| Clone Name | basd1m03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 611 bits (308), Expect = e-172 Identities = 323/328 (98%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 77444 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 77385 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77384 ttaaatgtagccgataatagtggagctcgaaaattgatgtgtattcgagtcataggagct 77325 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77324 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 77265 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77264 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 77205 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77204 aaagagttcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 77145 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 ||||||||||||||||| |||||||||| Sbjct: 77144 attgatcaaaaaggcaatccaaaaggaa 77117
>ref|XM_481018.1| Oryza sativa (japonica cultivar-group), mRNA Length = 793 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 312 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 371 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 431 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 491 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 492 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 551 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 552 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 611 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 612 attgatcaaaaaggaaatccaaaaggaa 639
>ref|XM_481019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2157 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1054 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 1113 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1114 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 1173 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1174 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 1233 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1234 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 1293 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 1294 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 1353 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 1354 attgatcaaaaaggaaatccaaaaggaa 1381
>ref|XM_507181.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0036E18.24 mRNA Length = 2157 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1054 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 1113 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1114 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 1173 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1174 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 1233 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1234 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 1293 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 1294 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 1353 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 1354 attgatcaaaaaggaaatccaaaaggaa 1381
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 77671 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 77612 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 77611 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 77552 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77551 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 77492 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77491 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 77432 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 77431 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 77372 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 77371 attgatcaaaaaggaaatccaaaaggaa 77344
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 77671 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 77612 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 77611 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 77552 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77551 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 77492 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77491 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 77432 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 77431 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 77372 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 77371 attgatcaaaaaggaaatccaaaaggaa 77344
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 77612 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 77553 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 77552 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 77493 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77492 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 77433 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77432 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 77373 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 77372 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 77313 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 77312 attgatcaaaaaggaaatccaaaaggaa 77285
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 53682 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 53623 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 53622 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 53563 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53562 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 53503 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53502 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 53443 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 53442 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 53383 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 53382 attgatcaaaaaggaaatccaaaaggaa 53355
>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07, complete sequence Length = 136858 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 126510 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 126451 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 126450 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 126391 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126390 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 126331 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126330 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 126271 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 126270 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 126211 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 126210 attgatcaaaaaggaaatccaaaaggaa 126183
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 77658 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 77599 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 77598 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 77539 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77538 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 77479 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77478 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 77419 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 77418 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 77359 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 77358 attgatcaaaaaggaaatccaaaaggaa 77331
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 73122 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 73181 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 73182 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 73241 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73242 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 73301 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73302 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 73361 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 73362 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 73421 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 73422 attgatcaaaaaggaaatccaaaaggaa 73449
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 75859 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 75800 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 75799 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 75740 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75739 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 75680 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75679 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 75620 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 75619 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 75560 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 75559 attgatcaaaaaggaaatccaaaaggaa 75532
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9923 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 9864 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9863 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 9804 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9803 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 9744 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9743 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 9684 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 9683 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 9624 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 9623 attgatcaaaaaggaaatccaaaaggaa 9596
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9192049 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 9192108 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9192109 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 9192168 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9192169 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 9192228 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9192229 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 9192288 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 9192289 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 9192348 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 9192349 attgatcaaaaaggaaatccaaaaggaa 9192376 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9115096 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 9115155 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9115156 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 9115215 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9115216 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 9115275 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9115276 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 9115335 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 9115336 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 9115395 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 9115396 attgatcaaaaaggaaatccaaaaggaa 9115423 Score = 85.7 bits (43), Expect = 8e-14 Identities = 49/51 (96%) Strand = Plus / Plus Query: 195 cccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgta 245 ||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 17722502 cccaaatgcctctggaaagatccgaagtaatttgagctgtaattgtacgta 17722552 Score = 77.8 bits (39), Expect = 2e-11 Identities = 73/84 (86%), Gaps = 4/84 (4%) Strand = Plus / Minus Query: 175 tgtaatcaaagacgcattgccccaaatgcctctagaaagatccga----agtaattcgag 230 ||||| |||||| ||| ||||| ||||||||||||||||||| || ||||| |||| Sbjct: 2072786 tgtaaccaaagaagcagtgcccaaaatgcctctagaaagatcagacagaagtaagacgag 2072727 Query: 231 ctgtaattgtacgtacatgtaaag 254 |||||||||||||||||||||||| Sbjct: 2072726 ctgtaattgtacgtacatgtaaag 2072703
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5657121 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 5657062 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 5657061 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 5657002 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5657001 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 5656942 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5656941 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 5656882 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 5656881 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 5656822 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 5656821 attgatcaaaaaggaaatccaaaaggaa 5656794 Score = 202 bits (102), Expect = 5e-49 Identities = 123/130 (94%) Strand = Plus / Minus Query: 209 gaaagatccgaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaa 268 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 20514435 gaaagatccgaagtaattcgagctgtaattgtacgtacatgtaaagagttcaaatgcgaa 20514376 Query: 269 gacggtataataatccgctatgatgacaatgctgcggttataattgatcaaaaaggcaac 328 |||||||||||||| |||||||| |||||||| |||||||| |||||||||||||| || Sbjct: 20514375 gacggtataataatacgctatgacgacaatgcagcggttatcattgatcaaaaaggaaat 20514316 Query: 329 ccaaaaggaa 338 |||||||||| Sbjct: 20514315 ccaaaaggaa 20514306
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10369467 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 10369408 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 10369407 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 10369348 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10369347 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 10369288 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10369287 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 10369228 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 10369227 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 10369168 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 10369167 attgatcaaaaaggaaatccaaaaggaa 10369140 Score = 155 bits (78), Expect = 1e-34 Identities = 144/165 (87%), Gaps = 7/165 (4%) Strand = Plus / Plus Query: 102 aattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtg 161 ||||||| ||||||||| || ||||||||| ||||||| ||||||||| |||||||| Sbjct: 14021421 aattgatatgtattcgaatcttaggagctg---gtaatcactgatatgctcatattggtg 14021477 Query: 162 atgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagat----cc 217 | ||||||||||||||||||||||| ||| ||||| |||||||||||||||||| | Sbjct: 14021478 acgttattgttgctgtaatcaaagaagcagtgcccaaaatgcctctagaaagatcagaca 14021537 Query: 218 gaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaa 262 ||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 14021538 gaagtaagacgagctgtaattgtacgtacatgtaaagaactcaaa 14021582
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9259391 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 9259450 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9259451 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 9259510 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9259511 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 9259570 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9259571 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 9259630 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 9259631 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 9259690 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 9259691 attgatcaaaaaggaaatccaaaaggaa 9259718 Score = 242 bits (122), Expect = 6e-61 Identities = 158/170 (92%) Strand = Plus / Plus Query: 153 gtattggtgatgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaa 212 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 10791044 gtattggtgatgttattgttgctgtaatcaaagacgcagtgccccaaatgcctctagaaa 10791103 Query: 213 gatccgaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacg 272 |||||||||||||| ||| ||||||||||| |||||||||||| |||||||||||||| | Sbjct: 10791104 gatccgaagtaatttgaggtgtaattgtacatacatgtaaagagttcaaatgcgaagatg 10791163 Query: 273 gtataataatccgctatgatgacaatgctgcggttataattgatcaaaaa 322 |||||||||| |||||||| ||||||| | |||||| |||||||||||| Sbjct: 10791164 gtataataatacgctatgacaacaatgcagaggttatcattgatcaaaaa 10791213 Score = 83.8 bits (42), Expect = 3e-13 Identities = 73/82 (89%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 257 ttcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttataattgat 316 |||||||||||||||||||||||||| |||||||| ||| |||||||||||| |||||| Sbjct: 17206378 ttcaaatgcgaagacggtataataatacgctatgacaacagtgctgcggttatcattgat 17206319 Query: 317 caaaaaggcaacccaaaaggaa 338 ||||||| || ||||| |||| Sbjct: 17206318 -aaaaagggaatccaaatggaa 17206298
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 23181431 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 23181490 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 23181491 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 23181550 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23181551 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 23181610 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23181611 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 23181670 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 23181671 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 23181730 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 23181731 attgatcaaaaaggaaatccaaaaggaa 23181758
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 12756223 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 12756164 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12756163 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 12756104 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12756103 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 12756044 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12756043 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 12755984 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 12755983 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 12755924 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 12755923 attgatcaaaaaggaaatccaaaaggaa 12755896 Score = 531 bits (268), Expect = e-148 Identities = 313/328 (95%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 19545358 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 19545417 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 19545418 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 19545477 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19545478 gctagtaatcagcaatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 19545537 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19545538 gtgccccaaatgcctctagaaagatctcaagtaattcgagctgtaattgtacgtacatgt 19545597 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 19545598 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 19545657 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 19545658 attgatcaaaaaggaaatccaaaaggaa 19545685 Score = 351 bits (177), Expect = 9e-94 Identities = 195/201 (97%) Strand = Plus / Plus Query: 107 atgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgtt 166 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3035955 atgtgtattcgagtcataggagctgctagtaatcagcgatatgctcgtattggtgatgtt 3036014 Query: 167 attgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaatt 226 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3036015 attgttgctgtaatcaaagacgcagtgccccaaatgcctctagaaagatccgaagtaatt 3036074 Query: 227 cgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgc 286 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 3036075 cgagctgtaattgtacgtacatgtaaagagttcaaatgcgaagacggtataataatacgc 3036134 Query: 287 tatgatgacaatgctgcggtt 307 ||||| |||||||| |||||| Sbjct: 3036135 tatgacgacaatgcagcggtt 3036155 Score = 159 bits (80), Expect = 7e-36 Identities = 147/168 (87%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 123 taggagctgctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatca 182 |||| |||||| ||||||| | |||||||| ||||| ||||||||||||||||||||| | Sbjct: 3109329 taggtgctgctagtaatcaacaatatgctcatattgatgatgttattgttgctgtaatga 3109270 Query: 183 aagacgcattgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtac 242 |||| ||| ||||||||||||||||||||||| || |||||||| ||| |||||| || Sbjct: 3109269 aagatgcagtgccccaaatgcctctagaaagacccaaagtaattagagaagtaattatat 3109210 Query: 243 gtacatgtaaagaattcaaatgcgaagacggtataataatccgctatg 290 ||||||||||||| |||||||| ||| || |||||||||| ||||||| Sbjct: 3109209 gtacatgtaaagagttcaaatgtgaa-acagtataataatacgctatg 3109163 Score = 99.6 bits (50), Expect = 6e-18 Identities = 59/62 (95%) Strand = Plus / Minus Query: 19 cattgaaataacaaattgaaataaaaataatatgattcaacctcagacccttttaaatgt 78 ||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||| Sbjct: 3109425 cattgaaataacaaattgacatcaaaataatatgattcaacctcaaacccttttaaatgt 3109366 Query: 79 ag 80 || Sbjct: 3109365 ag 3109364 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 tttgcattgaaataacaaattgaaa 39 ||||||||||||| ||||||||||| Sbjct: 4108978 tttgcattgaaattacaaattgaaa 4108954
