ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483606.1| Oryza sativa (japonica cultivar-group), mRNA 141 3e-30
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
3dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
4dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
5dbj|AK101733.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 3e-30
6dbj|AK066525.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 3e-30
7gb|AC009348.6|AC009348 Drosophila melanogaster, chromosome 3R, r... 42 1.7
8gb|AE003732.3| Drosophila melanogaster chromosome 3R, section 70... 42 1.7
9emb|CR932438.14| Zebrafish DNA sequence from clone DKEY-250O4 in... 40 6.9
10gb|AC122264.3| Mus musculus BAC clone RP23-197G20 from chromosom... 40 6.9
11gb|AC124378.3| Mus musculus BAC clone RP24-397F8 from chromosome... 40 6.9
12gb|AC098587.5| Homo sapiens BAC clone RP11-231C18 from 4, comple... 40 6.9
13gb|AC113481.12| Mus musculus chromosome 12, clone RP23-310G22, c... 40 6.9
14ref|XM_761394.1| Theileria parva strain Muguga chromosome 1 hypo... 40 6.9
15gb|AC112677.8| Mus musculus chromosome 3, clone RP23-176J23, com... 40 6.9
16gb|AC149580.19| Medicago truncatula clone mth2-123f14, complete ... 40 6.9
17gb|AC148764.16| Medicago truncatula clone mth2-30o12, complete s... 40 6.9
18ref|XM_964454.1| PREDICTED: Tribolium castaneum hypothetical pro... 40 6.9
19emb|BX571867.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 40 6.9
20gb|AC066616.7| Homo sapiens chromosome 15 clone RP11-925D8 map 1... 40 6.9
21gb|AC151838.6| Mus musculus BAC clone RP23-226C6 from chromosome... 40 6.9
22gb|AC111006.5| Homo sapiens BAC clone RP11-761E21 from 4, comple... 40 6.9
23ref|NM_075484.2| Caenorhabditis elegans F19B2.6 (F19B2.6) mRNA, ... 40 6.9
24gb|AC160924.1| Medicago truncatula chromosome 7 BAC clone mte1-7... 40 6.9
25gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355... 40 6.9
26emb|BX855612.9| Zebrafish DNA sequence from clone CH211-198C22 i... 40 6.9
27emb|AL021447.3|CEF19B2 Caenorhabditis elegans Cosmid F19B2, comp... 40 6.9 
>ref|XM_483606.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3172

 Score =  141 bits (71), Expect = 3e-30
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                        
Query: 270  gtggttttgttccttctgggcagatggctgggatgcattcttatatgctgcatcctcaag 329
            |||||||||||||||||| |||||| || |||||||||||||||||| ||||||||||||
Sbjct: 1380 gtggttttgttccttctgcgcagattgccgggatgcattcttatatgatgcatcctcaag 1439

                                                               
Query: 330  gtattcctcaatctttagcctcgcccaactctggtgttcctcagtttggta 380
            || |||||| ||||||||| ||||| ||||| | |||||||||||||||||
Sbjct: 1440 gtgttcctccatctttagcatcgcctaactccgctgttcctcagtttggta 1490



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacagtatgttgaaatgcagcaaggttttctgcacacaatacaacgactacagctagaa 61
            |||||||||||||| |||||    ||||||||||| || ||||||| ||| |||||||||
Sbjct: 1085 caacagtatgttgagatgcaaaggggttttctgcataccatacaacaacttcagctagaa 1144

                                        
Query: 62   cttattgaattaagagaccgtactggag 89
            || | ||||||||||||||| |||||||
Sbjct: 1145 ctaaatgaattaagagaccgaactggag 1172



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 73/90 (81%)
 Strand = Plus / Plus

                                                                        
Query: 419  aatcaacaggaagcacaagctgtctcacaaacacctgatgcaacaaactatgacccatca 478
            |||||||||||||| ||   || ||| || ||||| |||| |||||||||| || |||| 
Sbjct: 1535 aatcaacaggaagctcagaatgcctctcagacaccagatgaaacaaactatcacacatcc 1594

