ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd1l22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ022951.1| Triticum aestivum stress responsive protein mRNA, complete cds Length = 846 Score = 803 bits (405), Expect = 0.0 Identities = 438/449 (97%) Strand = Plus / Plus Query: 19 ccggtgccgtacggcatgtcgcaggtgaacgtcgacggcaactgcggcggtcggccgatg 78 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 83 ccggtgccgtacggcatgtcgcaggtgaacatcgacggcaactgcggcgggcggccgatg 142 Query: 79 ccgccgcagcctacggtgaagatctactgccgcgccaaccccaactacgccatgtccgtg 138 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 ccgccgcagcccacggtgaagatctactgccgcgccaaccccaactacgccatgtccgtg 202 Query: 139 cgcaacggcaaggtggtgctcgcgccggccaaccccaaggacgactaccagcactggatc 198 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 203 cgcaacggcaaggtggtgctggcgccggccaaccccaaggacgactaccagcactggatc 262 Query: 199 aaggacatgaggtggagcaccagcatcaaggacgaggagggctaccccgccttcgccatc 258 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 aaggacatgaggtggagcaccagcatcaaggacgaggagggctaccccgccttcgccatg 322 Query: 259 gtgaacaaggccactggccaggccatcaagcactccctcggccagtcccaccctgtgcgt 318 |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 323 gtgaacaaggccaccgggcaggccatcaagcactccctcggccagtcacaccctgtgcgt 382 Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 383 ctggtgccgtacaacccagactacctggacgagtcggtgctgtggacggagagcagggac 442 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 gtgggcaacgggttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 502 Query: 439 ctcaacggcgacaagtaccacggcggcgt 467 ||||||||||||||||||||||||||||| Sbjct: 503 ctcaacggcgacaagtaccacggcggcgt 531
>ref|XM_479573.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 507 bits (256), Expect = e-141 Identities = 400/448 (89%) Strand = Plus / Plus Query: 24 gccgtacggcatgtcgcaggtgaacgtcgacggcaactgcggcggtcggccgatgccgcc 83 ||||||||| ||||||||||||||| |||| || ||| | | || || || ||||||| Sbjct: 192 gccgtacgggatgtcgcaggtgaacatcgaggggaacgggtgtggcaggacgctgccgcc 251 Query: 84 gcagcctacggtgaagatctactgccgcgccaaccccaactacgccatgtccgtgcgcaa 143 |||||| ||||||||| | |||||||| || ||||| |||||||| ||| | | ||| || Sbjct: 252 gcagccgacggtgaaggtgtactgccgggcgaacccgaactacgcgatgacggcgcggaa 311 Query: 144 cggcaaggtggtgctcgcgccggccaaccccaaggacgactaccagcactggatcaagga 203 |||| ||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 312 cggcgcggtggtgctggcgccggcgaaccccaaggacgagtaccagcattggatcaagga 371 Query: 204 catgaggtggagcaccagcatcaaggacgaggagggctaccccgccttcgccatcgtgaa 263 |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| || Sbjct: 372 catgaggtggagcaccagcatcaaggacgaggagggctaccctgccttcgccctcgtcaa 431 Query: 264 caaggccactggccaggccatcaagcactccctcggccagtcccaccctgtgcgtctggt 323 ||||||||| |||||||||||||||||||||||||||||||| ||||||||| | ||||| Sbjct: 432 caaggccaccggccaggccatcaagcactccctcggccagtcacaccctgtgaggctggt 491 Query: 324 gccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggacgtggg 383 ||||||||||||||| | ||||||||||||||||||||||||||||| | |||||||| Sbjct: 492 gccgtacaacccggaggtgatggacgagtcggtgctgtggacggagagccgcgacgtggg 551 Query: 384 caacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgccctcaa 443 ||||| ||||||||| | |||||||||||||||||||||||||||||||||||| || | Sbjct: 552 gaacgggttcaggtgcatccgcatggtgaacaacatctacctcaacttcgacgccttcca 611 Query: 444 cggcgacaagtaccacggcggcgtccgc 471 |||||||||||||||||||||||||||| Sbjct: 612 cggcgacaagtaccacggcggcgtccgc 639
>dbj|AK072989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145K15, full insert sequence Length = 987 Score = 500 bits (252), Expect = e-138 Identities = 399/448 (89%) Strand = Plus / Plus Query: 24 gccgtacggcatgtcgcaggtgaacgtcgacggcaactgcggcggtcggccgatgccgcc 83 ||||||||| ||||||||||||| | |||| || ||| | | || || || ||||||| Sbjct: 191 gccgtacgggatgtcgcaggtgagcatcgaggggaacgggtgtggcaggacgctgccgcc 250 Query: 84 gcagcctacggtgaagatctactgccgcgccaaccccaactacgccatgtccgtgcgcaa 143 |||||| ||||||||| | |||||||| || ||||| |||||||| ||| | | ||| || Sbjct: 251 gcagccgacggtgaaggtgtactgccgggcgaacccgaactacgcgatgacggcgcggaa 310 Query: 144 cggcaaggtggtgctcgcgccggccaaccccaaggacgactaccagcactggatcaagga 203 |||| ||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 311 cggcgcggtggtgctggcgccggcgaaccccaaggacgagtaccagcattggatcaagga 370 Query: 204 catgaggtggagcaccagcatcaaggacgaggagggctaccccgccttcgccatcgtgaa 263 |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| || Sbjct: 371 catgaggtggagcaccagcatcaaggacgaggagggctaccctgccttcgccctcgtcaa 430 Query: 264 caaggccactggccaggccatcaagcactccctcggccagtcccaccctgtgcgtctggt 323 ||||||||| |||||||||||||||||||||||||||||||| ||||||||| | ||||| Sbjct: 431 caaggccaccggccaggccatcaagcactccctcggccagtcacaccctgtgaggctggt 490 Query: 324 gccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggacgtggg 383 ||||||||||||||| | ||||||||||||||||||||||||||||| | |||||||| Sbjct: 491 gccgtacaacccggaggtgatggacgagtcggtgctgtggacggagagccgcgacgtggg 550 Query: 384 caacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgccctcaa 443 ||||| ||||||||| | |||||||||||||||||||||||||||||||||||| || | Sbjct: 551 gaacgggttcaggtgcatccgcatggtgaacaacatctacctcaacttcgacgccttcca 610 Query: 444 cggcgacaagtaccacggcggcgtccgc 471 |||||||||||||||||||||||||||| Sbjct: 611 cggcgacaagtaccacggcggcgtccgc 638
>gb|BT018086.1| Zea mays clone EL01N0552C09.c mRNA sequence Length = 666 Score = 373 bits (188), Expect = e-100 Identities = 293/328 (89%) Strand = Plus / Plus Query: 143 acggcaaggtggtgctcgcgccggccaaccccaaggacgactaccagcactggatcaagg 202 |||| ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 36 acgggaaggtggtgctggcgccggcgaaccccaaggacgagtaccagcactggatcaagg 95 Query: 203 acatgaggtggagcaccagcatcaaggacgaggagggctaccccgccttcgccatcgtga 262 ||||| |||||||||| ||||||||||||||||| || ||||| || ||||| | |||| Sbjct: 96 acatgcggtggagcacgagcatcaaggacgaggaaggttacccggcgttcgcgctggtga 155 Query: 263 acaaggccactggccaggccatcaagcactccctcggccagtcccaccctgtgcgtctgg 322 ||||||| || || |||||||||||||||| || || ||||||||||| ||||| |||| Sbjct: 156 acaaggcgaccggggaggccatcaagcactcgctggggcagtcccacccggtgcgcctgg 215 Query: 323 tgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggacgtgg 382 |||| |||||||||||||| ||||||||||||||||||||||||||||| | ||||| | Sbjct: 216 tgccctacaacccggactttttggacgagtcggtgctgtggacggagagccgcgacgtcg 275 Query: 383 gcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgccctca 442 ||||||||||| | ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 276 gcaacggcttccgctgcgtccgcatggtcaacaacatctacctcaacttcgacgccctcc 335 Query: 443 acggcgacaagtaccacggcggcgtccg 470 |||||||||||| |||||||||||||| Sbjct: 336 acggcgacaagtggcacggcggcgtccg 363
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 307 bits (155), Expect = 2e-80 Identities = 257/291 (88%) Strand = Plus / Plus Query: 24 gccgtacggcatgtcgcaggtgaacgtcgacggcaactgcggcggtcggccgatgccgcc 83 ||||||||| ||||||||||||||| |||| || ||| | | || || || ||||||| Sbjct: 28955487 gccgtacgggatgtcgcaggtgaacatcgaggggaacgggtgtggcaggacgctgccgcc 28955546 Query: 84 gcagcctacggtgaagatctactgccgcgccaaccccaactacgccatgtccgtgcgcaa 143 |||||| ||||||||| | |||||||| || ||||| |||||||| ||| | | ||| || Sbjct: 28955547 gcagccgacggtgaaggtgtactgccgggcgaacccgaactacgcgatgacggcgcggaa 28955606 Query: 144 cggcaaggtggtgctcgcgccggccaaccccaaggacgactaccagcactggatcaagga 203 |||| ||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 28955607 cggcgcggtggtgctggcgccggcgaaccccaaggacgagtaccagcattggatcaagga 28955666 Query: 204 catgaggtggagcaccagcatcaaggacgaggagggctaccccgccttcgccatcgtgaa 263 |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| || Sbjct: 28955667 catgaggtggagcaccagcatcaaggacgaggagggctaccctgccttcgccctcgtcaa 28955726 Query: 264 caaggccactggccaggccatcaagcactccctcggccagtcccaccctgt 314 ||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 28955727 caaggccaccggccaggccatcaagcactccctcggccagtcacaccctgt 28955777 Score = 208 bits (105), Expect = 1e-50 Identities = 141/153 (92%) Strand = Plus / Plus Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 |||||||||||||||||||| | ||||||||||||||||||||||||||||| | ||| Sbjct: 28955864 ctggtgccgtacaacccggaggtgatggacgagtcggtgctgtggacggagagccgcgac 28955923 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 ||||| ||||| ||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 28955924 gtggggaacgggttcaggtgcatccgcatggtgaacaacatctacctcaacttcgacgcc 28955983 Query: 439 ctcaacggcgacaagtaccacggcggcgtccgc 471 || ||||||||||||||||||||||||||||| Sbjct: 28955984 ttccacggcgacaagtaccacggcggcgtccgc 28956016 Score = 180 bits (91), Expect = 3e-42 Identities = 136/151 (90%) Strand = Plus / Plus Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 |||||||| ||||||||||| | |||||||||||||||||||||||||||||||| |||| Sbjct: 28940682 ctggtgccatacaacccggagtacctggacgagtcggtgctgtggacggagagcaaggac 28940741 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 || ||| | |||||| | ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 28940742 gtcggccatggcttccgctgcgtccgcatggtgaacaacatctacctcaactttgacgcc 28940801 Query: 439 ctcaacggcgacaagtaccacggcggcgtcc 469 || | ||||||||| ||||||||||||||| Sbjct: 28940802 ttccatggcgacaaggaccacggcggcgtcc 28940832 Score = 153 bits (77), Expect = 6e-34 Identities = 131/149 (87%) Strand = Plus / Plus Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 ||||||||||||||||| || | || ||||||||||||||||||||| ||||||| |||| Sbjct: 28939680 ctggtgccgtacaacccagagtaccaggacgagtcggtgctgtggaccgagagcaaggac 28939739 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 || ||| | |||||| | ||| | |||||||| |||||||||||||||||||| |||||| Sbjct: 28939740 gtcggccatggcttccgctgcatccgcatggtcaacaacatctacctcaacttggacgcc 28939799 Query: 439 ctcaacggcgacaagtaccacggcggcgt 467 || |||||||||||| |||||||||||| Sbjct: 28939800 ttccacggcgacaagtcccacggcggcgt 28939828 Score = 141 bits (71), Expect = 2e-30 Identities = 128/147 (87%) Strand = Plus / Plus Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 ||||| || |||||||| || | || ||||||||| ||||||||||||||||||| ||| Sbjct: 28951892 ctggttccctacaacccagagtaccaggacgagtctgtgctgtggacggagagcaaggat 28951951 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 |||||||| |||||| | ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 