ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd2a20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 355 bits (179), Expect = 3e-95 Identities = 193/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119945 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 119886 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 119885 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 119826 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 119825 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 119766 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 119765 gcgaagcggttgagtgccgc 119746 Score = 355 bits (179), Expect = 3e-95 Identities = 193/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94949 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 95008 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95009 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 95068 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 95069 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 95128 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 95129 gcgaagcggttgagtgccgc 95148
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118726 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 118667 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 118666 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 118607 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 118606 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 118547 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 118546 gcgaagcggttgagtgccgc 118527
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 856 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 797 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 796 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 737 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 736 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 677 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 676 gcgaagcggttgagtgccgc 657
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119810 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 119751 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 119750 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 119691 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 119690 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 119631 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 119630 gcgaagcggttgagtgccgc 119611 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95346 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 95405 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95406 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 95465 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 95466 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 95525 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 95526 gcgaagcggttgagtgccgc 95545
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119810 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 119751 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 119750 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 119691 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 119690 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 119631 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 119630 gcgaagcggttgagtgccgc 119611 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95346 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 95405 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95406 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 95465 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 95466 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 95525 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 95526 gcgaagcggttgagtgccgc 95545
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119759 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 119700 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 119699 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 119640 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 119639 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 119580 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 119579 gcgaagcggttgagtgccgc 119560 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95291 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 95350 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95351 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 95410 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 95411 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 95470 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 95471 gcgaagcggttgagtgccgc 95490
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123343 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 123284 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 123283 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 123224 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 123223 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 123164 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 123163 gcgaagcggttgagtgccgc 123144
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507924 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 31507983 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 31507984 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 31508043 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 31508044 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 31508103 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 31508104 gcgaagcggttgagtgccgc 31508123
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84672 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 84613 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 84612 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 84553 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 84552 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 84493 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 84492 gcgaagcggttgagtgccgc 84473
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119779 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 119720 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 119719 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 119660 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 119659 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 119600 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 119599 gcgaagcggttgagtgccgc 119580 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95339 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 95398 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95399 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 95458 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 95459 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 95518 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 95519 gcgaagcggttgagtgccgc 95538
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122388 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 122447 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122448 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 122507 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 122508 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 122567 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 122568 gcgaagcggttgagtgccgc 122587 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14113 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 14172 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 14173 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 14232 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 14233 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 14292 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 14293 gcgaagcggttgagtgccgc 14312
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140921 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 140980 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 140981 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 141040 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 141041 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 141100 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 141101 gcgaagcggttgagtgccgc 141120
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93517 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 93576 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 93577 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 93636 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 93637 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 93696 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 93697 gcgaagcggttgagtgccgc 93716
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44770 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 44711 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 44710 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 44651 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 44650 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 44591 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 44590 gcgaagcggttgagtgccgc 44571 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20348 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 20407 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 20408 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 20467 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 20468 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 20527 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 20528 gcgaagcggttgagtgccgc 20547
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58498 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 58439 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 58438 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 58379 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 58378 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 58319 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 58318 gcgaagcggttgagtgccgc 58299
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1399 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 1340 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1339 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 1280 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 1279 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 1220 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 1219 gcgaagcggttgagtgccgc 1200
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27581 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 27640 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 27641 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 27700 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 27701 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 27760 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 27761 gcgaagcggttgagtgccgc 27780
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268273 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 9268332 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9268333 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 9268392 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 9268393 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 9268452 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 9268453 gcgaagcggttgagtgccgc 9268472 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227773 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 9227832 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9227833 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 9227892 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 9227893 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 9227952 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 9227953 gcgaagcggttgagtgccgc 9227972 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164362 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 9164421 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9164422 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 9164481 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 9164482 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 9164541 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 9164542 gcgaagcggttgagtgccgc 9164561 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056187 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 9056246 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9056247 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 9056306 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 9056307 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 9056366 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 9056367 gcgaagcggttgagtgccgc 9056386
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938258 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 19938317 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 19938318 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 19938377 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 19938378 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 19938437 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 19938438 gcgaagcggttgagtgccgc 19938457 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387125 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 10387184 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10387185 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 10387244 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 10387245 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 10387304 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 10387305 gcgaagcggttgagtgccgc 10387324 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277173 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 10277114 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10277113 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 10277054 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 10277053 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 10276994 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 10276993 gcgaagcggttgagtgccgc 10276974
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825884 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 12825825 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12825824 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 12825765 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 12825764 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 12825705 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 12825704 gcgaagcggttgagtgccgc 12825685
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598440 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 31598499 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 31598500 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 31598559 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 31598560 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 31598619 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 31598620 gcgaagcggttgagtgccgc 31598639
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525756 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 33525815 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 33525816 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 33525875 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 33525876 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 33525935 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 33525936 gcgaagcggttgagtgccgc 33525955 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 47 gcgaactgaaacatcttagtagc 69 |||||||||||||||| |||||| Sbjct: 33538154 gcgaactgaaacatctgagtagc 33538176 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 47 gcgaactgaaacatcttagtagc 69 |||||||||||||||| |||||| Sbjct: 33499522 gcgaactgaaacatctgagtagc 33499544
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47785 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 47726 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 47725 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 47666 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 47665 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 47606 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 47605 gcgaagcggttgagtgccgc 47586
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70953 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 71012 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 71013 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 71072 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 71073 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 71132 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 71133 gcgaagcggttgagtgccgc 71152 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 47 gcgaactgaaacatcttagtagc 69 |||||||||||||||| |||||| Sbjct: 83351 gcgaactgaaacatctgagtagc 83373 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 47 gcgaactgaaacatcttagtagc 69 |||||||||||||||| |||||| Sbjct: 44719 gcgaactgaaacatctgagtagc 44741
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123609 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 123550 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 123549 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 123490 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 123489 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 123430 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 123429 gcgaagcggttgagtgccgc 123410 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99228 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 99287 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 99288 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 99347 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 99348 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 99407 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 99408 gcgaagcggttgagtgccgc 99427
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 90 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 91 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 150 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 151 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 210 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 211 gcgaagcggttgagtgccgc 230
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 184 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 185 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 244 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 245 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 304 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 305 gcgaagcggttgagtgccgc 324