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 70604 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 70663 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 70664 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 70723 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70724 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 70783 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70784 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 70843 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 70844 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 70903 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 70904 attgatcaaaaaggaaatccaaaaggaa 70931
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 132079 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 132138 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 132139 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 132198 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132199 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 132258 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132259 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 132318 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 132319 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 132378 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 132379 attgatcaaaaaggaaatccaaaaggaa 132406
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 16193 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 16252 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 16253 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 16312 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16313 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 16372 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16373 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 16432 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 16433 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 16492 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 16493 attgatcaaaaaggaaatccaaaaggaa 16520
>dbj|AK105308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B12, full insert sequence Length = 2166 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1062 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 1121 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1122 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 1181 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1182 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 1241 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1242 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 1301 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 1302 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 1361 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 1362 attgatcaaaaaggaaatccaaaaggaa 1389
>dbj|AK071967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G06, full insert sequence Length = 1764 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1277 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 1336 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1337 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 1396 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1397 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 1456 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1457 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 1516 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 1517 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 1576 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 1577 attgatcaaaaaggaaatccaaaaggaa 1604
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10375506 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 10375447 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 10375446 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 10375387 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10375386 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 10375327 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10375326 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 10375267 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 10375266 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 10375207 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 10375206 attgatcaaaaaggaaatccaaaaggaa 10375179 Score = 155 bits (78), Expect = 1e-34 Identities = 144/165 (87%), Gaps = 7/165 (4%) Strand = Plus / Plus Query: 102 aattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtg 161 ||||||| ||||||||| || ||||||||| ||||||| ||||||||| |||||||| Sbjct: 14029663 aattgatatgtattcgaatcttaggagctg---gtaatcactgatatgctcatattggtg 14029719 Query: 162 atgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagat----cc 217 | ||||||||||||||||||||||| ||| ||||| |||||||||||||||||| | Sbjct: 14029720 acgttattgttgctgtaatcaaagaagcagtgcccaaaatgcctctagaaagatcagaca 14029779 Query: 218 gaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaa 262 ||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 14029780 gaagtaagacgagctgtaattgtacgtacatgtaaagaactcaaa 14029824
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5657114 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 5657055 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 5657054 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 5656995 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5656994 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 5656935 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5656934 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 5656875 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 5656874 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 5656815 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 5656814 attgatcaaaaaggaaatccaaaaggaa 5656787 Score = 202 bits (102), Expect = 5e-49 Identities = 123/130 (94%) Strand = Plus / Minus Query: 209 gaaagatccgaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaa 268 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 20440649 gaaagatccgaagtaattcgagctgtaattgtacgtacatgtaaagagttcaaatgcgaa 20440590 Query: 269 gacggtataataatccgctatgatgacaatgctgcggttataattgatcaaaaaggcaac 328 |||||||||||||| |||||||| |||||||| |||||||| |||||||||||||| || Sbjct: 20440589 gacggtataataatacgctatgacgacaatgcagcggttatcattgatcaaaaaggaaat 20440530 Query: 329 ccaaaaggaa 338 |||||||||| Sbjct: 20440529 ccaaaaggaa 20440520
>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159056 Score = 555 bits (280), Expect = e-155 Identities = 316/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 11644 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 11585 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 11584 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 11525 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11524 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 11465 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11464 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 11405 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 11404 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 11345 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 11344 attgatcaaaaaggaaatccaaaaggaa 11317
>ref|XM_479424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 547 bits (276), Expect = e-153 Identities = 315/328 (96%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1052 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 1111 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1112 ttaaatgtagcagataacagtggagctcaaaaattgatgtgtattcgagtcataggagct 1171 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1172 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 1231 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1232 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 1291 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 1292 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 1351 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 1352 attgatcaaaaaggaaatccaaaaggaa 1379
>ref|XM_479423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 547 bits (276), Expect = e-153 Identities = 315/328 (96%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1052 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 1111 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1112 ttaaatgtagcagataacagtggagctcaaaaattgatgtgtattcgagtcataggagct 1171 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1172 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 1231 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1232 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 1291 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 1292 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 1351 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 1352 attgatcaaaaaggaaatccaaaaggaa 1379
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 547 bits (276), Expect = e-153 Identities = 315/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 27923154 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 27923095 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 27923094 ttaaatgtagcagataacagtggagctcaaaaattgatgtgtattcgagtcataggagct 27923035 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27923034 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 27922975 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27922974 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 27922915 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 27922914 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 27922855 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 27922854 attgatcaaaaaggaaatccaaaaggaa 27922827 Score = 79.8 bits (40), Expect = 5e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 257 ttcaaatgcgaagacggtataataatccgctatgatgacaatgc 300 |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 4509007 ttcaaatgcgaagacggtataataatacgctatgatgacaatgc 4509050
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 547 bits (276), Expect = e-153 Identities = 315/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 33497437 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 33497378 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 33497377 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 33497318 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 33497317 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagatgca 33497258 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33497257 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 33497198 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 33497197 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 33497138 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 33497137 attgatcaaaaaggaaatccaaaaggaa 33497110 Score = 145 bits (73), Expect = 1e-31 Identities = 160/189 (84%) Strand = Plus / Plus Query: 145 atatgctcgtattggtgatgttattgttgctgtaatcaaagacgcattgccccaaatgcc 204 |||| ||||||||||||||||||||||||||||||| ||||| ||| || || | ||||| Sbjct: 30976271 atatactcgtattggtgatgttattgttgctgtaataaaagatgcagtgtccaagatgcc 30976330 Query: 205 tctagaaagatccgaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaatg 264 |||||||||||| ||||||| ||| |||||||||| | |||||||| || |||||||| Sbjct: 30976331 tctagaaagatcaaaagtaatacgatctgtaattgtgcatacatgtatggatttcaaatg 30976390 Query: 265 cgaagacggtataataatccgctatgatgacaatgctgcggttataattgatcaaaaagg 324 | || ||||||||||||| | |||| | ||||||| | ||||| |||||||||||||| Sbjct: 30976391 caaaaacggtataataatactctataacaacaatgcagtcgttatcattgatcaaaaagg 30976450 Query: 325 caacccaaa 333 || ||||| Sbjct: 30976451 aaatccaaa 30976459 Score = 63.9 bits (32), Expect = 3e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 228 gagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgct 287 |||| |||||||||||||||||||||||| ||||| | || ||||||| ||||| || | Sbjct: 39109204 gagcagtaattgtacgtacatgtaaagaactcaaacgtgacaacggtatgataatacgat 39109263 Query: 288 atgatgac 295 |||||||| Sbjct: 39109264 atgatgac 39109271
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 547 bits (276), Expect = e-153 Identities = 315/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 42634 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 42575 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 42574 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 42515 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 42514 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagatgca 42455 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42454 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 42395 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 42394 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 42335 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 42334 attgatcaaaaaggaaatccaaaaggaa 42307
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 547 bits (276), Expect = e-153 Identities = 315/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 86512 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 86453 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86452 ttaaatgtagcagataacagtggagctcaaaaattgatgtgtattcgagtcataggagct 86393 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86392 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 86333 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86332 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 86273 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 86272 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 86213 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 86212 attgatcaaaaaggaaatccaaaaggaa 86185
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 547 bits (276), Expect = e-153 Identities = 315/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 12488 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 12429 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 12428 ttaaatgtagcagataacagtggagctcaaaaattgatgtgtattcgagtcataggagct 12369 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12368 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 12309 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12308 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 12249 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 12248 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 12189 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 12188 attgatcaaaaaggaaatccaaaaggaa 12161
>dbj|AK063122.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-E09, full insert sequence Length = 792 Score = 547 bits (276), Expect = e-153 Identities = 315/328 (96%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 311 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 370 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 430 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 490 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 gtgctccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 550 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 551 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 610 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 611 attgatcaaaaaggaaatccaaaaggaa 638
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 547 bits (276), Expect = e-153 Identities = 315/328 (96%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 77614 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 77555 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || || ||||||||||||||||||||||||||||||||||||||| Sbjct: 77554 ttaaatgtagcagataacagcggagctcgaaaattgatgtgtattcgagtcataggagct 77495 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77494 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 77435 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77434 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 77375 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 77374 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 77315 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 77314 attgatcaaaaaggaaatccaaaaggaa 77287
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 531 bits (268), Expect = e-148 Identities = 313/328 (95%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 146070 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 146129 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 146130 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 146189 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146190 gctagtaatcagcaatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 146249 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 146250 gtgccccaaatgcctctagaaagatctcaagtaattcgagctgtaattgtacgtacatgt 146309 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 146310 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 146369 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 146370 attgatcaaaaaggaaatccaaaaggaa 146397
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 531 bits (268), Expect = e-148 Identities = 313/328 (95%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5257 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 5316 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 5317 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagct 5376 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5377 gctagtaatcagcaatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 5436 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 5437 gtgccccaaatgcctctagaaagatctcaagtaattcgagctgtaattgtacgtacatgt 5496 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 5497 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 5556 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 5557 attgatcaaaaaggaaatccaaaaggaa 5584
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 523 bits (264), Expect = e-145 Identities = 312/328 (95%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 549 tccttttgcattgaaataacaaatggaaatcaaaataatatgattcaacctcagaccctt 490 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagcc 430 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 429 gctggtaatcagcgatatgctcgtattggtgatgttattattgctgtaatcaaagacgca 370 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 369 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacacgt 310 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 |||||||||||| |||| |||||||||||||| ||||||||||||||||| || ||||| Sbjct: 309 aaagaattcaaaggcgacgacggtataataatacgctatgatgacaatgcagcagttatc 250 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 249 attgatcaaaaaggaaatccaaaaggaa 222
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 523 bits (264), Expect = e-145 Identities = 312/328 (95%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 80106 tccttttgcattgaaataacaaatggaaatcaaaataatatgattcaacctcagaccctt 80047 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 80046 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagcc 79987 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 79986 gctggtaatcagcgatatgctcgtattggtgatgttattattgctgtaatcaaagacgca 79927 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 79926 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacacgt 79867 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 |||||||||||| |||| |||||||||||||| ||||||||||||||||| || ||||| Sbjct: 79866 aaagaattcaaaggcgacgacggtataataatacgctatgatgacaatgcagcagttatc 79807 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 79806 attgatcaaaaaggaaatccaaaaggaa 79779
>ref|XM_450630.1| Oryza sativa (japonica cultivar-group), mRNA Length = 793 Score = 515 bits (260), Expect = e-143 Identities = 311/328 (94%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 312 tccttttgcattgaaataataaattgaaatcaaaataatatgattcaacctcagaccctt 371 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || | ||||||||||||||| |||||||||||||||||||||||| Sbjct: 372 ttaaatgtagcagataacactggagctcgaaaattaatgtgtattcgagtcataggagct 431 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 432 gctagtagtcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgta 491 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 492 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 551 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 552 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 611 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 612 attgatcaaaaaggaaatccaaaaggaa 639