28951952 gtgggcaagggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgcc 28952011 Query: 439 ctcaacggcgacaagtaccacggcggc 465 || | ||||||||| | ||||||||| Sbjct: 28952012 ttccatggcgacaaggatcacggcggc 28952038 Score = 131 bits (66), Expect = 2e-27 Identities = 129/150 (86%) Strand = Plus / Plus Query: 322 gtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggacgtg 381 ||||||| ||||||||| | | ||||| ||||||||||||||||||||||| |||||| Sbjct: 28951208 gtgccgttcaacccggagtacgaggacgcgtcggtgctgtggacggagagcaaggacgtc 28951267 Query: 382 ggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgccctc 441 ||||| |||||| | ||| | |||||||| ||||||| | ||||||||| |||||| || Sbjct: 28951268 ggcaagggcttccgctgcatccgcatggtcaacaacacccgcctcaacttggacgccttc 28951327 Query: 442 aacggcgacaagtaccacggcggcgtccgc 471 ||||||||||| ||||||||||||||||| Sbjct: 28951328 cacggcgacaaggaccacggcggcgtccgc 28951357 Score = 103 bits (52), Expect = 5e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 187 cagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacccc 246 ||||||||| | |||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 28940335 cagcactgggtgaaggacatgaggcacagcacgagcatcaaggacgaggaaggctacccg 28940394 Query: 247 gccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagtcc 306 || ||||| | |||||||||||||| || | |||||||||||||||||||| ||| | Sbjct: 28940395 gcgttcgcgctggtgaacaaggccaccggggaagccatcaagcactccctcggacagagc 28940454 Query: 307 caccctgt 314 |||||||| Sbjct: 28940455 caccctgt 28940462 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 187 cagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacccc 246 ||||||||| ||||||||||||||| ||||||| | ||||||| ||||||| || Sbjct: 28950966 cagcactggttcaaggacatgaggttcagcaccaaggtgaaggacggggagggcatgccg 28951025 Query: 247 gccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagtcc 306 || |||||| |||| ||||||||||| || | ||| ||||||||||||||||||||||| Sbjct: 28951026 gcgttcgccctcgtcaacaaggccaccggactcgccgtcaagcactccctcggccagtcc 28951085 Query: 307 caccc 311 ||||| Sbjct: 28951086 caccc 28951090 Score = 69.9 bits (35), Expect = 7e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 188 agcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctaccccg 247 ||||||||||||||||||||||| |||| || |||| ||||||||| |||||||| | Sbjct: 28951671 agcactggatcaaggacatgaggcacagcaacaagatcagggacgaggaaggctacccgg 28951730 Query: 248 ccttcgccatcgtgaacaaggccactggccaggccatcaagcactcc 294 | ||||| | || ||||||| ||| ||| | ||||||||||||||| Sbjct: 28951731 cgttcgcgctggtcaacaaggtcaccggcgaagccatcaagcactcc 28951777 Score = 44.1 bits (22), Expect = 0.41 Identities = 70/86 (81%) Strand = Plus / Plus Query: 226 aaggacgaggagggctaccccgccttcgccatcgtgaacaaggccactggccaggccatc 285 ||||||||||||||| |||| || ||||| |||| || ||||| |||| ||| || Sbjct: 28939488 aaggacgaggagggccacccggcgttcgcgctcgtcaatcgcgccaccggcctcgccgtc 28939547 Query: 286 aagcactccctcggccagtcccaccc 311 |||||||| |||||||| |||||||| Sbjct: 28939548 aagcactcgctcggccaatcccaccc 28939573
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 307 bits (155), Expect = 2e-80 Identities = 257/291 (88%) Strand = Plus / Plus Query: 24 gccgtacggcatgtcgcaggtgaacgtcgacggcaactgcggcggtcggccgatgccgcc 83 ||||||||| ||||||||||||||| |||| || ||| | | || || || ||||||| Sbjct: 73024 gccgtacgggatgtcgcaggtgaacatcgaggggaacgggtgtggcaggacgctgccgcc 73083 Query: 84 gcagcctacggtgaagatctactgccgcgccaaccccaactacgccatgtccgtgcgcaa 143 |||||| ||||||||| | |||||||| || ||||| |||||||| ||| | | ||| || Sbjct: 73084 gcagccgacggtgaaggtgtactgccgggcgaacccgaactacgcgatgacggcgcggaa 73143 Query: 144 cggcaaggtggtgctcgcgccggccaaccccaaggacgactaccagcactggatcaagga 203 |||| ||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 73144 cggcgcggtggtgctggcgccggcgaaccccaaggacgagtaccagcattggatcaagga 73203 Query: 204 catgaggtggagcaccagcatcaaggacgaggagggctaccccgccttcgccatcgtgaa 263 |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| || Sbjct: 73204 catgaggtggagcaccagcatcaaggacgaggagggctaccctgccttcgccctcgtcaa 73263 Query: 264 caaggccactggccaggccatcaagcactccctcggccagtcccaccctgt 314 ||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 73264 caaggccaccggccaggccatcaagcactccctcggccagtcacaccctgt 73314 Score = 208 bits (105), Expect = 1e-50 Identities = 141/153 (92%) Strand = Plus / Plus Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 |||||||||||||||||||| | ||||||||||||||||||||||||||||| | ||| Sbjct: 73401 ctggtgccgtacaacccggaggtgatggacgagtcggtgctgtggacggagagccgcgac 73460 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 ||||| ||||| ||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 73461 gtggggaacgggttcaggtgcatccgcatggtgaacaacatctacctcaacttcgacgcc 73520 Query: 439 ctcaacggcgacaagtaccacggcggcgtccgc 471 || ||||||||||||||||||||||||||||| Sbjct: 73521 ttccacggcgacaagtaccacggcggcgtccgc 73553 Score = 180 bits (91), Expect = 3e-42 Identities = 136/151 (90%) Strand = Plus / Plus Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 |||||||| ||||||||||| | |||||||||||||||||||||||||||||||| |||| Sbjct: 58219 ctggtgccatacaacccggagtacctggacgagtcggtgctgtggacggagagcaaggac 58278 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 || ||| | |||||| | ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 58279 gtcggccatggcttccgctgcgtccgcatggtgaacaacatctacctcaactttgacgcc 58338 Query: 439 ctcaacggcgacaagtaccacggcggcgtcc 469 || | ||||||||| ||||||||||||||| Sbjct: 58339 ttccatggcgacaaggaccacggcggcgtcc 58369 Score = 153 bits (77), Expect = 6e-34 Identities = 131/149 (87%) Strand = Plus / Plus Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 ||||||||||||||||| || | || ||||||||||||||||||||| ||||||| |||| Sbjct: 57217 ctggtgccgtacaacccagagtaccaggacgagtcggtgctgtggaccgagagcaaggac 57276 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 || ||| | |||||| | ||| | |||||||| |||||||||||||||||||| |||||| Sbjct: 57277 gtcggccatggcttccgctgcatccgcatggtcaacaacatctacctcaacttggacgcc 57336 Query: 439 ctcaacggcgacaagtaccacggcggcgt 467 || |||||||||||| |||||||||||| Sbjct: 57337 ttccacggcgacaagtcccacggcggcgt 57365 Score = 141 bits (71), Expect = 2e-30 Identities = 128/147 (87%) Strand = Plus / Plus Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 ||||| || |||||||| || | || ||||||||| ||||||||||||||||||| ||| Sbjct: 69429 ctggttccctacaacccagagtaccaggacgagtctgtgctgtggacggagagcaaggat 69488 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 |||||||| |||||| | ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 69489 gtgggcaagggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgcc 69548 Query: 439 ctcaacggcgacaagtaccacggcggc 465 || | ||||||||| | ||||||||| Sbjct: 69549 ttccatggcgacaaggatcacggcggc 69575 Score = 131 bits (66), Expect = 2e-27 Identities = 129/150 (86%) Strand = Plus / Plus Query: 322 gtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggacgtg 381 ||||||| ||||||||| | | ||||| ||||||||||||||||||||||| |||||| Sbjct: 68745 gtgccgttcaacccggagtacgaggacgcgtcggtgctgtggacggagagcaaggacgtc 68804 Query: 382 ggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgccctc 441 ||||| |||||| | ||| | |||||||| ||||||| | ||||||||| |||||| || Sbjct: 68805 ggcaagggcttccgctgcatccgcatggtcaacaacacccgcctcaacttggacgccttc 68864 Query: 442 aacggcgacaagtaccacggcggcgtccgc 471 ||||||||||| ||||||||||||||||| Sbjct: 68865 cacggcgacaaggaccacggcggcgtccgc 68894 Score = 103 bits (52), Expect = 5e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 187 cagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacccc 246 ||||||||| | |||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 57872 cagcactgggtgaaggacatgaggcacagcacgagcatcaaggacgaggaaggctacccg 57931 Query: 247 gccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagtcc 306 || ||||| | |||||||||||||| || | |||||||||||||||||||| ||| | Sbjct: 57932 gcgttcgcgctggtgaacaaggccaccggggaagccatcaagcactccctcggacagagc 57991 Query: 307 caccctgt 314 |||||||| Sbjct: 57992 caccctgt 57999 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 187 cagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacccc 246 ||||||||| ||||||||||||||| ||||||| | ||||||| ||||||| || Sbjct: 68503 cagcactggttcaaggacatgaggttcagcaccaaggtgaaggacggggagggcatgccg 68562 Query: 247 gccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagtcc 306 || |||||| |||| ||||||||||| || | ||| ||||||||||||||||||||||| Sbjct: 68563 gcgttcgccctcgtcaacaaggccaccggactcgccgtcaagcactccctcggccagtcc 68622 Query: 307 caccc 311 ||||| Sbjct: 68623 caccc 68627 Score = 69.9 bits (35), Expect = 7e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 188 agcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctaccccg 247 ||||||||||||||||||||||| |||| || |||| ||||||||| |||||||| | Sbjct: 69208 agcactggatcaaggacatgaggcacagcaacaagatcagggacgaggaaggctacccgg 69267 Query: 248 ccttcgccatcgtgaacaaggccactggccaggccatcaagcactcc 294 | ||||| | || ||||||| ||| ||| | ||||||||||||||| Sbjct: 69268 cgttcgcgctggtcaacaaggtcaccggcgaagccatcaagcactcc 69314 Score = 44.1 bits (22), Expect = 0.41 Identities = 70/86 (81%) Strand = Plus / Plus Query: 226 aaggacgaggagggctaccccgccttcgccatcgtgaacaaggccactggccaggccatc 285 ||||||||||||||| |||| || ||||| |||| || ||||| |||| ||| || Sbjct: 57025 aaggacgaggagggccacccggcgttcgcgctcgtcaatcgcgccaccggcctcgccgtc 57084 Query: 286 aagcactccctcggccagtcccaccc 311 |||||||| |||||||| |||||||| Sbjct: 57085 aagcactcgctcggccaatcccaccc 57110