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 87 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 88 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 147 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 148 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 207 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 208 gcgaagcggttgagtgccgc 227
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 185 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 186 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 245 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 246 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 305 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 306 gcgaagcggttgagtgccgc 325
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 91 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 92 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 151 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 152 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 211 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 212 gcgaagcggttgagtgccgc 231
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 99 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 100 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 159 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 160 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 219 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 220 gcgaagcggttgagtgccgc 239
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 181 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 182 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 241 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 242 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 301 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 302 gcgaagcggttgagtgccgc 321
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949534 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 19949593 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 19949594 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 19949653 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 19949654 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 19949713 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 19949714 gcgaagcggttgagtgccgc 19949733 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393164 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 10393223 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10393224 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 10393283 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 10393284 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 10393343 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 10393344 gcgaagcggttgagtgccgc 10393363 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283212 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 10283153 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10283152 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 10283093 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 10283092 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 10283033 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 10283032 gcgaagcggttgagtgccgc 10283013
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124326 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 124267 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 124266 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 124207 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 124206 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 124147 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 124146 gcgaagcggttgagtgccgc 124127 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99905 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 99964 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 99965 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 100024 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 100025 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 100084 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 100085 gcgaagcggttgagtgccgc 100104
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119753 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 119694 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 119693 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 119634 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 119633 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 119574 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 119573 gcgaagcggttgagtgccgc 119554 Score = 347 bits (175), Expect = 8e-93 Identities = 192/200 (96%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95286 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 95345 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95346 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 95405 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 95406 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 95465 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 95466 gcgaagcggttgagtgccgc 95485
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 343 bits (173), Expect = 1e-91 Identities = 187/194 (96%) Strand = Plus / Plus Query: 7 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 67 agccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcng 126 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 127 cctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaag 186 |||||||||||||||||| ||||||||||||||||||| |||| | |||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 187 cggntgagtgccgc 200 ||| |||||||||| Sbjct: 181 cggttgagtgccgc 194
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 339 bits (171), Expect = 2e-90 Identities = 191/200 (95%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242008 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 9241949 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 9241948 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgg 9241889 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 9241888 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 9241829 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 9241828 gcgaagcggttgagtgccgc 9241809 Score = 67.9 bits (34), Expect = 1e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 51 actgaaacatcttagtagccagaggaaaagaaag 84 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 339 bits (171), Expect = 2e-90 Identities = 191/200 (95%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53221 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 53162 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 53161 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgg 53102 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| Sbjct: 53101 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 53042 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 53041 gcgaagcggttgagtgccgc 53022
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 339 bits (171), Expect = 2e-90 Identities = 191/200 (95%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 141 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 142 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 201 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| |||||||||||||| |||| |||| | |||||||| Sbjct: 202 gagcagcctaaaccgtgaaaacggggttgtgggagagcagtacaagcgttgtgctgctag 261 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 262 gcgaagcggttgagtgccgc 281
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 331 bits (167), Expect = 5e-88 Identities = 190/200 (95%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123548 cttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacat 123489 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 123488 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 123429 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| |||||||| |||||||||| |||| | |||||||| Sbjct: 123428 gagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctag 123369 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 123368 gcgaagcggttgagtgccgc 123349 Score = 331 bits (167), Expect = 5e-88 Identities = 190/200 (95%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99189 cttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacat 99248 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 99249 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 99308 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| |||||||| |||||||||| |||| | |||||||| Sbjct: 99309 gagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctag 99368 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 99369 gcgaagcggttgagtgccgc 99388
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 331 bits (167), Expect = 5e-88 Identities = 190/200 (95%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5542 cttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacat 5601 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5602 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 5661 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| |||||||| |||||||||| |||| | |||||||| Sbjct: 5662 gagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctag 5721 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 5722 gcgaagcggttgagtgccgc 5741
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 331 bits (167), Expect = 5e-88 Identities = 190/200 (95%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 cttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacat 189 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 190 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 249 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctag 180 |||| ||||||||||||||||||| |||||||| |||||||||| |||| | |||||||| Sbjct: 250 gagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctag 309 Query: 181 gcgaagcggntgagtgccgc 200 ||||||||| |||||||||| Sbjct: 310 gcgaagcggttgagtgccgc 329
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 313 bits (158), Expect = 1e-82 Identities = 175/183 (95%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141970 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 141911 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 141910 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 141851 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| || Sbjct: 141850 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttg 141791 Query: 193 agt 195 ||| Sbjct: 141790 agt 141788 Score = 313 bits (158), Expect = 1e-82 Identities = 175/183 (95%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111687 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 111746 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 111747 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 111806 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| || Sbjct: 111807 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttg 111866 Query: 193 agt 195 ||| Sbjct: 111867 agt 111869
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 309 bits (156), Expect = 2e-81 Identities = 176/185 (95%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136453 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 136394 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 136393 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136334 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| | Sbjct: 136333 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgg 136274 Query: 193 agtgc 197 ||||| Sbjct: 136273 agtgc 136269 Score = 309 bits (156), Expect = 2e-81 Identities = 176/185 (95%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105972 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 106031 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106032 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 106091 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| | Sbjct: 106092 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgg 106151 Query: 193 agtgc 197 ||||| Sbjct: 106152 agtgc 106156
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 307 bits (155), Expect = 7e-81 Identities = 170/177 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140222 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 140163 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 140162 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 140103 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcgg 189 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| Sbjct: 140102 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcgg 140046 Score = 307 bits (155), Expect = 7e-81 Identities = 170/177 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109838 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 109897 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 109898 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 109957 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcgg 189 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| Sbjct: 109958 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcgg 110014
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 307 bits (155), Expect = 7e-81 Identities = 170/177 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139448 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 139389 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 139388 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 139329 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcgg 189 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| Sbjct: 139328 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcgg 139272 Score = 307 bits (155), Expect = 7e-81 Identities = 170/177 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110497 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 110556 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 110557 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 110616 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcgg 189 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| Sbjct: 110617 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcgg 110673
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 307 bits (155), Expect = 7e-81 Identities = 170/177 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 194 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 195 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 254 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcgg 189 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| Sbjct: 255 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcgg 311
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 307 bits (155), Expect = 7e-81 Identities = 178/188 (94%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132860 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 132801 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 132800 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 132741 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||||| | |||| | ||||||||||||||||| | Sbjct: 132740 ccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgg 132681 Query: 193 agtgccgc 200 |||||||| Sbjct: 132680 agtgccgc 132673 Score = 307 bits (155), Expect = 7e-81 Identities = 178/188 (94%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103904 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 103963 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 103964 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 104023 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||||| | |||| | ||||||||||||||||| | Sbjct: 104024 ccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgg 104083 Query: 193 agtgccgc 200 |||||||| Sbjct: 104084 agtgccgc 104091
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 307 bits (155), Expect = 7e-81 Identities = 178/188 (94%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130397 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 130338 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 130337 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 130278 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||| ||||| |||| | ||||||||||||||||| | Sbjct: 130277 ccgtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtgg 130218 Query: 193 agtgccgc 200 |||||||| Sbjct: 130217 agtgccgc 130210 Score = 307 bits (155), Expect = 7e-81 Identities = 178/188 (94%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102059 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 102118 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 102119 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 102178 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||| ||||| |||| | ||||||||||||||||| | Sbjct: 102179 ccgtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtgg 102238 Query: 193 agtgccgc 200 |||||||| Sbjct: 102239 agtgccgc 102246
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 172 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 173 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 232 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 233 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 287
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132637 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 132578 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 132577 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 132518 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 132517 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 132463 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104241 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 104300 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 104301 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 104360 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 104361 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 104415
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136162 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 136103 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 136102 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136043 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 136042 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135988 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106468 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 106527 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106528 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 106587 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 106588 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106642
