26)
          Length = 1424

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 27/103 (26%), Positives = 43/103 (41%)
 Frame = +2

Query: 23   FRRWFAVEKGEKLLKASQCYLSTTAGPIAGVLFVSSERVAFRSDRSLELTSPKGDTVRVP 202
            F++ FA+   E+L+ +  C+L     P  G ++VS+  V FRS             +R  
Sbjct: 797  FQKRFALGTEERLIASYHCHLHRGGIPTYGKMYVSTNYVTFRS------------FLRTK 844

Query: 203  YKVAVPLRRVKAARPSENQHRPEQKYVQLVTDDGFEFWFMGFV 331
              + VPL+ V+ A                  D GF+F + G V
Sbjct: 845  TLMIVPLKVVENA----------------TKDSGFKFGYSGLV 871



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>ATG26_CRYNE (Q5KK25) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)|
            (Autophagy-related protein 26)
          Length = 1585

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 22/74 (29%), Positives = 35/74 (47%)
 Frame = +2

Query: 23   FRRWFAVEKGEKLLKASQCYLSTTAGPIAGVLFVSSERVAFRSDRSLELTSPKGDTVRVP 202
            FR +FA+   E+L+     YL     P++G  F+S+    FRS + L  T      + +P
Sbjct: 864  FRTFFALSDKEELIDHFPGYLYRVL-PVSGRFFISTNYFCFRSSQLLYKTKESFRLMIIP 922

Query: 203  YKVAVPLRRVKAAR 244
             +    L+  KA R
Sbjct: 923  IRDLYGLKAQKAFR 936



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>LOLA_NITEU (Q82VM2) Outer-membrane lipoprotein carrier protein precursor|
          Length = 206

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +2

Query: 242 RPSENQHRPEQKYVQLVTDDGFEFWFMGFVSYQASLQHLEQAIAES 379
           RP + +   +Q Y QL+  DG + WF      Q ++  L+QA+  +
Sbjct: 64  RPGKFRWTYDQPYQQLIVGDGKQVWFYDQDLAQVTVHRLDQALGST 109



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>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c|
           precursor
          Length = 943

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -1

Query: 231 TLLSGTATLYGTRTVSPLGEVSSSDRSLRKATLSDDTKSTP 109
           T +S TA  Y T +V P   VSS+  S   +T +    STP
Sbjct: 514 TSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTP 554



 Score = 30.0 bits (66), Expect = 4.5
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -1

Query: 231 TLLSGTATLYGTRTVSPLGEVSSSDRSLRKATLSDDTKSTP 109
           T +S TA  Y T +V P   VSS+  S   +T +    STP
Sbjct: 400 TSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTP 440



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>HCN4_MOUSE (O70507) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 4 (Brain cyclic nucleotide
           gated channel 3) (BCNG-3)
          Length = 1186

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 194 APCRPWARSAPATGRCGRPPSPT 126
           +P  P + S+P  G CG PP+PT
Sbjct: 857 SPLLPSSSSSPPPGACGSPPAPT 879



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>CRF1_ASPFU (Q8J0P4) Probable glycosidase crf1 precursor (EC 3.2.-.-) (Crh-like|
           protein) (Allergen Asp f 9)
          Length = 395

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 17/69 (24%), Positives = 36/69 (52%)
 Frame = -1

Query: 315 QNSKPSSVTSWTYFCSGRCWFSLGLAAFTLLSGTATLYGTRTVSPLGEVSSSDRSLRKAT 136
           +N+ P+   S+TY  +   W S+       +S ++++  + T +     S+S ++   +T
Sbjct: 243 ENANPAE--SYTYSDNSGSWQSIKFDGSVDISSSSSVTSSTTSTASSASSTSSKTPSTST 300

Query: 135 LSDDTKSTP 109
           L+  TK+TP
Sbjct: 301 LATSTKATP 309



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>AGLE_RHIME (Q9Z3R5) Alpha-glucosides-binding periplasmic protein aglE|
           precursor
          Length = 458

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -1

Query: 249 LGLAAFTLLSGTATLYGTRTVSPLGEVSSSDRSLRKATLSDDTK 118
           +G+AAF LL+GTA L GT   + L      D     A+L +  K
Sbjct: 7   IGVAAFALLAGTAGLAGTAGAADLKFKPGEDSRFNWASLEEFKK 50



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>DDX54_HUMAN (Q8TDD1) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box|
           protein 54) (ATP-dependent RNA helicase DP97)
          Length = 881

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = +1

Query: 1   GRRRGESLP---AVVRRGEGREAPQGLAVLPVHHRRTDRRSALRIVGEGGLPQRPVAGAD 171
           GR+R  S P   A  RR E R+  Q   + P   +  D    L I GEGG  ++  AGA 
Sbjct: 654 GRKRQRSGPNRGAKRRREEARQRDQEFYI-PYRPKDFDSERGLSISGEGGAFEQQAAGAV 712

Query: 172 L 174
           L
Sbjct: 713 L 713



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>PSD_METCA (Q608T0) Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65)|
           [Contains: Phosphatidylserine decarboxylase alpha chain;
           Phosphatidylserine decarboxylase beta chain]
          Length = 288

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = +2

Query: 77  CYLSTTAGPIA----GVLFVSSERVAFRSDRSLELTSPKGDTVR 196
           CY  T  GP+A    G +FVSS    +      E+T P+  T+R
Sbjct: 192 CYFDTAGGPMAVILVGAIFVSSIETVWHG----EVTPPRSKTIR 231



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>NAPH_ECOLI (P33934) Ferredoxin-type protein napH|
          Length = 287

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = -1

Query: 396 SDQTTCDSAMACSRCCRDAW*LTKPMNQNSKPSSVTSWTYFCSGRC 259
           +D+  C+  M C   C +   L  P+     P  VTS      GRC
Sbjct: 221 TDRQKCNRCMDCFHVCPEPHVLRAPVLDEQSPVQVTSRDCMTCGRC 266


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,728,572
Number of Sequences: 219361
Number of extensions: 1224987
Number of successful extensions: 4331
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4331
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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