>emb|Y08988.1|OSR40G3 O.sativa osr40g3 gene Length = 1531 Score = 307 bits (155), Expect = 2e-80 Identities = 257/291 (88%) Strand = Plus / Plus Query: 24 gccgtacggcatgtcgcaggtgaacgtcgacggcaactgcggcggtcggccgatgccgcc 83 ||||||||| ||||||||||||||| |||| || ||| | | || || || ||||||| Sbjct: 727 gccgtacgggatgtcgcaggtgaacatcgaggggaacgggtgtggcaggacgctgccgcc 786 Query: 84 gcagcctacggtgaagatctactgccgcgccaaccccaactacgccatgtccgtgcgcaa 143 |||||| ||||||||| | |||||||| || ||||| |||||||| ||| | | ||| || Sbjct: 787 gcagccgacggtgaaggtgtactgccgggcgaacccgaactacgcgatgacggcgcggaa 846 Query: 144 cggcaaggtggtgctcgcgccggccaaccccaaggacgactaccagcactggatcaagga 203 |||| ||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 847 cggcgcggtggtgctggcgccggcgaaccccaaggacgagtaccagcattggatcaagga 906 Query: 204 catgaggtggagcaccagcatcaaggacgaggagggctaccccgccttcgccatcgtgaa 263 |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| || Sbjct: 907 catgaggtggagcaccagcatcaaggacgaggagggctaccctgccttcgccctcgtcaa 966 Query: 264 caaggccactggccaggccatcaagcactccctcggccagtcccaccctgt 314 ||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 967 caaggccaccggccaggccatcaagcactccctcggccagtcacaccctgt 1017 Score = 208 bits (105), Expect = 1e-50 Identities = 141/153 (92%) Strand = Plus / Plus Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 |||||||||||||||||||| | ||||||||||||||||||||||||||||| | ||| Sbjct: 1104 ctggtgccgtacaacccggaggtgatggacgagtcggtgctgtggacggagagccgcgac 1163 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 ||||| ||||| ||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 1164 gtggggaacgggttcaggtgcatccgcatggtgaacaacatctacctcaacttcgacgcc 1223 Query: 439 ctcaacggcgacaagtaccacggcggcgtccgc 471 || ||||||||||||||||||||||||||||| Sbjct: 1224 ttccacggcgacaagtaccacggcggcgtccgc 1256
>ref|NM_187532.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1122 Score = 289 bits (146), Expect = 4e-75 Identities = 257/294 (87%) Strand = Plus / Plus Query: 178 gacgactaccagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggag 237 ||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct: 682 gacgagtaccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaa 741 Query: 238 ggctaccccgccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctc 297 |||||||||||||||||| |||| |||| || ||| ||| |||||||||||||||||| Sbjct: 742 ggctaccccgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactcccaa 801 Query: 298 ggccagtcccaccctgtgcgtctggtgccgtacaacccggacttcctggacgagtcggtg 357 ||| | |||||||||| ||||||||||||||||| | | || ||||||||||||| Sbjct: 802 ggcgaaggccaccctgtgaagctggtgccgtacaaccccggataccaggacgagtcggtg 861 Query: 358 ctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgcgcatggtgaacaac 417 ||||||||||||||| | ||||| || |||||||| | ||| | ||||||||||||||| Sbjct: 862 ctgtggacggagagccgcgacgtcgggcacggcttccgctgcatccgcatggtgaacaac 921 Query: 418 atctacctcaacttcgacgccctcaacggcgacaagtaccacggcggcgtccgc 471 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 922 atctacctcaacttcgacgccctccacggcgacaaggaccacggcggcgtccgc 975 Score = 212 bits (107), Expect = 8e-52 Identities = 239/283 (84%) Strand = Plus / Plus Query: 185 accagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacc 244 ||||||||||| |||||||||| | | ||| ||| |||||||||||||||||| ||| Sbjct: 182 accagcactggtacaaggacatgcgcttcagcgccaagatcaaggacgaggagggcaacc 241 Query: 245 ccgccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagt 304 | || ||||| |||| ||||||||||| |||| |||||||||||||||||||||||| Sbjct: 242 cggcgttcgcgctcgtcaacaaggccaccggcctcgccatcaagcactccctcggccagg 301 Query: 305 cccaccctgtgcgtctggtgccgtacaacccggacttcctggacgagtcggtgctgtgga 364 |||||| ||| |||| ||||| ||||||||| | || |||||||||||||||||||| Sbjct: 302 gccacccggtgaagctggcgccgttcaacccggagtacccggacgagtcggtgctgtgga 361 Query: 365 cggagagcagggacgtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacc 424 |||||||| | ||||||||||| ||||| | ||| | |||||| ||||||||||| || Sbjct: 362 cggagagcggcgacgtgggcaagagcttccgctgcatccgcatgctgaacaacatccgcc 421 Query: 425 tcaacttcgacgccctcaacggcgacaagtaccacggcggcgt 467 ||||||||||||| || ||||||||||| ||||||||||||| Sbjct: 422 tcaacttcgacgcgttccacggcgacaaggaccacggcggcgt 464
>dbj|AK069815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031K10, full insert sequence Length = 1765 Score = 289 bits (146), Expect = 4e-75 Identities = 257/294 (87%) Strand = Plus / Plus Query: 178 gacgactaccagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggag 237 ||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct: 757 gacgagtaccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaa 816 Query: 238 ggctaccccgccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctc 297 |||||||||||||||||| |||| |||| || ||| ||| |||||||||||||||||| Sbjct: 817 ggctaccccgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactcccaa 876 Query: 298 ggccagtcccaccctgtgcgtctggtgccgtacaacccggacttcctggacgagtcggtg 357 ||| | |||||||||| ||||||||||||||||| | | || ||||||||||||| Sbjct: 877 ggcgaaggccaccctgtgaagctggtgccgtacaaccccggataccaggacgagtcggtg 936 Query: 358 ctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgcgcatggtgaacaac 417 ||||||||||||||| | ||||| || |||||||| | ||| | ||||||||||||||| Sbjct: 937 ctgtggacggagagccgcgacgtcgggcacggcttccgctgcatccgcatggtgaacaac 996 Query: 418 atctacctcaacttcgacgccctcaacggcgacaagtaccacggcggcgtccgc 471 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 997 atctacctcaacttcgacgccctccacggcgacaaggaccacggcggcgtccgc 1050 Score = 212 bits (107), Expect = 8e-52 Identities = 239/283 (84%) Strand = Plus / Plus Query: 185 accagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacc 244 ||||||||||| |||||||||| | | ||| ||| |||||||||||||||||| ||| Sbjct: 257 accagcactggtacaaggacatgcgcttcagcgccaagatcaaggacgaggagggcaacc 316 Query: 245 ccgccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagt 304 | || ||||| |||| ||||||||||| |||| |||||||||||||||||||||||| Sbjct: 317 cggcgttcgcgctcgtcaacaaggccaccggcctcgccatcaagcactccctcggccagg 376 Query: 305 cccaccctgtgcgtctggtgccgtacaacccggacttcctggacgagtcggtgctgtgga 364 |||||| ||| |||| ||||| ||||||||| | || |||||||||||||||||||| Sbjct: 377 gccacccggtgaagctggcgccgttcaacccggagtacccggacgagtcggtgctgtgga 436 Query: 365 cggagagcagggacgtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacc 424 |||||||| | ||||||||||| ||||| | ||| | |||||| ||||||||||| || Sbjct: 437 cggagagcggcgacgtgggcaagagcttccgctgcatccgcatgctgaacaacatccgcc 496 Query: 425 tcaacttcgacgccctcaacggcgacaagtaccacggcggcgt 467 ||||||||||||| || ||||||||||| ||||||||||||| Sbjct: 497 tcaacttcgacgcgttccacggcgacaaggaccacggcggcgt 539
>emb|X95402.1|OSOSR40C1 O.sativa mRNA for novel protein, osr40c1 Length = 1458 Score = 281 bits (142), Expect = 1e-72 Identities = 256/294 (87%) Strand = Plus / Plus Query: 178 gacgactaccagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggag 237 ||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct: 744 gacgagtaccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaa 803 Query: 238 ggctaccccgccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctc 297 || ||||||||||||||| |||| |||| || ||| ||| |||||||||||||||||| Sbjct: 804 gggtaccccgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactcccaa 863 Query: 298 ggccagtcccaccctgtgcgtctggtgccgtacaacccggacttcctggacgagtcggtg 357 ||| | |||||||||| ||||||||||||||||| | | || ||||||||||||| Sbjct: 864 ggcgaaggccaccctgtgaagctggtgccgtacaaccccggataccaggacgagtcggtg 923 Query: 358 ctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgcgcatggtgaacaac 417 ||||||||||||||| | ||||| || |||||||| | ||| | ||||||||||||||| Sbjct: 924 ctgtggacggagagccgcgacgtcgggcacggcttccgctgcatccgcatggtgaacaac 983 Query: 418 atctacctcaacttcgacgccctcaacggcgacaagtaccacggcggcgtccgc 471 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 984 atctacctcaacttcgacgccctccacggcgacaaggaccacggcggcgtccgc 1037 Score = 212 bits (107), Expect = 8e-52 Identities = 239/283 (84%) Strand = Plus / Plus Query: 185 accagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacc 244 ||||||||||| |||||||||| | | ||| ||| |||||||||||||||||| ||| Sbjct: 244 accagcactggtacaaggacatgcgcttcagcgccaagatcaaggacgaggagggcaacc 303 Query: 245 ccgccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagt 304 | || ||||| |||| ||||||||||| |||| |||||||||||||||||||||||| Sbjct: 304 cggcgttcgcgctcgtcaacaaggccaccggcctcgccatcaagcactccctcggccagg 363 Query: 305 cccaccctgtgcgtctggtgccgtacaacccggacttcctggacgagtcggtgctgtgga 364 |||||| ||| |||| ||||| ||||||||| | || |||||||||||||||||||| Sbjct: 364 gccacccggtgaagctggcgccgttcaacccggagtacccggacgagtcggtgctgtgga 423 Query: 365 cggagagcagggacgtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacc 424 |||||||| | ||||||||||| ||||| | ||| | |||||| ||||||||||| || Sbjct: 424 cggagagcggcgacgtgggcaagagcttccgctgcattcgcatgctgaacaacatccgcc 483 Query: 425 tcaacttcgacgccctcaacggcgacaagtaccacggcggcgt 467 ||||||||||||| || ||||||||||| ||||||||||||| Sbjct: 484 tcaacttcgacgcgttccacggcgacaaggaccacggcggcgt 526
>ref|XM_479570.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1209 Score = 246 bits (124), Expect = 6e-62 Identities = 246/286 (86%), Gaps = 3/286 (1%) Strand = Plus / Plus Query: 187 cagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacccc 246 ||||||||| | |||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 844 cagcactgggtgaaggacatgaggcacagcacgagcatcaaggacgaggaaggctacccg 903 Query: 247 gccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagtcc 306 || ||||| | |||||||||||||| || | |||||||||||||||||||| ||| | Sbjct: 904 gcgttcgcgctggtgaacaaggccaccggggaagccatcaagcactccctcggacagagc 963 Query: 307 caccctgtgcgt---ctggtgccgtacaacccggacttcctggacgagtcggtgctgtgg 363 |||||||| | |||||||| ||||||||||| | |||||||||||||||||||||| Sbjct: 964 caccctgtagttaggctggtgccatacaacccggagtacctggacgagtcggtgctgtgg 1023 Query: 364 acggagagcagggacgtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctac 423 |||||||||| |||||| ||| | |||||| | ||||| ||||||||||||||||||||| Sbjct: 1024 acggagagcaaggacgtcggccatggcttccgctgcgtccgcatggtgaacaacatctac 1083 Query: 424 ctcaacttcgacgccctcaacggcgacaagtaccacggcggcgtcc 469 |||||||| |||||| || | ||||||||| ||||||||||||||| Sbjct: 1084 ctcaactttgacgccttccatggcgacaaggaccacggcggcgtcc 1129 Score = 170 bits (86), Expect = 3e-39 Identities = 204/242 (84%), Gaps = 1/242 (0%) Strand = Plus / Plus Query: 226 aaggacgaggagggctaccccgccttcgccatcgtgaacaaggccactggccaggccatc 285 ||||||||||||||| |||| || ||||| |||| || ||||| |||| ||| || Sbjct: 199 aaggacgaggagggccacccggcgttcgcgctcgtcaatcgcgccaccggcctcgccgtc 258 Query: 286 aagcactccctcggccagtcccaccctgtgcgtctggtgccgtacaacccggacttcctg 345 |||||||| |||||||| |||||||| || | ||||||||||||||||| || | || | Sbjct: 259 aagcactcgctcggccaatcccaccccgtaag-ctggtgccgtacaacccagagtaccag 317 Query: 346 gacgagtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgcgc 405 |||||||||||||||||||| ||||||| |||||| ||| | |||||| | ||| | ||| Sbjct: 318 gacgagtcggtgctgtggaccgagagcaaggacgtcggccatggcttccgctgcatccgc 377 Query: 406 atggtgaacaacatctacctcaacttcgacgccctcaacggcgacaagtaccacggcggc 465 ||||| |||||||||||||||||||| |||||| || |||||||||||| |||||||||| Sbjct: 378 atggtcaacaacatctacctcaacttggacgccttccacggcgacaagtcccacggcggc 437 Query: 466 gt 467 || Sbjct: 438 gt 439