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131529 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 131470 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 131469 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 131410 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 131409 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 131355 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103106 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 103165 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 103166 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 103225 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 103226 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 103280
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106143 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 106202 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106203 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 106262 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 106263 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106317 Score = 289 bits (146), Expect = 2e-75 Identities = 168/176 (95%), Gaps = 1/176 (0%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135766 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 135707 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135706 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 135647 Query: 133 ccgtgaaaacggngttgtgggagagc-aatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||| |||||| |||| | ||||||||||||||| Sbjct: 135646 ccgtgaaaacggggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagc 135591
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134843 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 134784 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 134783 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 134724 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 134723 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 134669 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105439 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 105498 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 105499 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 105558 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 105559 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 105613
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136800 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 136741 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 136740 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136681 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 136680 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 136626 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106757 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 106816 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106817 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 106876 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 106877 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106931
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1662 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 1721 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1722 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 1781 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 1782 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 1836
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135408 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 135349 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135348 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 135289 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 135288 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135234 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105628 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 105687 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 105688 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 105747 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 105748 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 105802
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 419 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 418 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 359 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 358 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 304
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 191
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 303 bits (153), Expect = 1e-79 Identities = 164/169 (97%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 184 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 185 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 244 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgt 169 |||| ||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 245 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 303 bits (153), Expect = 1e-79 Identities = 164/169 (97%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 184 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 185 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 244 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgt 169 |||| ||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 245 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135543 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 135484 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135483 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 135424 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 135423 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135369 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105800 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 105859 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 105860 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 105919 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 105920 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 105974
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135541 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 135482 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135481 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 135422 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 135421 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135367 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105797 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 105856 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 105857 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 105916 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 105917 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 105971
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135453 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 135394 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135393 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 135334 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 135333 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135279 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105675 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 105734 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 105735 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 105794 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 105795 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 105849
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136042 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 135983 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135982 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 135923 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 135922 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135868 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106365 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 106424 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106425 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 106484 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 106485 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106539
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134085 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 134026 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 134025 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 133966 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 133965 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 133911 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103886 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 103945 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 103946 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 104005 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 104006 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 104060
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136160 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 136101 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 136100 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136041 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 136040 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135986 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106466 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 106525 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106526 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 106585 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 106586 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106640
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132630 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 132571 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 132570 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 132511 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 132510 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 132456 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104239 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 104298 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 104299 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 104358 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 104359 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 104413
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135891 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 135832 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135831 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 135772 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 135771 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135717 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106247 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 106306 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106307 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 106366 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 106367 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106421
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139575 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 139516 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 139515 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 139456 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 139455 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 139401 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109724 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 109783 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 109784 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 109843 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 109844 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 109898
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135420 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 135361 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135360 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 135301 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 135300 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135246 Score = 303 bits (153), Expect = 1e-79 Identities = 168/175 (96%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105642 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 105701 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 105702 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 105761 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 105762 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 105816
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 301 bits (152), Expect = 4e-79 Identities = 175/185 (94%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 146 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccag 205 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 206 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 265 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| | Sbjct: 266 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgg 325 Query: 193 agtgc 197 ||||| Sbjct: 326 agtgc 330
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 301 bits (152), Expect = 4e-79 Identities = 175/185 (94%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 146 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccag 205 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 206 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 265 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| | Sbjct: 266 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgg 325 Query: 193 agtgc 197 ||||| Sbjct: 326 agtgc 330
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 301 bits (152), Expect = 4e-79 Identities = 175/185 (94%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 146 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccag 205 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 206 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 265 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| | Sbjct: 266 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgg 325 Query: 193 agtgc 197 ||||| Sbjct: 326 agtgc 330
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 301 bits (152), Expect = 4e-79 Identities = 175/185 (94%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 146 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccag 205 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 206 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 265 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| | Sbjct: 266 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgg 325 Query: 193 agtgc 197 ||||| Sbjct: 326 agtgc 330
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 301 bits (152), Expect = 4e-79 Identities = 175/185 (94%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 146 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccag 205 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 206 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 265 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| | Sbjct: 266 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgg 325 Query: 193 agtgc 197 ||||| Sbjct: 326 agtgc 330
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 299 bits (151), Expect = 2e-78 Identities = 166/173 (95%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131653 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 131594 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 131593 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 131534 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaa 185 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||| Sbjct: 131533 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaa 131481 Score = 299 bits (151), Expect = 2e-78 Identities = 166/173 (95%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101792 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 101851 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 101852 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 101911 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaa 185 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||| Sbjct: 101912 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaa 101964
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 299 bits (151), Expect = 2e-78 Identities = 177/188 (94%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 196 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 197 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 256 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||| | | |||| | ||||||||||||||||| | Sbjct: 257 ccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtgg 316 Query: 193 agtgccgc 200 |||||||| Sbjct: 317 agtgccgc 324
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 299 bits (151), Expect = 2e-78 Identities = 166/173 (95%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 205 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 206 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 265 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaa 185 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||| Sbjct: 266 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaa 318
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 299 bits (151), Expect = 2e-78 Identities = 166/173 (95%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 205 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 206 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 265 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaa 185 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||| Sbjct: 266 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaa 318
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 299 bits (151), Expect = 2e-78 Identities = 166/173 (95%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 693 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 694 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 753 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaa 185 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||| Sbjct: 754 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaa 806