                                          
Query: 479  caatcagatcagaatgcattacaaccagct 508
            | | |||||||||| ||||| |||| ||||
Sbjct: 1595 ccaccagatcagaaggcattgcaacaagct 1624



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 160  catggctgcaaatggtagtg 179
            ||||||||||||||||||||
Sbjct: 1246 catggctgcaaatggtagtg 1265
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  141 bits (71), Expect = 3e-30
 Identities = 101/111 (90%)
 Strand = Plus / Minus

                                                                            
Query: 270      gtggttttgttccttctgggcagatggctgggatgcattcttatatgctgcatcctcaag 329
                |||||||||||||||||| |||||| || |||||||||||||||||| ||||||||||||
Sbjct: 27206139 gtggttttgttccttctgcgcagattgccgggatgcattcttatatgatgcatcctcaag 27206080

                                                                   
Query: 330      gtattcctcaatctttagcctcgcccaactctggtgttcctcagtttggta 380
                || |||||| ||||||||| ||||| ||||| | |||||||||||||||||
Sbjct: 27206079 gtgttcctccatctttagcatcgcctaactccgctgttcctcagtttggta 27206029



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                            
Query: 5        cagtatgttgaaatgcagcaaggttttctgcacacaatacaacgactacagctagaactt 64
                ||||||||||| |||||    ||||||||||| || ||||||| ||| ||||||||||| 
Sbjct: 27206672 cagtatgttgagatgcaaaggggttttctgcataccatacaacaacttcagctagaacta 27206613

                                         
Query: 65       attgaattaagagaccgtactggag 89
                | ||||||||||||||| |||||||
Sbjct: 27206612 aatgaattaagagaccgaactggag 27206588



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 160      catggctgcaaatggtagtg 179
                ||||||||||||||||||||
Sbjct: 27206514 catggctgcaaatggtagtg 27206495
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>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1521_G02
          Length = 117964

 Score =  141 bits (71), Expect = 3e-30
 Identities = 101/111 (90%)
 Strand = Plus / Minus

                                                                          
Query: 270    gtggttttgttccttctgggcagatggctgggatgcattcttatatgctgcatcctcaag 329
              |||||||||||||||||| |||||| || |||||||||||||||||| ||||||||||||
Sbjct: 107172 gtggttttgttccttctgcgcagattgccgggatgcattcttatatgatgcatcctcaag 107113

                                                                 
Query: 330    gtattcctcaatctttagcctcgcccaactctggtgttcctcagtttggta 380
              || |||||| ||||||||| ||||| ||||| | |||||||||||||||||
Sbjct: 107112 gtgttcctccatctttagcatcgcctaactccgctgttcctcagtttggta 107062



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                          
Query: 5      cagtatgttgaaatgcagcaaggttttctgcacacaatacaacgactacagctagaactt 64
              ||||||||||| |||||    ||||||||||| || ||||||| ||| ||||||||||| 
Sbjct: 107705 cagtatgttgagatgcaaaggggttttctgcataccatacaacaacttcagctagaacta 107646

                                       
Query: 65     attgaattaagagaccgtactggag 89
              | ||||||||||||||| |||||||
Sbjct: 107645 aatgaattaagagaccgaactggag 107621



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    catggctgcaaatggtagtg 179
              ||||||||||||||||||||
Sbjct: 107547 catggctgcaaatggtagtg 107528
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>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0623F08
          Length = 154540

 Score =  141 bits (71), Expect = 3e-30
 Identities = 101/111 (90%)
 Strand = Plus / Minus

                                                                         
Query: 270   gtggttttgttccttctgggcagatggctgggatgcattcttatatgctgcatcctcaag 329
             |||||||||||||||||| |||||| || |||||||||||||||||| ||||||||||||
Sbjct: 29342 gtggttttgttccttctgcgcagattgccgggatgcattcttatatgatgcatcctcaag 29283