>ref|XM_450631.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2141 Score = 515 bits (260), Expect = e-143 Identities = 311/328 (94%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 1040 tccttttgcattgaaataataaattgaaatcaaaataatatgattcaacctcagaccctt 1099 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || | ||||||||||||||| |||||||||||||||||||||||| Sbjct: 1100 ttaaatgtagcagataacactggagctcgaaaattaatgtgtattcgagtcataggagct 1159 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1160 gctagtagtcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgta 1219 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1220 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 1279 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 1280 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 1339 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 1340 attgatcaaaaaggaaatccaaaaggaa 1367
>ref|XM_506652.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1001_G09.24 mRNA Length = 1742 Score = 515 bits (260), Expect = e-143 Identities = 311/328 (94%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 1255 tccttttgcattgaaataataaattgaaatcaaaataatatgattcaacctcagaccctt 1314 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || | ||||||||||||||| |||||||||||||||||||||||| Sbjct: 1315 ttaaatgtagcagataacactggagctcgaaaattaatgtgtattcgagtcataggagct 1374 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1375 gctagtagtcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgta 1434 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1435 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 1494 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 1495 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 1554 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 1555 attgatcaaaaaggaaatccaaaaggaa 1582
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 515 bits (260), Expect = e-143 Identities = 311/328 (94%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 79448 tccttttgcattgaaataacaaatggaaatccaaataatatgattcaacctcagaccctt 79389 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 79388 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagcc 79329 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 79328 gctggtaatcagcgatatgctcgtattggtgatgttattattgctgtaatcaaagacgca 79269 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 79268 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacacgt 79209 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 |||||||||||| |||| |||||||||||||| ||||||||||||||||| || ||||| Sbjct: 79208 aaagaattcaaaggcgacgacggtataataatacgctatgatgacaatgcagcagttatc 79149 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 79148 attgatcaaaaaggaaatccaaaaggaa 79121
>emb|X06734.1|CHZMRP14 Maize chloroplast genes for ribosomal proteins L14, S8 and L16 partial Length = 1287 Score = 515 bits (260), Expect = e-143 Identities = 311/328 (94%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 221 tccttttgcattgaaataacaaatggaaatccaaataatatgattcaacctcagaccctt 280 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagcc 340 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 341 gctggtaatcagcgatatgctcgtattggtgatgttattattgctgtaatcaaagacgca 400 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 401 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacacgt 460 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 |||||||||||| |||| |||||||||||||| ||||||||||||||||| || ||||| Sbjct: 461 aaagaattcaaaggcgacgacggtataataatacgctatgatgacaatgcagcagttatc 520 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 521 attgatcaaaaaggaaatccaaaaggaa 548
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 515 bits (260), Expect = e-143 Identities = 311/328 (94%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 11896212 tccttttgcattgaaataataaattgaaatcaaaataatatgattcaacctcagaccctt 11896271 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || | ||||||||||||||| |||||||||||||||||||||||| Sbjct: 11896272 ttaaatgtagcagataacactggagctcgaaaattaatgtgtattcgagtcataggagct 11896331 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 11896332 gctagtagtcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgta 11896391 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11896392 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 11896451 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 11896452 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 11896511 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 11896512 attgatcaaaaaggaaatccaaaaggaa 11896539 Score = 91.7 bits (46), Expect = 1e-15 Identities = 74/82 (90%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 257 ttcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttataattgat 316 |||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||| Sbjct: 20862793 ttcaaatgcgaagacggtataataatacgctatgacaacaatgctgcggttatcattgat 20862734 Query: 317 caaaaaggcaacccaaaaggaa 338 ||||||| || ||||| |||| Sbjct: 20862733 -aaaaagggaatccaaatggaa 20862713 Score = 85.7 bits (43), Expect = 8e-14 Identities = 46/47 (97%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattca 57 |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 14456022 tccttttgcattgaaataacaaattgaaatcaaaataatatgattca 14456068
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 515 bits (260), Expect = e-143 Identities = 311/328 (94%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 79464 tccttttgcattgaaataacaaatggaaatccaaataatatgattcaacctcagaccctt 79405 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 79404 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagcc 79345 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 79344 gctggtaatcagcgatatgctcgtattggtgatgttattattgctgtaatcaaagacgca 79285 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 79284 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacacgt 79225 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 |||||||||||| |||| |||||||||||||| ||||||||||||||||| || ||||| Sbjct: 79224 aaagaattcaaaggcgacgacggtataataatacgctatgatgacaatgcagcagttatc 79165 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 79164 attgatcaaaaaggaaatccaaaaggaa 79137
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 515 bits (260), Expect = e-143 Identities = 311/328 (94%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 77702 tccttttgcattgaaataataaattgaaatcaaaataatatgattcaacctcagaccctt 77761 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || | ||||||||||||||| |||||||||||||||||||||||| Sbjct: 77762 ttaaatgtagcagataacactggagctcgaaaattaatgtgtattcgagtcataggagct 77821 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 77822 gctagtagtcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgta 77881 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77882 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 77941 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 77942 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 78001 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 78002 attgatcaaaaaggaaatccaaaaggaa 78029
>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0441A12 Length = 185437 Score = 515 bits (260), Expect = e-143 Identities = 311/328 (94%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 692 tccttttgcattgaaataataaattgaaatcaaaataatatgattcaacctcagaccctt 751 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || | ||||||||||||||| |||||||||||||||||||||||| Sbjct: 752 ttaaatgtagcagataacactggagctcgaaaattaatgtgtattcgagtcataggagct 811 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 812 gctagtagtcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgta 871 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 872 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 931 Query: 251 aaagaattcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttata 310 ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 932 aaagagttcaaatgcgaagacggtataataatacgctatgacgacaatgcagcggttatc 991 Query: 311 attgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| || |||||||||| Sbjct: 992 attgatcaaaaaggaaatccaaaaggaa 1019
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 488 bits (246), Expect = e-135 Identities = 270/278 (97%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 14594 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 14535 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 14534 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataagagct 14475 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14474 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 14415 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14414 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 14355 Query: 251 aaagaattcaaatgcgaagacggtataataatccgcta 288 ||||| |||||||||||||||||||||||||| ||||| Sbjct: 14354 aaagagttcaaatgcgaagacggtataataatacgcta 14317
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 488 bits (246), Expect = e-135 Identities = 270/278 (97%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 24638408 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 24638349 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 24638348 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataagagct 24638289 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24638288 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 24638229 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24638228 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 24638169 Query: 251 aaagaattcaaatgcgaagacggtataataatccgcta 288 ||||| |||||||||||||||||||||||||| ||||| Sbjct: 24638168 aaagagttcaaatgcgaagacggtataataatacgcta 24638131 Score = 454 bits (229), Expect = e-125 Identities = 268/281 (95%) Strand = Plus / Minus Query: 18 gcattgaaataacaaattgaaataaaaataatatgattcaacctcagacccttttaaatg 77 |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 32000719 gcattgaaataacaaattaaaatcaaaataatatgattcaacctcagacccttttaaatg 32000660 Query: 78 tagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagctgctggta 137 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 32000659 tagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagctgctagta 32000600 Query: 138 atcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgcattgcccc 197 |||||||||||||||||||||||||||||||| |||||||||||||||||||| || || Sbjct: 32000599 atcagcgatatgctcgtattggtgatgttattattgctgtaatcaaagacgcagtgtcct 32000540 Query: 198 aaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgtaaagaat 257 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 32000539 aaatgcctctagaaagatccgaagtaattcgagctataattgtacgtacatgtaaagaat 32000480 Query: 258 tcaaatgcgaagacggtataataatccgctatgatgacaat 298 ||||||||||||||||||||||||| |||||| | |||||| Sbjct: 32000479 tcaaatgcgaagacggtataataatacgctataacgacaat 32000439 Score = 75.8 bits (38), Expect = 8e-11 Identities = 72/82 (87%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 257 ttcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttataattgat 316 ||||||||||||||| |||||||||| |||||||| |||| |||| ||||||| |||||| Sbjct: 27557569 ttcaaatgcgaagacagtataataatacgctatgacgacagtgctacggttatcattgat 27557510 Query: 317 caaaaaggcaacccaaaaggaa 338 ||||||| || ||||| |||| Sbjct: 27557509 -aaaaaggaaatccaaatggaa 27557489
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136470 Score = 488 bits (246), Expect = e-135 Identities = 270/278 (97%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 70454 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 70395 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 70394 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataagagct 70335 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70334 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 70275 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70274 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 70215 Query: 251 aaagaattcaaatgcgaagacggtataataatccgcta 288 ||||| |||||||||||||||||||||||||| ||||| Sbjct: 70214 aaagagttcaaatgcgaagacggtataataatacgcta 70177
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 488 bits (246), Expect = e-135 Identities = 270/278 (97%) Strand = Plus / Minus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctt 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 24555877 tccttttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagaccctt 24555818 Query: 71 ttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagct 130 |||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 24555817 ttaaatgtagcagataacagtggagctcgaaaattgatgtgtattcgagtcataagagct 24555758 Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24555757 gctagtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgca 24555698 Query: 191 ttgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24555697 gtgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgt 24555638 Query: 251 aaagaattcaaatgcgaagacggtataataatccgcta 288 ||||| |||||||||||||||||||||||||| ||||| Sbjct: 24555637 aaagagttcaaatgcgaagacggtataataatacgcta 24555600 Score = 454 bits (229), Expect = e-125 Identities = 268/281 (95%) Strand = Plus / Minus Query: 18 gcattgaaataacaaattgaaataaaaataatatgattcaacctcagacccttttaaatg 77 |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 32091231 gcattgaaataacaaattaaaatcaaaataatatgattcaacctcagacccttttaaatg 32091172 Query: 78 tagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagctgctggta 137 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 32091171 tagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagctgctagta 32091112 Query: 138 atcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgcattgcccc 197 |||||||||||||||||||||||||||||||| |||||||||||||||||||| || || Sbjct: 32091111 atcagcgatatgctcgtattggtgatgttattattgctgtaatcaaagacgcagtgtcct 32091052 Query: 198 aaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgtaaagaat 257 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 32091051 aaatgcctctagaaagatccgaagtaattcgagctataattgtacgtacatgtaaagaat 32090992 Query: 258 tcaaatgcgaagacggtataataatccgctatgatgacaat 298 ||||||||||||||||||||||||| |||||| | |||||| Sbjct: 32090991 tcaaatgcgaagacggtataataatacgctataacgacaat 32090951 Score = 75.8 bits (38), Expect = 8e-11 Identities = 72/82 (87%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 257 ttcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttataattgat 316 ||||||||||||||| |||||||||| |||||||| |||| |||| ||||||| |||||| Sbjct: 27648892 ttcaaatgcgaagacagtataataatacgctatgacgacagtgctacggttatcattgat 27648833 Query: 317 caaaaaggcaacccaaaaggaa 338 ||||||| || ||||| |||| Sbjct: 27648832 -aaaaaggaaatccaaatggaa 27648812
>ref|NM_190859.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 372 Score = 478 bits (241), Expect = e-132 Identities = 277/289 (95%) Strand = Plus / Plus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgatg 109 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1 atgattcaacctcagacccttttaaatgtagcagataacagtggagctcgaaaattgatg 60 Query: 110 tgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgttatt 169 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 61 tgtattcgagtcataggagctgctagtaatcagcgatatgctcgtattggtgatgttatt 120 Query: 170 gttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaattcga 229 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 121 gttgctgtaatcaaagatgcagtgccccaaatgcctctagaaagatccgaagtaattcga 180 Query: 230 gctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgctat 289 |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 181 gctgtaattgtacgtacatgtaaagagttcaaatgcgaagacggtataataatacgctat 240 Query: 290 gatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 || |||||||| |||||||| |||||||||||||| || |||||||||| Sbjct: 241 gacgacaatgcagcggttatcattgatcaaaaaggaaatccaaaaggaa 289
>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete sequence Length = 144306 Score = 454 bits (229), Expect = e-125 Identities = 268/281 (95%) Strand = Plus / Minus Query: 18 gcattgaaataacaaattgaaataaaaataatatgattcaacctcagacccttttaaatg 77 |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 92671 gcattgaaataacaaattaaaatcaaaataatatgattcaacctcagacccttttaaatg 92612 Query: 78 tagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagctgctggta 137 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 92611 tagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagctgctagta 92552 Query: 138 atcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgcattgcccc 197 |||||||||||||||||||||||||||||||| |||||||||||||||||||| || || Sbjct: 92551 atcagcgatatgctcgtattggtgatgttattattgctgtaatcaaagacgcagtgtcct 92492 Query: 198 aaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgtaaagaat 257 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 92491 aaatgcctctagaaagatccgaagtaattcgagctataattgtacgtacatgtaaagaat 92432 Query: 258 tcaaatgcgaagacggtataataatccgctatgatgacaat 298 ||||||||||||||||||||||||| |||||| | |||||| Sbjct: 92431 tcaaatgcgaagacggtataataatacgctataacgacaat 92391
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 454 bits (229), Expect = e-125 Identities = 268/281 (95%) Strand = Plus / Minus Query: 18 gcattgaaataacaaattgaaataaaaataatatgattcaacctcagacccttttaaatg 77 |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 1844 gcattgaaataacaaattaaaatcaaaataatatgattcaacctcagacccttttaaatg 1785 Query: 78 tagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagctgctggta 137 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1784 tagcagataacagtggagctcgaaaattgatgtgtattcgagtcataggagctgctagta 1725 Query: 138 atcagcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgcattgcccc 197 |||||||||||||||||||||||||||||||| |||||||||||||||||||| || || Sbjct: 1724 atcagcgatatgctcgtattggtgatgttattattgctgtaatcaaagacgcagtgtcct 1665 Query: 198 aaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgtaaagaat 257 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1664 aaatgcctctagaaagatccgaagtaattcgagctataattgtacgtacatgtaaagaat 1605 Query: 258 tcaaatgcgaagacggtataataatccgctatgatgacaat 298 ||||||||||||||||||||||||| |||||| | |||||| Sbjct: 1604 tcaaatgcgaagacggtataataatacgctataacgacaat 1564
>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0059G01, complete sequence Length = 141661 Score = 351 bits (177), Expect = 9e-94 Identities = 195/201 (97%) Strand = Plus / Plus Query: 107 atgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgtt 166 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 23199 atgtgtattcgagtcataggagctgctagtaatcagcgatatgctcgtattggtgatgtt 23258 Query: 167 attgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaatt 226 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 23259 attgttgctgtaatcaaagacgcagtgccccaaatgcctctagaaagatccgaagtaatt 23318 Query: 227 cgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgc 286 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 23319 cgagctgtaattgtacgtacatgtaaagagttcaaatgcgaagacggtataataatacgc 23378 Query: 287 tatgatgacaatgctgcggtt 307 ||||| |||||||| |||||| Sbjct: 23379 tatgacgacaatgcagcggtt 23399 Score = 159 bits (80), Expect = 7e-36 Identities = 147/168 (87%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 123 taggagctgctggtaatcagcgatatgctcgtattggtgatgttattgttgctgtaatca 182 |||| |||||| ||||||| | |||||||| ||||| ||||||||||||||||||||| | Sbjct: 96573 taggtgctgctagtaatcaacaatatgctcatattgatgatgttattgttgctgtaatga 96514 Query: 183 aagacgcattgccccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtac 242 |||| ||| ||||||||||||||||||||||| || |||||||| ||| |||||| || Sbjct: 96513 aagatgcagtgccccaaatgcctctagaaagacccaaagtaattagagaagtaattatat 96454 Query: 243 gtacatgtaaagaattcaaatgcgaagacggtataataatccgctatg 290 ||||||||||||| |||||||| ||| || |||||||||| ||||||| Sbjct: 96453 gtacatgtaaagagttcaaatgtgaa-acagtataataatacgctatg 96407 Score = 99.6 bits (50), Expect = 6e-18 Identities = 59/62 (95%) Strand = Plus / Minus Query: 19 cattgaaataacaaattgaaataaaaataatatgattcaacctcagacccttttaaatgt 78 ||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||| Sbjct: 96669 cattgaaataacaaattgacatcaaaataatatgattcaacctcaaacccttttaaatgt 96610 Query: 79 ag 80 || Sbjct: 96609 ag 96608
>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16, complete sequence Length = 159525 Score = 351 bits (177), Expect = 9e-94 Identities = 195/201 (97%) Strand = Plus / Plus Query: 107 atgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgtt 166 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 129971 atgtgtattcgagtcataggagctgctagtaatcagcgatatgctcgtattggtgatgtt 130030 Query: 167 attgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaatt 226 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 130031 attgttgctgtaatcaaagacgcagtgccccaaatgcctctagaaagatccgaagtaatt 130090 Query: 227 cgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgc 286 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 130091 cgagctgtaattgtacgtacatgtaaagagttcaaatgcgaagacggtataataatacgc 130150 Query: 287 tatgatgacaatgctgcggtt 307 ||||| |||||||| |||||| Sbjct: 130151 tatgacgacaatgcagcggtt 130171