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 299 bits (151), Expect = 2e-78 Identities = 177/188 (94%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133821 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 133762 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 133761 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 133702 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||| | | |||| | ||||||||||||||||| | Sbjct: 133701 ccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtgg 133642 Query: 193 agtgccgc 200 |||||||| Sbjct: 133641 agtgccgc 133634 Score = 299 bits (151), Expect = 2e-78 Identities = 177/188 (94%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104828 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 104887 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 104888 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 104947 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||| | | |||| | ||||||||||||||||| | Sbjct: 104948 ccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtgg 105007 Query: 193 agtgccgc 200 |||||||| Sbjct: 105008 agtgccgc 105015
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 295 bits (149), Expect = 3e-77 Identities = 167/175 (95%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 321 ctgctgaatccatgggcaggcaggagacaacctggcgaactgaaacatcttagtagccag 262 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 261 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 202 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 201 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 147
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 295 bits (149), Expect = 3e-77 Identities = 167/175 (95%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 146 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccag 205 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 206 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 265 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 266 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 320
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 295 bits (149), Expect = 3e-77 Identities = 167/175 (95%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4638 ctgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 4697 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4698 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 4757 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 4758 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 4812
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 295 bits (149), Expect = 3e-77 Identities = 167/175 (95%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4638 ctgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 4697 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4698 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 4757 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 4758 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 4812
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 293 bits (148), Expect = 1e-76 Identities = 174/185 (94%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127726 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 127667 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 127666 aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaa 127607 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| | Sbjct: 127606 ccgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtgg 127547 Query: 193 agtgc 197 ||||| Sbjct: 127546 agtgc 127542 Score = 293 bits (148), Expect = 1e-76 Identities = 174/185 (94%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107196 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 107255 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 107256 aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaa 107315 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| | Sbjct: 107316 ccgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtgg 107375 Query: 193 agtgc 197 ||||| Sbjct: 107376 agtgc 107380
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 291 bits (147), Expect = 4e-76 Identities = 168/177 (94%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 46390 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccag 46449 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||| Sbjct: 46450 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaa 46509 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcgg 189 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| Sbjct: 46510 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcgg 46566
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 291 bits (147), Expect = 4e-76 Identities = 168/177 (94%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 115 ctgccgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccag 174 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 175 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 234 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcgg 189 |||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| Sbjct: 235 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcgg 291
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 287 bits (145), Expect = 6e-75 Identities = 166/175 (94%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142741 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 142682 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 142681 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 142622 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| |||||||||||| ||||| |||| | ||||||||||||||| Sbjct: 142621 ccgtgaaaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagc 142567 Score = 287 bits (145), Expect = 6e-75 Identities = 166/175 (94%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110587 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 110646 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 110647 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 110706 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| |||||||||||| ||||| |||| | ||||||||||||||| Sbjct: 110707 ccgtgaaaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagc 110761
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 283 bits (143), Expect = 1e-73 Identities = 167/177 (94%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 139366 ctgctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccgg 139307 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 139306 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 139247 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcgg 189 |||||||||||| ||||||||||||||||| | |||| | ||||||||||||||||| Sbjct: 139246 ccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcgg 139190 Score = 283 bits (143), Expect = 1e-73 Identities = 167/177 (94%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 109731 ctgctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccgg 109790 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 109791 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 109850 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcgg 189 |||||||||||| ||||||||||||||||| | |||| | ||||||||||||||||| Sbjct: 109851 ccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcgg 109907
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 283 bits (143), Expect = 1e-73 Identities = 167/177 (94%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 187 ctgctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccgg 246 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 247 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 306 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcgg 189 |||||||||||| ||||||||||||||||| | |||| | ||||||||||||||||| Sbjct: 307 ccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcgg 363
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 280 bits (141), Expect = 2e-72 Identities = 165/175 (94%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4369 ctgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 4428 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||| Sbjct: 4429 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaa 4488 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | | ||||||||||||| Sbjct: 4489 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagc 4543
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 280 bits (141), Expect = 2e-72 Identities = 165/175 (94%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23556 ctgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 23497 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||| Sbjct: 23496 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaa 23437 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | | ||||||||||||| Sbjct: 23436 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagc 23382
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 278 bits (140), Expect = 6e-72 Identities = 167/175 (95%), Gaps = 2/175 (1%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt-agcca 71 |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 238 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtgagcca 297 Query: 72 gaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaa 131 |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 298 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 357 Query: 132 accgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaag 186 ||||||||||||| ||||||||||||||||||| |||| | |||||||||||||| Sbjct: 358 accgtgaaaacgg-gttgtgggagagcaatacaagcgtcgtgctgctaggcgaag 411
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 278 bits (140), Expect = 6e-72 Identities = 168/178 (94%), Gaps = 1/178 (0%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138 ctgctgaatccatgggcaggcaagagacaacctaacgaactgaaacatcttagtagccag 197 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagc-ggcgagcgaaatgggagcngcctaa 131 ||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| Sbjct: 198 aggaaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagcctaa 257 Query: 132 accgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcgg 189 ||||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| Sbjct: 258 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcgg 315
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 272 bits (137), Expect = 4e-70 Identities = 164/175 (93%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 131732 ctgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccag 131673 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 131672 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 131613 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||| ||||| | || | ||||||||||||||| Sbjct: 131612 ccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagc 131558 Score = 272 bits (137), Expect = 4e-70 Identities = 164/175 (93%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 103662 ctgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccag 103721 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 103722 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 103781 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||| ||||| | || | ||||||||||||||| Sbjct: 103782 ccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagc 103836
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 268 bits (135), Expect = 6e-69 Identities = 173/188 (92%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 ctgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 198 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 199 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaa 258 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||||| | | || | | ||||||||||||||| || Sbjct: 259 ccgtgaaaacggggttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttg 318 Query: 193 agtgccgc 200 ||| |||| Sbjct: 319 agtcccgc 326
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 264 bits (133), Expect = 9e-68 Identities = 163/175 (93%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||||| Sbjct: 177169 ctgctgaatccatgggcaggcaagagagaaccaggcgaactgaaagatcttagtagccag 177228 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 177229 aggaaaagaaagcaaaagcgattcccgtagtagcggcgggcgaaatgggagctgcctaaa 177288 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||||||||| |||| | || |||||||||||| Sbjct: 177289 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgcagctaggcgaagc 177343 Score = 46.1 bits (23), Expect = 0.041 Identities = 23/23 (100%) Strand = Plus / Plus Query: 47 gcgaactgaaacatcttagtagc 69 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.041 Identities = 23/23 (100%) Strand = Plus / Plus Query: 47 gcgaactgaaacatcttagtagc 69 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 264 bits (133), Expect = 9e-68 Identities = 163/175 (93%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||| | |||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 2738 ctgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccag 2797 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2798 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 2857 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||| ||||| | || | ||||||||||||||| Sbjct: 2858 ccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagc 2912
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 264 bits (133), Expect = 9e-68 Identities = 163/175 (93%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||| | |||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 993 ctgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccag 1052 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1053 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 1112 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||| ||||||||||||| ||||| | || | ||||||||||||||| Sbjct: 1113 ccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagc 1167
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 260 bits (131), Expect = 1e-66 Identities = 166/177 (93%), Gaps = 2/177 (1%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1904 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaccatcttagtagccag 1963 Query: 73 aggaaaagaaagcaaaan-cgattcccgtagtagcggcgagcgaaatgggagcngcctaa 131 ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 1964 aggaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 2023 Query: 132 accgtgaaaacggngttgtgggagagcaatacangc-gtngngctgctaggcgaagc 187 ||||||||||||| ||||||||||||||||||| || | | ||||||||||||||| Sbjct: 2024 accgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagc 2080
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 256 bits (129), Expect = 2e-65 Identities = 170/185 (91%), Gaps = 2/185 (1%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86400 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 86459 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||| ||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 86460 aggaatagaaagcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaaa 86519 Query: 133 ccgtgaaaacggngttgtgggagagc--aatacangcgtngngctgctaggcgaagcggn 190 |||||||||||| ||||||||||||| |||| | || | ||||||||||||||||| Sbjct: 86520 ccgtgaaaacggggttgtgggagagcccaatataagctctgtgctgctaggcgaagcggt 86579 Query: 191 tgagt 195 ||||| Sbjct: 86580 tgagt 86584
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 256 bits (129), Expect = 2e-65 Identities = 170/185 (91%), Gaps = 2/185 (1%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 88486 ctgctgaatccatgggcaggcaagagacaacctggtgaactgaaacatcttagtagccag 88545 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 88546 aggaatagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 88605 Query: 133 ccgtgaaaacggngttgtgggagagca--atacangcgtngngctgctaggcgaagcggn 190 |||||||||||| |||||||||||||| ||| | || | ||||||||||||||||| Sbjct: 88606 ccgtgaaaacggggttgtgggagagcacaatataagctctgtgctgctaggcgaagcggt 88665 Query: 191 tgagt 195 ||||| Sbjct: 88666 tgagt 88670
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 252 bits (127), Expect = 4e-64 Identities = 160/173 (92%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 52548 ctgctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccag 52489 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 52488 aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaa 52429 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaa 185 ||| |||||||| ||||||||||||||||| | | || | ||||||||||||| Sbjct: 52428 ccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaa 52376 Score = 252 bits (127), Expect = 4e-64 Identities = 160/173 (92%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 37280 ctgctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccag 37339 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 37340 aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaa 37399 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaa 185 ||| |||||||| ||||||||||||||||| | | || | ||||||||||||| Sbjct: 37400 ccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaa 37452
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 252 bits (127), Expect = 4e-64 Identities = 160/173 (92%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 4208 ctgctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccag 4267 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 4268 aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaa 4327 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaa 185 ||| |||||||| ||||||||||||||||| | | || | ||||||||||||| Sbjct: 4328 ccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaa 4380
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 250 bits (126), Expect = 1e-63 Identities = 167/183 (91%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 ||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 146421 ctgctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccag 146362 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 146361 aggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaa 146302 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||||| | |||| ||||||||||||||| | || Sbjct: 146301 ccgtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttg 146242 Query: 193 agt 195 ||| Sbjct: 146241 agt 146239 Score = 250 bits (126), Expect = 1e-63 Identities = 167/183 (91%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 ||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 112041 ctgctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccag 112100 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 112101 aggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaa 112160 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| ||||||||||||||||| | |||| ||||||||||||||| | || Sbjct: 112161 ccgtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttg 112220 Query: 193 agt 195 ||| Sbjct: 112221 agt 112223