>gb|BT016654.1| Zea mays clone Contig487 mRNA sequence Length = 905 Score = 226 bits (114), Expect = 5e-56 Identities = 246/290 (84%) Strand = Plus / Plus Query: 178 gacgactaccagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggag 237 ||||| |||||||||||||||||||||||| | |||| |||| ||||||||||||| Sbjct: 194 gacgagtaccagcactggatcaaggacatgcgccacagcaacagcgtcaaggacgaggaa 253 Query: 238 ggctaccccgccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctc 297 || ||||| |||||||| |||| |||| || ||| ||| |||||||||||||||||| Sbjct: 254 gggtacccggccttcgcgctcgtcaacagggtcaccggcgaggccatcaagcactcccag 313 Query: 298 ggccagtcccaccctgtgcgtctggtgccgtacaacccggacttcctggacgagtcggtg 357 ||| || |||||| || |||||||| |||||||| | || || ||||||||||||| Sbjct: 314 ggcgagggccacccggtcaagctggtgccctacaaccccggctaccaggacgagtcggtg 373 Query: 358 ctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgcgcatggtgaacaac 417 ||||||||||||||| | ||||| ||| |||||||| | ||||| |||||||| |||||| Sbjct: 374 ctgtggacggagagccgcgacgtcggccacggcttccgctgcgtccgcatggtcaacaac 433 Query: 418 atctacctcaacttcgacgccctcaacggcgacaagtaccacggcggcgt 467 ||||||||||||||||||||| || ||||||||||| ||||||||||||| Sbjct: 434 atctacctcaacttcgacgccttccacggcgacaaggaccacggcggcgt 483
>ref|XM_479571.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1511 Score = 222 bits (112), Expect = 8e-55 Identities = 256/304 (84%) Strand = Plus / Plus Query: 168 caaccccaaggacgactaccagcactggatcaaggacatgaggtggagcaccagcatcaa 227 ||||||||||||||| ||||||||||| ||||||||||||||| ||||||| | || Sbjct: 218 caaccccaaggacgagcaccagcactggttcaaggacatgaggttcagcaccaaggtgaa 277 Query: 228 ggacgaggagggctaccccgccttcgccatcgtgaacaaggccactggccaggccatcaa 287 ||||| ||||||| || || |||||| |||| ||||||||||| || | ||| |||| Sbjct: 278 ggacggggagggcatgccggcgttcgccctcgtcaacaaggccaccggactcgccgtcaa 337 Query: 288 gcactccctcggccagtcccaccctgtgcgtctggtgccgtacaacccggacttcctgga 347 |||||||||||||||||||||||| ||| || ||||||| ||||||||| | | ||| Sbjct: 338 gcactccctcggccagtcccaccccgtgaagcttgtgccgttcaacccggagtacgagga 397 Query: 348 cgagtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgcgcat 407 || ||||||||||||||||||||||| |||||| ||||| |||||| | ||| | ||||| Sbjct: 398 cgcgtcggtgctgtggacggagagcaaggacgtcggcaagggcttccgctgcatccgcat 457 Query: 408 ggtgaacaacatctacctcaacttcgacgccctcaacggcgacaagtaccacggcggcgt 467 ||| ||||||| | ||||||||| |||||| || ||||||||||| ||||||||||||| Sbjct: 458 ggtcaacaacacccgcctcaacttggacgccttccacggcgacaaggaccacggcggcgt 517 Query: 468 ccgc 471 |||| Sbjct: 518 ccgc 521 Score = 216 bits (109), Expect = 5e-53 Identities = 250/297 (84%) Strand = Plus / Plus Query: 169 aaccccaaggacgactaccagcactggatcaaggacatgaggtggagcaccagcatcaag 228 ||||||| |||||||||||||||||||||||||||||||||| |||| || |||| | Sbjct: 738 aaccccagggacgactaccagcactggatcaaggacatgaggcacagcaacaagatcagg 797 Query: 229 gacgaggagggctaccccgccttcgccatcgtgaacaaggccactggccaggccatcaag 288 |||||||| |||||||| || ||||| | || ||||||| ||| ||| | ||||||||| Sbjct: 798 gacgaggaaggctacccggcgttcgcgctggtcaacaaggtcaccggcgaagccatcaag 857 Query: 289 cactccctcggccagtcccaccctgtgcgtctggtgccgtacaacccggacttcctggac 348 |||||| ||| ||| |||||| ||| ||||| || |||||||| || | || |||| Sbjct: 858 cactccaccggacagggccacccggtgaagctggttccctacaacccagagtaccaggac 917 Query: 349 gagtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgcgcatg 408 ||||| ||||||||||||||||||| ||| |||||||| |||||| | ||| | |||||| Sbjct: 918 gagtctgtgctgtggacggagagcaaggatgtgggcaagggcttccgctgcatccgcatg 977 Query: 409 gtgaacaacatctacctcaacttcgacgccctcaacggcgacaagtaccacggcggc 465 |||||||||||||||||||||||||||||| || | ||||||||| | ||||||||| Sbjct: 978 gtgaacaacatctacctcaacttcgacgccttccatggcgacaaggatcacggcggc 1034
>dbj|AK103324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K07, full insert sequence Length = 1512 Score = 222 bits (112), Expect = 8e-55 Identities = 256/304 (84%) Strand = Plus / Plus Query: 168 caaccccaaggacgactaccagcactggatcaaggacatgaggtggagcaccagcatcaa 227 ||||||||||||||| ||||||||||| ||||||||||||||| ||||||| | || Sbjct: 218 caaccccaaggacgagcaccagcactggttcaaggacatgaggttcagcaccaaggtgaa 277 Query: 228 ggacgaggagggctaccccgccttcgccatcgtgaacaaggccactggccaggccatcaa 287 ||||| ||||||| || || |||||| |||| ||||||||||| || | ||| |||| Sbjct: 278 ggacggggagggcatgccggcgttcgccctcgtcaacaaggccaccggactcgccgtcaa 337 Query: 288 gcactccctcggccagtcccaccctgtgcgtctggtgccgtacaacccggacttcctgga 347 |||||||||||||||||||||||| ||| || ||||||| ||||||||| | | ||| Sbjct: 338 gcactccctcggccagtcccaccccgtgaagcttgtgccgttcaacccggagtacgagga 397 Query: 348 cgagtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgcgcat 407 || ||||||||||||||||||||||| |||||| ||||| |||||| | ||| | ||||| Sbjct: 398 cgcgtcggtgctgtggacggagagcaaggacgtcggcaagggcttccgctgcatccgcat 457 Query: 408 ggtgaacaacatctacctcaacttcgacgccctcaacggcgacaagtaccacggcggcgt 467 ||| ||||||| | ||||||||| |||||| || ||||||||||| ||||||||||||| Sbjct: 458 ggtcaacaacacccgcctcaacttggacgccttccacggcgacaaggaccacggcggcgt 517 Query: 468 ccgc 471 |||| Sbjct: 518 ccgc 521 Score = 216 bits (109), Expect = 5e-53 Identities = 250/297 (84%) Strand = Plus / Plus Query: 169 aaccccaaggacgactaccagcactggatcaaggacatgaggtggagcaccagcatcaag 228 ||||||| |||||||||||||||||||||||||||||||||| |||| || |||| | Sbjct: 738 aaccccagggacgactaccagcactggatcaaggacatgaggcacagcaacaagatcagg 797 Query: 229 gacgaggagggctaccccgccttcgccatcgtgaacaaggccactggccaggccatcaag 288 |||||||| |||||||| || ||||| | || ||||||| ||| ||| | ||||||||| Sbjct: 798 gacgaggaaggctacccggcgttcgcgctggtcaacaaggtcaccggcgaagccatcaag 857 Query: 289 cactccctcggccagtcccaccctgtgcgtctggtgccgtacaacccggacttcctggac 348 |||||| ||| ||| |||||| ||| ||||| || |||||||| || | || |||| Sbjct: 858 cactccaccggacagggccacccggtgaagctggttccctacaacccagagtaccaggac 917 Query: 349 gagtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgcgcatg 408 ||||| ||||||||||||||||||| ||| |||||||| |||||| | ||| | |||||| Sbjct: 918 gagtctgtgctgtggacggagagcaaggatgtgggcaagggcttccgctgcatccgcatg 977 Query: 409 gtgaacaacatctacctcaacttcgacgccctcaacggcgacaagtaccacggcggc 465 |||||||||||||||||||||||||||||| || | ||||||||| | ||||||||| Sbjct: 978 gtgaacaacatctacctcaacttcgacgccttccatggcgacaaggatcacggcggc 1034
>ref|XM_479572.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1239 Score = 216 bits (109), Expect = 5e-53 Identities = 250/297 (84%) Strand = Plus / Plus Query: 169 aaccccaaggacgactaccagcactggatcaaggacatgaggtggagcaccagcatcaag 228 ||||||| |||||||||||||||||||||||||||||||||| |||| || |||| | Sbjct: 523 aaccccagggacgactaccagcactggatcaaggacatgaggcacagcaacaagatcagg 582 Query: 229 gacgaggagggctaccccgccttcgccatcgtgaacaaggccactggccaggccatcaag 288 |||||||| |||||||| || ||||| | || ||||||| ||| ||| | ||||||||| Sbjct: 583 gacgaggaaggctacccggcgttcgcgctggtcaacaaggtcaccggcgaagccatcaag 642 Query: 289 cactccctcggccagtcccaccctgtgcgtctggtgccgtacaacccggacttcctggac 348 |||||| ||| ||| |||||| ||| ||||| || |||||||| || | || |||| Sbjct: 643 cactccaccggacagggccacccggtgaagctggttccctacaacccagagtaccaggac 702 Query: 349 gagtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgcgcatg 408 ||||| ||||||||||||||||||| ||| |||||||| |||||| | ||| | |||||| Sbjct: 703 gagtctgtgctgtggacggagagcaaggatgtgggcaagggcttccgctgcatccgcatg 762 Query: 409 gtgaacaacatctacctcaacttcgacgccctcaacggcgacaagtaccacggcggc 465 |||||||||||||||||||||||||||||| || | ||||||||| | ||||||||| Sbjct: 763 gtgaacaacatctacctcaacttcgacgccttccatggcgacaaggatcacggcggc 819 Score = 200 bits (101), Expect = 3e-48 Identities = 239/285 (83%) Strand = Plus / Plus Query: 187 cagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacccc 246 ||||||||| ||||||||||||||| ||||||| | ||||||| ||||||| || Sbjct: 22 cagcactggttcaaggacatgaggttcagcaccaaggtgaaggacggggagggcatgccg 81 Query: 247 gccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagtcc 306 || |||||| |||| ||||||||||| || | ||| ||||||||||||||||||||||| Sbjct: 82 gcgttcgccctcgtcaacaaggccaccggactcgccgtcaagcactccctcggccagtcc 141 Query: 307 caccctgtgcgtctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacg 366 ||||| ||| || ||||||| ||||||||| | | ||||| |||||||||||||||| Sbjct: 142 caccccgtgaagcttgtgccgttcaacccggagtacgaggacgcgtcggtgctgtggacg 201 Query: 367 gagagcagggacgtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctc 426 ||||||| |||||| ||||| |||||| | ||| | |||||||| ||||||| | |||| Sbjct: 202 gagagcaaggacgtcggcaagggcttccgctgcatccgcatggtcaacaacacccgcctc 261 Query: 427 aacttcgacgccctcaacggcgacaagtaccacggcggcgtccgc 471 ||||| |||||| || ||||||||||| ||||||||||||||||| Sbjct: 262 aacttggacgccttccacggcgacaaggaccacggcggcgtccgc 306
>dbj|AK060899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D04, full insert sequence Length = 1239 Score = 212 bits (107), Expect = 8e-52 Identities = 248/295 (84%) Strand = Plus / Plus Query: 171 ccccaaggacgactaccagcactggatcaaggacatgaggtggagcaccagcatcaagga 230 ||||| |||||||||||||||||||||||||||||||||| |||| || |||| ||| Sbjct: 525 ccccagggacgactaccagcactggatcaaggacatgaggcacagcaacaagatcaggga 584 Query: 231 cgaggagggctaccccgccttcgccatcgtgaacaaggccactggccaggccatcaagca 290 |||||| |||||||| || ||||| | || ||||||| ||| ||| | ||||||||||| Sbjct: 585 cgaggaaggctacccggcgttcgcgctggtcaacaaggtcaccggcgaagccatcaagca 644 Query: 291 ctccctcggccagtcccaccctgtgcgtctggtgccgtacaacccggacttcctggacga 350 |||| ||| ||| |||||| ||| ||||| || |||||||| || | || |||||| Sbjct: 645 ctccaccggacagggccacccggtgaagctggttccctacaacccagagtaccaggacga 704 Query: 351 gtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgcgcatggt 410 ||| ||||||||||||||||||| ||| |||||||| |||||| | ||| | |||||||| Sbjct: 705 gtctgtgctgtggacggagagcaaggatgtgggcaagggcttccgctgcatccgcatggt 764 Query: 411 gaacaacatctacctcaacttcgacgccctcaacggcgacaagtaccacggcggc 465 |||||||||||||||||||||||||||| || | ||||||||| | ||||||||| Sbjct: 765 gaacaacatctacctcaacttcgacgccttccatggcgacaaggatcacggcggc 819 Score = 200 bits (101), Expect = 3e-48 Identities = 239/285 (83%) Strand = Plus / Plus Query: 187 cagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacccc 246 ||||||||| ||||||||||||||| ||||||| | ||||||| ||||||| || Sbjct: 22 cagcactggttcaaggacatgaggttcagcaccaaggtgaaggacggggagggcatgccg 81 Query: 247 gccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagtcc 306 || |||||| |||| ||||||||||| || | ||| ||||||||||||||||||||||| Sbjct: 82 gcgttcgccctcgtcaacaaggccaccggactcgccgtcaagcactccctcggccagtcc 141 Query: 307 caccctgtgcgtctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacg 366 ||||| ||| || ||||||| ||||||||| | | ||||| |||||||||||||||| Sbjct: 142 caccccgtgaagcttgtgccgttcaacccggagtacgaggacgcgtcggtgctgtggacg 201 Query: 367 gagagcagggacgtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctc 426 ||||||| |||||| ||||| |||||| | ||| | |||||||| ||||||| | |||| Sbjct: 202 gagagcaaggacgtcggcaagggcttccgctgcatccgcatggtcaacaacacccgcctc 261 Query: 427 aacttcgacgccctcaacggcgacaagtaccacggcggcgtccgc 471 ||||| |||||| || ||||||||||| ||||||||||||||||| Sbjct: 262 aacttggacgccttccacggcgacaaggaccacggcggcgtccgc 306