>gb|DQ069425.1| Typha latifolia ribosomal protein L14 (rpl14) gene, partial cds; chloroplast Length = 366 Score = 315 bits (159), Expect = 5e-83 Identities = 257/289 (88%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgatg 109 ||||||||||||||||||||||| |||||||| || || || |||||||||||||| ||| Sbjct: 1 atgattcaacctcagacccttttgaatgtagcggataacagcggagctcgaaaattaatg 60 Query: 110 tgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgttatt 169 ||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| Sbjct: 61 tgtattcgaatcataggagctg---gtaatcaccgatatgctcatattggtgatgttatt 117 Query: 170 gttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaattcga 229 ||||||||||||||||| ||| | ||| | ||||||||||||||||| ||||||||| || Sbjct: 118 gttgctgtaatcaaagaagcagttcccaatatgcctctagaaagatcagaagtaattaga 177 Query: 230 gctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgctat 289 ||||||||||||||||||||||||||| ||||| | ||| ||||||| ||||| || ||| Sbjct: 178 gctgtaattgtacgtacatgtaaagaactcaaacgtgaaaacggtatcataatacgatat 237 Query: 290 gatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| ||| | ||||||||| |||| || |||||||||| Sbjct: 238 gatgacaatgctgcagttgtcattgatcaagaaggaaatccaaaaggaa 286
>gb|DQ069426.1| Yucca schidigera ribosomal protein L14 (rpl14) gene, partial cds; chloroplast Length = 366 Score = 307 bits (155), Expect = 1e-80 Identities = 256/289 (88%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgatg 109 |||||||||||||| |||||||| ||||||||||| || || ||||||||| |||||||| Sbjct: 1 atgattcaacctcaaacccttttgaatgtagcagataacagcggagctcgagaattgatg 60 Query: 110 tgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgttatt 169 ||||||||| ||||||| |||| ||||||| |||||||||| ||||||||| |||||| Sbjct: 61 tgtattcgaatcataggggctg---gtaatcaccgatatgctcatattggtgacgttatt 117 Query: 170 gttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaattcga 229 ||||||||||||||||| ||| ||||| | ||||||||||||||||| ||||||||| || Sbjct: 118 gttgctgtaatcaaagaagcagtgcccaatatgcctctagaaagatcagaagtaattaga 177 Query: 230 gctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgctat 289 ||||||||||||||||||||||||||| ||||| | || ||||||| ||||| || ||| Sbjct: 178 gctgtaattgtacgtacatgtaaagaactcaaacgtgacaacggtatgataatacgatat 237 Query: 290 gatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 ||||||||||| |||||| | ||||||||| |||| ||||||||||||| Sbjct: 238 gatgacaatgcagcggttgtcattgatcaagaaggaaacccaaaaggaa 286
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 285 bits (144), Expect = 5e-74 Identities = 275/318 (86%), Gaps = 3/318 (0%) Strand = Plus / Minus Query: 21 ttgaaataacaaattgaaataaaaataatatgattcaacctcagacccttttaaatgtag 80 ||||||||| | ||| || ||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 82979 ttgaaataagagattaaattaaaaatgatatgattcaacctcagacccttttgaatgtag 82920 Query: 81 cagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagctgctggtaatc 140 | || || |||||||||| |||||| |||||||||||| |||||||| ||| |||||| Sbjct: 82919 cggataacagtggagctcaaaaattaatgtgtattcgaatcataggaactg---gtaatc 82863 Query: 141 agcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgcattgccccaaa 200 | |||||||||| | |||| |||||||||||||||||||||||||| ||| ||||| | | Sbjct: 82862 accgatatgctcatcttggcgatgttattgttgctgtaatcaaagaagcagtgcccaaca 82803 Query: 201 tgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgtaaagaattca 260 |||||||||||||||| ||| ||||| ||||||| |||||||| |||||||||||| ||| Sbjct: 82802 tgcctctagaaagatcagaaataattagagctgtgattgtacgcacatgtaaagaactca 82743 Query: 261 aatgcgaagacggtataataatccgctatgatgacaatgctgcggttataattgatcaaa 320 || | || |||| || ||||| || |||||||||||||| |||||||| ||||||||| Sbjct: 82742 aacgtgacaacggcatgataatacgatatgatgacaatgcagcggttatcattgatcaag 82683 Query: 321 aaggcaacccaaaaggaa 338 |||| || |||||||||| Sbjct: 82682 aaggaaatccaaaaggaa 82665
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 262 bits (132), Expect = 7e-67 Identities = 257/298 (86%), Gaps = 3/298 (1%) Strand = Plus / Minus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 |||||| ||||||||||||||||||||| ||| |||||||| ||||| || || |||||| Sbjct: 82296 aaaaatgatatgattcaacctcagacccatttgaatgtagcggacaacagcggggctcga 82237 Query: 101 aaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggt 160 |||||||||| |||||| ||||||| ||| |||||| |||||||||| ||| ||| Sbjct: 82236 gaattgatgtgcattcgaatcataggggcta---gtaatcgccgatatgctcatatcggt 82180 Query: 161 gatgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaa 220 || ||||||||||||||||||||||| ||| ||||| | |||||||| |||||||| ||| Sbjct: 82179 gacgttattgttgctgtaatcaaagaagcagtgcccaatatgcctctcgaaagatcagaa 82120 Query: 221 gtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataata 280 || ||||||||||||||||||||||||||||||||| ||||| |||| ||||||| ||| Sbjct: 82119 gttattcgagctgtaattgtacgtacatgtaaagaactcaaacgcgacaacggtatgata 82060 Query: 281 atccgctatgatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 || || |||||||||||||| || ||| | ||||||||| |||| || |||||||||| Sbjct: 82059 atacgatatgatgacaatgcggcagttgtcattgatcaagaaggaaatccaaaaggaa 82002
>gb|DQ069423.1| Nuphar advena ribosomal protein L14 (rpl14) gene, partial cds; chloroplast Length = 366 Score = 248 bits (125), Expect = 1e-62 Identities = 247/287 (86%), Gaps = 3/287 (1%) Strand = Plus / Plus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgatg 109 ||||||||||||||||||| ||| |||||||| ||||| || |||||||||||| ||||| Sbjct: 1 atgattcaacctcagacccatttgaatgtagcggacaacagcggagctcgaaaactgatg 60 Query: 110 tgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgttatt 169 ||||||||| ||||||||||| ||||| | |||||||||| ||| ||||| |||||| Sbjct: 61 tgtattcgaatcataggagcta---gtaattaccgatatgctcatatcggtgacgttatt 117 Query: 170 gttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaattcga 229 ||||||||||||||||| ||| |||| | ||||| || |||||||| |||||||| || Sbjct: 118 gttgctgtaatcaaagaagcagtgccaaatatgcccctggaaagatcagaagtaatcaga 177 Query: 230 gctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgctat 289 ||||||||||||||||||||||||||| ||||| |||| ||||||| ||||| || ||| Sbjct: 178 gctgtaattgtacgtacatgtaaagaactcaaacgcgacaacggtatgataatacggtat 237 Query: 290 gatgacaatgctgcggttataattgatcaaaaaggcaacccaaaagg 336 ||||||||||| || ||| | ||||||||| |||| || |||||||| Sbjct: 238 gatgacaatgcagcagttgtcattgatcaagaaggaaatccaaaagg 284
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 246 bits (124), Expect = 4e-62 Identities = 255/298 (85%), Gaps = 3/298 (1%) Strand = Plus / Minus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 |||||| |||||||||||||||||||||||||||||||||| || || || || |||||| Sbjct: 80815 aaaaatgatatgattcaacctcagacccttttaaatgtagcggataacagcggggctcga 80756 Query: 101 aaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggt 160 ||||||||||||||||| |||||||||| |||||| |||||||||| ||||||| Sbjct: 80755 gaattgatgtgtattcgaatcataggagcca---gtaatcgccgatatgctcatattggt 80699 Query: 161 gatgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaa 220 || ||||||||||||||||||||||| ||| | ||| | ||| ||||||||||||| ||| Sbjct: 80698 gacgttattgttgctgtaatcaaagaagcagtacccaatatgtctctagaaagatcagaa 80639 Query: 221 gtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataata 280 || | ||||||||||||||||||||||||||||| ||||| | || ||||||| ||| Sbjct: 80638 gtggtcagagctgtaattgtacgtacatgtaaagaactcaaacgtgacaacggtatgata 80579 Query: 281 atccgctatgatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 || || |||||||||||||| || ||| | ||||||||| |||| || |||||||||| Sbjct: 80578 atacgatatgatgacaatgcagcagttgtcattgatcaagaagggaatccaaaaggaa 80521
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 242 bits (122), Expect = 6e-61 Identities = 256/300 (85%), Gaps = 3/300 (1%) Strand = Plus / Minus Query: 37 aaataaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 96 |||||||| || ||||||||||||||||||||||| |||||||| ||||| || ||||| Sbjct: 86992 aaataaaagaaagatgattcaacctcagacccttttgaatgtagcggacaacagcggagc 86933 Query: 97 tcgaaaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtat 156 |||||| | |||||||||||| ||||||||||| ||||| | |||||||||| ||| Sbjct: 86932 ccgaaaacttatgtgtattcgaatcataggagcta---gtaattaccgatatgctcatat 86876 Query: 157 tggtgatgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatc 216 ||||| ||||||||||||||||||||||| ||| |||| | ||||| || |||||||| Sbjct: 86875 cggtgacgttattgttgctgtaatcaaagaagcagtgccaaatatgcccctggaaagatc 86816 Query: 217 cgaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtat 276 |||||||| ||||||||||||||||||||||||||||| |||| |||| ||||||| Sbjct: 86815 agaagtaatcagagctgtaattgtacgtacatgtaaagaactcaagcgcgacaacggtat 86756 Query: 277 aataatccgctatgatgacaatgctgcggttataattgatcaaaaaggcaacccaaaagg 336 |||||||| |||||||||||||| || ||| | ||||||||| |||| || |||||||| Sbjct: 86755 gataatccggtatgatgacaatgcagcagttgtcattgatcaagaaggaaatccaaaagg 86696
>dbj|AP004556.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0026A08 Length = 171272 Score = 242 bits (122), Expect = 6e-61 Identities = 158/170 (92%) Strand = Plus / Plus Query: 153 gtattggtgatgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaa 212 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 4829 gtattggtgatgttattgttgctgtaatcaaagacgcagtgccccaaatgcctctagaaa 4888 Query: 213 gatccgaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacg 272 |||||||||||||| ||| ||||||||||| |||||||||||| |||||||||||||| | Sbjct: 4889 gatccgaagtaatttgaggtgtaattgtacatacatgtaaagagttcaaatgcgaagatg 4948 Query: 273 gtataataatccgctatgatgacaatgctgcggttataattgatcaaaaa 322 |||||||||| |||||||| ||||||| | |||||| |||||||||||| Sbjct: 4949 gtataataatacgctatgacaacaatgcagaggttatcattgatcaaaaa 4998
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 242 bits (122), Expect = 6e-61 Identities = 158/170 (92%) Strand = Plus / Plus Query: 153 gtattggtgatgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaa 212 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 88176 gtattggtgatgttattgttgctgtaatcaaagacgcagtgccccaaatgcctctagaaa 88235 Query: 213 gatccgaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacg 272 |||||||||||||| ||| ||||||||||| |||||||||||| |||||||||||||| | Sbjct: 88236 gatccgaagtaatttgaggtgtaattgtacatacatgtaaagagttcaaatgcgaagatg 88295 Query: 273 gtataataatccgctatgatgacaatgctgcggttataattgatcaaaaa 322 |||||||||| |||||||| ||||||| | |||||| |||||||||||| Sbjct: 88296 gtataataatacgctatgacaacaatgcagaggttatcattgatcaaaaa 88345
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 240 bits (121), Expect = 2e-60 Identities = 148/157 (94%) Strand = Plus / Plus Query: 14 ttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctttta 73 ||||||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||||| Sbjct: 24916670 ttttgcattgaaatagcaaattgaaatcaaaataatataatttaacctcagaccctttta 24916729 Query: 74 aatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagctgct 133 ||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 24916730 aatgtagcagataatagtggagctcgaaaattaatgtgtattcaagtcataggagctgct 24916789 Query: 134 ggtaatcagcgatatgctcgtattggtgatgttattg 170 ||||||||||||||||||||||||||||||| |||| Sbjct: 24916790 agtaatcagcgatatgctcgtattggtgatgtaattg 24916826 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 290 gatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 ||||||||||| ||||||| |||| ||||||| | || |||||||||| Sbjct: 20875118 gatgacaatgcaacggttatcattggtcaaaaaagaaatccaaaaggaa 20875070 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 aataacaaattgaaataaaaataa 48 ||||| |||||||||||||||||| Sbjct: 26626259 aataaaaaattgaaataaaaataa 26626236
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 240 bits (121), Expect = 2e-60 Identities = 148/157 (94%) Strand = Plus / Plus Query: 14 ttttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagaccctttta 73 ||||||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||||| Sbjct: 77953 ttttgcattgaaatagcaaattgaaatcaaaataatataatttaacctcagaccctttta 78012 Query: 74 aatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagtcataggagctgct 133 ||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 78013 aatgtagcagataatagtggagctcgaaaattaatgtgtattcaagtcataggagctgct 78072 Query: 134 ggtaatcagcgatatgctcgtattggtgatgttattg 170 ||||||||||||||||||||||||||||||| |||| Sbjct: 78073 agtaatcagcgatatgctcgtattggtgatgtaattg 78109
>gb|DQ069421.1| Acorus americanus ribosomal protein L14 (rpl14) gene, partial cds; chloroplast Length = 366 Score = 236 bits (119), Expect = 4e-59 Identities = 247/289 (85%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgatg 109 |||||||||||||||||||||||||||||||| || || || || |||||| |||||||| Sbjct: 1 atgattcaacctcagacccttttaaatgtagcggataacagcggggctcgagaattgatg 60 Query: 110 tgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgttatt 169 ||||||||| |||||||||| |||||| |||||||||| ||||||||| |||||| Sbjct: 61 tgtattcgaatcataggagcca---gtaatcgccgatatgctcatattggtgacgttatt 117 Query: 170 gttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaattcga 229 ||||||||||||||||| ||| | ||| | ||| ||||||||||||| ||||| | || Sbjct: 118 gttgctgtaatcaaagaagcagtacccaatatgtctctagaaagatcagaagtggtcaga 177 Query: 230 gctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgctat 289 ||||||||||||||||||||||||||| ||||| | || ||||||| ||||| || ||| Sbjct: 178 gctgtaattgtacgtacatgtaaagaactcaaacgtgacaacggtatgataatacgatat 237 Query: 290 gatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 ||||||||||| || ||| | ||||||||| |||| || |||||||||| Sbjct: 238 gatgacaatgcagcagttgtcattgatcaagaagggaatccaaaaggaa 286
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 230 bits (116), Expect = 2e-57 Identities = 253/298 (84%), Gaps = 3/298 (1%) Strand = Plus / Minus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 |||||| ||||||||||||| ||||||| ||| |||||||| ||||| || || || ||| Sbjct: 85919 aaaaatgatatgattcaaccccagacccatttgaatgtagcggacaacagcggggcccga 85860 Query: 101 aaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggt 160 ||||||||||||||||| |||||||| || |||||| ||||| |||| ||||||| Sbjct: 85859 gaattgatgtgtattcgaatcataggaacta---gtaatcgccgatacgctcatattggt 85803 Query: 161 gatgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaa 220 || |||||||||||||| |||||||| | | | || | ||||||||||||||||| ||| Sbjct: 85802 gacgttattgttgctgtgatcaaagaagtagtaccaaatatgcctctagaaagatcagaa 85743 Query: 221 gtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataata 280 ||||| ||||||||||||||||||| ||||||||| ||||| | || ||||||| ||| Sbjct: 85742 gtaatcagagctgtaattgtacgtacctgtaaagaactcaaacgtgacaacggtatgata 85683 Query: 281 atccgctatgatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 || || ||||||||||||||||| ||||| ||||||||| |||| ||||||||||||| Sbjct: 85682 atacgatatgatgacaatgctgcagttattattgatcaagaaggaaacccaaaaggaa 85625
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 226 bits (114), Expect = 4e-56 Identities = 248/292 (84%), Gaps = 3/292 (1%) Strand = Plus / Minus Query: 47 aatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattg 106 |||||||||||||||||||||| ||| |||||||||||||| || || |||||| ||||| Sbjct: 79607 aatatgattcaacctcagacccatttgaatgtagcagacaacagcggggctcgagaattg 79548 Query: 107 atgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgtt 166 |||||||||||| ||||||||||| | || | |||||||||||||||||||| ||| Sbjct: 79547 atgtgtattcgaatcataggagcta---gcaaccgtcgatatgctcgtattggtgacgtt 79491 Query: 167 attgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaatt 226 ||||||||||| |||||||| ||| | ||| | | ||| |||||||||| ||||| || Sbjct: 79490 attgttgctgtgatcaaagaagcaatccccaacacgcccttagaaagatcagaagtgatc 79431 Query: 227 cgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgc 286 |||||||| |||||||||| ||||||||| | ||| |||| ||||||| ||||| || Sbjct: 79430 agagctgtagttgtacgtacttgtaaagaactaaaacgcgacaacggtatgataatacga 79371 Query: 287 tatgatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 ||||||||||||||||| ||||| ||||||||| |||| || |||||||||| Sbjct: 79370 tatgatgacaatgctgcagttatcattgatcaagaaggaaatccaaaaggaa 79319
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 222 bits (112), Expect = 6e-55 Identities = 252/298 (84%), Gaps = 3/298 (1%) Strand = Plus / Minus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 |||||| ||||||||||||||||||||| ||| ||||||||||| || || || |||||| Sbjct: 80460 aaaaatgatatgattcaacctcagacccatttgaatgtagcagataacagcggggctcga 80401 Query: 101 aaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggt 160 ||||||||||||||||| ||||||||||| | |||| |||||||||| ||||||| Sbjct: 80400 gaattgatgtgtattcgaatcataggagcta---gcaatcgtcgatatgctcatattggt 80344 Query: 161 gatgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaa 220 || |||||||||||||| |||||||||||| | || | ||||||||||||||||| ||| Sbjct: 80343 gacgttattgttgctgtgatcaaagacgcagttccaaacatgcctctagaaagatcagaa 80284 Query: 221 gtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataata 280 || | ||||||||||||| ||||| ||||||||| | ||| | || ||||||| ||| Sbjct: 80283 gtggtcagagctgtaattgtccgtacttgtaaagaacttaaacgtgacaacggtatgata 80224 Query: 281 atccgctatgatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 || || ||||||||||||||||| ||| | ||||||||| |||| || |||||||||| Sbjct: 80223 atacgatatgatgacaatgctgcagttgtgattgatcaagaaggaaatccaaaaggaa 80166
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 220 bits (111), Expect = 2e-54 Identities = 245/289 (84%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgatg 109 ||||||||||||||||||| |||||||||||| || ||||| || |||||| |||||||| Sbjct: 82725 atgattcaacctcagacccatttaaatgtagcggataatagcggggctcgagaattgatg 82666 Query: 110 tgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgttatt 169 ||||||||| ||||||||||| | |||| |||||||||| ||||||||| |||||| Sbjct: 82665 tgtattcgaatcataggagcta---gcaatcgtcgatatgctcatattggtgacgttatt 82609 Query: 170 gttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaattcga 229 |||||||| |||||||| ||| | || | ||||| ||||||||||| |||||| | || Sbjct: 82608 gttgctgtgatcaaagaagcagtaccaaatatgcccctagaaagatcagaagtagtcaga 82549 Query: 230 gctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgctat 289 ||||||||||| ||||| ||||||||| ||||| | || |||| || |||||||| ||| Sbjct: 82548 gctgtaattgtgcgtacctgtaaagaactcaaacgtgacaacgggatgataatccgatat 82489 Query: 290 gatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| ||| | ||||||||| |||| || |||||||||| Sbjct: 82488 gatgacaatgctgcagttgttattgatcaagaaggaaatccaaaaggaa 82440
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 214 bits (108), Expect = 1e-52 Identities = 251/298 (84%), Gaps = 3/298 (1%) Strand = Plus / Minus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 |||||| ||||||||||||||||||||| ||| ||||||||||| || || || |||||| Sbjct: 81014 aaaaatgatatgattcaacctcagacccatttgaatgtagcagataacagcggggctcga 80955 Query: 101 aaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggt 160 ||||||||||||||||| ||||||||||| | |||| |||||||||| ||||||| Sbjct: 80954 gaattgatgtgtattcgaatcataggagcta---gcaatcgccgatatgctcatattggt 80898 Query: 161 gatgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaa 220 || |||||||||||||| |||||||||||| | || | ||||||||||||||||| ||| Sbjct: 80897 gacgttattgttgctgtgatcaaagacgcagttccaaacatgcctctagaaagatcagaa 80838 Query: 221 gtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataata 280 || | ||||||||||||| ||||| ||||||||| | ||| | || ||||||| ||| Sbjct: 80837 gtggtcagagctgtaattgtccgtacttgtaaagaacttaaacgtgacaacggtatgata 80778 Query: 281 atccgctatgatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 || || |||||||||||||| || ||| | ||||||||| |||| || |||||||||| Sbjct: 80777 atacgatatgatgacaatgccgcagttgtgattgatcaagaaggaaatccaaaaggaa 80720
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 214 bits (108), Expect = 1e-52 Identities = 251/298 (84%), Gaps = 3/298 (1%) Strand = Plus / Minus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 |||||| ||||||||||||||||||||||||| |||||||| || || || || |||||| Sbjct: 83045 aaaaatgatatgattcaacctcagacccttttgaatgtagcggataacagcggggctcga 82986 Query: 101 aaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggt 160 ||||||||||||||||| ||||||||||| | |||| |||||||||| ||| ||| Sbjct: 82985 gaattgatgtgtattcgaatcataggagcta---gcaatcgtcgatatgctcatatcggt 82929 Query: 161 gatgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaa 220 || |||||||||||||| |||||||| ||| |||| | ||||| |||| |||||| ||| Sbjct: 82928 gacgttattgttgctgtgatcaaagaagcagtgccaaacatgcccctagcaagatcagaa 82869 Query: 221 gtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataata 280 || | ||||||||||||||||||| ||||||||| ||||| | || ||||||| ||| Sbjct: 82868 gtggtcagagctgtaattgtacgtacttgtaaagaactcaaacgtgataacggtatgata 82809 Query: 281 atccgctatgatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 || || ||||||||||||||||||||| | || |||||| |||| |||||||| |||| Sbjct: 82808 atacgatatgatgacaatgctgcggttgtcatcgatcaagaaggaaacccaaagggaa 82751