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 248 bits (125), Expect = 6e-63 Identities = 161/175 (92%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 138 ctgctcaatccatgggcaggaaagagacaacctggcgaactgaaacatcttagtagccag 197 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||| ||||||||| |||||||| ||||||||||||||||||||||| | ||||||| Sbjct: 198 aggaaaataaagcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaa 257 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagc 187 ||| |||||||| ||||||||||||||||| | |||| | ||||||||||||||| Sbjct: 258 ccgcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagc 312
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 236 bits (119), Expect = 2e-59 Identities = 151/164 (92%) Strand = Plus / Plus Query: 32 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaanc 91 |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 4047 gcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagc 4106 Query: 92 gattcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacggngttgtg 151 |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 4107 gattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtg 4166 Query: 152 ggagagcaatacangcgtngngctgctaggcgaagcggntgagt 195 ||||||||||| | |||| | ||||||||| ||||| | ||||| Sbjct: 4167 ggagagcaatataagcgttgtgctgctaggtgaagcagttgagt 4210
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 236 bits (119), Expect = 2e-59 Identities = 151/164 (92%) Strand = Plus / Plus Query: 32 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaanc 91 |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 157 gcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagc 216 Query: 92 gattcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacggngttgtg 151 |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 217 gattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtg 276 Query: 152 ggagagcaatacangcgtngngctgctaggcgaagcggntgagt 195 ||||||||||| | |||| | ||||||||| ||||| | ||||| Sbjct: 277 ggagagcaatataagcgttgtgctgctaggtgaagcagttgagt 320
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 236 bits (119), Expect = 2e-59 Identities = 134/140 (95%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79632 ctgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 79573 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||| Sbjct: 79572 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaa 79513 Query: 133 ccgtgaaaacggngttgtgg 152 |||||||||||| ||||||| Sbjct: 79512 ccgtgaaaacggggttgtgg 79493
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 236 bits (119), Expect = 2e-59 Identities = 151/164 (92%) Strand = Plus / Minus Query: 32 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaanc 91 |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 151088 gcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagc 151029 Query: 92 gattcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacggngttgtg 151 |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 151028 gattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtg 150969 Query: 152 ggagagcaatacangcgtngngctgctaggcgaagcggntgagt 195 ||||||||||| | |||| | ||||||||| ||||| | ||||| Sbjct: 150968 ggagagcaatataagcgttgtgctgctaggtgaagcagttgagt 150925 Score = 236 bits (119), Expect = 2e-59 Identities = 151/164 (92%) Strand = Plus / Plus Query: 32 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaanc 91 |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 117578 gcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagc 117637 Query: 92 gattcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacggngttgtg 151 |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 117638 gattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtg 117697 Query: 152 ggagagcaatacangcgtngngctgctaggcgaagcggntgagt 195 ||||||||||| | |||| | ||||||||| ||||| | ||||| Sbjct: 117698 ggagagcaatataagcgttgtgctgctaggtgaagcagttgagt 117741
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 236 bits (119), Expect = 2e-59 Identities = 151/164 (92%) Strand = Plus / Plus Query: 32 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaanc 91 |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 157 gcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagc 216 Query: 92 gattcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacggngttgtg 151 |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 217 gattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtg 276 Query: 152 ggagagcaatacangcgtngngctgctaggcgaagcggntgagt 195 ||||||||||| | |||| | ||||||||| ||||| | ||||| Sbjct: 277 ggagagcaatataagcgttgtgctgctaggtgaagcagttgagt 320
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 228 bits (115), Expect = 5e-57 Identities = 139/148 (93%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2182 ctgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 2241 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||| Sbjct: 2242 aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaa 2301 Query: 133 ccgtgaaaacggngttgtgggagagcaa 160 |||||||||||| ||||||||||||||| Sbjct: 2302 ccgtgaaaacggggttgtgggagagcaa 2329
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 228 bits (115), Expect = 5e-57 Identities = 139/148 (93%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118011 ctgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 117952 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||| Sbjct: 117951 aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaa 117892 Query: 133 ccgtgaaaacggngttgtgggagagcaa 160 |||||||||||| ||||||||||||||| Sbjct: 117891 ccgtgaaaacggggttgtgggagagcaa 117864 Score = 228 bits (115), Expect = 5e-57 Identities = 139/148 (93%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90091 ctgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 90150 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||| Sbjct: 90151 aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaa 90210 Query: 133 ccgtgaaaacggngttgtgggagagcaa 160 |||||||||||| ||||||||||||||| Sbjct: 90211 ccgtgaaaacggggttgtgggagagcaa 90238
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 220 bits (111), Expect = 1e-54 Identities = 151/164 (92%), Gaps = 1/164 (0%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 |||||||||||| |||||||| ||| || |||||||||||||| ||||||||||||||| Sbjct: 128 cttttaaactgc-tgctgaattcataggcgggcaagagacaacccggcgaactgaaacat 186 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 |||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 187 cttagtagccggaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgg 246 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagcaataca 164 |||| ||||||||||||||||||| |||||||| |||| ||||| Sbjct: 247 gagcggcctaaaccgtgaaaacggggttgtgggggagctataca 290
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 220 bits (111), Expect = 1e-54 Identities = 138/148 (93%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 ||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 139 ctgctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccag 198 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||| Sbjct: 199 aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaa 258 Query: 133 ccgtgaaaacggngttgtgggagagcaa 160 |||||||||||| |||||||| |||||| Sbjct: 259 ccgtgaaaacggggttgtgggggagcaa 286
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 218 bits (110), Expect = 5e-54 Identities = 171/194 (88%), Gaps = 6/194 (3%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128308 ctgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 128249 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 |||||| ||||||||| |||||||||||||||||||||||||| |||||| ||||||| Sbjct: 128248 aggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaa 128189 Query: 133 ccgtgaaaacggngttgtgggagagc------aatacangcgtngngctgctaggcgaag 186 |||||||||||| |||||||| |||| |||||| || | | |||||||||||||| Sbjct: 128188 ccgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaag 128129 Query: 187 cggntgagtgccgc 200 ||| ||||| |||| Sbjct: 128128 cggttgagtcccgc 128115 Score = 218 bits (110), Expect = 5e-54 Identities = 171/194 (88%), Gaps = 6/194 (3%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95139 ctgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 95198 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 |||||| ||||||||| |||||||||||||||||||||||||| |||||| ||||||| Sbjct: 95199 aggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaa 95258 Query: 133 ccgtgaaaacggngttgtgggagagc------aatacangcgtngngctgctaggcgaag 186 |||||||||||| |||||||| |||| |||||| || | | |||||||||||||| Sbjct: 95259 ccgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaag 95318 Query: 187 cggntgagtgccgc 200 ||| ||||| |||| Sbjct: 95319 cggttgagtcccgc 95332
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 216 bits (109), Expect = 2e-53 Identities = 146/158 (92%), Gaps = 1/158 (0%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 |||||||||||| |||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 111 cttttaaactgc-tgctgaatccataggcgggcaagagacaacctggcgaactgaaacat 169 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgg 120 |||||||||| |||||| ||||||||||| |||||| |||||||||||||||||||| || Sbjct: 170 cttagtagccggaggaagagaaagcaaaagcgattctcgtagtagcggcgagcgaaacgg 229 Query: 121 gagcngcctaaaccgtgaaaacggngttgtgggagagc 158 |||| ||||||||||||||||||| |||||||| |||| Sbjct: 230 gagcagcctaaaccgtgaaaacggggttgtgggggagc 267
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 210 bits (106), Expect = 1e-51 Identities = 133/143 (93%), Gaps = 1/143 (0%) Strand = Plus / Minus Query: 56 aacatcttagtagccagaggaaaagaaag-caaaancgattcccgtagtagcggcgagcg 114 ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 564 aacatcttagtagccagaggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcg 505 Query: 115 aaatgggagcngcctaaaccgtgaaaacggngttgtgggagagcaatacangcgtngngc 174 |||||||||| ||||||||||||||||||| ||||||||||||| ||||| |||| | || Sbjct: 504 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcgatacaagcgtcgtgc 445 Query: 175 tgctaggcgaagcggntgagtgc 197 ||||||||||||||| |||||| Sbjct: 444 tgctaggcgaagcggtggagtgc 422
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 208 bits (105), Expect = 5e-51 Identities = 163/183 (89%), Gaps = 1/183 (0%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 ||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 116071 ctgctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccag 116012 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||| ||||||||||||||||||||||||| | ||||||| Sbjct: 116011 aggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaa 115952 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| |||||||| |||| | | | | || | | ||||||||||||| | || Sbjct: 115951 ccgtgaaaacgg-gttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttg 115893 Query: 193 agt 195 ||| Sbjct: 115892 agt 115890 Score = 208 bits (105), Expect = 5e-51 Identities = 163/183 (89%), Gaps = 1/183 (0%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 ||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 86049 ctgctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccag 86108 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||||| ||||||||||||||||||||||||| | ||||||| Sbjct: 86109 aggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaa 86168 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntg 192 |||||||||||| |||||||| |||| | | | | || | | ||||||||||||| | || Sbjct: 86169 ccgtgaaaacgg-gttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttg 86227 Query: 193 agt 195 ||| Sbjct: 86228 agt 86230
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 204 bits (103), Expect = 7e-50 Identities = 157/177 (88%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 3676 ctgctgaatccatgggcaggcaagagacaacctggcaaactgaaatatcttagtagccag 3617 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| ||||||||||||| || |||| ||||||||||| ||||||| Sbjct: 3616 aggaaaagaaagcaaaagtgattcccgtagtaacgacgagtgaaatgggagcagcctaaa 3557 Query: 133 ccgtgaaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcgg 189 |||| |||| | |||||||||||||||| || ||| | || ||||||| |||||| Sbjct: 3556 ccgtaaaaatgaggttgtgggagagcaatgcaaacgtagtgccgctaggcaaagcgg 3500
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 198 bits (100), Expect = 5e-48 Identities = 114/121 (94%) Strand = Plus / Plus Query: 80 gaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaa 139 |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 140 aacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntgagtgccg 199 ||||| ||||||||||||||||||| |||| | ||||||||||||||||| ||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 200 c 200 | Sbjct: 121 c 121
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 198 bits (100), Expect = 5e-48 Identities = 105/107 (98%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75893 cttttaaactgcctgcggaatccatgagcaggcaagagacaacctggcgaactgaaacat 75952 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcg 107 ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 75953 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 75999 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ggcgaactgaaacatcttag 65 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 47 gcgaactgaaacatcttagtagc 69 |||||||||||||||| |||||| Sbjct: 374530 gcgaactgaaacatctgagtagc 374508 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 47 gcgaactgaaacatcttagtagc 69 |||||||||||||||| |||||| Sbjct: 262792 gcgaactgaaacatctgagtagc 262770 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 47 gcgaactgaaacatcttagtagc 69 |||||||||||||||| |||||| Sbjct: 170895 gcgaactgaaacatctgagtagc 170873
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 194 bits (98), Expect = 7e-47 Identities = 112/119 (94%) Strand = Plus / Plus Query: 82 aagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaa 141 |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 142 cggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntgagtgccgc 200 ||| ||||||||||||||||||| |||| | ||||||||||||||||| |||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 119
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 194 bits (98), Expect = 7e-47 Identities = 112/119 (94%) Strand = Plus / Plus Query: 82 aagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaa 141 |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 142 cggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntgagtgccgc 200 ||| ||||||||||||||||||| |||| | ||||||||||||||||| |||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 119
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 192 bits (97), Expect = 3e-46 Identities = 111/118 (94%) Strand = Plus / Plus Query: 83 agcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaac 142 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 143 ggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntgagtgccgc 200 || ||||||||||||||||||| |||| | ||||||||||||||||| |||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 118
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 192 bits (97), Expect = 3e-46 Identities = 111/118 (94%) Strand = Plus / Plus Query: 83 agcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaac 142 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 143 ggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntgagtgccgc 200 || ||||||||||||||||||| |||| | ||||||||||||||||| |||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 121
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 188 bits (95), Expect = 4e-45 Identities = 109/116 (93%) Strand = Plus / Plus Query: 85 caaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacgg 144 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 145 ngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntgagtgccgc 200 ||||||||||||||||||| |||| | ||||||||||||||||| |||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 116
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 186 bits (94), Expect = 2e-44 Identities = 99/101 (98%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75585 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 75526 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgta 101 ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 75525 cttagtagccagaggaaaagaaagcaaaagcgattcccgta 75485 Score = 170 bits (86), Expect = 1e-39 Identities = 98/104 (94%) Strand = Plus / Minus Query: 97 ccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacggngttgtgggaga 156 |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 157 gcaatacangcgtngngctgctaggcgaagcggntgagtgccgc 200 |||||||| |||| | ||||||||||||||||| |||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 75375 Score = 71.9 bits (36), Expect = 7e-10 Identities = 39/40 (97%) Strand = Plus / Minus Query: 28 gcaggcaagagacaacctggcgaactgaaacatcttagta 67 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 47 gcgaactgaaacatcttagtagc 69 |||||||||||||||| |||||| Sbjct: 400393 gcgaactgaaacatctgagtagc 400415
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 186 bits (94), Expect = 2e-44 Identities = 99/101 (98%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381953 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 382012 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgta 101 ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 382013 cttagtagccagaggaaaagaaagcaaaagcgattcccgta 382053 Score = 170 bits (86), Expect = 1e-39 Identities = 98/104 (94%) Strand = Plus / Plus Query: 97 ccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacggngttgtgggaga 156 |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 157 gcaatacangcgtngngctgctaggcgaagcggntgagtgccgc 200 |||||||| |||| | ||||||||||||||||| |||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 382163 Score = 71.9 bits (36), Expect = 7e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 28 gcaggcaagagacaacctggcgaactgaaacatcttagta 67 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 7e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 28 gcaggcaagagacaacctggcgaactgaaacatcttagta 67 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 47 gcgaactgaaacatcttagtagc 69 |||||||||||||||| |||||| Sbjct: 284026 gcgaactgaaacatctgagtagc 284004 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 47 gcgaactgaaacatcttagtagc 69 |||||||||||||||| |||||| Sbjct: 155334 gcgaactgaaacatctgagtagc 155312
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 186 bits (94), Expect = 2e-44 Identities = 99/101 (98%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113676 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 113617 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgta 101 ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 113616 cttagtagccagaggaaaagaaagcaaaagcgattcccgta 113576 Score = 170 bits (86), Expect = 1e-39 Identities = 98/104 (94%) Strand = Plus / Minus Query: 97 ccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacggngttgtgggaga 156 |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 157 gcaatacangcgtngngctgctaggcgaagcggntgagtgccgc 200 |||||||| |||| | ||||||||||||||||| |||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 113466 Score = 71.9 bits (36), Expect = 7e-10 Identities = 39/40 (97%) Strand = Plus / Minus Query: 28 gcaggcaagagacaacctggcgaactgaaacatcttagta 67 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 47 gcgaactgaaacatcttagtagc 69 |||||||||||||||| |||||| Sbjct: 293027 gcgaactgaaacatctgagtagc 293049
