| Clone Name | basd2a18 |
|---|---|
| Clone Library Name | barley_pub |
>OSBP1_HUMAN (P22059) Oxysterol-binding protein 1| Length = 807 Score = 65.5 bits (158), Expect = 1e-10 Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 17/84 (20%) Frame = +3 Query: 27 LENGEYERANAEKLRLEQRQRQARKMQESG-------------WKPRWFAKDKGSDT--- 158 +ENG ++ ANAEK RLE++QR +RK +E+ +K WF + K T Sbjct: 724 MENGRWDEANAEKQRLEEKQRLSRKKREAEAMKATEDGTPYDPYKALWFERKKDPVTKEL 783 Query: 159 -YRYLGGYWESREKSSWEGCPDIF 227 + Y G YWE +EK W CPDIF Sbjct: 784 THIYRGEYWECKEKQDWSSCPDIF 807
>OSBP1_RABIT (P16258) Oxysterol-binding protein 1| Length = 809 Score = 65.5 bits (158), Expect = 1e-10 Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 17/84 (20%) Frame = +3 Query: 27 LENGEYERANAEKLRLEQRQRQARKMQESG-------------WKPRWFAKDKGSDT--- 158 +ENG ++ ANAEK RLE++QR +RK +E+ +K WF + K T Sbjct: 726 MENGRWDEANAEKQRLEEKQRLSRKKREAEAMKATEDGTPYDPYKALWFERKKDPVTKEL 785 Query: 159 -YRYLGGYWESREKSSWEGCPDIF 227 + Y G YWE +EK W CPDIF Sbjct: 786 THIYRGEYWECKEKQDWNSCPDIF 809
>YB35_SCHPO (O14340) Oxysterol-binding protein homolog C2F12.05c| Length = 1310 Score = 60.8 bits (146), Expect = 4e-09 Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 18/85 (21%) Frame = +3 Query: 27 LENGEYERANAEKLRLEQRQRQARKMQESG----WKPRWFAKDK----GSDTYRYLGGYW 182 +ENG+Y+ A +EK RLE++QR+ R+M+E G W PRWF+ K G D +++ YW Sbjct: 1226 MENGQYDLAASEKNRLEEKQRKKRRMREQGEMPPWSPRWFSAAKHPVTGEDYWQFNNEYW 1285 Query: 183 ESREKS----------SWEGCPDIF 227 + RE++ W DIF Sbjct: 1286 KIREEAGEAHLAGKEFEWPNVDDIF 1310
>OSBP2_MOUSE (Q5QNQ6) Oxysterol-binding protein 2| Length = 908 Score = 60.8 bits (146), Expect = 4e-09 Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 19/86 (22%) Frame = +3 Query: 27 LENGEYERANAEKLRLEQRQRQARKM---------------QESGWKPRWFAKD----KG 149 +E G ++ AN EK RLE++QR +R+ + G+ P WF K G Sbjct: 823 MERGRWDEANTEKQRLEEKQRLSRRRRLESCTAGCGGEEEKESDGYVPLWFEKRLDPLTG 882 Query: 150 SDTYRYLGGYWESREKSSWEGCPDIF 227 Y GGYWE++EK W CP+IF Sbjct: 883 EMACMYKGGYWEAKEKKDWHMCPNIF 908
>OSH1_YEAST (P35845) Oxysterol-binding protein homolog 1| Length = 1188 Score = 58.9 bits (141), Expect = 1e-08 Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 7/74 (9%) Frame = +3 Query: 27 LENGEYERANAEKLRLEQRQRQARKMQE---SGWKPRWFAKDKGSDT----YRYLGGYWE 185 +ENGEY++A AEK R+E +QR A+K +E ++P+WF +++ T +++ G YW Sbjct: 1115 MENGEYDKAAAEKHRVEVKQRAAKKEREQKGEEYRPKWFVQEEHPVTKSLYWKFNGEYWN 1174 Query: 186 SREKSSWEGCPDIF 227 R+ ++ C DIF Sbjct: 1175 KRKNHDFKDCADIF 1188
>OSBP2_HUMAN (Q969R2) Oxysterol-binding protein 2 (Oxysterol-binding| protein-related protein 4) (OSBP-related protein 4) (ORP-4) Length = 916 Score = 57.0 bits (136), Expect = 5e-08 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 21/88 (23%) Frame = +3 Query: 27 LENGEYERANAEKLRLEQRQRQARKM-----------------QESGWKPRWFAKD---- 143 +E G ++ AN EK RLE++QR +R+ + + P WF K Sbjct: 829 MEKGRWDEANTEKQRLEEKQRLSRRRRLEACGPGSSCSSEEEKEADAYTPLWFEKRLDPL 888 Query: 144 KGSDTYRYLGGYWESREKSSWEGCPDIF 227 G Y GGYWE++EK W CP+IF Sbjct: 889 TGEMACVYKGGYWEAKEKQDWHMCPNIF 916