                                                                
Query: 330   gtattcctcaatctttagcctcgcccaactctggtgttcctcagtttggta 380
             || |||||| ||||||||| ||||| ||||| | |||||||||||||||||
Sbjct: 29282 gtgttcctccatctttagcatcgcctaactccgctgttcctcagtttggta 29232



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                         
Query: 5     cagtatgttgaaatgcagcaaggttttctgcacacaatacaacgactacagctagaactt 64
             ||||||||||| |||||    ||||||||||| || ||||||| ||| ||||||||||| 
Sbjct: 29875 cagtatgttgagatgcaaaggggttttctgcataccatacaacaacttcagctagaacta 29816

                                      
Query: 65    attgaattaagagaccgtactggag 89
             | ||||||||||||||| |||||||
Sbjct: 29815 aatgaattaagagaccgaactggag 29791



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   catggctgcaaatggtagtg 179
             ||||||||||||||||||||
Sbjct: 29717 catggctgcaaatggtagtg 29698
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>dbj|AK101733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061H08, full
           insert sequence
          Length = 1855

 Score =  141 bits (71), Expect = 3e-30
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                       
Query: 270 gtggttttgttccttctgggcagatggctgggatgcattcttatatgctgcatcctcaag 329
           |||||||||||||||||| |||||| || |||||||||||||||||| ||||||||||||
Sbjct: 200 gtggttttgttccttctgcgcagattgccgggatgcattcttatatgatgcatcctcaag 259

                                                              
Query: 330 gtattcctcaatctttagcctcgcccaactctggtgttcctcagtttggta 380
           || |||||| ||||||||| ||||| ||||| | |||||||||||||||||
Sbjct: 260 gtgttcctccatctttagcatcgcctaactccgctgttcctcagtttggta 310



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 73/90 (81%)
 Strand = Plus / Plus

                                                                       
Query: 419 aatcaacaggaagcacaagctgtctcacaaacacctgatgcaacaaactatgacccatca 478
           |||||||||||||| ||   || ||| || ||||| |||| |||||||||| || |||| 
Sbjct: 355 aatcaacaggaagctcagaatgcctctcagacaccagatgaaacaaactatcacacatcc 414

                                         
Query: 479 caatcagatcagaatgcattacaaccagct 508
           | | |||||||||| ||||| |||| ||||
Sbjct: 415 ccaccagatcagaaggcattgcaacaagct 444



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 catggctgcaaatggtagtg 179
           ||||||||||||||||||||
Sbjct: 66  catggctgcaaatggtagtg 85
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>dbj|AK066525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072L17, full
            insert sequence
          Length = 3173

 Score =  141 bits (71), Expect = 3e-30
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                        
Query: 270  gtggttttgttccttctgggcagatggctgggatgcattcttatatgctgcatcctcaag 329
            |||||||||||||||||| |||||| || |||||||||||||||||| ||||||||||||
Sbjct: 1380 gtggttttgttccttctgcgcagattgccgggatgcattcttatatgatgcatcctcaag 1439

                                                               
Query: 330  gtattcctcaatctttagcctcgcccaactctggtgttcctcagtttggta 380
            || |||||| ||||||||| ||||| ||||| | |||||||||||||||||
Sbjct: 1440 gtgttcctccatctttagcatcgcctaactccgctgttcctcagtttggta 1490



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacagtatgttgaaatgcagcaaggttttctgcacacaatacaacgactacagctagaa 61
            |||||||||||||| |||||    ||||||||||| || ||||||| ||| |||||||||
Sbjct: 1085 caacagtatgttgagatgcaaaggggttttctgcataccatacaacaacttcagctagaa 1144

                                        
Query: 62   cttattgaattaagagaccgtactggag 89
            || | ||||||||||||||| |||||||
Sbjct: 1145 ctaaatgaattaagagaccgaactggag 1172



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 73/90 (81%)
 Strand = Plus / Plus

                                                                        
Query: 419  aatcaacaggaagcacaagctgtctcacaaacacctgatgcaacaaactatgacccatca 478
            |||||||||||||| ||   || ||| || ||||| |||| |||||||||| || |||| 
Sbjct: 1535 aatcaacaggaagctcagaatgcctctcagacaccagatgaaacaaactatcacacatcc 1594