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 186 bits (94), Expect = 2e-44 Identities = 99/101 (98%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368358 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 368299 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgta 101 ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 368298 cttagtagccagaggaaaagaaagcaaaagcgattcccgta 368258 Score = 186 bits (94), Expect = 2e-44 Identities = 99/101 (98%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184963 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 184904 Query: 61 cttagtagccagaggaaaagaaagcaaaancgattcccgta 101 ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 184903 cttagtagccagaggaaaagaaagcaaaagcgattcccgta 184863 Score = 170 bits (86), Expect = 1e-39 Identities = 98/104 (94%) Strand = Plus / Minus Query: 97 ccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacggngttgtgggaga 156 |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 157 gcaatacangcgtngngctgctaggcgaagcggntgagtgccgc 200 |||||||| |||| | ||||||||||||||||| |||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 368148 Score = 170 bits (86), Expect = 1e-39 Identities = 98/104 (94%) Strand = Plus / Minus Query: 97 ccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacggngttgtgggaga 156 |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 157 gcaatacangcgtngngctgctaggcgaagcggntgagtgccgc 200 |||||||| |||| | ||||||||||||||||| |||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 184753 Score = 71.9 bits (36), Expect = 7e-10 Identities = 39/40 (97%) Strand = Plus / Minus Query: 28 gcaggcaagagacaacctggcgaactgaaacatcttagta 67 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 47 gcgaactgaaacatcttagtagc 69 |||||||||||||||| |||||| Sbjct: 265862 gcgaactgaaacatctgagtagc 265884
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 182 bits (92), Expect = 3e-43 Identities = 131/145 (90%) Strand = Plus / Plus Query: 14 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 73 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 141 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 200 Query: 74 ggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaac 133 |||||||||||||||| |||||||| ||||||||||||||||| |||| | |||||||| Sbjct: 201 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 260 Query: 134 cgtgaaaacggngttgtgggagagc 158 || |||| ||| ||||||||||||| Sbjct: 261 cgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 182 bits (92), Expect = 3e-43 Identities = 131/145 (90%) Strand = Plus / Minus Query: 14 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 73 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 125124 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 125065 Query: 74 ggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaac 133 |||||||||||||||| |||||||| ||||||||||||||||| |||| | |||||||| Sbjct: 125064 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 125005 Query: 134 cgtgaaaacggngttgtgggagagc 158 || |||| ||| ||||||||||||| Sbjct: 125004 cgcgaaagcggggttgtgggagagc 124980 Score = 182 bits (92), Expect = 3e-43 Identities = 131/145 (90%) Strand = Plus / Plus Query: 14 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 73 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 94742 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 94801 Query: 74 ggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaac 133 |||||||||||||||| |||||||| ||||||||||||||||| |||| | |||||||| Sbjct: 94802 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 94861 Query: 134 cgtgaaaacggngttgtgggagagc 158 || |||| ||| ||||||||||||| Sbjct: 94862 cgcgaaagcggggttgtgggagagc 94886
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 178 bits (90), Expect = 4e-42 Identities = 115/124 (92%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||| ||| | |||||||| ||||||||||||||||||| |||| Sbjct: 6438 ctgctgaatccatgggcaggtaaggggcaacctggtgaactgaaacatcttagtaaccag 6379 Query: 73 aggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 6378 aggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 6319 Query: 133 ccgt 136 |||| Sbjct: 6318 ccgt 6315 Score = 46.1 bits (23), Expect = 0.041 Identities = 48/58 (82%) Strand = Plus / Minus Query: 138 aaaacggngttgtgggagagcaatacangcgtngngctgctaggcgaagcggntgagt 195 ||||||| ||||||||||||||||| | |||| | | |||||| ||||| | ||||| Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagt 6227
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 172 bits (87), Expect = 3e-40 Identities = 118/129 (91%) Strand = Plus / Plus Query: 8 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 67 |||||||||||||| || | |||||||||||||||||||||||||||||||||||||| Sbjct: 122 actgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagta 181 Query: 68 gccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngc 127 |||||||||||||||||||||| |||||||| ||||| |||||||||||||||| | || Sbjct: 182 gccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagc 241 Query: 128 ctaaaccgt 136 ||||||||| Sbjct: 242 ctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 172 bits (87), Expect = 3e-40 Identities = 118/129 (91%) Strand = Plus / Plus Query: 8 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 67 |||||||||||||| || | |||||||||||||||||||||||||||||||||||||| Sbjct: 135 actgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagta 194 Query: 68 gccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngc 127 |||||||||||||||||||||| |||||||| ||||| |||||||||||||||| | || Sbjct: 195 gccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagc 254 Query: 128 ctaaaccgt 136 ||||||||| Sbjct: 255 ctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 170 bits (86), Expect = 1e-39 Identities = 117/128 (91%) Strand = Plus / Plus Query: 8 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 67 |||||||||||||| || | |||||||||||||||||||||||||||||||||||||| Sbjct: 239 actgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagta 298 Query: 68 gccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngc 127 |||||||||||||||||||||| |||||||| ||||| |||||||||||||||| | || Sbjct: 299 gccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagc 358 Query: 128 ctaaaccg 135 |||||||| Sbjct: 359 ctaaaccg 366
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 157 bits (79), Expect = 2e-35 Identities = 133/152 (87%) Strand = Plus / Plus Query: 6 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 65 |||||||||||||||| || ||||| |||||||||||| |||||||||||||||||||| Sbjct: 144051 aaactgcctgctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttag 144110 Query: 66 tagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcn 125 ||||| ||||| | ||||||||| |||||||| ||||| ||||||| |||| |||| Sbjct: 144111 tagccggaggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaaga 144170 Query: 126 gcctaaaccgtgaaaacggngttgtgggagag 157 |||||||||||||| |||| |||||||||||| Sbjct: 144171 gcctaaaccgtgaagacggggttgtgggagag 144202 Score = 157 bits (79), Expect = 2e-35 Identities = 133/152 (87%) Strand = Plus / Minus Query: 6 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 65 |||||||||||||||| || ||||| |||||||||||| |||||||||||||||||||| Sbjct: 88800 aaactgcctgctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttag 88741 Query: 66 tagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcn 125 ||||| ||||| | ||||||||| |||||||| ||||| ||||||| |||| |||| Sbjct: 88740 tagccggaggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaaga 88681 Query: 126 gcctaaaccgtgaaaacggngttgtgggagag 157 |||||||||||||| |||| |||||||||||| Sbjct: 88680 gcctaaaccgtgaagacggggttgtgggagag 88649
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 155 bits (78), Expect = 6e-35 Identities = 91/97 (93%) Strand = Plus / Plus Query: 91 cgattcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacggngttgt 150 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| Sbjct: 2 cgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttgt 61 Query: 151 gggagagcaatacangcgtngngctgctaggcgaagc 187 |||||||||||||| |||| | ||||||||||||||| Sbjct: 62 gggagagcaatacaagcgtcgtgctgctaggcgaagc 98
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 147 bits (74), Expect = 2e-32 Identities = 93/100 (93%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 116 agagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 175 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaacc 134 |||| ||||| |||||||||||||||| | ||||||||| Sbjct: 176 tccctcagtagtggcgagcgaaatgggaacagcctaaacc 215
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 147 bits (74), Expect = 2e-32 Identities = 82/85 (96%) Strand = Plus / Plus Query: 32 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaanc 91 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 92 gattcccgtagtagcggcgagcgaa 116 ||||||| ||||||||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaa 231
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 143 bits (72), Expect = 2e-31 Identities = 88/94 (93%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 ||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||| | Sbjct: 1911 aacctggcgaactgaaacatcttagtaaccagaggaaaataaagcaaaagcgattccctt 1970 Query: 101 agtagcggcgagcgaaatgggagcngcctaaacc 134 |||||||||||||||||||||| | ||||||||| Sbjct: 1971 agtagcggcgagcgaaatgggaacagcctaaacc 2004
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 139 bits (70), Expect = 4e-30 Identities = 116/132 (87%) Strand = Plus / Plus Query: 5 taaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctta 64 |||||||| |||||||| ||| || | |||||||||||||| |||||||||||||||| Sbjct: 532 taaactgcttgctgaattcataggcgagtaagagacaacctggtgaactgaaacatctta 591 Query: 65 gtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagc 124 ||| ||||||||| ||||||||||| |||||||| |||||| ||||||||||| |||| | Sbjct: 592 gtaaccagaggaacagaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaac 651 Query: 125 ngcctaaaccgt 136 ||||||||||| Sbjct: 652 agcctaaaccgt 663
>gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 4173 Score = 139 bits (70), Expect = 4e-30 Identities = 92/100 (92%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 ||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 147 agagaaaacctggtgaactgaaacatctcagtagccagaggaaaagaaagcaaaagcgat 206 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaacc 134 ||||||||||||||||||||||| ||| | ||||||||| Sbjct: 207 tcccgtagtagcggcgagcgaaacggggccagcctaaacc 246
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 139 bits (70), Expect = 4e-30 Identities = 92/100 (92%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 149 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 208 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaacc 134 |||| |||||||||||||||||| |||| | | ||||||| Sbjct: 209 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 139 bits (70), Expect = 4e-30 Identities = 92/100 (92%) Strand = Plus / Minus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 115514 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 115455 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaacc 134 |||| |||||||||||||||||| |||| | | ||||||| Sbjct: 115454 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 139 bits (70), Expect = 4e-30 Identities = 92/100 (92%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 86474 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 86533 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaacc 134 |||| |||||||||||||||||| |||| | | ||||||| Sbjct: 86534 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 137 bits (69), Expect = 1e-29 Identities = 91/99 (91%) Strand = Plus / Plus Query: 34 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancga 93 |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 161 aagagacaacctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcga 220 Query: 94 ttcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 || || ||||||||||||||||||||||| ||||||| Sbjct: 221 tttcctgagtagcggcgagcgaaatgggagaagcctaaa 259
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 137 bits (69), Expect = 1e-29 Identities = 108/122 (88%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 ||||| ||||| | ||||||||||||||||||||| ||||||| | ||||||||| |||| Sbjct: 162 agagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgat 221 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacggngttgtggga 154 |||| |||||| ||||||||||| |||| | ||||||||||||||| ||| ||||||||| Sbjct: 222 tcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtggga 281 Query: 155 ga 156 || Sbjct: 282 ga 283
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 137 bits (69), Expect = 1e-29 Identities = 108/122 (88%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 ||||| ||||| | ||||||||||||||||||||| ||||||| | ||||||||| |||| Sbjct: 3196 agagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgat 3255 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacggngttgtggga 154 |||| |||||| ||||||||||| |||| | ||||||||||||||| ||| ||||||||| Sbjct: 3256 tcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtggga 3315 Query: 155 ga 156 || Sbjct: 3316 ga 3317
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 137 bits (69), Expect = 1e-29 Identities = 91/99 (91%) Strand = Plus / Plus Query: 34 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancga 93 |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 4193 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcga 4252 Query: 94 ttcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||| ||||||||||||||||||||||| ||||||| Sbjct: 4253 ttccctgagtagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 137 bits (69), Expect = 1e-29 Identities = 91/99 (91%) Strand = Plus / Plus Query: 34 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancga 93 |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 160 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcga 219 Query: 94 ttcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||| ||||||||||||||||||||||| ||||||| Sbjct: 220 ttccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 137 bits (69), Expect = 1e-29 Identities = 91/99 (91%) Strand = Plus / Plus Query: 34 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancga 93 |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 160 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcga 219 Query: 94 ttcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||| ||||||||||||||||||||||| ||||||| Sbjct: 220 ttccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 135 bits (68), Expect = 6e-29 Identities = 93/102 (91%) Strand = Plus / Plus Query: 34 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancga 93 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| ||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 94 ttcccgtagtagcggcgagcgaaatgggagcngcctaaaccg 135 ||||||||||||||||||||||| ||||| | |||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 135 bits (68), Expect = 6e-29 Identities = 87/94 (92%) Strand = Plus / Minus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 2334657 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagaaaactcgattccctt 2334598 Query: 101 agtagcggcgagcgaaatgggagcngcctaaacc 134 ||||||||||||||||| |||| | ||||||||| Sbjct: 2334597 agtagcggcgagcgaaaggggaacagcctaaacc 2334564
>dbj|AK111146.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-E08, full insert sequence Length = 953 Score = 135 bits (68), Expect = 6e-29 Identities = 72/74 (97%) Strand = Plus / Plus Query: 91 cgattcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacggngttgt 150 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 6 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 65 Query: 151 gggagagcaataca 164 |||||||||||||| Sbjct: 66 gggagagcaataca 79
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 135 bits (68), Expect = 6e-29 Identities = 74/76 (97%) Strand = Plus / Minus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 89743 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccag 89684 Query: 73 aggaaaagaaagcaaa 88 |||||||||||||||| Sbjct: 89683 aggaaaagaaagcaaa 89668 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 47 gcgaactgaaacatcttagtagc 69 |||||||||||||||| |||||| Sbjct: 120027 gcgaactgaaacatctaagtagc 120049
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 135 bits (68), Expect = 6e-29 Identities = 74/76 (97%) Strand = Plus / Plus Query: 13 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 72 |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 527 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccag 586 Query: 73 aggaaaagaaagcaaa 88 |||||||||||||||| Sbjct: 587 aggaaaagaaagcaaa 602 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 47 gcgaactgaaacatcttagtagc 69 |||||||||||||||| |||||| Sbjct: 41645 gcgaactgaaacatctaagtagc 41667
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 133 bits (67), Expect = 2e-28 Identities = 92/101 (91%) Strand = Plus / Minus Query: 34 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancga 93 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||| ||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 94 ttcccgtagtagcggcgagcgaaatgggagcngcctaaacc 134 |||||| |||||||||||||||||||||| | ||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 133 bits (67), Expect = 2e-28 Identities = 92/101 (91%) Strand = Plus / Plus Query: 34 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancga 93 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||| ||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 94 ttcccgtagtagcggcgagcgaaatgggagcngcctaaacc 134 |||||| |||||||||||||||||||||| | ||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 133 bits (67), Expect = 2e-28 Identities = 95/105 (90%) Strand = Plus / Plus Query: 30 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 89 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 90 ncgattcccgtagtagcggcgagcgaaatgggagcngcctaaacc 134 |||||||| |||||||||||||||||| |||| | ||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 133 bits (67), Expect = 2e-28 Identities = 92/101 (91%) Strand = Plus / Plus Query: 34 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancga 93 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| ||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 94 ttcccgtagtagcggcgagcgaaatgggagcngcctaaacc 134 ||||| ||||||||||||||||||||||| | ||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatgggaacagcctaaacc 248