>OSH2_YEAST (Q12451) Oxysterol-binding protein homolog 2| Length = 1283 Score = 56.6 bits (135), Expect = 7e-08 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 7/74 (9%) Frame = +3 Query: 27 LENGEYERANAEKLRLEQRQRQARKMQESG---WKPRWFAKDKGSDT----YRYLGGYWE 185 +E+G Y+ A EK R+E++QR AR+ +E + P+WF +D T +RY G YW Sbjct: 1210 MEDGRYDEAGDEKFRVEEKQRAARRKREENNLEYHPQWFVRDTHPITKAKYWRYTGKYWV 1269 Query: 186 SREKSSWEGCPDIF 227 R + C DIF Sbjct: 1270 KRRDHDLKDCGDIF 1283
>YEH1_SCHPO (O13944) Oxysterol-binding protein homolog C23H4.01c| Length = 945 Score = 56.6 bits (135), Expect = 7e-08 Identities = 30/80 (37%), Positives = 38/80 (47%), Gaps = 14/80 (17%) Frame = +3 Query: 30 ENGEYERANAEKLRLEQRQRQARKMQESG---WKPRWFAKDKGSDTYRYLGG-------- 176 EN + + A KL LEQ+QR+ RK E W+PRWF D G Sbjct: 866 ENNDLDHAEPLKLELEQKQRERRKEMEEKDIKWEPRWFVPSVAGDDEDEDGSGPIWQLKK 925 Query: 177 ---YWESREKSSWEGCPDIF 227 YWESRE S+W CP ++ Sbjct: 926 ENNYWESRENSTWSSCPKLW 945
>OSBL1_RAT (Q8K4M9) Oxysterol-binding protein-related protein 1 (OSBP-related| protein 1) (ORP-1) Length = 950 Score = 53.5 bits (127), Expect = 6e-07 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 7/74 (9%) Frame = +3 Query: 27 LENGEYERANAEKLRLEQRQRQARK---MQESGWKPRWFAKD----KGSDTYRYLGGYWE 185 +ENGE ++A+ EK RLE++QR ARK E WK RWF + G+ + Y G YW+ Sbjct: 881 MENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPYSGAQDWIYSGSYWD 940 Query: 186 SREKSSWEGCPDIF 227 ++ PDI+ Sbjct: 941 ----RNYFNLPDIY 950
>OSBL1_HUMAN (Q9BXW6) Oxysterol-binding protein-related protein 1 (OSBP-related| protein 1) (ORP-1) Length = 950 Score = 53.5 bits (127), Expect = 6e-07 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 7/74 (9%) Frame = +3 Query: 27 LENGEYERANAEKLRLEQRQRQARK---MQESGWKPRWFAKD----KGSDTYRYLGGYWE 185 +ENGE ++A+ EK RLE++QR ARK E WK RWF + G+ + Y G YW+ Sbjct: 881 MENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPYNGAQDWIYSGSYWD 940 Query: 186 SREKSSWEGCPDIF 227 ++ PDI+ Sbjct: 941 ----RNYFNLPDIY 950
>OSBL1_MOUSE (Q91XL9) Oxysterol-binding protein-related protein 1 (OSBP-related| protein 1) (ORP-1) Length = 950 Score = 52.4 bits (124), Expect = 1e-06 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 7/74 (9%) Frame = +3 Query: 27 LENGEYERANAEKLRLEQRQRQARK---MQESGWKPRWFAKD----KGSDTYRYLGGYWE 185 +ENGE + A+ EK RLE++QR ARK E WK RWF + G+ + Y G YW+ Sbjct: 881 MENGEIDLASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPYSGAQDWIYSGSYWD 940 Query: 186 SREKSSWEGCPDIF 227 ++ PDI+ Sbjct: 941 ----RNYFNLPDIY 950
>OSBL2_MOUSE (Q8BX94) Oxysterol-binding protein-related protein 2 (OSBP-related| protein 2) (ORP-2) Length = 484 Score = 51.2 bits (121), Expect = 3e-06 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 7/74 (9%) Frame = +3 Query: 27 LENGEYERANAEKLRLEQRQRQARK---MQESGWKPRWFAKDK----GSDTYRYLGGYWE 185 +ENG + A+ EK RLE++QR+ARK +++ W+ RWF+ G+ + Y G Y+E Sbjct: 415 MENGNMDLASQEKERLEEKQREARKERAKEDAEWRTRWFSPGNNPYTGAPDWLYAGHYFE 474 Query: 186 SREKSSWEGCPDIF 227 ++ CPDI+ Sbjct: 475 ----RNFSDCPDIY 484