>gb|BT016442.1| Zea mays clone Contig275 mRNA sequence Length = 1443 Score = 178 bits (90), Expect = 1e-41 Identities = 204/242 (84%) Strand = Plus / Plus Query: 228 ggacgaggagggctaccccgccttcgccatcgtgaacaaggccactggccaggccatcaa 287 |||||||||||||||||| |||||||| |||| ||||||| ||| ||| |||| |||| Sbjct: 754 ggacgaggagggctacccggccttcgcgctcgtcaacaaggtcaccggcgaggcgctcaa 813 Query: 288 gcactccctcggccagtcccaccctgtgcgtctggtgccgtacaacccggacttcctgga 347 ||||||| || ||| |||||| || || ||||| ||||||||||||| || ||| Sbjct: 814 gcactccacggggcagggccaccccgtcaagctcgtgccctacaacccggactaccagga 873 Query: 348 cgagtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgcgcat 407 |||||| ||||| ||||| |||||| | ||||| |||||||||||| | ||||| ||||| Sbjct: 874 cgagtccgtgctctggaccgagagccgcgacgtcggcaacggcttccgctgcgtccgcat 933 Query: 408 ggtgaacaacatctacctcaacttcgacgccctcaacggcgacaagtaccacggcggcgt 467 ||| ||||||||||||||||||||||||||| || ||||||||||| |||||||||||| Sbjct: 934 ggtcaacaacatctacctcaacttcgacgccttccacggcgacaaggcccacggcggcgt 993 Query: 468 cc 469 || Sbjct: 994 cc 995 Score = 133 bits (67), Expect = 6e-28 Identities = 109/123 (88%) Strand = Plus / Plus Query: 345 ggacgagtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgcg 404 ||||| ||||||||||||||||||||||| |||||||||||| |||||| | ||| | || Sbjct: 373 ggacgcgtcggtgctgtggacggagagcaaggacgtgggcaagggcttccgctgcatccg 432 Query: 405 catggtgaacaacatctacctcaacttcgacgccctcaacggcgacaagtaccacggcgg 464 |||||| ||||||| | |||||||||||||||| || ||||||||||| |||||||||| Sbjct: 433 catggtcaacaacacccgcctcaacttcgacgccttccacggcgacaaggaccacggcgg 492 Query: 465 cgt 467 ||| Sbjct: 493 cgt 495 Score = 109 bits (55), Expect = 8e-21 Identities = 175/215 (81%) Strand = Plus / Plus Query: 97 aagatctactgccgcgccaaccccaactacgccatgtccgtgcgcaacggcaaggtggtg 156 ||||||| ||||||||||||| |||||| | || |||| ||| ||||| || ||| Sbjct: 125 aagatcttctgccgcgccaacgagaactactgcctggccgtccgcgacggcgccgtcgtg 184 Query: 157 ctcgcgccggccaaccccaaggacgactaccagcactggatcaaggacatgaggtggagc 216 || || |||| |||||||||||||||| ||||||||||| |||||||||| | | ||| Sbjct: 185 ctggccccggtcaaccccaaggacgaccaccagcactggtacaaggacatgcgcttcagc 244 Query: 217 accagcatcaaggacgaggagggctaccccgccttcgccatcgtgaacaaggccactggc 276 ||| | ||||||||||||| ||| || || ||||| |||| ||||||||||| || Sbjct: 245 acccgggtcaaggacgaggaaggcatgccggcgttcgcgctcgtcaacaaggccacgggg 304 Query: 277 caggccatcaagcactccctcggccagtcccaccc 311 | |||||||||||||||||||||||||||||||| Sbjct: 305 ctcgccatcaagcactccctcggccagtcccaccc 339
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 176 bits (89), Expect = 4e-41 Identities = 137/153 (89%) Strand = Plus / Minus Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 ||||||||||||||||| | | || |||||||||||||||||||||||||||| | ||| Sbjct: 11931576 ctggtgccgtacaaccccggataccaggacgagtcggtgctgtggacggagagccgcgac 11931517 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 || || |||||||| | ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 11931516 gtcgggcacggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgcc 11931457 Query: 439 ctcaacggcgacaagtaccacggcggcgtccgc 471 ||| ||||||||||| ||||||||||||||||| Sbjct: 11931456 ctccacggcgacaaggaccacggcggcgtccgc 11931424 Score = 139 bits (70), Expect = 9e-30 Identities = 106/118 (89%) Strand = Plus / Minus Query: 178 gacgactaccagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggag 237 ||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct: 11931826 gacgagtaccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaa 11931767 Query: 238 ggctaccccgccttcgccatcgtgaacaaggccactggccaggccatcaagcactccc 295 |||||||||||||||||| |||| |||| || ||| ||| |||||||||||||||||| Sbjct: 11931766 ggctaccccgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactccc 11931709 Score = 137 bits (69), Expect = 4e-29 Identities = 129/149 (86%) Strand = Plus / Minus Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 |||| ||||| ||||||||| | || |||||||||||||||||||||||||||| | ||| Sbjct: 11932192 ctggcgccgttcaacccggagtacccggacgagtcggtgctgtggacggagagcggcgac 11932133 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 |||||||| ||||| | ||| | |||||| ||||||||||| ||||||||||||||| Sbjct: 11932132 gtgggcaagagcttccgctgcatccgcatgctgaacaacatccgcctcaacttcgacgcg 11932073 Query: 439 ctcaacggcgacaagtaccacggcggcgt 467 || ||||||||||| ||||||||||||| Sbjct: 11932072 ttccacggcgacaaggaccacggcggcgt 11932044 Score = 93.7 bits (47), Expect = 5e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 185 accagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacc 244 ||||||||||| |||||||||| | | ||| ||| |||||||||||||||||| ||| Sbjct: 11932435 accagcactggtacaaggacatgcgcttcagcgccaagatcaaggacgaggagggcaacc 11932376 Query: 245 ccgccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccag 303 | || ||||| |||| ||||||||||| |||| |||||||||||||||||||||||| Sbjct: 11932375 cggcgttcgcgctcgtcaacaaggccaccggcctcgccatcaagcactccctcggccag 11932317 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 221 gcatcaaggacgaggagggctaccccgccttcgccatcgtgaacaaggccactggccagg 280 ||||||||||||||| ||| || |||||||| |||||||||||||||||||| | | Sbjct: 11842933 gcatcaaggacgaggcaggccgtcctgccttcgcactcgtgaacaaggccactggcgatg 11842992 Query: 281 ccatcaagcactcc 294 || |||| |||||| Sbjct: 11842993 ccctcaaacactcc 11843006 Score = 46.1 bits (23), Expect = 0.10 Identities = 62/75 (82%) Strand = Plus / Plus Query: 343 ctggacgagtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtg 402 |||||||||||||| |||||||| | |||| |||||||| | |||||| |||| || | Sbjct: 11843167 ctggacgagtcggtcctgtggactgcgagcgtggacgtggccgacggctacaggcgcatc 11843226 Query: 403 cgcatggtgaacaac 417 | |||| |||||||| Sbjct: 11843227 cacatgatgaacaac 11843241 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 257 tcgtgaacaaggccactggccaggccatcaagcactc 293 ||||||| |||||||| ||| | |||||||||||||| Sbjct: 11852585 tcgtgaataaggccaccggcgaagccatcaagcactc 11852621
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 176 bits (89), Expect = 4e-41 Identities = 137/153 (89%) Strand = Plus / Minus Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 ||||||||||||||||| | | || |||||||||||||||||||||||||||| | ||| Sbjct: 11928339 ctggtgccgtacaaccccggataccaggacgagtcggtgctgtggacggagagccgcgac 11928280 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 || || |||||||| | ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 11928279 gtcgggcacggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgcc 11928220 Query: 439 ctcaacggcgacaagtaccacggcggcgtccgc 471 ||| ||||||||||| ||||||||||||||||| Sbjct: 11928219 ctccacggcgacaaggaccacggcggcgtccgc 11928187 Score = 139 bits (70), Expect = 9e-30 Identities = 106/118 (89%) Strand = Plus / Minus Query: 178 gacgactaccagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggag 237 ||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct: 11928589 gacgagtaccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaa 11928530 Query: 238 ggctaccccgccttcgccatcgtgaacaaggccactggccaggccatcaagcactccc 295 |||||||||||||||||| |||| |||| || ||| ||| |||||||||||||||||| Sbjct: 11928529 ggctaccccgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactccc 11928472 Score = 137 bits (69), Expect = 4e-29 Identities = 129/149 (86%) Strand = Plus / Minus Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 |||| ||||| ||||||||| | || |||||||||||||||||||||||||||| | ||| Sbjct: 11928955 ctggcgccgttcaacccggagtacccggacgagtcggtgctgtggacggagagcggcgac 11928896 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 |||||||| ||||| | ||| | |||||| ||||||||||| ||||||||||||||| Sbjct: 11928895 gtgggcaagagcttccgctgcatccgcatgctgaacaacatccgcctcaacttcgacgcg 11928836 Query: 439 ctcaacggcgacaagtaccacggcggcgt 467 || ||||||||||| ||||||||||||| Sbjct: 11928835 ttccacggcgacaaggaccacggcggcgt 11928807 Score = 93.7 bits (47), Expect = 5e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 185 accagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacc 244 ||||||||||| |||||||||| | | ||| ||| |||||||||||||||||| ||| Sbjct: 11929198 accagcactggtacaaggacatgcgcttcagcgccaagatcaaggacgaggagggcaacc 11929139 Query: 245 ccgccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccag 303 | || ||||| |||| ||||||||||| |||| |||||||||||||||||||||||| Sbjct: 11929138 cggcgttcgcgctcgtcaacaaggccaccggcctcgccatcaagcactccctcggccag 11929080 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 221 gcatcaaggacgaggagggctaccccgccttcgccatcgtgaacaaggccactggccagg 280 ||||||||||||||| ||| || |||||||| |||||||||||||||||||| | | Sbjct: 11839696 gcatcaaggacgaggcaggccgtcctgccttcgcactcgtgaacaaggccactggcgatg 11839755 Query: 281 ccatcaagcactcc 294 || |||| |||||| Sbjct: 11839756 ccctcaaacactcc 11839769 Score = 46.1 bits (23), Expect = 0.10 Identities = 62/75 (82%) Strand = Plus / Plus Query: 343 ctggacgagtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtg 402 |||||||||||||| |||||||| | |||| |||||||| | |||||| |||| || | Sbjct: 11839930 ctggacgagtcggtcctgtggactgcgagcgtggacgtggccgacggctacaggcgcatc 11839989 Query: 403 cgcatggtgaacaac 417 | |||| |||||||| Sbjct: 11839990 cacatgatgaacaac 11840004 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 257 tcgtgaacaaggccactggccaggccatcaagcactc 293 ||||||| |||||||| ||| | |||||||||||||| Sbjct: 11849348 tcgtgaataaggccaccggcgaagccatcaagcactc 11849384
