>emb|AL096699.11|HS1145L23 Human DNA sequence from clone RP5-1145L23 on chromosome Xp21.1-21.3
              Contains part of the DMD gene for dystrophin (muscular
              dystrophy, Duchenne and Becker types) and a novel gene,
              complete sequence
          Length = 203006

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 247    aaacatcatcatctgtgaaga 267
              |||||||||||||||||||||
Sbjct: 103143 aaacatcatcatctgtgaaga 103163

>dbj|BS000136.1| Pan troglodytes chromosome 22 clone:PTB-148P14, map 22, complete
             sequences
          Length = 133726

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 271   attaggagtgggagaggagga 291
             |||||||||||||||||||||
Sbjct: 80016 attaggagtgggagaggagga 79996

>emb|AL163303.2|HS21C103 Homo sapiens chromosome 21 segment HS21C103
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 271    attaggagtgggagaggagga 291
              |||||||||||||||||||||
Sbjct: 195961 attaggagtgggagaggagga 195941

>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 265     agatggattaggagtgggaga 285
               |||||||||||||||||||||
Sbjct: 1129489 agatggattaggagtgggaga 1129509

>gb|U60822.1|HSU60822 Human dystrophin (DMD) gene, exons 7, 8 and 9, and partial cds
          Length = 112359

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 247   aaacatcatcatctgtgaaga 267
             |||||||||||||||||||||
Sbjct: 41583 aaacatcatcatctgtgaaga 41563

>emb|AL592528.1|HSQ11L5 Homo sapiens chromosome 21 sequence from Cosmid q11l5 map 21q22.3
             region D21S171-LA161, complete sequence
          Length = 37428

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 271   attaggagtgggagaggagga 291
             |||||||||||||||||||||
Sbjct: 26633 attaggagtgggagaggagga 26613

>emb|AJ011931.1|HS75C10 Homo sapiens chromosome 21q22.3, PAC clone 75C10 complete sequence
             bases 1..98443
          Length = 98443

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 271   attaggagtgggagaggagga 291
             |||||||||||||||||||||
Sbjct: 84836 attaggagtgggagaggagga 84856

>gb|AC092908.9| Homo sapiens 3q BAC RP11-757I12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 174257

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   gagtgggagaggaggagtgc 295
             ||||||||||||||||||||
Sbjct: 21057 gagtgggagaggaggagtgc 21038

>emb|Z48784.1|SC9346 S.cerevisiae chromosome IV cosmid 9346
          Length = 19236

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 242   gcaccaaacatcatcatctgtgaa 265
             ||||||||||||| ||||||||||
Sbjct: 14986 gcaccaaacatcagcatctgtgaa 14963

>gb|AC100863.2| Homo sapiens chromosome 18, clone RP11-751H17, complete sequence
          Length = 175527

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 272    ttaggagtgggagaggagga 291
              ||||||||||||||||||||
Sbjct: 125356 ttaggagtgggagaggagga 125337

>gb|AF128514.1|AF128514 Laudakia tuberculata ZISP20697.1 NADH dehydrogenase subunit 1 (ND1)
            gene, partial cds; tRNA-Gln, tRNA-Ile, and tRNA-Met
            genes, complete sequence; NADH dehydrogenase subunit 2
            (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn,
            tRNA-Cys, and tRNA-Tyr genes, complete sequence; and
            cytochrome c oxidase subunit I (COI) gene, partial cds;
            mitochondrial genes for mitochondrial products
          Length = 1724

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  gtctgtggtgttgaaggcca 227
            ||||||||||||||||||||
Sbjct: 1380 gtctgtggtgttgaaggcca 1361

>gb|AC023598.30| Homo sapiens 3 BAC RP11-221E20 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 66685

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 269  ggattaggagtgggagaggaggag 292
            ||||||||| ||||||||||||||
Sbjct: 9529 ggattaggaatgggagaggaggag 9506

>gb|AC108846.15| Mus musculus chromosome 9, clone RP23-12I4, complete sequence
          Length = 212729

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    gagtgggagaggaggagtgc 295
              ||||||||||||||||||||
Sbjct: 174837 gagtgggagaggaggagtgc 174856

>gb|AC096709.19| Homo sapiens chromosome 18, clone RP11-707P24, complete sequence
          Length = 199285

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 272    ttaggagtgggagaggagga 291
              ||||||||||||||||||||
Sbjct: 170585 ttaggagtgggagaggagga 170604

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 575     cgatgtcgtcgctggatgccagca 598
               |||||||||||||||| |||||||
Sbjct: 6864783 cgatgtcgtcgctggaggccagca 6864806

>emb|AL954305.14| Zebrafish DNA sequence from clone BUSM1-189A20 in linkage group 20,
             complete sequence
          Length = 110369

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   catcatcatctgtgaagatg 269
             ||||||||||||||||||||
Sbjct: 44943 catcatcatctgtgaagatg 44924

>gb|U20087.1|MSU20087 Mus spretus P45016a-ms1 mRNA, complete cds
          Length = 1615

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 232 caccatccctgcaccaaaca 251
           ||||||||||||||||||||
Sbjct: 975 caccatccctgcaccaaaca 956

>emb|CT009609.1| Desulfococcus multivorans vrl island
          Length = 89210

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 606   cgctttcggtggtttccggt 625
             ||||||||||||||||||||
Sbjct: 80536 cgctttcggtggtttccggt 80555

>gb|AC170997.2| Mus musculus BAC clone RP24-198N9 from chromosome 9, complete sequence
          Length = 146891

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   gagtgggagaggaggagtgc 295
             ||||||||||||||||||||
Sbjct: 41407 gagtgggagaggaggagtgc 41426

>emb|AL833234.1|HSM804546 Homo sapiens mRNA; cDNA DKFZp761K1218 (from clone DKFZp761K1218)
          Length = 2901

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 380  gccgccatcagctgtgggag 399
            ||||||||||||||||||||
Sbjct: 1248 gccgccatcagctgtgggag 1267


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,097,975
Number of Sequences: 3902068
Number of extensions: 4097975
Number of successful extensions: 77966
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77895
Number of HSP's gapped (non-prelim): 71
length of query: 654
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 631
effective length of database: 17,143,297,704
effective search space: 10817420851224
effective search space used: 10817420851224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)