>OSBL2_HUMAN (Q9H1P3) Oxysterol-binding protein-related protein 2 (OSBP-related| protein 2) (ORP-2) Length = 480 Score = 50.1 bits (118), Expect = 6e-06 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 7/74 (9%) Frame = +3 Query: 27 LENGEYERANAEKLRLEQRQRQARK---MQESGWKPRWFAKDK----GSDTYRYLGGYWE 185 +ENG + A+ EK RLE++QR+AR+ +E+ W+ RWF G+ + Y G Y+E Sbjct: 411 MENGNMDLASQEKERLEEKQREARRERAKEEAEWQTRWFYPGNNPYTGTPDWLYAGDYFE 470 Query: 186 SREKSSWEGCPDIF 227 ++ CPDI+ Sbjct: 471 ----RNFSDCPDIY 480
>OSH3_YEAST (P38713) Oxysterol-binding protein homolog 3| Length = 996 Score = 39.7 bits (91), Expect = 0.008 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 3/62 (4%) Frame = +3 Query: 30 ENGEYERANAEKLRLEQRQRQARKMQESGWKPRWFAKDKGSDTYRYLGG---YWESREKS 200 E G ++A KL+LEQ QR+ R+ + +P++F K + ++Y+ G YWE R+K Sbjct: 930 EEGNVDKAEEWKLKLEQLQRE-RRNKGQDVEPKYFEK-VSKNEWKYITGPKSYWERRKKH 987 Query: 201 SW 206 W Sbjct: 988 DW 989
>OSBL5_MOUSE (Q9ER64) Oxysterol-binding protein-related protein 5 (OSBP-related| protein 5) (ORP-5) (Oxysterol-binding protein homolog 1) Length = 874 Score = 37.4 bits (85), Expect = 0.041 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 3/72 (4%) Frame = +3 Query: 18 TECLENGEYERANAEKLRLEQRQRQ-ARKMQES--GWKPRWFAKDKGSDTYRYLGGYWES 188 T + G+ +A EK LE+ QRQ AR+ Q+S WKP+ F D + +RY Sbjct: 654 TRAIREGDQHKATQEKSVLEEAQRQRAREHQQSLTPWKPQLFLLDPLTQEWRY-----RY 708 Query: 189 REKSSWEGCPDI 224 + S W+ DI Sbjct: 709 EDLSPWDPLKDI 720
>OSBL3_HUMAN (Q9H4L5) Oxysterol-binding protein-related protein 3 (OSBP-related| protein 3) (ORP-3) Length = 887 Score = 34.7 bits (78), Expect = 0.27 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Frame = +3 Query: 27 LENGEYERANAEKLRLEQRQRQARKMQESG---WKPRWFAKDKGSDTYRYLGGYWESRE 194 LE G E A +K R+EQ QR+ R++ E +PR+F K D++ G Y E R+ Sbjct: 817 LEEGNLEEAEIQKQRIEQLQRERRRVLEENHVEHQPRFFRK-SDDDSWVSNGTYLELRK 874
>OSBL3_MOUSE (Q9DBS9) Oxysterol-binding protein-related protein 3 (OSBP-related| protein 3) (ORP-3) Length = 855 Score = 34.7 bits (78), Expect = 0.27 Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%) Frame = +3 Query: 27 LENGEYERANAEKLRLEQRQRQARK-MQESG--WKPRWFAKDKGSDTYRYLGGYWESRE 194 LE G+ E A +K R+E+ QR+ R+ ++E+G +PR+F K D + G Y E R+ Sbjct: 785 LEEGDIEEAEVQKQRIEKLQRERRRVLEENGVEHQPRFFRK-SSDDAWVSNGTYLELRK 842
>SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Suppressor of| white-apricot homolog 2) Length = 659 Score = 31.2 bits (69), Expect = 3.0 Identities = 17/51 (33%), Positives = 32/51 (62%) Frame = +3 Query: 48 RANAEKLRLEQRQRQARKMQESGWKPRWFAKDKGSDTYRYLGGYWESREKS 200 RA A K+R+++R+R+ ++ +E W+ R +++ S + RY Y SR +S Sbjct: 601 RAMARKIRMKERERREKEREE--WE-RQYSRQSRSPSPRYSREYSSSRRRS 648
>SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of| white-apricot homolog 2) (Clk4-associating SR-related protein) Length = 653 Score = 31.2 bits (69), Expect = 3.0 Identities = 17/51 (33%), Positives = 32/51 (62%) Frame = +3 Query: 48 RANAEKLRLEQRQRQARKMQESGWKPRWFAKDKGSDTYRYLGGYWESREKS 200 RA A K+R+++R+R+ ++ +E W+ R +++ S + RY Y SR +S Sbjct: 595 RAMARKIRMKERERREKEREE--WE-RQYSRQSRSPSPRYSREYSSSRRRS 642