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 176 bits (89), Expect = 4e-41 Identities = 137/153 (89%) Strand = Plus / Minus Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 ||||||||||||||||| | | || |||||||||||||||||||||||||||| | ||| Sbjct: 32838 ctggtgccgtacaaccccggataccaggacgagtcggtgctgtggacggagagccgcgac 32779 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 || || |||||||| | ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 32778 gtcgggcacggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgcc 32719 Query: 439 ctcaacggcgacaagtaccacggcggcgtccgc 471 ||| ||||||||||| ||||||||||||||||| Sbjct: 32718 ctccacggcgacaaggaccacggcggcgtccgc 32686 Score = 139 bits (70), Expect = 9e-30 Identities = 106/118 (89%) Strand = Plus / Minus Query: 178 gacgactaccagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggag 237 ||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct: 33088 gacgagtaccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaa 33029 Query: 238 ggctaccccgccttcgccatcgtgaacaaggccactggccaggccatcaagcactccc 295 |||||||||||||||||| |||| |||| || ||| ||| |||||||||||||||||| Sbjct: 33028 ggctaccccgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactccc 32971 Score = 137 bits (69), Expect = 4e-29 Identities = 129/149 (86%) Strand = Plus / Minus Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 |||| ||||| ||||||||| | || |||||||||||||||||||||||||||| | ||| Sbjct: 33454 ctggcgccgttcaacccggagtacccggacgagtcggtgctgtggacggagagcggcgac 33395 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 |||||||| ||||| | ||| | |||||| ||||||||||| ||||||||||||||| Sbjct: 33394 gtgggcaagagcttccgctgcatccgcatgctgaacaacatccgcctcaacttcgacgcg 33335 Query: 439 ctcaacggcgacaagtaccacggcggcgt 467 || ||||||||||| ||||||||||||| Sbjct: 33334 ttccacggcgacaaggaccacggcggcgt 33306 Score = 93.7 bits (47), Expect = 5e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 185 accagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacc 244 ||||||||||| |||||||||| | | ||| ||| |||||||||||||||||| ||| Sbjct: 33697 accagcactggtacaaggacatgcgcttcagcgccaagatcaaggacgaggagggcaacc 33638 Query: 245 ccgccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccag 303 | || ||||| |||| ||||||||||| |||| |||||||||||||||||||||||| Sbjct: 33637 cggcgttcgcgctcgtcaacaaggccaccggcctcgccatcaagcactccctcggccag 33579
>ref|NM_183466.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1093 Score = 161 bits (81), Expect = 3e-36 Identities = 231/281 (82%) Strand = Plus / Plus Query: 187 cagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacccc 246 ||||||||| | |||||||||| || ||||| || | || |||||||| || ||||| Sbjct: 454 cagcactgggtgaaggacatgaagtacagcacgagagtgaaagacgaggaagggtaccct 513 Query: 247 gccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagtcc 306 ||| | || |||| ||||||||||| ||| | ||| ||||||||||| ||||||| ||| Sbjct: 514 gccatggcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcc 573 Query: 307 caccctgtgcgtctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacg 366 |||||||| ||| |||||| ||||| || || | | |||||||||| |||||||||||| Sbjct: 574 caccctgtccgtttggtgcgctacaatccagagtacatggacgagtctgtgctgtggacg 633 Query: 367 gagagcagggacgtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctc 426 |||||||||||||| || | || || ||||| | | ||||||||||||||||||||| Sbjct: 634 gagagcagggacgttgggagtgggtttcggtgcatcaggatggtgaacaacatctacctc 693 Query: 427 aacttcgacgccctcaacggcgacaagtaccacggcggcgt 467 ||||||||||| ||| | || |||||| ||||||||||||| Sbjct: 694 aacttcgacgcgctccatggagacaaggaccacggcggcgt 734
>gb|BT017376.1| Zea mays clone EL01N0325G07.c mRNA sequence Length = 778 Score = 161 bits (81), Expect = 3e-36 Identities = 132/149 (88%) Strand = Plus / Plus Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 |||||||||| ||||||||| | || |||||||||||||||||||||||||||| | ||| Sbjct: 470 ctggtgccgttcaacccggagtaccaggacgagtcggtgctgtggacggagagcggcgac 529 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 |||||||| |||||| | ||| | |||||||||||||||||| |||||||||||||||| Sbjct: 530 gtgggcaagggcttccgctgcatccgcatggtgaacaacatccgcctcaacttcgacgcc 589 Query: 439 ctcaacggcgacaagtaccacggcggcgt 467 || ||||||||||| |||||||||||| Sbjct: 590 ttccacggcgacaagggccacggcggcgt 618 Score = 115 bits (58), Expect = 1e-22 Identities = 148/178 (83%) Strand = Plus / Plus Query: 134 ccgtgcgcaacggcaaggtggtgctcgcgccggccaaccccaaggacgactaccagcact 193 |||| ||| ||||||| |||||||| || || |||||||| ||||| ||||||||| Sbjct: 192 ccgtccgcgacggcaacgtggtgctggcccccgccaacccgcgcgacgagcaccagcact 251 Query: 194 ggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctaccccgccttcg 253 || |||||||||| | | |||||| ||||||||||||||||| |||| || |||| Sbjct: 252 ggtacaaggacatgcgcttcagcacccaggtcaaggacgaggagggcaaccctgcgttcg 311 Query: 254 ccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagtcccaccc 311 || |||| |||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 312 ccctcgtcaacaaggccactgggctcgccatcaagcactccctcggccagtcccaccc 369
>dbj|AK104820.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A11, full insert sequence Length = 1093 Score = 161 bits (81), Expect = 3e-36 Identities = 231/281 (82%) Strand = Plus / Plus Query: 187 cagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacccc 246 ||||||||| | |||||||||| || ||||| || | || |||||||| || ||||| Sbjct: 454 cagcactgggtgaaggacatgaagtacagcacgagagtgaaagacgaggaagggtaccct 513 Query: 247 gccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagtcc 306 ||| | || |||| ||||||||||| ||| | ||| ||||||||||| ||||||| ||| Sbjct: 514 gccatggcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcc 573 Query: 307 caccctgtgcgtctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacg 366 |||||||| ||| |||||| ||||| || || | | |||||||||| |||||||||||| Sbjct: 574 caccctgtccgtttggtgcgctacaatccagagtacatggacgagtctgtgctgtggacg 633 Query: 367 gagagcagggacgtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctc 426 |||||||||||||| || | || || ||||| | | ||||||||||||||||||||| Sbjct: 634 gagagcagggacgttgggagtgggtttcggtgcatcaggatggtgaacaacatctacctc 693 Query: 427 aacttcgacgccctcaacggcgacaagtaccacggcggcgt 467 ||||||||||| ||| | || |||||| ||||||||||||| Sbjct: 694 aacttcgacgcgctccatggagacaaggaccacggcggcgt 734
>dbj|AK104555.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-F10, full insert sequence Length = 1088 Score = 161 bits (81), Expect = 3e-36 Identities = 231/281 (82%) Strand = Plus / Plus Query: 187 cagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacccc 246 ||||||||| | |||||||||| || ||||| || | || |||||||| || ||||| Sbjct: 451 cagcactgggtgaaggacatgaagtacagcacgagagtgaaagacgaggaagggtaccct 510 Query: 247 gccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagtcc 306 ||| | || |||| ||||||||||| ||| | ||| ||||||||||| ||||||| ||| Sbjct: 511 gccatggcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcc 570 Query: 307 caccctgtgcgtctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacg 366 |||||||| ||| |||||| ||||| || || | | |||||||||| |||||||||||| Sbjct: 571 caccctgtccgtttggtgcgctacaatccagagtacatggacgagtctgtgctgtggacg 630 Query: 367 gagagcagggacgtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctc 426 |||||||||||||| || | || || ||||| | | ||||||||||||||||||||| Sbjct: 631 gagagcagggacgttgggagtgggtttcggtgcatcaggatggtgaacaacatctacctc 690 Query: 427 aacttcgacgccctcaacggcgacaagtaccacggcggcgt 467 ||||||||||| ||| | || |||||| ||||||||||||| Sbjct: 691 aacttcgacgcgctccatggagacaaggaccacggcggcgt 731
>dbj|AK071375.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095C18, full insert sequence Length = 1392 Score = 161 bits (81), Expect = 3e-36 Identities = 231/281 (82%) Strand = Plus / Plus Query: 187 cagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacccc 246 ||||||||| | |||||||||| || ||||| || | || |||||||| || ||||| Sbjct: 737 cagcactgggtgaaggacatgaagtacagcacgagagtgaaagacgaggaagggtaccct 796 Query: 247 gccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagtcc 306 ||| | || |||| ||||||||||| ||| | ||| ||||||||||| ||||||| ||| Sbjct: 797 gccatggcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcc 856 Query: 307 caccctgtgcgtctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacg 366 |||||||| ||| |||||| ||||| || || | | |||||||||| |||||||||||| Sbjct: 857 caccctgtccgtttggtgcgctacaatccagagtacatggacgagtctgtgctgtggacg 916 Query: 367 gagagcagggacgtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctc 426 |||||||||||||| || | || || ||||| | | ||||||||||||||||||||| Sbjct: 917 gagagcagggacgttgggagtgggtttcggtgcatcaggatggtgaacaacatctacctc 976 Query: 427 aacttcgacgccctcaacggcgacaagtaccacggcggcgt 467 ||||||||||| ||| | || |||||| ||||||||||||| Sbjct: 977 aacttcgacgcgctccatggagacaaggaccacggcggcgt 1017
>dbj|AK060132.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C04, full insert sequence Length = 1220 Score = 161 bits (81), Expect = 3e-36 Identities = 231/281 (82%) Strand = Plus / Plus Query: 187 cagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacccc 246 ||||||||| | |||||||||| || ||||| || | || |||||||| || ||||| Sbjct: 494 cagcactgggtgaaggacatgaagtacagcacgagagtgaaagacgaggaagggtaccct 553 Query: 247 gccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagtcc 306 ||| | || |||| ||||||||||| ||| | ||| ||||||||||| ||||||| ||| Sbjct: 554 gccatggcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcc 613 Query: 307 caccctgtgcgtctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacg 366 |||||||| ||| |||||| ||||| || || | | |||||||||| |||||||||||| Sbjct: 614 caccctgtccgtttggtgcgctacaatccagagtacatggacgagtctgtgctgtggacg 673 Query: 367 gagagcagggacgtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctc 426 |||||||||||||| || | || || ||||| | | ||||||||||||||||||||| Sbjct: 674 gagagcagggacgttgggagtgggtttcggtgcatcaggatggtgaacaacatctacctc 733 Query: 427 aacttcgacgccctcaacggcgacaagtaccacggcggcgt 467 ||||||||||| ||| | || |||||| ||||||||||||| Sbjct: 734 aacttcgacgcgctccatggagacaaggaccacggcggcgt 774