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 133 bits (67), Expect = 2e-28 Identities = 106/120 (88%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 ||||| ||||| | ||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 162 agagaaaacctagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgat 221 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacggngttgtggga 154 |||| ||||| ||||||||||| |||| | |||||||||| |||| ||| ||||||||| Sbjct: 222 tccctcagtagtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 133 bits (67), Expect = 2e-28 Identities = 86/93 (92%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 188152 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 188211 Query: 101 agtagcggcgagcgaaatgggagcngcctaaac 133 |||||||||||||||| |||| | |||||||| Sbjct: 188212 agtagcggcgagcgaagcgggaacagcctaaac 188244 Score = 133 bits (67), Expect = 2e-28 Identities = 86/93 (92%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 149709 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 149768 Query: 101 agtagcggcgagcgaaatgggagcngcctaaac 133 |||||||||||||||| |||| | |||||||| Sbjct: 149769 agtagcggcgagcgaagcgggaacagcctaaac 149801
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 133 bits (67), Expect = 2e-28 Identities = 86/93 (92%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 189075 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 189134 Query: 101 agtagcggcgagcgaaatgggagcngcctaaac 133 |||||||||||||||| |||| | |||||||| Sbjct: 189135 agtagcggcgagcgaagcgggaacagcctaaac 189167 Score = 133 bits (67), Expect = 2e-28 Identities = 86/93 (92%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 150502 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 150561 Query: 101 agtagcggcgagcgaaatgggagcngcctaaac 133 |||||||||||||||| |||| | |||||||| Sbjct: 150562 agtagcggcgagcgaagcgggaacagcctaaac 150594
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 131 bits (66), Expect = 9e-28 Identities = 85/92 (92%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 148 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaacgcgattccctt 207 Query: 101 agtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||| | ||||||| Sbjct: 208 agtagcggcgagcgaaacgggaacagcctaaa 239
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 131 bits (66), Expect = 9e-28 Identities = 85/92 (92%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 2029 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaacgcgattccctt 2088 Query: 101 agtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||| | ||||||| Sbjct: 2089 agtagcggcgagcgaaacgggaacagcctaaa 2120
>gb|AY155547.1| Cyanothece sp. PCC 8801 23S ribosomal RNA gene, partial sequence Length = 732 Score = 129 bits (65), Expect = 4e-27 Identities = 87/95 (91%) Strand = Plus / Plus Query: 40 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccg 99 ||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 167 caaccgggcgaactgaaacatcttagtagcccgaggaaaagaaagcaaaagcgattcccc 226 Query: 100 tagtagcggcgagcgaaatgggagcngcctaaacc 134 ||||||||||||||||| |||| | ||||||||| Sbjct: 227 cagtagcggcgagcgaaaagggaacagcctaaacc 261
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 127 bits (64), Expect = 1e-26 Identities = 86/94 (91%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 ||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 1692 aacctggtgaactgaaacatcttagtagccagaggaaaagaaagcaacagcgattccccc 1751 Query: 101 agtagcggcgagcgaaatgggagcngcctaaacc 134 ||||||||||||||||| |||| | ||||||||| Sbjct: 1752 agtagcggcgagcgaaaagggaacagcctaaacc 1785
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 127 bits (64), Expect = 1e-26 Identities = 92/102 (90%) Strand = Plus / Plus Query: 34 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancga 93 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||| ||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 94 ttcccgtagtagcggcgagcgaaatgggagcngcctaaaccg 135 |||||| ||||||||||||||||| |||| | |||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 127 bits (64), Expect = 1e-26 Identities = 92/102 (90%) Strand = Plus / Plus Query: 34 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancga 93 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| ||| Sbjct: 141 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 200 Query: 94 ttcccgtagtagcggcgagcgaaatgggagcngcctaaaccg 135 ||||||||||||||||||||||| ||||| | | |||||||| Sbjct: 201 ttcccgtagtagcggcgagcgaactgggaacagtctaaaccg 242
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 127 bits (64), Expect = 1e-26 Identities = 92/102 (90%) Strand = Plus / Plus Query: 34 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancga 93 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||| ||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 94 ttcccgtagtagcggcgagcgaaatgggagcngcctaaaccg 135 |||||| ||||||||||||||||| |||| | |||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 127 bits (64), Expect = 1e-26 Identities = 86/94 (91%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 101 agtagcggcgagcgaaatgggagcngcctaaacc 134 ||||| ||||||||||| || | | ||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 127 bits (64), Expect = 1e-26 Identities = 86/94 (91%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||| | | Sbjct: 1718 aacctagcgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattctctt 1777 Query: 101 agtagcggcgagcgaaatgggagcngcctaaacc 134 ||||||||||||||||| |||| | ||||||||| Sbjct: 1778 agtagcggcgagcgaaaagggaacagcctaaacc 1811
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 125 bits (63), Expect = 6e-26 Identities = 94/105 (89%) Strand = Plus / Plus Query: 30 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 89 |||||||||| |||| || |||||||||||||| ||||||| ||||||||||||||||| Sbjct: 136 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaac 195 Query: 90 ncgattcccgtagtagcggcgagcgaaatgggagcngcctaaacc 134 |||||||| |||||||||||||||||| |||| | ||||||||| Sbjct: 196 gcgattcccatagtagcggcgagcgaaaagggaacagcctaaacc 240
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 125 bits (63), Expect = 6e-26 Identities = 105/120 (87%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 ||||| ||||| | ||||||||||||||||||||| ||||||| | ||||||||| |||| Sbjct: 1929 agagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgat 1988 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacggngttgtggga 154 |||| |||||| ||||||||||| |||| | ||||||||||| ||| ||| ||||||||| Sbjct: 1989 tcccttagtagtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 123 bits (62), Expect = 2e-25 Identities = 82/89 (92%) Strand = Plus / Plus Query: 34 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancga 93 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||| ||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 94 ttcccgtagtagcggcgagcgaaatggga 122 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 123 bits (62), Expect = 2e-25 Identities = 108/124 (87%) Strand = Plus / Plus Query: 12 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 71 |||||||||| ||| ||||| |||| |||| || |||||||||||||||||||||| Sbjct: 126 cctgctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccg 185 Query: 72 gaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatgggagcngcctaa 131 ||||||||||||||||| |||||||| |||||||||||||||||| |||| | |||||| Sbjct: 186 gaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaa 245 Query: 132 accg 135 |||| Sbjct: 246 accg 249
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 123 bits (62), Expect = 2e-25 Identities = 87/96 (90%) Strand = Plus / Plus Query: 40 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccg 99 |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 100 tagtagcggcgagcgaaatgggagcngcctaaaccg 135 |||||||||||||||| |||| | |||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 123 bits (62), Expect = 2e-25 Identities = 87/96 (90%) Strand = Plus / Plus Query: 40 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccg 99 |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 222 Query: 100 tagtagcggcgagcgaaatgggagcngcctaaaccg 135 |||||||||||||||| |||| | |||||||||| Sbjct: 223 cagtagcggcgagcgaagagggaacagcctaaaccg 258
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 123 bits (62), Expect = 2e-25 Identities = 87/96 (90%) Strand = Plus / Plus Query: 40 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccg 99 |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 4737 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 4796 Query: 100 tagtagcggcgagcgaaatgggagcngcctaaaccg 135 |||||||||||||||| |||| | |||||||||| Sbjct: 4797 cagtagcggcgagcgaagagggaacagcctaaaccg 4832
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 121 bits (61), Expect = 9e-25 Identities = 61/61 (100%) Strand = Plus / Plus Query: 29 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43316 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 43375 Query: 89 a 89 | Sbjct: 43376 a 43376 Score = 107 bits (54), Expect = 1e-20 Identities = 57/58 (98%) Strand = Plus / Plus Query: 29 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 86 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40844 caggcaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 40901
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 119 bits (60), Expect = 3e-24 Identities = 76/82 (92%) Strand = Plus / Plus Query: 53 tgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgag 112 |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 113 cgaaatgggagcngcctaaacc 134 |||| ||||| ||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 119 bits (60), Expect = 3e-24 Identities = 79/86 (91%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 |||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcgg 233 Query: 109 cgagcgaaatgggagcngcctaaacc 134 |||||||| ||||| | ||||||||| Sbjct: 234 cgagcgaactgggatcagcctaaacc 259
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 119 bits (60), Expect = 3e-24 Identities = 91/102 (89%) Strand = Plus / Plus Query: 34 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancga 93 |||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| ||| Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 94 ttcccgtagtagcggcgagcgaaatgggagcngcctaaaccg 135 ||||| ||||||||||||||||||||||| | |||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249
>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1 Length = 2219 Score = 119 bits (60), Expect = 3e-24 Identities = 79/86 (91%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 |||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcgg 233 Query: 109 cgagcgaaatgggagcngcctaaacc 134 |||||||| ||||| | ||||||||| Sbjct: 234 cgagcgaactgggatcagcctaaacc 259
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 117 bits (59), Expect = 1e-23 Identities = 78/85 (91%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 ||||||||||||||||||| | |||||||||||||| |||| |||||||| ||||||||| Sbjct: 1909 gaactgaaacatcttagtacctagaggaaaagaaagtaaaaacgattcccttagtagcgg 1968 Query: 109 cgagcgaaatgggagcngcctaaac 133 |||||||||||||| | |||||||| Sbjct: 1969 cgagcgaaatgggaacagcctaaac 1993
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 115 bits (58), Expect = 5e-23 Identities = 113/132 (85%) Strand = Plus / Minus Query: 3 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 62 |||| ||| ||| |||||| ||| || ||||||||| ||| |||||||||||||||||| Sbjct: 27704 tttatactacctactgaattcataagtaggcaagagctaacttggcgaactgaaacatct 27645 Query: 63 tagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgagcgaaatggga 122 ||||||||| |||||||||||||||| |||||| | |||||| ||||| ||||| |||| Sbjct: 27644 tagtagccaaaggaaaagaaagcaaacgcgattctcttagtagtggcgaacgaaaaggga 27585 Query: 123 gcngcctaaacc 134 | ||||||||| Sbjct: 27584 acagcctaaacc 27573
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 115 bits (58), Expect = 5e-23 Identities = 96/108 (88%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 28 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 87 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 88 aancgattcccgtagtagcggcgagcgaaatgggagcngcctaaaccg 135 || |||||| |||||| ||||||||||| |||| | |||||||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccg 255
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 115 bits (58), Expect = 5e-23 Identities = 80/88 (90%) Strand = Plus / Plus Query: 47 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagc 106 ||||| ||||||||||||||||| |||||||| ||||||||| |||||||| ||||||| Sbjct: 161 gcgaattgaaacatcttagtagctggaggaaaaaaaagcaaaagcgattcccttagtagc 220 Query: 107 ggcgagcgaaatgggagcngcctaaacc 134 |||||||||||||||| | ||||||||| Sbjct: 221 ggcgagcgaaatgggaacagcctaaacc 248
>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3875 Score = 115 bits (58), Expect = 5e-23 Identities = 83/92 (90%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 ||||||| ||| ||||||||||||||| |||||||||||||||||||| |||||||| | Sbjct: 149 aacctggtgaattgaaacatcttagtaaccagaggaaaagaaagcaaacgcgattccctt 208 Query: 101 agtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||||||||| |||| | ||||||| Sbjct: 209 agtagcggcgagcgaaacgggaacagcctaaa 240
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 115 bits (58), Expect = 5e-23 Identities = 89/100 (89%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| |||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaacc 134 |||||||||||||||||||||| |||| | ||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 258
>gb|DQ313018.1| Uncultured bacterium clone 3P12F 23S ribosomal RNA gene, partial sequence Length = 798 Score = 115 bits (58), Expect = 5e-23 Identities = 77/84 (91%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 ||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 8 gaactgaaacatcttagtagccaaaggaaaagaaagcaaaagcgattcccaaagtagcgg 67 Query: 109 cgagcgaaatgggagcngcctaaa 132 |||||| ||||||| | ||||||| Sbjct: 68 cgagcggaatgggaacagcctaaa 91
>gb|DQ312920.1| Uncultured bacterium clone 3M10C 23S ribosomal RNA gene, partial sequence Length = 798 Score = 115 bits (58), Expect = 5e-23 Identities = 77/84 (91%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 ||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 8 gaactgaaacatcttagtagccaaaggaaaagaaagcaaaagcgattcccaaagtagcgg 67 Query: 109 cgagcgaaatgggagcngcctaaa 132 |||||| ||||||| | ||||||| Sbjct: 68 cgagcggaatgggaacagcctaaa 91
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 115 bits (58), Expect = 5e-23 Identities = 80/88 (90%) Strand = Plus / Plus Query: 47 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagc 106 ||||| ||||||||||||||||| |||||||| ||||||||| |||||||| ||||||| Sbjct: 1898 gcgaattgaaacatcttagtagctggaggaaaaaaaagcaaaagcgattcccttagtagc 1957 Query: 107 ggcgagcgaaatgggagcngcctaaacc 134 |||||||||||||||| | ||||||||| Sbjct: 1958 ggcgagcgaaatgggaacagcctaaacc 1985
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 115 bits (58), Expect = 5e-23 Identities = 89/100 (89%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| |||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaacc 134 |||||||||||||||||||||| |||| | ||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 258
>gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, complete genome Length = 149705 Score = 113 bits (57), Expect = 2e-22 Identities = 86/95 (90%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattccc-g 99 ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 45899 aacctagcgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattcccac 45840 Query: 100 tagtagcggcgagcgaaatgggagcngcctaaacc 134 |||||| ||||||||||| |||| | ||||||||| Sbjct: 45839 tagtagtggcgagcgaaaggggaacagcctaaacc 45805
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 113 bits (57), Expect = 2e-22 Identities = 94/107 (87%) Strand = Plus / Plus Query: 29 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 88 |||| ||||||||||| |||||| |||||||||||||||||| | ||||||||||||||| Sbjct: 143 caggtaagagacaacccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaa 202 Query: 89 ancgattcccgtagtagcggcgagcgaaatgggagcngcctaaaccg 135 |||||||| |||||| ||||||||||| |||| | | |||||||| Sbjct: 203 cgcgattcccttagtagtggcgagcgaaaagggatcagtctaaaccg 249
>dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D Length = 149987 Score = 113 bits (57), Expect = 2e-22 Identities = 86/95 (90%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattccc-g 99 ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 19480 aacctagcgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattcccac 19539 Query: 100 tagtagcggcgagcgaaatgggagcngcctaaacc 134 |||||| ||||||||||| |||| | ||||||||| Sbjct: 19540 tagtagtggcgagcgaaaggggaacagcctaaacc 19574
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 111 bits (56), Expect = 8e-22 Identities = 84/94 (89%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 ||||||| || |||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 1691 aacctggtgagctgaaacatcttagtagccagaggaaaagaaagcaacagcgattccccc 1750 Query: 101 agtagcggcgagcgaaatgggagcngcctaaacc 134 |||||||||||||||| |||| | ||||||||| Sbjct: 1751 cgtagcggcgagcgaaaagggaacagcctaaacc 1784
>gb|AE012979.1| Thermoanaerobacter tengcongensis MB4, section 6 of 244 of the complete genome Length = 12243 Score = 111 bits (56), Expect = 8e-22 Identities = 76/83 (91%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 |||| ||||||||||||||||| ||||||| |||||||||||||||||| |||||||| Sbjct: 9145 aaccgggcgaactgaaacatctaagtagcccgaggaaaagaaagcaaaagcgattcccta 9204 Query: 101 agtagcggcgagcgaaatgggag 123 ||||||||||||||||| ||||| Sbjct: 9205 agtagcggcgagcgaaaggggag 9227
>gb|AE012982.1| Thermoanaerobacter tengcongensis MB4, section 9 of 244 of the complete genome Length = 6166 Score = 111 bits (56), Expect = 8e-22 Identities = 76/83 (91%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 |||| ||||||||||||||||| ||||||| |||||||||||||||||| |||||||| Sbjct: 1954 aaccgggcgaactgaaacatctaagtagcccgaggaaaagaaagcaaaagcgattcccta 2013 Query: 101 agtagcggcgagcgaaatgggag 123 ||||||||||||||||| ||||| Sbjct: 2014 agtagcggcgagcgaaaggggag 2036
>gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5001 Score = 111 bits (56), Expect = 8e-22 Identities = 87/98 (88%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 |||||||||| | ||| ||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 149 agagacaaccgagtgaattgaaacatcttagtagctcgaggaagagaaagcaaaagcgat 208 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||| |||||||||||||||||||||| | ||||||| Sbjct: 209 tcccggagtagcggcgagcgaaatgggaacagcctaaa 246
>gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit ribosomal RNA gene, partial sequence; and putative protein genes, complete cds; chloroplast Length = 6151 Score = 111 bits (56), Expect = 8e-22 Identities = 87/98 (88%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 |||||||||| | ||| ||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 149 agagacaaccgagtgaattgaaacatcttagtagctcgaggaagagaaagcaaaagcgat 208 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||| |||||||||||||||||||||| | ||||||| Sbjct: 209 tcccggagtagcggcgagcgaaatgggaacagcctaaa 246