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 214 bits (108), Expect = 1e-52 Identities = 251/298 (84%), Gaps = 3/298 (1%) Strand = Plus / Minus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 |||||| ||||||||||||||||||||| ||| ||||||||||| || || || |||||| Sbjct: 81012 aaaaatgatatgattcaacctcagacccatttgaatgtagcagataacagcggggctcga 80953 Query: 101 aaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggt 160 ||||||||||||||||| ||||||||||| | |||| |||||||||| ||||||| Sbjct: 80952 gaattgatgtgtattcgaatcataggagcta---gcaatcgccgatatgctcatattggt 80896 Query: 161 gatgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaa 220 || |||||||||||||| |||||||||||| | || | ||||||||||||||||| ||| Sbjct: 80895 gacgttattgttgctgtgatcaaagacgcagttccaaacatgcctctagaaagatcagaa 80836 Query: 221 gtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataata 280 || | ||||||||||||| ||||| ||||||||| | ||| | || ||||||| ||| Sbjct: 80835 gtggtcagagctgtaattgtccgtacttgtaaagaacttaaacgtgacaacggtatgata 80776 Query: 281 atccgctatgatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 || || |||||||||||||| || ||| | ||||||||| |||| || |||||||||| Sbjct: 80775 atacgatatgatgacaatgccgcagttgtgattgatcaagaaggaaatccaaaaggaa 80718
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 212 bits (107), Expect = 5e-52 Identities = 250/297 (84%), Gaps = 3/297 (1%) Strand = Plus / Minus Query: 42 aaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaa 101 |||||||||||||||||||||| |||||||| ||||||||||| || || ||||| ||| Sbjct: 83337 aaaataatatgattcaacctcaaacccttttgaatgtagcagataacagcggagcccgag 83278 Query: 102 aattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtg 161 ||||||||||||||||| ||||||| ||| |||||| |||||||||| |||||||| Sbjct: 83277 aattgatgtgtattcgaatcatagg---ggctagtaatcgacgatatgctcatattggtg 83221 Query: 162 atgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaag 221 | |||||||||||||||||||| | || | || | | ||| |||||||||| |||| Sbjct: 83220 acgttattgttgctgtaatcaagaaagccgtcccaaatacacctttagaaagatcagaag 83161 Query: 222 taattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataa 281 | || ||||||||||||||||||| ||||||||| ||||| | ||| | ||||| |||| Sbjct: 83160 tgatcagagctgtaattgtacgtacttgtaaagaactcaaacgagaaaatggtatgataa 83101 Query: 282 tccgctatgatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 | || ||||||||||||||||||||| | ||||||||| |||| || |||||||||| Sbjct: 83100 tacgatatgatgacaatgctgcggttgttattgatcaagaaggaaatccaaaaggaa 83044
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 212 bits (107), Expect = 5e-52 Identities = 244/289 (84%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgatg 109 ||||||||||||||||||| |||||||||||| || ||||| || |||||| |||||||| Sbjct: 82674 atgattcaacctcagacccatttaaatgtagcggataatagcggggctcgagaattgatg 82615 Query: 110 tgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgttatt 169 ||||||||| ||||||||||| | |||| |||||||||| ||||||||| |||||| Sbjct: 82614 tgtattcgaatcataggagcta---gcaatcgtcgatatgctcatattggtgacgttatt 82558 Query: 170 gttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaattcga 229 |||||||| |||||||| ||| | || | ||||| ||||||||||| |||||| | || Sbjct: 82557 gttgctgtgatcaaagaagcagtaccaaatatgcccctagaaagatcagaagtagtcaga 82498 Query: 230 gctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgctat 289 ||||||||||| ||||| ||||||||| ||||| | || |||| || |||||||| ||| Sbjct: 82497 gctgtaattgtgcgtacctgtaaagaactcaaacgtgacaacgggatgataatccgatat 82438 Query: 290 gatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| ||| | ||||||||| |||| || ||||| |||| Sbjct: 82437 gatgacaatgctgcagttgttattgatcaagaaggaaatccaaagggaa 82389
>gb|AF441853.1|AF441853 Cucumis sativus RBL1 mRNA, complete cds; chloroplast gene for chloroplast product Length = 703 Score = 212 bits (107), Expect = 5e-52 Identities = 250/297 (84%), Gaps = 3/297 (1%) Strand = Plus / Plus Query: 42 aaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaa 101 |||||||||||||||||||||| |||||||| ||||||||||| || || ||||| ||| Sbjct: 59 aaaataatatgattcaacctcaaacccttttgaatgtagcagataacagcggagcccgag 118 Query: 102 aattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtg 161 ||||||||||||||||| ||||||| ||| |||||| |||||||||| |||||||| Sbjct: 119 aattgatgtgtattcgaatcatagg---ggctagtaatcgacgatatgctcatattggtg 175 Query: 162 atgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaag 221 | |||||||||||||||||||| | || | || | | ||| |||||||||| |||| Sbjct: 176 acgttattgttgctgtaatcaagaaagccgtcccaaatacacctttagaaagatcagaag 235 Query: 222 taattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataa 281 | || ||||||||||||||||||| ||||||||| ||||| | ||| | ||||| |||| Sbjct: 236 tgatcagagctgtaattgtacgtacttgtaaagaactcaaacgagaaaatggtatgataa 295 Query: 282 tccgctatgatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 | || ||||||||||||||||||||| | ||||||||| |||| || |||||||||| Sbjct: 296 tacgatatgatgacaatgctgcggttgttattgatcaagaaggaaatccaaaaggaa 352
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 212 bits (107), Expect = 5e-52 Identities = 250/297 (84%), Gaps = 3/297 (1%) Strand = Plus / Minus Query: 42 aaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaa 101 |||||||||||||||||||||| |||||||| ||||||||||| || || ||||| ||| Sbjct: 83565 aaaataatatgattcaacctcaaacccttttgaatgtagcagataacagcggagcccgag 83506 Query: 102 aattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtg 161 ||||||||||||||||| ||||||| ||| |||||| |||||||||| |||||||| Sbjct: 83505 aattgatgtgtattcgaatcatagg---ggctagtaatcgacgatatgctcatattggtg 83449 Query: 162 atgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaag 221 | |||||||||||||||||||| | || | || | | ||| |||||||||| |||| Sbjct: 83448 acgttattgttgctgtaatcaagaaagccgtcccaaatacacctttagaaagatcagaag 83389 Query: 222 taattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataa 281 | || ||||||||||||||||||| ||||||||| ||||| | ||| | ||||| |||| Sbjct: 83388 tgatcagagctgtaattgtacgtacttgtaaagaactcaaacgagaaaatggtatgataa 83329 Query: 282 tccgctatgatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 | || ||||||||||||||||||||| | ||||||||| |||| || |||||||||| Sbjct: 83328 tacgatatgatgacaatgctgcggttgttattgatcaagaaggaaatccaaaaggaa 83272
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 212 bits (107), Expect = 5e-52 Identities = 244/289 (84%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgatg 109 ||||||||||||||||||| |||||||||||| || ||||| || |||||| |||||||| Sbjct: 82686 atgattcaacctcagacccatttaaatgtagcggataatagcggggctcgagaattgatg 82627 Query: 110 tgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgttatt 169 ||||||||| ||||||||||| | |||| |||||||||| ||||||||| |||||| Sbjct: 82626 tgtattcgaatcataggagcta---gcaatcgtcgatatgctcatattggtgacgttatt 82570 Query: 170 gttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaattcga 229 |||||||| |||||||| ||| | || | ||||| ||||||||||| |||||| | || Sbjct: 82569 gttgctgtgatcaaagaagcagtaccaaatatgcccctagaaagatcagaagtagtcaga 82510 Query: 230 gctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgctat 289 ||||||||||| ||||| ||||||||| ||||| | || |||| || |||||||| ||| Sbjct: 82509 gctgtaattgtgcgtacctgtaaagaactcaaacgtgacaacgggatgataatccgatat 82450 Query: 290 gatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| ||| | ||||||||| |||| || ||||| |||| Sbjct: 82449 gatgacaatgctgcagttgttattgatcaagaaggaaatccaaagggaa 82401
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 204 bits (103), Expect = 1e-49 Identities = 243/289 (84%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgatg 109 ||||||||||||||||||| ||| ||||||||||| || || || || ||| |||||||| Sbjct: 85455 atgattcaacctcagacccatttgaatgtagcagataacagcggggcccgagaattgatg 85396 Query: 110 tgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgttatt 169 |||||||||||||||||| ||| |||||| |||||||||| ||||||||| |||||| Sbjct: 85395 tgtattcgagtcatagga---gctagtaatcgccgatatgctcatattggtgacgttatt 85339 Query: 170 gttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaattcga 229 |||||||| ||||| || ||| | || | | |||||||||||||| ||||| || || Sbjct: 85338 gttgctgtgatcaaggaagcagtaccaaatacacctctagaaagatcagaagtgatcaga 85279 Query: 230 gctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgctat 289 ||||||||||||||||| |||||||| ||||| |||| |||| || ||||| || ||| Sbjct: 85278 gctgtaattgtacgtactcgtaaagaactcaaacgcgacaacgggatgataatacgatat 85219 Query: 290 gatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| ||| | ||||||||| |||| || |||||||||| Sbjct: 85218 gatgacaatgctgccgttgtcattgatcaagaaggaaatccaaaaggaa 85170
>emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19, rpl14, rpl16 and rpl22 for ribosomal proteins S3, S19, L14, L16 and L22 Length = 4102 Score = 204 bits (103), Expect = 1e-49 Identities = 248/295 (84%), Gaps = 6/295 (2%) Strand = Plus / Plus Query: 47 aatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattg 106 |||||||||||||||||||||| ||| |||||||||||||| || || |||||| ||||| Sbjct: 3326 aatatgattcaacctcagacccatttgaatgtagcagacaacagcggggctcgagaattg 3385 Query: 107 atgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgtt 166 |||||||||||| ||||||||||| | || | |||||||||||||||||||| ||| Sbjct: 3386 atgtgtattcgaatcataggagcta---gcaaccgtcgatatgctcgtattggtgacgtt 3442 Query: 167 attgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaatt 226 ||||||||||| |||||||| ||| | ||| | | ||| |||||||||| ||||| || Sbjct: 3443 attgttgctgtgatcaaagaagcaatccccaacacgcccttagaaagatcagaagtgatc 3502 Query: 227 cgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgc 286 |||||||| |||||||||| ||||||||| | ||| |||| ||||||| ||||| || Sbjct: 3503 agagctgtagttgtacgtacttgtaaagaactaaaacgcgacaacggtatgataatacga 3562 Query: 287 tatgatgacaatgctgc---ggttataattgatcaaaaaggcaacccaaaaggaa 338 ||||||||||||||||| ||||| ||||||||| |||| || |||||||||| Sbjct: 3563 tatgatgacaatgctgcagttgttatcattgatcaagaaggaaatccaaaaggaa 3617
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 204 bits (103), Expect = 1e-49 Identities = 243/289 (84%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgatg 109 ||||||||||||||||||| |||||||||||| || ||||| || |||||| |||||||| Sbjct: 82821 atgattcaacctcagacccatttaaatgtagcggataatagcggggctcgagaattgatg 82762 Query: 110 tgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgttatt 169 ||||||||| ||||||||||| | |||| |||||||||| ||||||||| |||||| Sbjct: 82761 tgtattcgaatcataggagcta---gcaatcgtcgatatgctcatattggtgacgttatt 82705 Query: 170 gttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaattcga 229 |||||||| |||||||| ||| | || | ||||| ||||||||||| |||||| | || Sbjct: 82704 gttgctgtgatcaaagaagcagtaccaaatatgcccctagaaagatcagaagtagtcaga 82645 Query: 230 gctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgctat 289 ||||||||||| ||||| ||||||||| ||||| | || |||| || ||||| || || Sbjct: 82644 gctgtaattgtgcgtacctgtaaagaactcaaacgtgacaacgggatgataatacgatac 82585 Query: 290 gatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| ||| | ||||||||| |||| || |||||||||| Sbjct: 82584 gatgacaatgctgcagttgttattgatcaagaaggaaatccaaaaggaa 82536
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 204 bits (103), Expect = 1e-49 Identities = 243/289 (84%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgatg 109 ||||||||||||||||||| |||||||||||| || ||||| || |||||| |||||||| Sbjct: 82818 atgattcaacctcagacccatttaaatgtagcggataatagcggggctcgagaattgatg 82759 Query: 110 tgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgttatt 169 ||||||||| ||||||||||| | |||| |||||||||| ||||||||| |||||| Sbjct: 82758 tgtattcgaatcataggagcta---gcaatcgtcgatatgctcatattggtgacgttatt 82702 Query: 170 gttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaattcga 229 |||||||| |||||||| ||| | || | ||||| ||||||||||| |||||| | || Sbjct: 82701 gttgctgtgatcaaagaagcagtaccaaatatgcccctagaaagatcagaagtagtcaga 82642 Query: 230 gctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgctat 289 ||||||||||| ||||| ||||||||| ||||| | || |||| || ||||| || || Sbjct: 82641 gctgtaattgtgcgtacctgtaaagaactcaaacgtgacaacgggatgataatacgatac 82582 Query: 290 gatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| ||| | ||||||||| |||| || |||||||||| Sbjct: 82581 gatgacaatgctgcagttgttattgatcaagaaggaaatccaaaaggaa 82533
>emb|AL731738.6|CNS08C7N Oryza sativa chromosome 12, . BAC OSJNBa0005K20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 143618 Score = 202 bits (102), Expect = 5e-49 Identities = 123/130 (94%) Strand = Plus / Plus Query: 209 gaaagatccgaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaa 268 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 78798 gaaagatccgaagtaattcgagctgtaattgtacgtacatgtaaagagttcaaatgcgaa 78857 Query: 269 gacggtataataatccgctatgatgacaatgctgcggttataattgatcaaaaaggcaac 328 |||||||||||||| |||||||| |||||||| |||||||| |||||||||||||| || Sbjct: 78858 gacggtataataatacgctatgacgacaatgcagcggttatcattgatcaaaaaggaaat 78917 Query: 329 ccaaaaggaa 338 |||||||||| Sbjct: 78918 ccaaaaggaa 78927
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 196 bits (99), Expect = 3e-47 Identities = 242/289 (83%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgatg 109 ||||||||||||||||||| |||||||||||| || || || || |||||| |||||||| Sbjct: 83309 atgattcaacctcagacccatttaaatgtagcggataacagcggggctcgagaattgatg 83250 Query: 110 tgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgttatt 169 ||||||||| ||||||||||| | |||| |||||||||| ||||||||| |||||| Sbjct: 83249 tgtattcgaatcataggagcta---gcaatcgtcgatatgctcatattggtgacgttatt 83193 Query: 170 gttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaattcga 229 |||||||| |||||||| || | || | ||||| ||||||||||| |||||| | || Sbjct: 83192 gttgctgtgatcaaagaagccataccaaatatgcccctagaaagatcagaagtagtcaga 83133 Query: 230 gctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgctat 289 ||||||||||| || || ||||||||| ||||| | || |||| |||||||| || ||| Sbjct: 83132 gctgtaattgtgcggacctgtaaagaactcaaacgtgacaacgggataataatacgatat 83073 Query: 290 gatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| ||| | ||||||||| |||| || |||||||||| Sbjct: 83072 gatgacaatgctgcagttgttattgatcaagaaggaaatccaaaaggaa 83024
>gb|M15176.1|MZECPPG Zea mays chloroplast Eco x DNA Length = 1368 Score = 194 bits (98), Expect = 1e-46 Identities = 104/106 (98%) Strand = Plus / Plus Query: 142 gcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgcattgccccaaat 201 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 1260 gcgatatgctcgtattggtgatgttattattgctgtaatcaaagacgcagtgccccaaat 1319 Query: 202 gcctctagaaagatccgaagtaattcgagctgtaattgtacgtaca 247 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1320 gcctctagaaagatccgaagtaattcgagctgtaattgtacgtaca 1365 Score = 107 bits (54), Expect = 2e-20 Identities = 60/62 (96%) Strand = Plus / Plus Query: 142 gcgatatgctcgtattggtgatgttattgttgctgtaatcaaagacgcattgccccaaat 201 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 1200 gcgatatgctcgtattggtgatgttattattgctgtaatcaaagacgcagtgccccaaat 1259 Query: 202 gc 203 || Sbjct: 1260 gc 1261 Score = 87.7 bits (44), Expect = 2e-14 Identities = 67/72 (93%), Gaps = 2/72 (2%) Strand = Plus / Plus Query: 11 tccttttgcatt-gaaataacaaattgaaataaaaataatatgattcaacctcagaccct 69 |||||||||||| |||||||||||| |||| ||| |||||||||||||||||||||||| Sbjct: 1129 tccttttgcatttgaaataacaaatggaaaccaaa-taatatgattcaacctcagaccct 1187 Query: 70 tttaaatgtagc 81 |||||||||||| Sbjct: 1188 tttaaatgtagc 1199
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 190 bits (96), Expect = 2e-45 Identities = 248/298 (83%), Gaps = 3/298 (1%) Strand = Plus / Minus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 ||||| || ||||||||| |||| ||| ||| |||||||| ||||| || || |||||| Sbjct: 87695 aaaaaaaaaatgattcaagctcaaacctatttgaatgtagcggacaacagcggggctcga 87636 Query: 101 aaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggt 160 ||||||||||||||||| || |||||||| |||| | |||||||||| ||||||| Sbjct: 87635 gaattgatgtgtattcgaatcgtaggagcta---gtaacccccgatatgctcatattggt 87579 Query: 161 gatgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaa 220 || ||||||||||||||||||||||| ||| | ||| | ||||| || |||||||| ||| Sbjct: 87578 gacgttattgttgctgtaatcaaagaagcagtacccaatatgcccctggaaagatcagaa 87519 Query: 221 gtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataata 280 || || ||||||||||||||||||||||||||||| ||||| | || ||||||||||| Sbjct: 87518 gtgatcagagctgtaattgtacgtacatgtaaagaactcaaacgtgacaacggtataata 87459 Query: 281 atccgctatgatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 || || |||||||||||||| || ||| | ||||||| | | || || |||||||||| Sbjct: 87458 atacgatatgatgacaatgcagcagttgttattgatccagagggaaatccaaaaggaa 87401 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 aaattgaaataaaaataata 50 |||||||||||||||||||| Sbjct: 49941 aaattgaaataaaaataata 49922
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 188 bits (95), Expect = 8e-45 Identities = 241/289 (83%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgatg 109 ||||||||||||||||||| |||||||||||| || || || || |||||| |||||||| Sbjct: 83546 atgattcaacctcagacccatttaaatgtagcggataacagcggggctcgagaattgatg 83487 Query: 110 tgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgttatt 169 ||||||||| ||||||||||| | |||| |||||||||| ||||||||| |||||| Sbjct: 83486 tgtattcgaatcataggagcta---gcaatcgtcgatatgctcatattggtgacgttatt 83430 Query: 170 gttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaattcga 229 |||||||| |||||||| || | || | ||||| ||||||||||| |||||| | || Sbjct: 83429 gttgctgtgatcaaagaagccgtaccaaatatgcccctagaaagatcagaagtagtcaga 83370 Query: 230 gctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgctat 289 ||||||||||| || || ||||||||| ||||| | || |||| || ||||| || ||| Sbjct: 83369 gctgtaattgtgcggacctgtaaagaactcaaacgtgacaacgggatgataatacgatat 83310 Query: 290 gatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| ||| | ||||||||| |||| || |||||||||| Sbjct: 83309 gatgacaatgctgcagttgttattgatcaagaaggaaatccaaaaggaa 83261
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 188 bits (95), Expect = 8e-45 Identities = 241/289 (83%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgatg 109 ||||||||||||||||||| |||||||||||| || || || || |||||| |||| ||| Sbjct: 83789 atgattcaacctcagacccatttaaatgtagcggataacagcggggctcgagaattaatg 83730 Query: 110 tgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgttatt 169 ||||||||| ||||||||||| | |||| |||||||||| ||||||||| |||||| Sbjct: 83729 tgtattcgaatcataggagcta---gcaatcgtcgatatgctcatattggtgacgttatt 83673 Query: 170 gttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaattcga 229 |||||||| |||||||| ||| | || | ||||| ||||||||||| ||| || | || Sbjct: 83672 gttgctgtgatcaaagaagcagtaccaaatatgcccctagaaagatcagaaatagtcaga 83613 Query: 230 gctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgctat 289 ||||||||||| ||||| ||||||||| ||||| | || |||| || ||||| || ||| Sbjct: 83612 gctgtaattgtgcgtacctgtaaagaactcaaacgtgacaacgggatgataatacgatat 83553 Query: 290 gatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| ||| | ||||||||| |||| || |||||||||| Sbjct: 83552 gatgacaatgctgcagttgttattgatcaagaaggaaatccaaaaggaa 83504
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 188 bits (95), Expect = 8e-45 Identities = 241/289 (83%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgatg 109 ||||||||||||||||||| |||||||||||| || || || || |||||| |||||||| Sbjct: 83544 atgattcaacctcagacccatttaaatgtagcggataacagcggggctcgagaattgatg 83485 Query: 110 tgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgttatt 169 ||||||||| ||||||||||| | |||| |||||||||| ||||||||| |||||| Sbjct: 83484 tgtattcgaatcataggagcta---gcaatcgtcgatatgctcatattggtgacgttatt 83428 Query: 170 gttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaattcga 229 |||||||| |||||||| || | || | ||||| ||||||||||| |||||| | || Sbjct: 83427 gttgctgtgatcaaagaagccgtaccaaatatgcccctagaaagatcagaagtagtcaga 83368 Query: 230 gctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgctat 289 ||||||||||| || || ||||||||| ||||| | || |||| || ||||| || ||| Sbjct: 83367 gctgtaattgtgcggacctgtaaagaactcaaacgtgacaacgggatgataatacgatat 83308 Query: 290 gatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 |||||||||||||| ||| | ||||||||| |||| || |||||||||| Sbjct: 83307 gatgacaatgctgcagttgttattgatcaagaaggaaatccaaaaggaa 83259
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 174 bits (88), Expect = 1e-40 Identities = 246/298 (82%), Gaps = 3/298 (1%) Strand = Plus / Minus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 |||||| ||||||||||||| || ||| ||| |||||||||||||| || || ||| || Sbjct: 81073 aaaaatgatatgattcaaccacaaacctatttgaatgtagcagacaacagcggggctaga 81014 Query: 101 aaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggt 160 ||||||||||||||||| | |||||| ||| |||||| |||||||||| ||||||| Sbjct: 81013 gaattgatgtgtattcgaataatagga---gctagtaatcgccgatatgctcatattggt 80957 Query: 161 gatgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaa 220 || ||||||||||||||||||||||| ||| | || | | |||||||||||||| ||| Sbjct: 80956 gacgttattgttgctgtaatcaaagaagcaataccaaatactcctctagaaagatcagaa 80897 Query: 221 gtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataata 280 || ||| ||||||||||||||||||| ||||||||| ||||| | | | || | ||| Sbjct: 80896 gtgattagagctgtaattgtacgtacttgtaaagaactcaaacgtaacaatgggacgata 80837 Query: 281 atccgctatgatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 || || |||||||||||||| || ||| | ||||||||| |||| || |||||||||| Sbjct: 80836 atacgatatgatgacaatgccgcagttgtcattgatcaagaaggaaatccaaaaggaa 80779
