| Clone Name | basd2b02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC131191.4| Mus musculus BAC clone RP24-464B16 from chromosome 18, complete sequence Length = 136832 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 88 ctccctcccttcactcccctcc 109 |||||||||||||||||||||| Sbjct: 56079 ctccctcccttcactcccctcc 56058
>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete sequence Length = 193184 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 88 ctccctcccttcactcccctcc 109 |||||||||||||||||||||| Sbjct: 161518 ctccctcccttcactcccctcc 161497
>gb|AC138156.3| Carollia perspicillata clone 41M6, complete sequence Length = 123894 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 tccctcccttcactcccctcc 109 ||||||||||||||||||||| Sbjct: 72418 tccctcccttcactcccctcc 72438
>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold Length = 1501503 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 tccctcccttcactcccctcc 109 ||||||||||||||||||||| Sbjct: 72418 tccctcccttcactcccctcc 72438
>emb|Z99756.7|HS100N22 Human DNA sequence from clone RP1-100N22 on chromosome 22q13.31-13.33, complete sequence Length = 81961 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 cgagccggccggccacgcccacac 52 ||||||||||||||| |||||||| Sbjct: 68741 cgagccggccggccaggcccacac 68718
>gb|AC099050.2| Homo sapiens chromosome 3 clone RP11-413B21, complete sequence Length = 174036 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 ttctccctcccttcactcccctcc 109 |||||||| ||||||||||||||| Sbjct: 40429 ttctcccttccttcactcccctcc 40406
>gb|AC013268.5| Homo sapiens BAC clone RP11-322F4 from 2, complete sequence Length = 206457 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tccctcccttcactcccctc 108 |||||||||||||||||||| Sbjct: 169792 tccctcccttcactcccctc 169773
>gb|AC154646.2| Mus musculus BAC clone RP23-283B12 from chromosome 14, complete sequence Length = 189102 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ctttctccctcccttcactc 103 |||||||||||||||||||| Sbjct: 42483 ctttctccctcccttcactc 42502
>gb|AC104564.11| Homo sapiens chromosome 17, clone RP11-68I3, complete sequence Length = 173058 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ctttctccctcccttcactc 103 |||||||||||||||||||| Sbjct: 122347 ctttctccctcccttcactc 122366 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,530,688 Number of Sequences: 3902068 Number of extensions: 1530688 Number of successful extensions: 121885 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 121815 Number of HSP's gapped (non-prelim): 70 length of query: 212 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 190 effective length of database: 17,147,199,772 effective search space: 3257967956680 effective search space used: 3257967956680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)