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 111 bits (56), Expect = 8e-22 Identities = 75/82 (91%) Strand = Plus / Plus Query: 53 tgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgag 112 ||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 113 cgaaatgggagcngcctaaacc 134 ||||| |||| | ||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 111 bits (56), Expect = 8e-22 Identities = 75/82 (91%) Strand = Plus / Plus Query: 53 tgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgag 112 ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 113 cgaaatgggagcngcctaaacc 134 |||| |||| | ||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 111 bits (56), Expect = 8e-22 Identities = 84/94 (89%) Strand = Plus / Plus Query: 40 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccg 99 ||||| || ||| |||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 100 tagtagcggcgagcgaaatgggagcngcctaaac 133 |||||||||||||||||| |||| | |||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 111 bits (56), Expect = 8e-22 Identities = 59/60 (98%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19433979 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 19433920
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 111 bits (56), Expect = 8e-22 Identities = 59/60 (98%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51506 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 111 bits (56), Expect = 8e-22 Identities = 59/60 (98%) Strand = Plus / Minus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119470 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 111 bits (56), Expect = 8e-22 Identities = 59/60 (98%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6152 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 6211
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 111 bits (56), Expect = 8e-22 Identities = 78/86 (90%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 ||||||||||||||||||||| ||||||||||||||||||| ||||| || ||||||||| Sbjct: 1860 gaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgatttccttagtagcgg 1919 Query: 109 cgagcgaaatgggagcngcctaaacc 134 |||||||| ||| | | ||||||||| Sbjct: 1920 cgagcgaactggaatcagcctaaacc 1945
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 109 bits (55), Expect = 3e-21 Identities = 89/101 (88%) Strand = Plus / Minus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaaccg 135 |||| ||||||||||||||| | |||| | |||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 109 bits (55), Expect = 3e-21 Identities = 89/101 (88%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaaccg 135 |||| ||||||||||||||| | |||| | |||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669
>gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4406 Score = 109 bits (55), Expect = 3e-21 Identities = 75/82 (91%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| |||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 95 tcccgtagtagcggcgagcgaa 116 |||||||||||||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaa 240
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 109 bits (55), Expect = 3e-21 Identities = 109/128 (85%) Strand = Plus / Minus Query: 31 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaan 90 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| |||||| Sbjct: 139114 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 139055 Query: 91 cgattcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacggngttgt 150 ||||||||| |||||||||||||||| ||||| |||||||||||| ||||| ||||| Sbjct: 139054 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 138995 Query: 151 gggagagc 158 |||||||| Sbjct: 138994 gggagagc 138987 Score = 109 bits (55), Expect = 3e-21 Identities = 109/128 (85%) Strand = Plus / Plus Query: 31 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaan 90 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| |||||| Sbjct: 82763 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 82822 Query: 91 cgattcccgtagtagcggcgagcgaaatgggagcngcctaaaccgtgaaaacggngttgt 150 ||||||||| |||||||||||||||| ||||| |||||||||||| ||||| ||||| Sbjct: 82823 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 82882 Query: 151 gggagagc 158 |||||||| Sbjct: 82883 gggagagc 82890
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 109 bits (55), Expect = 3e-21 Identities = 89/101 (88%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 |||| |||||| | ||||||||||||||||||||| || |||||||||||||||| |||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaaccg 135 |||| |||||||||||||| || |||| | |||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 109 bits (55), Expect = 3e-21 Identities = 89/101 (88%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaaccg 135 |||| ||||||||||||||| | |||| | |||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 109 bits (55), Expect = 3e-21 Identities = 89/101 (88%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 |||| |||||| | ||||||||||||||||||||| || |||||||||||||||| |||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaaccg 135 |||| |||||||||||||| || |||| | |||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015
>dbj|AB181958.1| Heterosigma akashiwo chloroplast genes for 16S rRNA, tRNA-Ile, tRNA-Ala, 23S rRNA, partial and complete sequence, strain:NIES-6 Length = 2347 Score = 109 bits (55), Expect = 3e-21 Identities = 83/93 (89%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 ||||||| ||| ||||||||||||||| ||||||||| |||||| |||| |||||| | | Sbjct: 1184 aacctggagaattgaaacatcttagtaaccagaggaatagaaagtaaaaacgattctctt 1243 Query: 101 agtagcggcgagcgaaatgggagcngcctaaac 133 |||||||||||||||||||||| | |||||||| Sbjct: 1244 agtagcggcgagcgaaatgggaacagcctaaac 1276
>dbj|AB181957.1| Heterosigma akashiwo chloroplast genes for 16S rRNA, tRNA-Ile, tRNA-Ala, 23S rRNA, partial and complete sequence, strain:NIES-5 Length = 2347 Score = 109 bits (55), Expect = 3e-21 Identities = 83/93 (89%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 ||||||| ||| ||||||||||||||| ||||||||| |||||| |||| |||||| | | Sbjct: 1184 aacctggagaattgaaacatcttagtaaccagaggaatagaaagtaaaaacgattctctt 1243 Query: 101 agtagcggcgagcgaaatgggagcngcctaaac 133 |||||||||||||||||||||| | |||||||| Sbjct: 1244 agtagcggcgagcgaaatgggaacagcctaaac 1276
>dbj|AB181956.1| Heterosigma akashiwo chloroplast genes for 16S rRNA, tRNA-Ile, tRNA-Ala, 23S rRNA, partial and complete sequence, strain:K95-Hy Length = 2346 Score = 109 bits (55), Expect = 3e-21 Identities = 83/93 (89%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 ||||||| ||| ||||||||||||||| ||||||||| |||||| |||| |||||| | | Sbjct: 1183 aacctggagaattgaaacatcttagtaaccagaggaatagaaagtaaaaacgattctctt 1242 Query: 101 agtagcggcgagcgaaatgggagcngcctaaac 133 |||||||||||||||||||||| | |||||||| Sbjct: 1243 agtagcggcgagcgaaatgggaacagcctaaac 1275
>dbj|AB181955.1| Heterosigma akashiwo chloroplast genes for 16S rRNA, tRNA-Ile, tRNA-Ala, 23S rRNA, partial and complete sequence, strain:K95-Ho Length = 2347 Score = 109 bits (55), Expect = 3e-21 Identities = 83/93 (89%) Strand = Plus / Plus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 ||||||| ||| ||||||||||||||| ||||||||| |||||| |||| |||||| | | Sbjct: 1184 aacctggagaattgaaacatcttagtaaccagaggaatagaaagtaaaaacgattctctt 1243 Query: 101 agtagcggcgagcgaaatgggagcngcctaaac 133 |||||||||||||||||||||| | |||||||| Sbjct: 1244 agtagcggcgagcgaaatgggaacagcctaaac 1276
>emb|X68891.1|CHCGRRNL1 Chloroplast Chlamydomonas geitleri rrnL gene, exon 1 Length = 1964 Score = 109 bits (55), Expect = 3e-21 Identities = 75/82 (91%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| |||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 95 tcccgtagtagcggcgagcgaa 116 |||||||||||||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaa 240
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 107 bits (54), Expect = 1e-20 Identities = 88/100 (88%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| |||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaacc 134 |||||||||||||||||||||| |||| | ||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>gb|L42847.1|MIQCPRGOL Micromonas pusilla large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2558 Score = 107 bits (54), Expect = 1e-20 Identities = 76/84 (90%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 ||||||||||||||||||||| | ||||||||||||||||| |||||||| |||||||| Sbjct: 156 gaactgaaacatcttagtagctaaaggaaaagaaagcaaaagcgattcccaaagtagcgg 215 Query: 109 cgagcgaaatgggagcngcctaaa 132 |||||| ||||||| | ||||||| Sbjct: 216 cgagcggaatgggaacagcctaaa 239
>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome Length = 164921 Score = 107 bits (54), Expect = 1e-20 Identities = 79/88 (89%) Strand = Plus / Minus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 ||||||||||||||||||| | ||||||||||||||||||| |||||||| ||||| || Sbjct: 64524 gaactgaaacatcttagtaactagaggaaaagaaagcaaaagcgattcccccagtagtgg 64465 Query: 109 cgagcgaaatgggagcngcctaaaccgt 136 ||||||||| |||| | ||||||||||| Sbjct: 64464 cgagcgaaaagggaacagcctaaaccgt 64437
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 107 bits (54), Expect = 1e-20 Identities = 57/58 (98%) Strand = Plus / Plus Query: 1 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 58 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1672 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 1729
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 105 bits (53), Expect = 5e-20 Identities = 78/87 (89%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 ||||||||||||||||||| | ||||||||||||||||| |||||||| ||||||||| Sbjct: 136649 gaactgaaacatcttagtaagcggaggaaaagaaagcaaacgcgattcccttagtagcgg 136708 Query: 109 cgagcgaaatgggagcngcctaaaccg 135 |||||||| ||||| | |||||||||| Sbjct: 136709 cgagcgaagtgggaacagcctaaaccg 136735 Score = 105 bits (53), Expect = 5e-20 Identities = 78/87 (89%) Strand = Plus / Minus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 ||||||||||||||||||| | ||||||||||||||||| |||||||| ||||||||| Sbjct: 48895 gaactgaaacatcttagtaagcggaggaaaagaaagcaaacgcgattcccttagtagcgg 48836 Query: 109 cgagcgaaatgggagcngcctaaaccg 135 |||||||| ||||| | |||||||||| Sbjct: 48835 cgagcgaagtgggaacagcctaaaccg 48809
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 105 bits (53), Expect = 5e-20 Identities = 64/68 (94%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 |||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 158 gaactgaaacatctaagtagccggaggaaaagaaagcaaacgcgattcccgtagtagcgg 217 Query: 109 cgagcgaa 116 |||||||| Sbjct: 218 cgagcgaa 225
>gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3403 Score = 103 bits (52), Expect = 2e-19 Identities = 86/98 (87%) Strand = Plus / Plus Query: 35 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgat 94 |||||||||| | |||||||||||||| |||||| |||||||||||||||||| |||| Sbjct: 141 agagacaacccagtgaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgat 200 Query: 95 tcccgtagtagcggcgagcgaaatgggagcngcctaaa 132 ||||||||||| |||||||||| |||| | ||||||| Sbjct: 201 tcccgtagtagtggcgagcgaaccgggaacagcctaaa 238
>gb|L43540.1|DUNCPRRNL Dunaliella parva Length = 5685 Score = 103 bits (52), Expect = 2e-19 Identities = 74/82 (90%) Strand = Plus / Plus Query: 53 tgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgag 112 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 219 Query: 113 cgaaatgggagcngcctaaacc 134 |||| |||| | ||||||||| Sbjct: 220 cgaaccgggaacagcctaaacc 241
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 103 bits (52), Expect = 2e-19 Identities = 77/86 (89%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 109 cgagcgaaatgggagcngcctaaacc 134 |||||||| |||| | ||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 103 bits (52), Expect = 2e-19 Identities = 77/86 (89%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 109 cgagcgaaatgggagcngcctaaacc 134 |||||||| |||| | ||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 103 bits (52), Expect = 2e-19 Identities = 77/86 (89%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 109 cgagcgaaatgggagcngcctaaacc 134 |||||||| |||| | ||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large subunit ribosomal RNA (rrnL) gene Length = 2792 Score = 103 bits (52), Expect = 2e-19 Identities = 77/86 (89%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 |||||||||||||| |||||| |||||||||||||||||| ||||||||||||||| || Sbjct: 156 gaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgattcccgtagtagtgg 215 Query: 109 cgagcgaaatgggagcngcctaaacc 134 |||||||| |||| | ||||||||| Sbjct: 216 cgagcgaaccgggaacagcctaaacc 241
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 103 bits (52), Expect = 2e-19 Identities = 75/83 (90%) Strand = Plus / Plus Query: 34 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancga 93 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||| ||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 94 ttcccgtagtagcggcgagcgaa 116 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 103 bits (52), Expect = 2e-19 Identities = 77/86 (89%) Strand = Plus / Minus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 109 cgagcgaaatgggagcngcctaaacc 134 |||||||| |||| | ||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 103 bits (52), Expect = 2e-19 Identities = 77/86 (89%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 109 cgagcgaaatgggagcngcctaaacc 134 |||||||| |||| | ||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082
>emb|X61179.1|CHPLIB P.littoralis chloroplast DNA for 23S rRNA (partial) and 5S rRNA Length = 2957 Score = 103 bits (52), Expect = 2e-19 Identities = 78/87 (89%) Strand = Plus / Plus Query: 28 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 87 ||||| ||||| ||||| ||||| ||||||||||||||||| |||||||||||||| || Sbjct: 5 gcaggaaagagcgaacctagcgaattgaaacatcttagtagctagaggaaaagaaagtaa 64 Query: 88 aancgattcccgtagtagcggcgagcg 114 || |||||||| ||||||||||||||| Sbjct: 65 aaacgattcccttagtagcggcgagcg 91
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 103 bits (52), Expect = 2e-19 Identities = 77/86 (89%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 109 cgagcgaaatgggagcngcctaaacc 134 |||||||| |||| | ||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 103 bits (52), Expect = 2e-19 Identities = 77/86 (89%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 109 cgagcgaaatgggagcngcctaaacc 134 |||||||| |||| | ||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 103 bits (52), Expect = 2e-19 Identities = 77/86 (89%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 109 cgagcgaaatgggagcngcctaaacc 134 |||||||| |||| | ||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 103 bits (52), Expect = 2e-19 Identities = 77/86 (89%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 ||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||| Sbjct: 1979 gaactgaaacatcttagtaaccgaaggaaaagaaagcaaaagcgattcccttagtagcgg 2038 Query: 109 cgagcgaaatgggagcngcctaaacc 134 |||||||| ||||| ||||||||| Sbjct: 2039 cgagcgaacggggagaagcctaaacc 2064
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 103 bits (52), Expect = 2e-19 Identities = 77/86 (89%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 109 cgagcgaaatgggagcngcctaaacc 134 |||||||| |||| | ||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 103 bits (52), Expect = 2e-19 Identities = 77/86 (89%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 109 cgagcgaaatgggagcngcctaaacc 134 |||||||| |||| | ||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339
>gb|AE013109.1| Thermoanaerobacter tengcongensis MB4, section 136 of 244 of the complete genome Length = 13623 Score = 101 bits (51), Expect = 8e-19 Identities = 74/82 (90%) Strand = Plus / Minus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 |||| ||||||||||||||||| ||||||| |||||||||||||||||| |||||||| Sbjct: 2910 aaccgggcgaactgaaacatctcagtagcccgaggaaaagaaagcaaaagcgattccccg 2851 Query: 101 agtagcggcgagcgaaatggga 122 ||||| ||||||||||| |||| Sbjct: 2850 agtagtggcgagcgaaagggga 2829
>gb|AE013169.1| Thermoanaerobacter tengcongensis MB4, section 196 of 244 of the complete genome Length = 6431 Score = 101 bits (51), Expect = 8e-19 Identities = 74/82 (90%) Strand = Plus / Minus Query: 41 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgt 100 |||| ||||||||||||||||| ||||||| |||||||||||||||||| |||||||| Sbjct: 4263 aaccgggcgaactgaaacatctaagtagcccgaggaaaagaaagcaaaagcgattcccta 4204 Query: 101 agtagcggcgagcgaaatggga 122 ||||| ||||||||||| |||| Sbjct: 4203 agtagtggcgagcgaaagggga 4182
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 101 bits (51), Expect = 8e-19 Identities = 65/70 (92%) Strand = Plus / Minus Query: 53 tgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgag 112 ||||||||||||||| | ||||||||||||||||||| |||||||| |||||||||||| Sbjct: 18875 tgaaacatcttagtaactagaggaaaagaaagcaaaagcgattccctgagtagcggcgag 18816 Query: 113 cgaaatggga 122 |||||||||| Sbjct: 18815 cgaaatggga 18806 Score = 101 bits (51), Expect = 8e-19 Identities = 65/70 (92%) Strand = Plus / Plus Query: 53 tgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcggcgag 112 ||||||||||||||| | ||||||||||||||||||| |||||||| |||||||||||| Sbjct: 1991 tgaaacatcttagtaactagaggaaaagaaagcaaaagcgattccctgagtagcggcgag 2050 Query: 113 cgaaatggga 122 |||||||||| Sbjct: 2051 cgaaatggga 2060
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 101 bits (51), Expect = 8e-19 Identities = 76/85 (89%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 109 cgagcgaaatgggagcngcctaaac 133 |||||||| ||||| | |||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259
>gb|M19493.1|CPACYRGDG Cyanophora paradoxa 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; cyanelle genes for cyanelle products Length = 961 Score = 101 bits (51), Expect = 8e-19 Identities = 76/85 (89%) Strand = Plus / Plus Query: 49 gaactgaaacatcttagtagccagaggaaaagaaagcaaaancgattcccgtagtagcgg 108 ||||||||||||||||||| || ||||||||||||||||| |||||| | ||||||||| Sbjct: 625 gaactgaaacatcttagtaaccgaaggaaaagaaagcaaaagcgattctcttagtagcgg 684 Query: 109 cgagcgaaatgggagcngcctaaac 133 ||||||||| |||| | |||||||| Sbjct: 685 cgagcgaaacgggaccagcctaaac 709 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,353,576 Number of Sequences: 3902068 Number of extensions: 1353576 Number of successful extensions: 117654 Number of sequences better than 10.0: 4629 Number of HSP's better than 10.0 without gapping: 4588 Number of HSP's successfully gapped in prelim test: 60 Number of HSP's that attempted gapping in prelim test: 107867 Number of HSP's gapped (non-prelim): 9434 length of query: 200 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 178 effective length of database: 17,147,199,772 effective search space: 3052201559416 effective search space used: 3052201559416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