>gb|DQ069424.1| Ranunculus macranthus ribosomal protein L14 (rpl14) gene, partial cds; chloroplast Length = 366 Score = 172 bits (87), Expect = 5e-40 Identities = 239/289 (82%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgatg 109 |||||||||||||||||| |||||||||||| ||||| || || ||| ||||||| ||| Sbjct: 1 atgattcaacctcagacctatttaaatgtagcggacaacagcggggctagaaaattaatg 60 Query: 110 tgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgttatt 169 |||||| || ||||||||||| |||||| || ||||||| |||||| || |||||| Sbjct: 61 tgtattagaatcataggagcta---gtaatcgacgttatgctcatattggcgacgttatt 117 Query: 170 gttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaagtaattcga 229 ||||| ||||||||||| ||| | ||| | ||||||||| ||||||| ||||| || || Sbjct: 118 gttgcggtaatcaaagaagcagttcccaatatgcctctacaaagatcagaagtgatcaga 177 Query: 230 gctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgctat 289 |||||||||||||| || ||||||||| ||||| | || | ||||| ||||| | ||| Sbjct: 178 gctgtaattgtacgcacgtgtaaagaactcaaacgtgacaatggtatgataatacaatat 237 Query: 290 gatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 ||||||||||| || ||| | ||||||||| |||| || |||||||||| Sbjct: 238 gatgacaatgcagcagttgtcattgatcaagaaggaaatccaaaaggaa 286
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 165 bits (83), Expect = 1e-37 Identities = 170/198 (85%), Gaps = 7/198 (3%) Strand = Plus / Plus Query: 102 aattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtg 161 ||||||| ||||||||| || ||||||||| ||||||| ||||||||| |||||||| Sbjct: 330856 aattgatatgtattcgaatcttaggagctg---gtaatcactgatatgctcatattggtg 330912 Query: 162 atgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagat----cc 217 | ||||||||||||||||||||||| ||| ||||| |||||||||||||||||| | Sbjct: 330913 acgttattgttgctgtaatcaaagaagcagtgcccaaaatgcctctagaaagatcagaca 330972 Query: 218 gaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtata 277 ||||||| |||||||||||||||||||||||||||||| ||||| | || ||||||| Sbjct: 330973 gaagtaagacgagctgtaattgtacgtacatgtaaagaactcaaacgtgacaacggtatg 331032 Query: 278 ataatccgctatgatgac 295 ||||| || ||||||||| Sbjct: 331033 ataatacgatatgatgac 331050
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 165 bits (83), Expect = 1e-37 Identities = 170/198 (85%), Gaps = 7/198 (3%) Strand = Plus / Plus Query: 102 aattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtg 161 ||||||| ||||||||| || ||||||||| ||||||| ||||||||| |||||||| Sbjct: 330046 aattgatatgtattcgaatcttaggagctg---gtaatcactgatatgctcatattggtg 330102 Query: 162 atgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagat----cc 217 | ||||||||||||||||||||||| ||| ||||| |||||||||||||||||| | Sbjct: 330103 acgttattgttgctgtaatcaaagaagcagtgcccaaaatgcctctagaaagatcagaca 330162 Query: 218 gaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtata 277 ||||||| |||||||||||||||||||||||||||||| ||||| | || ||||||| Sbjct: 330163 gaagtaagacgagctgtaattgtacgtacatgtaaagaactcaaacgtgacaacggtatg 330222 Query: 278 ataatccgctatgatgac 295 ||||| || ||||||||| Sbjct: 330223 ataatacgatatgatgac 330240
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 165 bits (83), Expect = 1e-37 Identities = 170/198 (85%), Gaps = 7/198 (3%) Strand = Plus / Plus Query: 102 aattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtg 161 ||||||| ||||||||| || ||||||||| ||||||| ||||||||| |||||||| Sbjct: 330043 aattgatatgtattcgaatcttaggagctg---gtaatcactgatatgctcatattggtg 330099 Query: 162 atgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagat----cc 217 | ||||||||||||||||||||||| ||| ||||| |||||||||||||||||| | Sbjct: 330100 acgttattgttgctgtaatcaaagaagcagtgcccaaaatgcctctagaaagatcagaca 330159 Query: 218 gaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtata 277 ||||||| |||||||||||||||||||||||||||||| ||||| | || ||||||| Sbjct: 330160 gaagtaagacgagctgtaattgtacgtacatgtaaagaactcaaacgtgacaacggtatg 330219 Query: 278 ataatccgctatgatgac 295 ||||| || ||||||||| Sbjct: 330220 ataatacgatatgatgac 330237
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 165 bits (83), Expect = 1e-37 Identities = 170/198 (85%), Gaps = 7/198 (3%) Strand = Plus / Plus Query: 102 aattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtg 161 ||||||| ||||||||| || ||||||||| ||||||| ||||||||| |||||||| Sbjct: 98811 aattgatatgtattcgaatcttaggagctg---gtaatcactgatatgctcatattggtg 98867 Query: 162 atgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagat----cc 217 | ||||||||||||||||||||||| ||| ||||| |||||||||||||||||| | Sbjct: 98868 acgttattgttgctgtaatcaaagaagcagtgcccaaaatgcctctagaaagatcagaca 98927 Query: 218 gaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtata 277 ||||||| |||||||||||||||||||||||||||||| ||||| | || ||||||| Sbjct: 98928 gaagtaagacgagctgtaattgtacgtacatgtaaagaactcaaacgtgacaacggtatg 98987 Query: 278 ataatccgctatgatgac 295 ||||| || ||||||||| Sbjct: 98988 ataatacgatatgatgac 99005
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 165 bits (83), Expect = 1e-37 Identities = 170/198 (85%), Gaps = 7/198 (3%) Strand = Plus / Plus Query: 102 aattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtg 161 ||||||| ||||||||| || ||||||||| ||||||| ||||||||| |||||||| Sbjct: 329900 aattgatatgtattcgaatcttaggagctg---gtaatcactgatatgctcatattggtg 329956 Query: 162 atgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagat----cc 217 | ||||||||||||||||||||||| ||| ||||| |||||||||||||||||| | Sbjct: 329957 acgttattgttgctgtaatcaaagaagcagtgcccaaaatgcctctagaaagatcagaca 330016 Query: 218 gaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtata 277 ||||||| |||||||||||||||||||||||||||||| ||||| | || ||||||| Sbjct: 330017 gaagtaagacgagctgtaattgtacgtacatgtaaagaactcaaacgtgacaacggtatg 330076 Query: 278 ataatccgctatgatgac 295 ||||| || ||||||||| Sbjct: 330077 ataatacgatatgatgac 330094
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 161 bits (81), Expect = 2e-36 Identities = 245/299 (81%), Gaps = 3/299 (1%) Strand = Plus / Minus Query: 40 taaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcg 99 ||||||| |||||||||||||||| |||| ||| ||||| || || || ||||| ||||| Sbjct: 86180 taaaaatgatatgattcaacctcaaacccgtttgaatgtcgcggataacagtggggctcg 86121 Query: 100 aaaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattgg 159 | |||| |||||||||||| |||| |||||| |||||| |||||||||| ||| || Sbjct: 86120 agaattaatgtgtattcgaatcatcggagcta---gtaatcgtcgatatgctcatatcgg 86064 Query: 160 tgatgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccga 219 ||| ||||||||||||| ||||| || ||||| || | | ||||||||||| || Sbjct: 86063 tgacattattgttgctgtgatcaaggaagcattaccaagcacctccctagaaagatcaga 86004 Query: 220 agtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataat 279 ||| | ||||||||||||||||||| ||||||||| | ||||| || |||||||| || Sbjct: 86003 agtggtcagagctgtaattgtacgtacttgtaaagaacttaaatgtgacgacggtatcat 85944 Query: 280 aatccgctatgatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 ||| || ||||||||||||||||| ||| | ||||||||| |||| || |||||||||| Sbjct: 85943 aatacgatatgatgacaatgctgctgttgtcattgatcaagaaggaaatccaaaaggaa 85885
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 159 bits (80), Expect = 7e-36 Identities = 244/298 (81%), Gaps = 3/298 (1%) Strand = Plus / Minus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 |||||| |||||||||||||||| |||| |||||||||||| || ||||| ||||| || Sbjct: 78952 aaaaatgatatgattcaacctcaaacccatttaaatgtagccgataatagcggagcccgc 78893 Query: 101 aaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggt 160 |||||||||||||||||| |||||||| ||| |||||| ||||| ||| ||||||| Sbjct: 78892 aaattgatgtgtattcgaatcatagga---gctagtaatcgacgatacgcttatattggt 78836 Query: 161 gatgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaa 220 || || ||||||||||||||||||| ||| | || | | || |||||||||| ||| Sbjct: 78835 gacattgttgttgctgtaatcaaagaagcagtaccgaatacacccttagaaagatcagaa 78776 Query: 221 gtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataata 280 || || ||||||||||||||||||| ||||||||| ||||| | | ||||||||| Sbjct: 78775 gtgatcagagctgtaattgtacgtacttgtaaagaactcaaacgtagcaatggtataata 78716 Query: 281 atccgctatgatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 || | |||||||| |||||||| ||| | ||||||||| |||| || |||||||||| Sbjct: 78715 atacagtatgatgataatgctgcagttgtcattgatcaagaaggaaatccaaaaggaa 78658
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 155 bits (78), Expect = 1e-34 Identities = 144/165 (87%), Gaps = 7/165 (4%) Strand = Plus / Plus Query: 102 aattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtg 161 ||||||| ||||||||| || ||||||||| ||||||| ||||||||| |||||||| Sbjct: 37550 aattgatatgtattcgaatcttaggagctg---gtaatcactgatatgctcatattggtg 37606 Query: 162 atgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagat----cc 217 | ||||||||||||||||||||||| ||| ||||| |||||||||||||||||| | Sbjct: 37607 acgttattgttgctgtaatcaaagaagcagtgcccaaaatgcctctagaaagatcagaca 37666 Query: 218 gaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaa 262 ||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 37667 gaagtaagacgagctgtaattgtacgtacatgtaaagaactcaaa 37711
>dbj|D13105.1|RICMT09 Oryza sativa (japonica cultivar-group) mitochondrial rp114 pseudogene, clone:pMTVSCT13 Length = 645 Score = 149 bits (75), Expect = 7e-33 Identities = 168/198 (84%), Gaps = 7/198 (3%) Strand = Plus / Minus Query: 102 aattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtg 161 ||||||| ||||||||| || ||||||||| ||||||| ||||||||| |||||| | Sbjct: 403 aattgatatgtattcgaatcttaggagctg---gtaatcactgatatgctcatattgggg 347 Query: 162 atgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagat----cc 217 | ||||||||||||||||||||||| ||| ||||| ||||| |||||||||||| | Sbjct: 346 acgttattgttgctgtaatcaaagaagcagtgcccaaaatggctctagaaagatcagaca 287 Query: 218 gaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtata 277 ||||||| |||||||||||||||||||||||||||||| ||||| | || ||||||| Sbjct: 286 gaagtaagacgagctgtaattgtacgtacatgtaaagaactcaaacgtgacaacggtatg 227 Query: 278 ataatccgctatgatgac 295 ||||| || ||||||||| Sbjct: 226 ataatacgatatgatgac 209
>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E07 Length = 176486 Score = 145 bits (73), Expect = 1e-31 Identities = 160/189 (84%) Strand = Plus / Plus Query: 145 atatgctcgtattggtgatgttattgttgctgtaatcaaagacgcattgccccaaatgcc 204 |||| ||||||||||||||||||||||||||||||| ||||| ||| || || | ||||| Sbjct: 33250 atatactcgtattggtgatgttattgttgctgtaataaaagatgcagtgtccaagatgcc 33309 Query: 205 tctagaaagatccgaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaatg 264 |||||||||||| ||||||| ||| |||||||||| | |||||||| || |||||||| Sbjct: 33310 tctagaaagatcaaaagtaatacgatctgtaattgtgcatacatgtatggatttcaaatg 33369 Query: 265 cgaagacggtataataatccgctatgatgacaatgctgcggttataattgatcaaaaagg 324 | || ||||||||||||| | |||| | ||||||| | ||||| |||||||||||||| Sbjct: 33370 caaaaacggtataataatactctataacaacaatgcagtcgttatcattgatcaaaaagg 33429 Query: 325 caacccaaa 333 || ||||| Sbjct: 33430 aaatccaaa 33438
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 143 bits (72), Expect = 4e-31 Identities = 242/298 (81%), Gaps = 3/298 (1%) Strand = Plus / Minus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 |||||| |||||||||||||||| | || ||| |||||||| || || || || || ||| Sbjct: 85864 aaaaatgatatgattcaacctcaaagccatttgaatgtagcggataacagcggggcccga 85805 Query: 101 aaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggt 160 |||| ||||||||| || ||||||||||| |||||| |||||||||| ||| ||| Sbjct: 85804 gaattaatgtgtattagaatcataggagcta---gtaatcgccgatatgctcatatcggt 85748 Query: 161 gatgttattgttgctgtaatcaaagacgcattgccccaaatgcctctagaaagatccgaa 220 || ||||||||||||| ||||| || ||||| || | | |||||||||||||| || Sbjct: 85747 gacattattgttgctgtgatcaaggaagcattaccaaacacacctctagaaagatcagag 85688 Query: 221 gtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataata 280 || || ||||||||||||||||||| ||||||||| | ||| | || ||||||| ||| Sbjct: 85687 gtgatcagagctgtaattgtacgtacttgtaaagaacttaaacgtgacaacggtatgata 85628 Query: 281 atccgctatgatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 || || |||||||| |||||||| ||| | ||||||||| |||| || |||||||||| Sbjct: 85627 atacgatatgatgataatgctgcagttgtgattgatcaagaaggaaatccaaaaggaa 85570
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 139 bits (70), Expect = 7e-30 Identities = 183/218 (83%), Gaps = 7/218 (3%) Strand = Plus / Minus Query: 47 aatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattg 106 |||||||||||||| || ||| ||| |||||||||||||| || || ||| |||||||| Sbjct: 80158 aatatgattcaaccacaaacctatttgaatgtagcagacaacagcggggctagaaaattg 80099 Query: 107 atgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggtgatgtt 166 |||||||||||| | |||||| ||| |||||| || ||||||| ||||||||| ||| Sbjct: 80098 atgtgtattcgaataatagga---gctagtaatcgccgctatgctcatattggtgacgtt 80042 Query: 167 attgttgctgtaatcaaagacgcattgccccaaatgc--ctctagaaagatccgaagtaa 224 ||||||||||||||||| || ||| | ||||||| | ||||||||||||| ||||| Sbjct: 80041 attgttgctgtaatcaaggaagcaat--cccaaatactactctagaaagatcagaagtgg 79984 Query: 225 ttcgagctgtaattgtacgtacatgtaaagaattcaaa 262 | ||||||||||||||||||| ||||||||| ||||| Sbjct: 79983 tcagagctgtaattgtacgtacttgtaaagaactcaaa 79946
>gb|AC133862.6| Medicago truncatula clone mth2-30d7, complete sequence Length = 130054 Score = 107 bits (54), Expect = 2e-20 Identities = 179/218 (82%), Gaps = 7/218 (3%) Strand = Plus / Minus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 |||||| |||||||||||||||| ||| |||||||||||| || ||||| ||||| || Sbjct: 30850 aaaaatgatatgattcaacctcaaacctatttaaatgtagccgataatagcggagcccgc 30791 Query: 101 aaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggt 160 ||||||||||||||||| |||||||| ||| |||||| || |||||| ||||||| Sbjct: 30790 gaattgatgtgtattcgaatcatagga---gctagtaatcgacggtatgcttatattggt 30734 Query: 161 gatgttattgttgctgtaatcaaagacgcattgccccaaatgc--ctctagaaagatccg 218 || || ||||||||||||||||| | ||| | |||||| | || |||||||||| | Sbjct: 30733 gacattgttgttgctgtaatcaaaaaagca--gtaccaaattcatctttagaaagatctg 30676 Query: 219 aagtaattcgagctgtaattgtacgtacatgtaaagaa 256 |||| || | ||||||||||||||||| ||||||||| Sbjct: 30675 aagtgatcagggctgtaattgtacgtacttgtaaagaa 30638
>gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete sequence Length = 140624 Score = 107 bits (54), Expect = 2e-20 Identities = 179/218 (82%), Gaps = 7/218 (3%) Strand = Plus / Plus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 |||||| |||||||||||||||| ||| |||||||||||| || ||||| ||||| || Sbjct: 114653 aaaaatgatatgattcaacctcaaacctatttaaatgtagccgataatagcggagcccgc 114712 Query: 101 aaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggt 160 ||||||||||||||||| |||||||| ||| |||||| || |||||| ||||||| Sbjct: 114713 gaattgatgtgtattcgaatcatagga---gctagtaatcgacggtatgcttatattggt 114769 Query: 161 gatgttattgttgctgtaatcaaagacgcattgccccaaatgc--ctctagaaagatccg 218 || || ||||||||||||||||| | ||| | |||||| | || |||||||||| | Sbjct: 114770 gacattgttgttgctgtaatcaaaaaagca--gtaccaaattcatctttagaaagatctg 114827 Query: 219 aagtaattcgagctgtaattgtacgtacatgtaaagaa 256 |||| || | ||||||||||||||||| ||||||||| Sbjct: 114828 aagtgatcagggctgtaattgtacgtacttgtaaagaa 114865
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 107 bits (54), Expect = 2e-20 Identities = 179/218 (82%), Gaps = 7/218 (3%) Strand = Plus / Plus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 |||||| |||||||||||||||| ||| |||||||||||| || ||||| ||||| || Sbjct: 44665 aaaaatgatatgattcaacctcaaacctatttaaatgtagccgataatagcggagcccgc 44724 Query: 101 aaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggt 160 ||||||||||||||||| |||||||| ||| |||||| || |||||| ||||||| Sbjct: 44725 gaattgatgtgtattcgaatcatagga---gctagtaatcgacggtatgcttatattggt 44781 Query: 161 gatgttattgttgctgtaatcaaagacgcattgccccaaatgc--ctctagaaagatccg 218 || || ||||||||||||||||| | ||| | |||||| | || |||||||||| | Sbjct: 44782 gacattgttgttgctgtaatcaaaaaagca--gtaccaaattcatctttagaaagatctg 44839 Query: 219 aagtaattcgagctgtaattgtacgtacatgtaaagaa 256 |||| || | ||||||||||||||||| ||||||||| Sbjct: 44840 aagtgatcagggctgtaattgtacgtacttgtaaagaa 44877
>dbj|AB077366.1| Iris bungei plastid DNA, intron region Length = 576 Score = 101 bits (51), Expect = 1e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 15 tttgcattgaaataacaaattgaaataaaaataatatgattcaacctcagacccttttaa 74 ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 506 tttgcattgaaataacagattcaaataaaaatgatatgattcaacctcagacccttttaa 565 Query: 75 atg 77 ||| Sbjct: 566 atg 568
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 91.7 bits (46), Expect = 1e-15 Identities = 74/82 (90%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 257 ttcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttataattgat 316 |||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||| Sbjct: 55019 ttcaaatgcgaagacggtataataatacgctatgacaacaatgctgcggttatcattgat 54960 Query: 317 caaaaaggcaacccaaaaggaa 338 ||||||| || ||||| |||| Sbjct: 54959 -aaaaagggaatccaaatggaa 54939
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 91.7 bits (46), Expect = 1e-15 Identities = 74/82 (90%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 257 ttcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttataattgat 316 |||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||| Sbjct: 137822 ttcaaatgcgaagacggtataataatacgctatgacaacaatgctgcggttatcattgat 137763 Query: 317 caaaaaggcaacccaaaaggaa 338 ||||||| || ||||| |||| Sbjct: 137762 -aaaaagggaatccaaatggaa 137742
>gb|AF536225.1| Vigna angularis chloroplast S10B operon, partial sequence Length = 6550 Score = 87.7 bits (44), Expect = 2e-14 Identities = 110/132 (83%) Strand = Plus / Plus Query: 207 tagaaagatccgaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcg 266 |||||||||| ||||| || ||||||||||||||||||| |||||| || | ||| | Sbjct: 5690 tagaaagatctgaagtgatcagagctgtaattgtacgtacttgtaaacaactaaaacgta 5749 Query: 267 aagacggtataataatccgctatgatgacaatgctgcggttataattgatcaaaaaggca 326 ||||||||||||| | |||||||| |||||||| ||||||||||||||| |||| | Sbjct: 5750 gcaacggtataataattcagtatgatgataatgctgcagttataattgatcaagaaggaa 5809 Query: 327 acccaaaaggaa 338 | |||||||||| Sbjct: 5810 atccaaaaggaa 5821 Score = 67.9 bits (34), Expect = 2e-08 Identities = 117/144 (81%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 |||||| |||||||||||||||| || | ||| |||||||| || || || ||||| || Sbjct: 5527 aaaaatgatatgattcaacctcaaactcatttgaatgtagcggataacagcggagcacgt 5586 Query: 101 aaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggt 160 || |||||||||||||| || ||||| ||| |||||| ||||||||| |||||| Sbjct: 5587 gaactgatgtgtattcgaatcctagga---gctagtaatcgacgatatgcttatattggc 5643 Query: 161 gatgttattgttgctgtaatcaaa 184 || || ||||||||||||||||| Sbjct: 5644 gacattgttgttgctgtaatcaaa 5667
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 87.7 bits (44), Expect = 2e-14 Identities = 110/132 (83%) Strand = Plus / Minus Query: 207 tagaaagatccgaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcg 266 |||||||||| ||||| || ||||||||||||||||||| ||||||||| ||||| | Sbjct: 79923 tagaaagatcagaagtgatcagagctgtaattgtacgtacttgtaaagaactcaaacgta 79864 Query: 267 aagacggtataataatccgctatgatgacaatgctgcggttataattgatcaaaaaggca 326 ||||||||||||| | |||||||| |||||||| ||| | ||||||||| |||| | Sbjct: 79863 gcaacggtataataattcagtatgatgataatgctgcagttgtcattgatcaagaaggaa 79804 Query: 327 acccaaaaggaa 338 | |||||||||| Sbjct: 79803 atccaaaaggaa 79792 Score = 83.8 bits (42), Expect = 3e-13 Identities = 119/144 (82%), Gaps = 3/144 (2%) Strand = Plus / Minus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 |||||| |||||||||||||||| || | ||| |||||||| || ||||| ||||| || Sbjct: 80086 aaaaatgatatgattcaacctcaaactcatttgaatgtagctgataatagcggagcacgc 80027 Query: 101 aaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggt 160 || |||||||||||||| || ||||| ||| |||||| ||||||||| ||||||| Sbjct: 80026 gaactgatgtgtattcgaatcctagga---gctagtaatcgacgatatgcttatattggt 79970 Query: 161 gatgttattgttgctgtaatcaaa 184 || || ||||||||||||||||| Sbjct: 79969 gacattgttgttgctgtaatcaaa 79946
>emb|AL663020.4|OSJN00220 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0049H08, complete sequence Length = 186642 Score = 85.7 bits (43), Expect = 8e-14 Identities = 49/51 (96%) Strand = Plus / Plus Query: 195 cccaaatgcctctagaaagatccgaagtaattcgagctgtaattgtacgta 245 ||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 94877 cccaaatgcctctggaaagatccgaagtaatttgagctgtaattgtacgta 94927
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 85.7 bits (43), Expect = 8e-14 Identities = 46/47 (97%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattca 57 |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 147825 tccttttgcattgaaataacaaattgaaatcaaaataatatgattca 147871
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 85.7 bits (43), Expect = 8e-14 Identities = 46/47 (97%) Strand = Plus / Plus Query: 11 tccttttgcattgaaataacaaattgaaataaaaataatatgattca 57 |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 55587 tccttttgcattgaaataacaaattgaaatcaaaataatatgattca 55633