>gb|BT018000.1| Zea mays clone EL01N0526G03.c mRNA sequence Length = 842 Score = 155 bits (78), Expect = 2e-34 Identities = 126/142 (88%) Strand = Plus / Plus Query: 328 tacaacccggacttcctggacgagtcggtgctgtggacggagagcagggacgtgggcaac 387 ||||||||||||| || ||||||||| ||||| ||||| |||||| | ||||| |||||| Sbjct: 288 tacaacccggactaccaggacgagtccgtgctctggaccgagagccgcgacgtcggcaac 347 Query: 388 ggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgccctcaacggc 447 |||||| | ||||| |||||||| ||||||||||||||||||||||||||| || ||||| Sbjct: 348 ggcttccgctgcgtccgcatggtcaacaacatctacctcaacttcgacgccttccacggc 407 Query: 448 gacaagtaccacggcggcgtcc 469 |||||| |||||||||||||| Sbjct: 408 gacaaggcccacggcggcgtcc 429 Score = 83.8 bits (42), Expect = 5e-13 Identities = 159/198 (80%) Strand = Plus / Plus Query: 97 aagatctactgccgcgccaaccccaactacgccatgtccgtgcgcaacggcaaggtggtg 156 ||||||| ||||||||||||| |||||| | || |||| ||| ||||| || ||| Sbjct: 57 aagatcttctgccgcgccaacgagaactactgcctggccgtccgcgacggcgccgtcgtg 116 Query: 157 ctcgcgccggccaaccccaaggacgactaccagcactggatcaaggacatgaggtggagc 216 || || |||| |||||||||||||||| ||||||||||| |||||||||| | | ||| Sbjct: 117 ctggccccggtcaaccccaaggacgaccaccagcactggtacaaggacatgcgcttcagc 176 Query: 217 accagcatcaaggacgaggagggctaccccgccttcgccatcgtgaacaaggccactggc 276 ||| | | |||||||||||||||||| |||||||| |||| ||||||| ||| ||| Sbjct: 177 acccgggtgcgggacgaggagggctacccggccttcgcgctcgtcaacaaggtcaccggc 236 Query: 277 caggccatcaagcactcc 294 |||| ||||||||||| Sbjct: 237 gaggcgctcaagcactcc 254
>emb|Y08987.1|OSR40G2 O.sativa osr40g2 gene Length = 2101 Score = 131 bits (66), Expect = 2e-27 Identities = 129/150 (86%) Strand = Plus / Plus Query: 322 gtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggacgtg 381 ||||||| ||||||||| | | ||||| ||||||||||||||||||||||| |||||| Sbjct: 1135 gtgccgttcaacccggagtacgaggacgcgtcggtgctgtggacggagagcaaggacgtc 1194 Query: 382 ggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgccctc 441 ||||| |||||| | ||| | |||||||| ||||||| | ||||||||| |||||| || Sbjct: 1195 ggcaagggcttccgctgcatccgcatggtcaacaacacccgcctcaacttggacgccttc 1254 Query: 442 aacggcgacaagtaccacggcggcgtccgc 471 ||||||||||| ||||||||||||||||| Sbjct: 1255 cacggcgacaaggaccacggcggcgtccgc 1284 Score = 117 bits (59), Expect = 3e-23 Identities = 125/147 (85%) Strand = Plus / Plus Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 ||||| || |||||||| || | || ||||||||| || ||||||| |||||||| | | Sbjct: 1819 ctggttccctacaacccagagtaccaggacgagtctgtactgtggagggagagcaagcat 1878 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 |||||||| |||||| | ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 1879 gtgggcaagggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgcc 1938 Query: 439 ctcaacggcgacaagtaccacggcggc 465 || | ||||||||| | ||||||||| Sbjct: 1939 ttccatggcgacaaggatcacggcggc 1965 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 187 cagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacccc 246 ||||||||| ||||||||||||||| ||||||| | ||||||| ||||||| || Sbjct: 893 cagcactggttcaaggacatgaggttcagcaccaaggtgaaggacggggagggcatgccg 952 Query: 247 gccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagtcc 306 || |||||| |||| ||||||||||| || | ||| ||||||||||||||||||||||| Sbjct: 953 gcgttcgccctcgtcaacaaggccaccggactcgccgtcaagcactccctcggccagtcc 1012 Query: 307 caccc 311 ||||| Sbjct: 1013 caccc 1017 Score = 63.9 bits (32), Expect = 4e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 191 actggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctaccccgcct 250 |||||||||||||||||||| |||| || |||| ||||||||| |||||||| || | Sbjct: 1601 actggatcaaggacatgaggcacagcaacaagatcagggacgaggaaggctacccggcgt 1660 Query: 251 tcgccatcgtgaacaaggccactggccaggccatcaagcactcc 294 |||| | || ||||||| ||| ||| | ||||||||||||||| Sbjct: 1661 tcgcgctggtcaacaaggtcaccggcgaagccatcaagcactcc 1704
>gb|BT018342.1| Zea mays clone EL01T0403C03.c mRNA sequence Length = 690 Score = 121 bits (61), Expect = 2e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 345 ggacgagtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgcg 404 ||||| ||||||||||||||||||||||| |||||||||||| |||||| | ||| | || Sbjct: 123 ggacgcgtcggtgctgtggacggagagcaaggacgtgggcaagggcttccgctgcatccg 182 Query: 405 catggtgaacaacatctacctcaacttcgacgccctcaacggcgacaagtaccacggcgg 464 |||||| ||||||| | |||||||||||||||| || ||||||||||| || |||||| Sbjct: 183 catggtcaacaacacccgcctcaacttcgacgccttccacggcgacaaggcccccggcgg 242 Query: 465 cgtcc 469 ||||| Sbjct: 243 cgtcc 247 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 257 tcgtgaacaaggccactggccaggccatcaagcactccctcggccagtcccaccc 311 |||| ||||||||||| || | |||||||||||||||||||||||||||||||| Sbjct: 35 tcgtcaacaaggccacggggctcgccatcaagcactccctcggccagtcccaccc 89
>gb|BT017211.1| Zea mays clone EL01N0372B08.c mRNA sequence Length = 567 Score = 121 bits (61), Expect = 2e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 319 ctggtgccgtacaacccggacttcctggacgagtcggtgctgtggacggagagcagggac 378 |||||||| |||||||| | | || |||||||||||||||||||||||||| | | ||| Sbjct: 19 ctggtgccctacaaccccggttaccaggacgagtcggtgctgtggacggagaaccgcgac 78 Query: 379 gtgggcaacggcttcaggtgcgtgcgcatggtgaacaacatctacctcaacttcgacgcc 438 || ||| |||||||| | ||||| |||||||| |||||||| |||||||| || ||| || Sbjct: 79 gtcggccacggcttccgctgcgtccgcatggtcaacaacatttacctcaatttggacccc 138 Query: 439 ctcaacggcgacaagtaccacggcggcgt 467 || ||||||||||| ||||||||||||| Sbjct: 139 ttccacggcgacaaggaccacggcggcgt 167
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 111 bits (56), Expect = 2e-21 Identities = 107/124 (86%) Strand = Plus / Plus Query: 344 tggacgagtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgc 403 |||||||||| |||||||||||||||||||||||||| || | || || ||||| | Sbjct: 227588 tggacgagtctgtgctgtggacggagagcagggacgttgggagtgggtttcggtgcatca 227647 Query: 404 gcatggtgaacaacatctacctcaacttcgacgccctcaacggcgacaagtaccacggcg 463 | |||||||||||||||||||||||||||||||| ||| | || |||||| ||||||||| Sbjct: 227648 ggatggtgaacaacatctacctcaacttcgacgcgctccatggagacaaggaccacggcg 227707 Query: 464 gcgt 467 |||| Sbjct: 227708 gcgt 227711 Score = 63.9 bits (32), Expect = 4e-07 Identities = 104/128 (81%) Strand = Plus / Plus Query: 187 cagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacccc 246 ||||||||| | |||||||||| || ||||| || | || |||||||| || ||||| Sbjct: 226739 cagcactgggtgaaggacatgaagtacagcacgagagtgaaagacgaggaagggtaccct 226798 Query: 247 gccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagtcc 306 ||| | || |||| ||||||||||| ||| | ||| ||||||||||| ||||||| ||| Sbjct: 226799 gccatggcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcc 226858 Query: 307 caccctgt 314 |||||||| Sbjct: 226859 caccctgt 226866
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 111 bits (56), Expect = 2e-21 Identities = 107/124 (86%) Strand = Plus / Plus Query: 344 tggacgagtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgc 403 |||||||||| |||||||||||||||||||||||||| || | || || ||||| | Sbjct: 69258 tggacgagtctgtgctgtggacggagagcagggacgttgggagtgggtttcggtgcatca 69317 Query: 404 gcatggtgaacaacatctacctcaacttcgacgccctcaacggcgacaagtaccacggcg 463 | |||||||||||||||||||||||||||||||| ||| | || |||||| ||||||||| Sbjct: 69318 ggatggtgaacaacatctacctcaacttcgacgcgctccatggagacaaggaccacggcg 69377 Query: 464 gcgt 467 |||| Sbjct: 69378 gcgt 69381 Score = 63.9 bits (32), Expect = 4e-07 Identities = 104/128 (81%) Strand = Plus / Plus Query: 187 cagcactggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctacccc 246 ||||||||| | |||||||||| || ||||| || | || |||||||| || ||||| Sbjct: 68409 cagcactgggtgaaggacatgaagtacagcacgagagtgaaagacgaggaagggtaccct 68468 Query: 247 gccttcgccatcgtgaacaaggccactggccaggccatcaagcactccctcggccagtcc 306 ||| | || |||| ||||||||||| ||| | ||| ||||||||||| ||||||| ||| Sbjct: 68469 gccatggcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcc 68528 Query: 307 caccctgt 314 |||||||| Sbjct: 68529 caccctgt 68536
>gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0015J03, complete sequence Length = 165933 Score = 65.9 bits (33), Expect = 1e-07 Identities = 74/87 (85%), Gaps = 3/87 (3%) Strand = Plus / Minus Query: 349 gagtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgcgcatg 408 ||||||||||||||| ||||||||| | || | ||| |||||||| | ||||| || ||| Sbjct: 162050 gagtcggtgctgtgggcggagagcaagaacatcggccacggcttccgctgcgtccggatg 161991 Query: 409 gtgaacaacatctacctcaacttcgac 435 ||| ||||||||||||||||||||| Sbjct: 161990 gtg---aacatctacctcaacttcgac 161967 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 224 tcaaggacgaggagggctaccccgccttcgccatcgtgaacaaggccactggccaggcca 283 |||||||| |||| ||||||| || ||||| | |||||||||||||| |||| |||| Sbjct: 162403 tcaaggacaaggaaggctacctggcgttcgcgctggtgaacaaggccaccagccaagcca 162344 Query: 284 tcaagcactccctcgg 299 |||||||||||||||| Sbjct: 162343 tcaagcactccctcgg 162328
>gb|AC090488.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081F12 from chromosome 10, complete sequence Length = 128388 Score = 65.9 bits (33), Expect = 1e-07 Identities = 74/87 (85%), Gaps = 3/87 (3%) Strand = Plus / Minus Query: 349 gagtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgcgcatg 408 ||||||||||||||| ||||||||| | || | ||| |||||||| | ||||| || ||| Sbjct: 56117 gagtcggtgctgtgggcggagagcaagaacatcggccacggcttccgctgcgtccggatg 56058 Query: 409 gtgaacaacatctacctcaacttcgac 435 ||| ||||||||||||||||||||| Sbjct: 56057 gtg---aacatctacctcaacttcgac 56034 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 224 tcaaggacgaggagggctaccccgccttcgccatcgtgaacaaggccactggccaggcca 283 |||||||| |||| ||||||| || ||||| | |||||||||||||| |||| |||| Sbjct: 56470 tcaaggacaaggaaggctacctggcgttcgcgctggtgaacaaggccaccagccaagcca 56411 Query: 284 tcaagcactccctcgg 299 |||||||||||||||| Sbjct: 56410 tcaagcactccctcgg 56395
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 65.9 bits (33), Expect = 1e-07 Identities = 74/87 (85%), Gaps = 3/87 (3%) Strand = Plus / Minus Query: 349 gagtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgcgcatg 408 ||||||||||||||| ||||||||| | || | ||| |||||||| | ||||| || ||| Sbjct: 4394509 gagtcggtgctgtgggcggagagcaagaacatcggccacggcttccgctgcgtccggatg 4394450 Query: 409 gtgaacaacatctacctcaacttcgac 435 ||| ||||||||||||||||||||| Sbjct: 4394449 gtg---aacatctacctcaacttcgac 4394426 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 224 tcaaggacgaggagggctaccccgccttcgccatcgtgaacaaggccactggccaggcca 283 |||||||| |||| ||||||| || ||||| | |||||||||||||| |||| |||| Sbjct: 4394862 tcaaggacaaggaaggctacctggcgttcgcgctggtgaacaaggccaccagccaagcca 4394803 Query: 284 tcaagcactccctcgg 299 |||||||||||||||| Sbjct: 4394802 tcaagcactccctcgg 4394787