>RECK_MOUSE (Q9Z0J1) Reversion-inducing cysteine-rich protein with Kazal motifs| precursor (mRECK) Length = 971 Score = 30.8 bits (68), Expect = 3.9 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = +1 Query: 349 LKCLSACKQKAALSDTLFFRT**ECPFVQKVTLNPMFSCGDFTRTGSECC-YIGH 510 L+C ACKQ ++ +D +K N +FSC GS CC Y GH Sbjct: 111 LECRQACKQASSKNDI--------SKVCRKEYENALFSCISRNEMGSVCCSYAGH 157
>RECK_HUMAN (O95980) Reversion-inducing cysteine-rich protein with Kazal motifs| precursor (hRECK) (Suppressor of tumorigenicity 15) (ST15) Length = 971 Score = 30.8 bits (68), Expect = 3.9 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = +1 Query: 349 LKCLSACKQKAALSDTLFFRT**ECPFVQKVTLNPMFSCGDFTRTGSECC-YIGH 510 L+C ACKQ ++ +D +K N +FSC GS CC Y GH Sbjct: 111 LECRQACKQASSKNDI--------SKVCRKEYENALFSCISRNEMGSVCCSYAGH 157
>KES1_SCHPO (O74178) Protein kes1| Length = 388 Score = 30.8 bits (68), Expect = 3.9 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Frame = +3 Query: 27 LENGEYERANAEKLRLEQRQRQARKMQESG---WKPRWFA-KDK 146 L+ G+Y A+ EK ++E+ QR+ R+ +E W ++F KDK Sbjct: 321 LDAGDYAAASQEKSKIEEGQRELRRQEEEHNEVWHRKYFEWKDK 364
>MTMRD_XENLA (Q6NTN5) Myotubularin-related protein 13 (SET-binding factor 2)| Length = 1873 Score = 30.4 bits (67), Expect = 5.1 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +3 Query: 114 GWKPRWFAKDKGSDTYRYLGGYWESREKSSWEGCPDI 224 GWKPRWF D R Y++S E +S +G D+ Sbjct: 1783 GWKPRWFVLDITKHQLR----YYDSGEDTSCKGYIDL 1815
>MTMRD_HUMAN (Q86WG5) Myotubularin-related protein 13 (SET-binding factor 2)| Length = 1849 Score = 30.4 bits (67), Expect = 5.1 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +3 Query: 114 GWKPRWFAKDKGSDTYRYLGGYWESREKSSWEGCPDI 224 GWKPRWF D R Y++S E +S +G D+ Sbjct: 1759 GWKPRWFVLDVTKHQLR----YYDSGEDTSCKGHIDL 1791
>BIRC6_HUMAN (Q9NR09) Baculoviral IAP repeat-containing protein 6| (Ubiquitin-conjugating BIR-domain enzyme apollon) Length = 4829 Score = 30.0 bits (66), Expect = 6.6 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Frame = -1 Query: 330 LKMEPTDSKRRTENQKTCNLLEPSQLSLDRLEVVRKCQGSLPSCSFLWIPSNHRG--SGM 157 +K E T R++EN + C+LL+ +++ R + + + C+ L H + + Sbjct: 1248 VKNENTSGTRKSENLRGCDLLQEVSVTIRRFKKTSISKERVQRCAMLQFSEFHEKLLNTL 1307 Query: 156 CRYLYPSQTTE 124 CR Q TE Sbjct: 1308 CRKTDDGQITE 1318
>KES1_USTMA (P0C199) Protein KES1| Length = 383 Score = 30.0 bits (66), Expect = 6.6 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = +3 Query: 27 LENGEYERANAEKLRLEQRQRQARKMQESGWKP 125 + +G++E A+ +K R+E QRQ RK + + P Sbjct: 312 IRSGDFETASKDKARIENAQRQKRKDEAAAGTP 344 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,796,634 Number of Sequences: 219361 Number of extensions: 1980130 Number of successful extensions: 4934 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 4764 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4917 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)