>gb|M60179.1|OBECPRPA O.ammophila ribosomal protein L14 and L16 (rpl14, rpl16) genes, 3' end and 5' end Length = 542 Score = 85.7 bits (43), Expect = 8e-14 Identities = 114/137 (83%), Gaps = 3/137 (2%) Strand = Plus / Minus Query: 40 taaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcg 99 ||||||| |||||||||||||||| |||| ||| ||||| || || || ||||| ||||| Sbjct: 134 taaaaatgatatgattcaacctcaaacccgtttgaatgtcgcggataacagtggggctcg 75 Query: 100 aaaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattgg 159 | |||| |||||||||||| |||| ||| ||| |||||| |||||||||| ||| || Sbjct: 74 agaattaatgtgtattcgaatcatcgga---gctagtaatcgtcgatatgctcatatcgg 18 Query: 160 tgatgttattgttgctg 176 ||| |||||||||||| Sbjct: 17 tgacattattgttgctg 1
>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091C18 Length = 154416 Score = 83.8 bits (42), Expect = 3e-13 Identities = 73/82 (89%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 257 ttcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttataattgat 316 |||||||||||||||||||||||||| |||||||| ||| |||||||||||| |||||| Sbjct: 130233 ttcaaatgcgaagacggtataataatacgctatgacaacagtgctgcggttatcattgat 130174 Query: 317 caaaaaggcaacccaaaaggaa 338 ||||||| || ||||| |||| Sbjct: 130173 -aaaaagggaatccaaatggaa 130153
>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H03 Length = 189893 Score = 83.8 bits (42), Expect = 3e-13 Identities = 73/82 (89%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 257 ttcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttataattgat 316 |||||||||||||||||||||||||| |||||||| ||| |||||||||||| |||||| Sbjct: 67003 ttcaaatgcgaagacggtataataatacgctatgacaacagtgctgcggttatcattgat 66944 Query: 317 caaaaaggcaacccaaaaggaa 338 ||||||| || ||||| |||| Sbjct: 66943 -aaaaagggaatccaaatggaa 66923
>dbj|AB087469.1| Anthoceros formosae chloroplast rpl14 mRNA for ribosomal protein L14, complete cds Length = 460 Score = 81.8 bits (41), Expect = 1e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 70 tttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcga 118 |||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 370 tttaaatgtagcagacaacagtggagctcgaaaactgatgtgtattcga 322 Score = 65.9 bits (33), Expect = 8e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 200 atgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgtaaagaa 256 ||||||||| ||| ||| |||||| || ||||||||||||||||||| ||||||||| Sbjct: 243 atgcctctaaaaaaatcagaagtagttagagctgtaattgtacgtacttgtaaagaa 187
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 81.8 bits (41), Expect = 1e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 70 tttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcga 118 |||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 100069 tttaaatgtagcagacaacagtggagctcgaaaactgatgtgtattcga 100021 Score = 65.9 bits (33), Expect = 8e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 200 atgcctctagaaagatccgaagtaattcgagctgtaattgtacgtacatgtaaagaa 256 ||||||||| ||| ||| |||||| || ||||||||||||||||||| ||||||||| Sbjct: 99942 atgcctctaaaaaaatcagaagtagttagagctgtaattgtacgtacttgtaaagaa 99886
>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1046_F10 Length = 118472 Score = 79.8 bits (40), Expect = 5e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 257 ttcaaatgcgaagacggtataataatccgctatgatgacaatgc 300 |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 87726 ttcaaatgcgaagacggtataataatacgctatgatgacaatgc 87769
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 77.8 bits (39), Expect = 2e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 ||||| || |||||||||||||| || ||||||||| ||||| ||||||||||||||| Sbjct: 76630 aaaaaaaaaatgattcaacctcaaacttatttaaatgttgcagataatagtggagctcga 76571 Query: 101 aaattgatgtgtattcgagtcatagga 127 ||| | ||||| |||||||| |||||| Sbjct: 76570 aaactaatgtgcattcgagttatagga 76544 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 228 gagctgtaattgtacgtacatgtaaagaatt 258 ||||||||||||||||||| ||||||||||| Sbjct: 76446 gagctgtaattgtacgtacgtgtaaagaatt 76416
>emb|AL662985.3|OSJN00189 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095H06, complete sequence Length = 126447 Score = 77.8 bits (39), Expect = 2e-11 Identities = 73/84 (86%), Gaps = 4/84 (4%) Strand = Plus / Minus Query: 175 tgtaatcaaagacgcattgccccaaatgcctctagaaagatccga----agtaattcgag 230 ||||| |||||| ||| ||||| ||||||||||||||||||| || ||||| |||| Sbjct: 89446 tgtaaccaaagaagcagtgcccaaaatgcctctagaaagatcagacagaagtaagacgag 89387 Query: 231 ctgtaattgtacgtacatgtaaag 254 |||||||||||||||||||||||| Sbjct: 89386 ctgtaattgtacgtacatgtaaag 89363
>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence, complete sequence Length = 27470 Score = 75.8 bits (38), Expect = 8e-11 Identities = 72/82 (87%), Gaps = 1/82 (1%) Strand = Plus / Plus Query: 257 ttcaaatgcgaagacggtataataatccgctatgatgacaatgctgcggttataattgat 316 ||||||||||||||| |||||||||| |||||||| |||| |||| ||||||| |||||| Sbjct: 5205 ttcaaatgcgaagacagtataataatacgctatgacgacagtgctacggttatcattgat 5264 Query: 317 caaaaaggcaacccaaaaggaa 338 ||||||| || ||||| |||| Sbjct: 5265 -aaaaaggaaatccaaatggaa 5285
>dbj|AB077439.1| Sophora alopecuroides plastid DNA, intron region Length = 569 Score = 73.8 bits (37), Expect = 3e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 41 aaaaataatatgattcaacctcagacccttttaaatg 77 ||||||||||||||||||||||||||||||||||||| Sbjct: 525 aaaaataatatgattcaacctcagacccttttaaatg 561
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 73.8 bits (37), Expect = 3e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgatg 109 |||||||||||||| | |||||| ||| ||||||| ||||||||||||||||||||| Sbjct: 79781 atgattcaacctcaaagttatttaaaagtaacagacaacagtggagctcgaaaattgatg 79722 Query: 110 tgtattcga 118 ||||||||| Sbjct: 79721 tgtattcga 79713
>emb|X68048.1|CHPVHISG Phaseolus vulgaris chloroplast DNA for tRNA-His gene region Length = 1698 Score = 71.9 bits (36), Expect = 1e-09 Identities = 108/132 (81%) Strand = Plus / Minus Query: 207 tagaaagatccgaagtaattcgagctgtaattgtacgtacatgtaaagaattcaaatgcg 266 |||||||||| ||||| || |||||||||||||||| || |||||| || | ||| | Sbjct: 1168 tagaaagatcagaagtgatcagagctgtaattgtacggacttgtaaacaactaaaacgta 1109 Query: 267 aagacggtataataatccgctatgatgacaatgctgcggttataattgatcaaaaaggca 326 ||||||||||||| | |||||||| |||||||| ||| ||||||||||| |||| | Sbjct: 1108 gcaacggtataataattcagtatgatgataatgctgcagttgtaattgatcaagaaggaa 1049 Query: 327 acccaaaaggaa 338 | |||||||||| Sbjct: 1048 atccaaaaggaa 1037 Score = 42.1 bits (21), Expect = 1.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 41 aaaaataatatgattcaacctcagacccttttaaatg 77 |||||| |||||||||||||||| || | |||||||| Sbjct: 1332 aaaaatgatatgattcaacctcaaactcatttaaatg 1296
>gb|M80799.1|VIRCPRPL Vigna unguiculata chloroplast ribosomal protein (L16 and L14) genes, 3' and 5' end respectively Length = 1268 Score = 67.9 bits (34), Expect = 2e-08 Identities = 117/144 (81%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 |||||| |||||||||||||||| || | ||| |||||||| || || || ||||| || Sbjct: 1118 aaaaatgatatgattcaacctcaaactcatttgaatgtagcggataacagcggagcacgt 1177 Query: 101 aaattgatgtgtattcgagtcataggagctgctggtaatcagcgatatgctcgtattggt 160 || |||||||||||||| || ||||| ||| |||||| ||||||||| |||||| Sbjct: 1178 gaactgatgtgtattcgaatcctagga---gctagtaatcgacgatatgcttatattggc 1234 Query: 161 gatgttattgttgctgtaatcaaa 184 || || ||||||||||||||||| Sbjct: 1235 gacattgttgttgctgtaatcaaa 1258
>dbj|AB077337.1| Saussurea involucrata plastid DNA, intron region Length = 541 Score = 65.9 bits (33), Expect = 8e-08 Identities = 36/37 (97%) Strand = Plus / Plus Query: 41 aaaaataatatgattcaacctcagacccttttaaatg 77 |||||| |||||||||||||||||||||||||||||| Sbjct: 497 aaaaatcatatgattcaacctcagacccttttaaatg 533
>emb|X03834.1|CHSOL16 Spirodela oligorhiza chloroplast gene for ribosomal protein L16 Length = 2064 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagc 81 |||||| ||||||||||||||||||||||||| |||||||| Sbjct: 2009 aaaaatgatatgattcaacctcagacccttttgaatgtagc 2049
>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506A10 Length = 145265 Score = 63.9 bits (32), Expect = 3e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 228 gagctgtaattgtacgtacatgtaaagaattcaaatgcgaagacggtataataatccgct 287 |||| |||||||||||||||||||||||| ||||| | || ||||||| ||||| || | Sbjct: 127184 gagcagtaattgtacgtacatgtaaagaactcaaacgtgacaacggtatgataatacgat 127243 Query: 288 atgatgac 295 |||||||| Sbjct: 127244 atgatgac 127251
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 70 tttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcgagt 120 |||||||||||| || |||||||| ||||| ||||| |||||||||||||| Sbjct: 140505 tttaaatgtagctgataatagtggtgctcgcaaattaatgtgtattcgagt 140455
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 41 aaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 100 ||||| || |||||||||||||| || |||||||||||| || ||||||||||| || Sbjct: 80288 aaaaaaaaaatgattcaacctcaaacttatttaaatgtagctgataatagtggagcgcgc 80229 Query: 101 aaattgatgtgtat 114 ||||| |||||||| Sbjct: 80228 aaattaatgtgtat 80215
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 46 taatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaatt 105 |||||||||||||||||| || | |||| || ||||| ||||||||||| |||||||| Sbjct: 16411 taatatgattcaacctcaaacatatgtaaacgtcgcagataatagtggagcacgaaaatt 16470 Query: 106 gatgtgtat 114 |||||||| Sbjct: 16471 aatgtgtat 16479
>dbj|AB077335.1| Allium altaicum plastid DNA, intron region Length = 551 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 49 tatgattcaacctcagacccttttaaatg 77 ||||||||||||||||||||||||||||| Sbjct: 515 tatgattcaacctcagacccttttaaatg 543
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 56.0 bits (28), Expect = 8e-05 Identities = 58/68 (85%) Strand = Plus / Plus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgatg 109 ||||||||||||||| | |||||||||||| ||||| || ||||||||||| | ||| Sbjct: 41120 atgattcaacctcagtcttatttaaatgtagccgacaacagcggagctcgaaagctcatg 41179 Query: 110 tgtattcg 117 |||||||| Sbjct: 41180 tgtattcg 41187
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 70 tttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcg 117 |||| |||||||||| ||||| |||||||| || |||||||||||||| Sbjct: 76715 tttagatgtagcagataatagcggagctcgcaagttgatgtgtattcg 76668
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 70 tttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcg 117 ||||||||||||||| |||||||| ||||| |||| ||||||||||| Sbjct: 28942 tttaaatgtagcagataatagtggtgctcgtgaattaatgtgtattcg 28989 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 227 cgagctgtaattgtacgtacatgtaaag 254 |||||||| |||||||||||| |||||| Sbjct: 29096 cgagctgttattgtacgtacacgtaaag 29123
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 56.0 bits (28), Expect = 8e-05 Identities = 61/72 (84%) Strand = Plus / Plus Query: 47 aatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattg 106 ||||||||||||||||| || ||| |||||||||||||| ||||||||| |||| Sbjct: 5214 aatatgattcaacctcaaacgtatttgaatgtagcagacaacagtggagctaaaaaacca 5273 Query: 107 atgtgtattcga 118 |||||||||||| Sbjct: 5274 atgtgtattcga 5285
>dbj|AB077365.1| Iris dichotoma plastid DNA, intron region Length = 566 Score = 56.0 bits (28), Expect = 8e-05 Identities = 52/60 (86%), Gaps = 5/60 (8%) Strand = Plus / Plus Query: 18 gcattgaaataacaaattgaaataaaaataatatgattcaacctcagacccttttaaatg 77 ||||||||||||| ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 504 gcattgaaataacggattcaaataaaa-----atgattcaacctcagacccttttaaatg 558
>emb|X14062.1|CHCRL14 Chlamydomonas reinhardtii plasti gene for ribosomal protein L14 Length = 988 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 70 tttaaatgtagcagacaatagtggagctcgaaaattgatgtgtattcg 117 ||||||||||||||| |||||||| ||||| |||| ||||||||||| Sbjct: 541 tttaaatgtagcagataatagtggtgctcgtgaattaatgtgtattcg 588 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 227 cgagctgtaattgtacgtacatgtaaag 254 |||||||| |||||||||||| |||||| Sbjct: 695 cgagctgttattgtacgtacacgtaaag 722
>gb|M30487.1|CPACYRP Cyanophora paradoxa ribosomal protein l22 (rpl22) gene, partial cds; ribosomal protein s3 (rps3), ribosomal protein l16 (rpl16), ribosomal protein l7 (rpl7), ribosomal protein l14 (rpl14), ribosomal protein l5 (rpl5), ribosomal protein s8 (rps8), ribosomal protein l6 (rpl6), ribosomal protein l18 (rpl18), ribosomal protein s5 (rps5), and ribosomal protein secY (secY) genes, complete cds; and ORF gene, partial cds Length = 6468 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 86 aatagtggagctcgaaaattgatgtgtattcgagt 120 |||||||||||||| ||||| |||||||||||||| Sbjct: 1710 aatagtggagctcgtaaattaatgtgtattcgagt 1744 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 146 tatgctcgtattggtgatgttattgttgctgta 178 |||||||| ||||||||||| ||||| |||||| Sbjct: 1767 tatgctcgaattggtgatgtaattgtcgctgta 1799
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 86 aatagtggagctcgaaaattgatgtgtattcgagt 120 |||||||||||||| ||||| |||||||||||||| Sbjct: 52512 aatagtggagctcgtaaattaatgtgtattcgagt 52478 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 146 tatgctcgtattggtgatgttattgttgctgta 178 |||||||| ||||||||||| ||||| |||||| Sbjct: 52455 tatgctcgaattggtgatgtaattgtcgctgta 52423
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 74 aatgtagcagacaatagtggagctcgaaaattgatgtgtat 114 ||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 879293 aatgtcgcagacaatagcggcgctcgtaaattgatgtgtat 879333
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Minus Query: 74 aatgtagcagacaatagtggagctcgaaaattgatgtgtat 114 ||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 5047052 aatgtcgcagacaatagcggcgctcgtaaattgatgtgtat 5047012
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 48.1 bits (24), Expect = 0.018 Identities = 45/52 (86%) Strand = Plus / Plus Query: 50 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaa 101 |||||||||||||| | |||||||||||| || |||||||||||||||| Sbjct: 94442 atgattcaacctcaatcttatttaaatgtagccgataatagtggagctcgaa 94493
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 48.1 bits (24), Expect = 0.018 Identities = 36/40 (90%) Strand = Plus / Minus Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattg 170 ||||||||||| ||||||||| ||||||||| ||||||| Sbjct: 98780 gctggtaatcactgatatgctcatattggtgacgttattg 98741
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 48.1 bits (24), Expect = 0.018 Identities = 36/40 (90%) Strand = Plus / Plus Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattg 170 ||||||||||| ||||||||| ||||||||| ||||||| Sbjct: 11796105 gctggtaatcactgatatgctcatattggtgacgttattg 11796144
>dbj|AB077333.1| Ferula feruloides plastid DNA, intron region Length = 531 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 54 ttcaacctcagacccttttaaatg 77 |||||||||||||||||||||||| Sbjct: 500 ttcaacctcagacccttttaaatg 523
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 48.1 bits (24), Expect = 0.018 Identities = 36/40 (90%) Strand = Plus / Plus Query: 131 gctggtaatcagcgatatgctcgtattggtgatgttattg 170 ||||||||||| ||||||||| ||||||||| ||||||| Sbjct: 11874516 gctggtaatcactgatatgctcatattggtgacgttattg 11874555
>ref|NM_128441.3| Arabidopsis thaliana structural constituent of ribosome AT2G28820 mRNA, complete cds Length = 1156 Score = 46.1 bits (23), Expect = 0.072 Identities = 32/35 (91%) Strand = Plus / Plus Query: 146 tatgctcgtattggtgatgttattgttgctgtaat 180 ||||||| ||||||||||||| ||||||| ||||| Sbjct: 965 tatgctcatattggtgatgttgttgttgccgtaat 999
>gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map mi54, complete sequence Length = 107097 Score = 46.1 bits (23), Expect = 0.072 Identities = 32/35 (91%) Strand = Plus / Minus Query: 146 tatgctcgtattggtgatgttattgttgctgtaat 180 ||||||| ||||||||||||| ||||||| ||||| Sbjct: 38123 tatgctcatattggtgatgttgttgttgccgtaat 38089
>gb|AY219111.2| Arabidopsis thaliana hypothetical protein (At2g28820/F8N16.11) mRNA, complete cds Length = 1179 Score = 46.1 bits (23), Expect = 0.072 Identities = 32/35 (91%) Strand = Plus / Plus Query: 146 tatgctcgtattggtgatgttattgttgctgtaat 180 ||||||| ||||||||||||| ||||||| ||||| Sbjct: 968 tatgctcatattggtgatgttgttgttgccgtaat 1002
>gb|AC157473.1| Medicago truncatula chromosome 7 BAC clone mte1-11e4, complete sequence Length = 125310 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 54 ttcaacctcagacccttttaaat 76 ||||||||||||||||||||||| Sbjct: 65402 ttcaacctcagacccttttaaat 65424
>emb|BX936340.7| Zebrafish DNA sequence from clone CH211-286P18 in linkage group 12, complete sequence Length = 85745 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 20 attgaaataacaaattgaaataaaaa 45 |||||||||| ||||||||||||||| Sbjct: 25439 attgaaataaaaaattgaaataaaaa 25464
>gb|AC119410.20| Medicago truncatula clone mth2-13n10, complete sequence Length = 108232 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 aaataacaaattgaaataaaaa 45 |||||||||||||||||||||| Sbjct: 53979 aaataacaaattgaaataaaaa 54000
>dbj|AB077440.1| Incarvillea potaninii plastid DNA, intron region Length = 536 Score = 44.1 bits (22), Expect = 0.29 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 48 atatgattcaacctcagacccttttaaatg 77 ||||||||||||||||| |||||||||||| Sbjct: 500 atatgattcaacctcag-cccttttaaatg 528
>dbj|AB077334.1| Zygophyllum pterocarpum plastid DNA, intron region Length = 553 Score = 44.1 bits (22), Expect = 0.29 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 48 atatgattcaacctcagacccttttaaatg 77 ||||||||||||||||| |||||||||||| Sbjct: 517 atatgattcaacctcag-cccttttaaatg 545
>gb|AC024794.1| Caenorhabditis elegans cosmid Y48G1BM, complete sequence Length = 35030 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 aaattgaaataaaaataatat 51 ||||||||||||||||||||| Sbjct: 15162 aaattgaaataaaaataatat 15142
>gb|AC024817.1| Caenorhabditis elegans cosmid Y54G2A, complete sequence Length = 286680 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 aaattgaaataaaaataatat 51 ||||||||||||||||||||| Sbjct: 163617 aaattgaaataaaaataatat 163597
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 tcaaaaaggcaacccaaaagg 336 ||||||||||||||||||||| Sbjct: 1617565 tcaaaaaggcaacccaaaagg 1617545
>gb|AC120856.6| Mus musculus chromosome 1, clone RP23-284B21, complete sequence Length = 261249 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tgaaataaaaataatatgatt 55 ||||||||||||||||||||| Sbjct: 119445 tgaaataaaaataatatgatt 119425
>emb|CR293498.12| Zebrafish DNA sequence from clone DKEY-5I16 in linkage group 23, complete sequence Length = 147189 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 attgaaataacaaattgaaataaaa 44 ||||||||||||| ||||||||||| Sbjct: 136352 attgaaataacaagttgaaataaaa 136328
>emb|BX927290.22| Zebrafish DNA sequence from clone CH211-212K5 in linkage group 14, complete sequence Length = 222032 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 attgaaataacaaattgaaataaaa 44 ||||||||||||| ||||||||||| Sbjct: 175591 attgaaataacaagttgaaataaaa 175567
>emb|BX000981.34| Zebrafish DNA sequence from clone DKEY-9P20 in linkage group 14, complete sequence Length = 236476 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 20 attgaaataacaaattgaaataaaa 44 ||||||||||||| ||||||||||| Sbjct: 150787 attgaaataacaatttgaaataaaa 150811
>gb|AC073112.6| Homo sapiens BAC clone RP11-555P19 from 7, complete sequence Length = 102932 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 23 gaaataacaaattgaaataaaaataatat 51 ||||||| |||||||||||| |||||||| Sbjct: 94843 gaaataataaattgaaataataataatat 94815
>ref|XM_503361.1| Yarrowia lipolytica CLIB122, YALI0E00154g predicted mRNA Length = 2382 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 tggtgatgttattgttgctgt 177 ||||||||||||||||||||| Sbjct: 283 tggtgatgttattgttgctgt 263
>emb|AL355355.25| Human DNA sequence from clone RP11-730A19 on chromosome 10 Contains the 5' end of a novel gene (DKFZP761F241) (FLJ20925 FLJ38473), a ribosomal protein L5 (RPL5) pseudogene, the OPTN gene for optineurin, a small nuclear ribonucleoprotein polypeptide G (SNRPG) pseudogene, a pseudogene similar to part of COX10 homolog, cytochrome c oxidase assembly protein heme A: farnesyltransferase (yeast) (COX10), a novel pseudogene (FLJ10648 KIAA1525), a ribosomal protein L36A (RPL36A) pseudogene, the 5' end of the MCM10 gene for MCM10 minichromosome maintenance deficient 10 (S. cerevisiae), a pseudogene similar to part of chromodomain protein Y chromosome 1 (CDY1) and two CpG islands, complete sequence Length = 196203 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 attgaaataacaaattgaaat 40 ||||||||||||||||||||| Sbjct: 148045 attgaaataacaaattgaaat 148025
>emb|AL139340.12| Human DNA sequence from clone RP11-7F3 on chromosome 10, complete sequence Length = 187316 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 acaaattgaaataaaaataat 49 ||||||||||||||||||||| Sbjct: 87726 acaaattgaaataaaaataat 87706
>emb|AL136109.11| Human DNA sequence from clone RP5-924G13 on chromosome 1 Contains a novel gene (KIAA1221) and a ribosomal protein L5 (RPL5) pseudogene, complete sequence Length = 126367 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 24 aaataacaaattgaaataaaaataa 48 |||||| |||||||||||||||||| Sbjct: 20437 aaataagaaattgaaataaaaataa 20413