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 65.9 bits (33), Expect = 1e-07 Identities = 74/87 (85%), Gaps = 3/87 (3%) Strand = Plus / Minus Query: 349 gagtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtgcgcatg 408 ||||||||||||||| ||||||||| | || | ||| |||||||| | ||||| || ||| Sbjct: 4395330 gagtcggtgctgtgggcggagagcaagaacatcggccacggcttccgctgcgtccggatg 4395271 Query: 409 gtgaacaacatctacctcaacttcgac 435 ||| ||||||||||||||||||||| Sbjct: 4395270 gtg---aacatctacctcaacttcgac 4395247 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 224 tcaaggacgaggagggctaccccgccttcgccatcgtgaacaaggccactggccaggcca 283 |||||||| |||| ||||||| || ||||| | |||||||||||||| |||| |||| Sbjct: 4395683 tcaaggacaaggaaggctacctggcgttcgcgctggtgaacaaggccaccagccaagcca 4395624 Query: 284 tcaagcactccctcgg 299 |||||||||||||||| Sbjct: 4395623 tcaagcactccctcgg 4395608
>gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0035J18, from chromsome 3, complete sequence Length = 162711 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 221 gcatcaaggacgaggagggctaccccgccttcgccatcgtgaacaaggccactggccagg 280 ||||||||||||||| ||| || |||||||| |||||||||||||||||||| | | Sbjct: 67720 gcatcaaggacgaggcaggccgtcctgccttcgcactcgtgaacaaggccactggcgatg 67661 Query: 281 ccatcaagcactcc 294 || |||| |||||| Sbjct: 67660 ccctcaaacactcc 67647 Score = 46.1 bits (23), Expect = 0.10 Identities = 62/75 (82%) Strand = Plus / Minus Query: 343 ctggacgagtcggtgctgtggacggagagcagggacgtgggcaacggcttcaggtgcgtg 402 |||||||||||||| |||||||| | |||| |||||||| | |||||| |||| || | Sbjct: 67486 ctggacgagtcggtcctgtggactgcgagcgtggacgtggccgacggctacaggcgcatc 67427 Query: 403 cgcatggtgaacaac 417 | |||| |||||||| Sbjct: 67426 cacatgatgaacaac 67412 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 257 tcgtgaacaaggccactggccaggccatcaagcactc 293 ||||||| |||||||| ||| | |||||||||||||| Sbjct: 58068 tcgtgaataaggccaccggcgaagccatcaagcactc 58032
>dbj|AB205052.1| Chrysanthemum x morifolium ZDS mRNA for zeta-carotene desaturase, complete cds Length = 2144 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 193 tggatcaaggacatgaggtgga 214 |||||||||||||||||||||| Sbjct: 541 tggatcaaggacatgaggtgga 562
>gb|DQ412572.1| Lycopersicon esculentum zeta-carotene desaturase (ZDS) mRNA, complete cds Length = 1850 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 193 tggatcaaggacatgaggtgga 214 |||||||||||||||||||||| Sbjct: 296 tggatcaaggacatgaggtgga 317
>dbj|AB180798.1| Actinobacterium Aac-15 gene for DNA gyrase subunit B, partial cds Length = 1197 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 225 caaggacgaggagggctaccccgcct 250 |||||||||||||||| ||||||||| Sbjct: 318 caaggacgaggagggcaaccccgcct 343
>emb|X89897.1|CAZDSGENE C.annuum mRNA for zeta-carotene / neurosporene dehydrogenase Length = 1982 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 193 tggatcaaggacatgaggtgga 214 |||||||||||||||||||||| Sbjct: 305 tggatcaaggacatgaggtgga 326
>gb|AF195507.1|AF195507 Lycopersicon esculentum zeta-carotene desaturase (zds) mRNA, complete cds Length = 1931 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 193 tggatcaaggacatgaggtgga 214 |||||||||||||||||||||| Sbjct: 396 tggatcaaggacatgaggtgga 417
>emb|X97189.1|CACCEL3 Capsicum annuum mRNA for endo-beta-1,4-glucanase, ccel3 Length = 2352 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 359 tgtggacggagagcagggacgtggg 383 ||||||| ||||||||||||||||| Sbjct: 406 tgtggacagagagcagggacgtggg 382
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 335 cggacttcctggacgagtcggtgctgtggacgg 367 ||||||||||||| ||||| |||||||||||| Sbjct: 30539 cggacttcctggagcagtcgctgctgtggacgg 30507
>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence Length = 181148 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 gcgtctggtgccgtacaacc 334 |||||||||||||||||||| Sbjct: 171170 gcgtctggtgccgtacaacc 171151
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 tcaacttcgacgccctcaac 444 |||||||||||||||||||| Sbjct: 1850061 tcaacttcgacgccctcaac 1850080
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 cgtgcgcaacggcaaggtggtgct 158 ||||||| |||||||||||||||| Sbjct: 778919 cgtgcgcgacggcaaggtggtgct 778896
>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13 Length = 347496 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 tcaacttcgacgccctcaac 444 |||||||||||||||||||| Sbjct: 127897 tcaacttcgacgccctcaac 127916
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cgcaacggcaaggtggtgct 158 |||||||||||||||||||| Sbjct: 23975 cgcaacggcaaggtggtgct 23956
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14 Length = 348251 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cgcaacggcaaggtggtgct 158 |||||||||||||||||||| Sbjct: 23976 cgcaacggcaaggtggtgct 23957
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cgcaacggcaaggtggtgct 158 |||||||||||||||||||| Sbjct: 23976 cgcaacggcaaggtggtgct 23957
>emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 6/14 Length = 300050 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 tcaacttcgacgccctcaac 444 |||||||||||||||||||| Sbjct: 230519 tcaacttcgacgccctcaac 230538
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 tcaacttcgacgccctcaac 444 |||||||||||||||||||| Sbjct: 165464 tcaacttcgacgccctcaac 165445
>dbj|AB017370.1| Gentiana lutea mRNA for zeta-Carotene Desaturase, complete cds Length = 2228 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gatcaaggacatgaggtgga 214 |||||||||||||||||||| Sbjct: 520 gatcaaggacatgaggtgga 539
>gb|AY118358.1| Drosophila melanogaster RE04357 full insert cDNA Length = 4217 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gcgtctggtgccgtacaacc 334 |||||||||||||||||||| Sbjct: 2372 gcgtctggtgccgtacaacc 2391
>gb|AC023691.3| Drosophila melanogaster X BAC RP98-12H1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179892 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 gcgtctggtgccgtacaacc 334 |||||||||||||||||||| Sbjct: 43433 gcgtctggtgccgtacaacc 43414
>ref|NM_167312.1| Drosophila melanogaster CG10353-RB, transcript variant B (CG10353), mRNA Length = 4660 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gcgtctggtgccgtacaacc 334 |||||||||||||||||||| Sbjct: 2831 gcgtctggtgccgtacaacc 2850
>ref|NM_132534.1| Drosophila melanogaster CG10353-RA, transcript variant A (CG10353), mRNA Length = 4378 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gcgtctggtgccgtacaacc 334 |||||||||||||||||||| Sbjct: 2549 gcgtctggtgccgtacaacc 2568
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 362 ggacggagagcagggacgtgggca 385 ||||||||| |||||||||||||| Sbjct: 16708184 ggacggagatcagggacgtgggca 16708161 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gtgcgcaacggcaaggtggt 155 |||||||||||||||||||| Sbjct: 11769857 gtgcgcaacggcaaggtggt 11769876
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 tcaacttcgacgccctcaac 444 |||||||||||||||||||| Sbjct: 8058624 tcaacttcgacgccctcaac 8058643 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 cggtcggccgatgccgccgcagcc 89 ||||| |||||||||||||||||| Sbjct: 4404469 cggtcagccgatgccgccgcagcc 4404446
>gb|AC122129.9| Homo sapiens chromosome 17, clone RP1-253P7, complete sequence Length = 159868 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aaggccactggccaggccat 284 |||||||||||||||||||| Sbjct: 106539 aaggccactggccaggccat 106558
>ref|XM_316089.2| Anopheles gambiae str. PEST ENSANGP00000005867 (ENSANGG00000004462), partial mRNA Length = 1563 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 gacatgaggtggagcaccagcatc 225 ||||||| |||||||||||||||| Sbjct: 568 gacatgacgtggagcaccagcatc 591
>dbj|AK102139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085J19, full insert sequence Length = 658 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 ggacggagagcagggacgtgggca 385 ||||||||| |||||||||||||| Sbjct: 153 ggacggagatcagggacgtgggca 176
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cgatgccgccgcagcctacg 93 |||||||||||||||||||| Sbjct: 3537048 cgatgccgccgcagcctacg 3537067
>dbj|AK063869.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-E07, full insert sequence Length = 655 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 ggacggagagcagggacgtgggca 385 ||||||||| |||||||||||||| Sbjct: 150 ggacggagatcagggacgtgggca 173
>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete sequence Length = 308317 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 gcgtctggtgccgtacaacc 334 |||||||||||||||||||| Sbjct: 170874 gcgtctggtgccgtacaacc 170855
>dbj|AP002989.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-475J2, complete sequence Length = 107893 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 ccactggccaggccatcaag 288 |||||||||||||||||||| Sbjct: 44751 ccactggccaggccatcaag 44732
>emb|AL354000.7|HS253P07 Homo from PAC RP1-253P07 and PAC RP1-281I13 (complete covert by PAC RP1-253P07), complete sequence Length = 159876 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 aaggccactggccaggccat 284 |||||||||||||||||||| Sbjct: 53330 aaggccactggccaggccat 53311
>gb|DQ192189.1| Daucus carota subsp. sativus putative zeta carotene desaturase (ZDS2) mRNA, complete cds Length = 2038 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gatcaaggacatgaggtgga 214 |||||||||||||||||||| Sbjct: 369 gatcaaggacatgaggtgga 388 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,732,584 Number of Sequences: 3902068 Number of extensions: 2732584 Number of successful extensions: 55056 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 71 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 53910 Number of HSP's gapped (non-prelim): 1116 length of query: 471 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 449 effective length of database: 17,147,199,772 effective search space: 7699092697628 effective search space used: 7699092697628 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