>emb|BX957251.3| Zebrafish DNA sequence from clone CH211-152L15 in linkage group 23, complete sequence Length = 120410 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 attgaaataacaaattgaaataaaa 44 ||||||||||||| ||||||||||| Sbjct: 111762 attgaaataacaagttgaaataaaa 111738
>emb|BX537137.13| Zebrafish DNA sequence from clone DKEYP-87D1 in linkage group 20 Contains two novel genes and two CpG islands, complete sequence Length = 200339 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 20 attgaaataacaaattgaaataaaa 44 ||||||||||||| ||||||||||| Sbjct: 109494 attgaaataacaagttgaaataaaa 109518
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 tttgcattgaaataacaaattgaaa 39 ||||||||||||| ||||||||||| Sbjct: 83672 tttgcattgaaattacaaattgaaa 83648
>emb|CR354380.7| Zebrafish DNA sequence from clone CH211-182L2 in linkage group 1, complete sequence Length = 165344 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 ttgaaataacaaattgaaataaaaa 45 ||||||||| ||||||||||||||| Sbjct: 8520 ttgaaataaaaaattgaaataaaaa 8544
>emb|BX511182.12| Zebrafish DNA sequence from clone DKEY-26H11 in linkage group 17, complete sequence Length = 155243 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 attgaaataacaaattgaaataaaa 44 ||||||||||||| ||||||||||| Sbjct: 134725 attgaaataacaagttgaaataaaa 134701 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 attgaaataacaaattgaaataaa 43 ||||||||||||| |||||||||| Sbjct: 29208 attgaaataacaatttgaaataaa 29185
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 42.1 bits (21), Expect = 1.1 Identities = 57/69 (82%) Strand = Plus / Plus Query: 49 tatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaaattgat 108 |||||||| |||||| || ||||||||||||| || ||||| || || ||||||||| Sbjct: 31365 tatgattcgacctcaaactattttaaatgtagctgataatagcggtgcaaaaaaattgat 31424 Query: 109 gtgtattcg 117 ||| ||||| Sbjct: 31425 gtgcattcg 31433
>gb|AC091614.3| Homo sapiens chromosome 1 clone RP4-665J23, complete sequence Length = 107764 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 24 aaataacaaattgaaataaaaataa 48 |||||| |||||||||||||||||| Sbjct: 104436 aaataagaaattgaaataaaaataa 104412
>gb|AC091060.10| Homo sapiens chromosome 18, clone RP11-723J4, complete sequence Length = 221941 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 aattgaaataaaaataatatg 52 ||||||||||||||||||||| Sbjct: 29612 aattgaaataaaaataatatg 29592
>gb|AC008626.6| Homo sapiens chromosome 19 clone CTB-159G17, complete sequence Length = 155439 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 aacaaattgaaataaaaataa 48 ||||||||||||||||||||| Sbjct: 112319 aacaaattgaaataaaaataa 112339
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 89 agtggagctcgaaaattgatgtgtattcgagtcataggagc 129 |||||||| |||||| | |||||||||||||| ||||||| Sbjct: 58983 agtggagcccgaaaaataatgtgtattcgagttctaggagc 58943
>gb|AC139618.3| Homo sapiens 3 BAC RP11-320G10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 140884 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 aaataacaaattgaaataaaa 44 ||||||||||||||||||||| Sbjct: 82169 aaataacaaattgaaataaaa 82189
>gb|AF283525.1|AF283519S7 Homo sapiens FIP2 gene, exons 11, 12 and 13 Length = 5047 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 attgaaataacaaattgaaat 40 ||||||||||||||||||||| Sbjct: 171 attgaaataacaaattgaaat 151
>gb|AC154121.6| Mus musculus chromosome 1, clone RP24-93A17, complete sequence Length = 228353 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tgaaataaaaataatatgatt 55 ||||||||||||||||||||| Sbjct: 46015 tgaaataaaaataatatgatt 46035
>dbj|AP004038.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_H01 Length = 121377 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 290 gatgacaatgctgcggttataattgatcaaaaaggcaacccaaaaggaa 338 ||||||||||| ||||||| |||| ||||||| | || |||||||||| Sbjct: 117579 gatgacaatgcaacggttatcattggtcaaaaaagaaatccaaaaggaa 117531
>dbj|AK120872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026M09, full insert sequence Length = 5675 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 tttgcattgaaataacaaattgaaa 39 ||||||||||||| ||||||||||| Sbjct: 2511 tttgcattgaaattacaaattgaaa 2487
>emb|CR450840.18| Zebrafish DNA sequence from clone CH211-261D9 in linkage group 14, complete sequence Length = 194617 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 20 attgaaataacaaattgaaataaaa 44 ||||||||||||| ||||||||||| Sbjct: 99157 attgaaataacaagttgaaataaaa 99181
>gb|AF050665.1|AF050665 Spirogyra maxima tRNA-Ile gene, complete sequence; and ribosomal protein L23 (rpl23), ribosomal protein L2 (rpl2), ribosomal protein S19 (rps19), ribosomal protein L22 (rpl22), ribosomal protein S3 (rps3), ribosomal protein L16 (rpl16), ribosomal protein L14 (rpl14), ribosomal protein S8 (rps8), initiation factor A (infA), ribosomal protein L36 (rpl36), ribosomal protein S11 (rps11), and RNA polymerase alpha subunit (rpoA) genes, complete cds, chloroplast genes for chloroplast products Length = 8794 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 89 agtggagctcgaaaattgatgtgtattcg 117 ||||||||||| ||||| ||||||||||| Sbjct: 5262 agtggagctcgtaaattaatgtgtattcg 5290
>gb|AC154565.2| Mus musculus BAC clone RP23-403J19 from chromosome 16, complete sequence Length = 202981 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 aaataaaaataatatgattca 57 ||||||||||||||||||||| Sbjct: 148414 aaataaaaataatatgattca 148394
>emb|AL845295.21| Zebrafish DNA sequence from clone DKEY-285E18 in linkage group 4, complete sequence Length = 162785 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 attgaaataacaaattgaaataaaa 44 ||||||||||||| ||||||||||| Sbjct: 69183 attgaaataacaagttgaaataaaa 69159
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 77 gtagcagacaatagtggagctcgaaaattgatgtgtattcg 117 |||||||| |||||||| ||| ||||| | ||||||||||| Sbjct: 101039 gtagcagataatagtggcgctagaaaaataatgtgtattcg 100999
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 tggtgatgttattgttgctgt 177 ||||||||||||||||||||| Sbjct: 6075 tggtgatgttattgttgctgt 6095
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 89 agtggagctcgaaaattgatgtgtattcgagtcataggagc 129 |||||||| |||||| | |||||||||||||| ||||||| Sbjct: 60887 agtggagcccgaaaaataatgtgtattcgagttctaggagc 60847
>ref|XM_639569.1| Dictyostelium discoideum histidine kinase (DDB0185039), partial mRNA Length = 5211 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 tggtgatgttattgttgctg 176 |||||||||||||||||||| Sbjct: 1446 tggtgatgttattgttgctg 1427
>ref|XM_639498.1| Dictyostelium discoideum histidine kinase DhkI (DDB0217151), partial mRNA Length = 5211 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 tggtgatgttattgttgctg 176 |||||||||||||||||||| Sbjct: 1446 tggtgatgttattgttgctg 1427
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 tgaaataaaaataatatgat 54 |||||||||||||||||||| Sbjct: 789839 tgaaataaaaataatatgat 789858
>gb|AF038611.2| Caenorhabditis elegans cosmid E04A4, complete sequence Length = 23046 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aattgaaataaaaataatat 51 |||||||||||||||||||| Sbjct: 1131 aattgaaataaaaataatat 1112
>gb|AC099415.4| Mus musculus BAC clone RP23-122D8 from chromosome 8, complete sequence Length = 215488 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 aataacaaattgaaataaaaataa 48 ||||| |||||||||||||||||| Sbjct: 112111 aataaaaaattgaaataaaaataa 112088
>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome Length = 1937111 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 attgttgctgtaatcaaaga 186 |||||||||||||||||||| Sbjct: 129147 attgttgctgtaatcaaaga 129128
>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence Length = 141360 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tttaaatgtagcagacaata 89 |||||||||||||||||||| Sbjct: 112756 tttaaatgtagcagacaata 112737
>gb|AC121151.11| Mus musculus chromosome 17, clone RP24-342C2, complete sequence Length = 205467 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 attgaaataaaaataatatg 52 |||||||||||||||||||| Sbjct: 27744 attgaaataaaaataatatg 27725
>gb|U70855.2| Caenorhabditis elegans cosmid K08F11, complete sequence Length = 26520 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aattgaaataaaaataatat 51 |||||||||||||||||||| Sbjct: 26351 aattgaaataaaaataatat 26332
>gb|AC146008.3| Pan troglodytes BAC clone RP43-13N15 from 7, complete sequence Length = 151195 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aaattgaaataaaaataata 50 |||||||||||||||||||| Sbjct: 122613 aaattgaaataaaaataata 122632
>emb|CT025560.9| Mouse DNA sequence from clone RP23-432N22 on chromosome 16, complete sequence Length = 212903 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 acccttttaaatgtagcaga 84 |||||||||||||||||||| Sbjct: 68148 acccttttaaatgtagcaga 68129
>emb|CR450788.7| Zebrafish DNA sequence from clone DKEY-15P23 in linkage group 12, complete sequence Length = 115480 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 aagaattcaaatgcgaagac 271 |||||||||||||||||||| Sbjct: 71950 aagaattcaaatgcgaagac 71969
>emb|AL935274.14| Zebrafish DNA sequence from clone CH211-249C2 in linkage group 4, complete sequence Length = 121896 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 attgaaataacaaattgaaataaa 43 ||||||||||||| |||||||||| Sbjct: 42454 attgaaataacaatttgaaataaa 42477
>emb|CR812792.16| Zebrafish DNA sequence from clone DKEY-33J18 in linkage group 4, complete sequence Length = 123987 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 attgaaataacaaattgaaataaa 43 ||||||||||||| |||||||||| Sbjct: 82918 attgaaataacaatttgaaataaa 82895
>emb|BX950868.13| Zebrafish DNA sequence from clone DKEY-54I3 in linkage group 5, complete sequence Length = 204339 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 attgaaataacaaattgaaataaa 43 ||||||||||||| |||||||||| Sbjct: 196257 attgaaataacaatttgaaataaa 196234
>emb|Z78061.1|CEC48G7 Caenorhabditis elegans Cosmid C48G7, complete sequence Length = 30608 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aaattgaaataaaaataata 50 |||||||||||||||||||| Sbjct: 20639 aaattgaaataaaaataata 20658
>gb|AC122366.3| Mus musculus BAC clone RP23-447K15 from 14, complete sequence Length = 175591 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 tgaaataacaaattgaaataaaaa 45 |||||||| ||||||||||||||| Sbjct: 103143 tgaaataataaattgaaataaaaa 103166
>gb|AC134521.41| Medicago truncatula clone mth2-31k24, complete sequence Length = 132267 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 taacaaattgaaataaaaataata 50 ||||||||||||| |||||||||| Sbjct: 65408 taacaaattgaaagaaaaataata 65431
>emb|BX005436.12| Zebrafish DNA sequence from clone DKEY-9A8 in linkage group 6, complete sequence Length = 168549 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 tgttattgttgctgtaatca 182 |||||||||||||||||||| Sbjct: 82920 tgttattgttgctgtaatca 82901
>emb|AL358234.14| Human DNA sequence from clone RP11-164A7 on chromosome 10 Contains the 5' end of the WAC gene for WW domain-containing adapter with a coiled-coil region (PRO1741, FLJ31290, KIAA1844, MGC10753), the 5' end of a novel gene and a CpG island, complete sequence Length = 103930 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 acaaattgaaataaaaataa 48 |||||||||||||||||||| Sbjct: 41426 acaaattgaaataaaaataa 41407
>emb|BX276184.16| Zebrafish DNA sequence from clone CH211-236E20 in linkage group 17, complete sequence Length = 161442 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 attgaaataacaaattgaaataaa 43 ||||||||||||| |||||||||| Sbjct: 28062 attgaaataacaatttgaaataaa 28085
>gb|AC090396.9| Homo sapiens chromosome 18, clone RP11-868G15, complete sequence Length = 215375 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aattgaaataaaaataatat 51 |||||||||||||||||||| Sbjct: 86572 aattgaaataaaaataatat 86591
>emb|BX323594.6| Zebrafish DNA sequence from clone CH211-233H3 in linkage group 8, complete sequence Length = 23416 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 attgaaataacaaattgaaataaa 43 ||||||||||||| |||||||||| Sbjct: 4342 attgaaataacaatttgaaataaa 4365
>gb|AC146768.3| Callithrix jacchus clone CH259-491G15, complete sequence Length = 119777 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 tgaaataaaaataatatgat 54 |||||||||||||||||||| Sbjct: 30112 tgaaataaaaataatatgat 30131
>gb|AC012031.17| Homo sapiens 3 BAC RP11-91K9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157639 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gaaataaaaataatatgatt 55 |||||||||||||||||||| Sbjct: 47694 gaaataaaaataatatgatt 47675
>emb|BX000701.25| Zebrafish DNA sequence from clone CH211-18I3 in linkage group 3, complete sequence Length = 181568 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 attgaaataacaaattgaaataaa 43 ||||||||||||| |||||||||| Sbjct: 58981 attgaaataacaatttgaaataaa 58958
>emb|BX649516.8| Zebrafish DNA sequence from clone DKEY-51D8 in linkage group 14, complete sequence Length = 209974 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 attgaaataacaaattgaaataaa 43 ||||||||||||| |||||||||| Sbjct: 79765 attgaaataacaatttgaaataaa 79788
>gb|CP000268.1| Rhodoferax ferrireducens DSM 15236 plasmid1, complete sequence Length = 257447 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 agcgatatgctcgtattggt 160 |||||||||||||||||||| Sbjct: 204859 agcgatatgctcgtattggt 204840
>gb|AC166601.4| Nomascus leucogenys leucogenys clone CH271-401M10, complete sequence Length = 184404 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 tgaaataaaaataatatgat 54 |||||||||||||||||||| Sbjct: 23467 tgaaataaaaataatatgat 23486
>gb|AC091784.8| Genomic sequence for Mus musculus, clone RP23-213D23, complete sequence Length = 215410 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aaataaaaataatatgattc 56 |||||||||||||||||||| Sbjct: 130748 aaataaaaataatatgattc 130729
>gb|AC084197.1| Caenorhabditis elegans cosmid Y73B6BL, complete sequence Length = 216143 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 cattgaaataacaaattgaaataaaaat 46 |||||||| |||||||||||| |||||| Sbjct: 10835 cattgaaaaaacaaattgaaaaaaaaat 10862
>gb|AC108100.2| Homo sapiens chromosome 5 clone RP11-125A21, complete sequence Length = 85231 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ttgaaataacaaattgaaat 40 |||||||||||||||||||| Sbjct: 32573 ttgaaataacaaattgaaat 32554
>gb|AC010406.7| Homo sapiens chromosome 5 clone CTD-2154H6, complete sequence Length = 95089 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 acatgtaaagaattcaaatg 264 |||||||||||||||||||| Sbjct: 65720 acatgtaaagaattcaaatg 65739
>gb|AC008929.3| Homo sapiens chromosome 5, complete sequence Length = 125403 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aaattgaaataaaaataata 50 |||||||||||||||||||| Sbjct: 96384 aaattgaaataaaaataata 96403
>emb|BX855613.7| Zebrafish DNA sequence from clone CH211-208F21 in linkage group 14, complete sequence Length = 201273 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 attgaaataacaaattgaaataaa 43 ||||||||||||| |||||||||| Sbjct: 46906 attgaaataacaatttgaaataaa 46929
>emb|BX323888.8| Zebrafish DNA sequence from clone CH211-134G21 in linkage group 3, complete sequence Length = 178607 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 attgaaataacaaattgaaataaa 43 ||||||||||||| |||||||||| Sbjct: 107766 attgaaataacaatttgaaataaa 107789
>ref|XM_626883.1| Cryptosporidium parvum Iowa II putative phenylalanyl-tRNA synthetase (cgd3_3320), partial mRNA Length = 1545 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 5 tctttntccttttgcattgaaat 27 ||||| ||||||||||||||||| Sbjct: 699 tctttttccttttgcattgaaat 677
>gb|AC136037.2| Rattus norvegicus X BAC CH230-378N18 (Children's Hospital Oakland Research Institute) complete sequence Length = 98442 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 atgacaatgctgcggttataattg 314 |||||||||||| ||||||||||| Sbjct: 22785 atgacaatgctgaggttataattg 22762
>gb|AF362371.1|AF362371 Dictyostelium discoideum histidine kinase DhkI (dhkI) gene, complete cds Length = 6074 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 tggtgatgttattgttgctg 176 |||||||||||||||||||| Sbjct: 1685 tggtgatgttattgttgctg 1666
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 40.1 bits (20), Expect = 4.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 74 aatgtagcagacaatagtggagctcgaaaattgatgtgtattcg 117 ||||||||||| |||||||| ||| |||| | ||||||||||| Sbjct: 15814 aatgtagcagataatagtggcgctaaaaaaataatgtgtattcg 15771
>gb|AC146009.3| Pan troglodytes BAC clone RP43-13O12 from chromosome 7, complete sequence Length = 169801 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aaattgaaataaaaataata 50 |||||||||||||||||||| Sbjct: 112463 aaattgaaataaaaataata 112482
>gb|AC011322.29| Homo sapiens 3 BAC RP11-21N3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 69411 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 ataacaaattgaaataaaaataat 49 |||| ||||||||||||||||||| Sbjct: 17786 ataaaaaattgaaataaaaataat 17809
>gb|AC116305.2| Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence Length = 413138 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 24 aaataacaaattgaaataaaaataatat 51 |||| ||||||| ||||||||||||||| Sbjct: 224715 aaatcacaaattaaaataaaaataatat 224742
>gb|AC116330.2| Dictyostelium discoideum chromosome 2 map 3191214-3323468 strain AX4, complete sequence Length = 132254 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 tggtgatgttattgttgctg 176 |||||||||||||||||||| Sbjct: 42155 tggtgatgttattgttgctg 42174
>gb|AC009476.3| Homo sapiens BAC clone RP11-207O14 from 2, complete sequence Length = 184406 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aaattgaaataaaaataata 50 |||||||||||||||||||| Sbjct: 139348 aaattgaaataaaaataata 139367
>gb|AC010423.8| Homo sapiens chromosome 5 clone CTD-2193G5, complete sequence Length = 183787 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 acatgtaaagaattcaaatg 264 |||||||||||||||||||| Sbjct: 143601 acatgtaaagaattcaaatg 143582
>gb|AC116365.2| Homo sapiens chromosome 5 clone RP11-797O11, complete sequence Length = 117723 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 aaattgaaataaaaataata 50 |||||||||||||||||||| Sbjct: 117413 aaattgaaataaaaataata 117394
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 aataacaaattgaaataaaaataa 48 ||||| |||||||||||||||||| Sbjct: 168640 aataaaaaattgaaataaaaataa 168617
>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_F09 Length = 139371 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 aataacaaattgaaataaaaataa 48 ||||| |||||||||||||||||| Sbjct: 60420 aataaaaaattgaaataaaaataa 60397
>emb|AL929292.7| Zebrafish DNA sequence from clone DKEY-11L24 in linkage group 14, complete sequence Length = 218922 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaataacaaattgaaataaa 43 |||||||||||||||||||| Sbjct: 150738 aaataacaaattgaaataaa 150757
>gb|AC024864.1|AC024864 Caenorhabditis elegans clone Y74C9A, complete sequence Length = 47629 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aattgaaataaaaataatat 51 |||||||||||||||||||| Sbjct: 24350 aattgaaataaaaataatat 24331
>gb|AC024206.1| Caenorhabditis elegans cosmid Y74C9A, complete sequence Length = 47629 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aattgaaataaaaataatat 51 |||||||||||||||||||| Sbjct: 24350 aattgaaataaaaataatat 24331
>gb|AC007627.3|AC007627 Genomic Sequence For Arabidopsis thaliana Clone F15F15, Chromosome V, complete sequence Length = 157000 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 24 aaataacaaattgaaataaaaataatat 51 ||||||| | |||||||||||||||||| Sbjct: 115979 aaataaccatttgaaataaaaataatat 116006
>emb|BX465210.7| Zebrafish DNA sequence from clone CH211-266A5 in linkage group 4, complete sequence Length = 171708 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ataacaaattgaaataaaaa 45 |||||||||||||||||||| Sbjct: 43714 ataacaaattgaaataaaaa 43733
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 40.1 bits (20), Expect = 4.5 Identities = 59/72 (81%) Strand = Plus / Plus Query: 43 aaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcgaaa 102 |||| ||||||||||| ||||||| ||||| |||||| || || ||||||||| ||| Sbjct: 103706 aaattatatgattcaaactcagacttatttaactgtagctgataacagtggagctaaaaa 103765 Query: 103 attgatgtgtat 114 | | |||||||| Sbjct: 103766 aataatgtgtat 103777 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,845,832 Number of Sequences: 3902068 Number of extensions: 3845832 Number of successful extensions: 106968 Number of sequences better than 10.0: 256 Number of HSP's better than 10.0 without gapping: 270 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 105321 Number of HSP's gapped (non-prelim): 1590 length of query: 338 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 316 effective length of database: 17,147,199,772 effective search space: 5418515127952 effective search space used: 5418515127952 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)