                                          
Query: 479  caatcagatcagaatgcattacaaccagct 508
            | | |||||||||| ||||| |||| ||||
Sbjct: 1595 ccaccagatcagaaggcattgcaacaagct 1624



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 160  catggctgcaaatggtagtg 179
            ||||||||||||||||||||
Sbjct: 1246 catggctgcaaatggtagtg 1265
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>gb|AC009348.6|AC009348 Drosophila melanogaster, chromosome 3R, region 93A-93B, BAC clone
             BACR05I01, complete sequence
          Length = 187151

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 286   tgggcagatggctgggatgca 306
             |||||||||||||||||||||
Sbjct: 35511 tgggcagatggctgggatgca 35491
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>gb|AE003732.3| Drosophila melanogaster chromosome 3R, section 70 of 118 of the complete
              sequence
          Length = 224529

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 286    tgggcagatggctgggatgca 306
              |||||||||||||||||||||
Sbjct: 183843 tgggcagatggctgggatgca 183823
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>emb|CR932438.14| Zebrafish DNA sequence from clone DKEY-250O4 in linkage group 13,
             complete sequence
          Length = 56325

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     caacagtatgttgaaatgca 21
             ||||||||||||||||||||
Sbjct: 39182 caacagtatgttgaaatgca 39201
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>gb|AC122264.3| Mus musculus BAC clone RP23-197G20 from chromosome 12, complete sequence
          Length = 199646

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 432    cacaagctgtctcacaaacacctg 455
              ||||||||||||||||| ||||||
Sbjct: 130699 cacaagctgtctcacaaccacctg 130676
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>gb|AC124378.3| Mus musculus BAC clone RP24-397F8 from chromosome 12, complete sequence
          Length = 140121

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 432   cacaagctgtctcacaaacacctg 455
             ||||||||||||||||| ||||||
Sbjct: 21160 cacaagctgtctcacaaccacctg 21137
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>gb|AC098587.5| Homo sapiens BAC clone RP11-231C18 from 4, complete sequence
          Length = 132164

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 307   ttcttatatgctgcatcctcaaggtattcctc 338
             |||||| |||||| ||||||||||| ||||||
Sbjct: 71258 ttcttagatgctggatcctcaaggtgttcctc 71289
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>gb|AC113481.12| Mus musculus chromosome 12, clone RP23-310G22, complete sequence
          Length = 199650

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 269   agtggttttgttccttctgggcag 292
             |||||||||||| |||||||||||
Sbjct: 22482 agtggttttgtttcttctgggcag 22505
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>ref|XM_761394.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
            (TP01_0966) partial mRNA
          Length = 6234

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 483  cagatcagaatgcattacaa 502
            ||||||||||||||||||||
Sbjct: 5579 cagatcagaatgcattacaa 5598
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>gb|AC112677.8| Mus musculus chromosome 3, clone RP23-176J23, complete sequence
          Length = 215247

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     aaatgcagcaaggttttctg 34
              ||||||||||||||||||||
Sbjct: 113276 aaatgcagcaaggttttctg 113257
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>gb|AC149580.19| Medicago truncatula clone mth2-123f14, complete sequence
          Length = 123565

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 370   tcagtttggtacttttcagc 389
             ||||||||||||||||||||
Sbjct: 37778 tcagtttggtacttttcagc 37759



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 370   tcagtttggtacttttcagc 389
             ||||||||||||||||||||
Sbjct: 18638 tcagtttggtacttttcagc 18619
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>gb|AC148764.16| Medicago truncatula clone mth2-30o12, complete sequence
          Length = 107371

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 475   atcacaatcagatcagaatg 494
             ||||||||||||||||||||
Sbjct: 50638 atcacaatcagatcagaatg 50619



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 475   atcacaatcagatcagaatg 494
             ||||||||||||||||||||
Sbjct: 48481 atcacaatcagatcagaatg 48462
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>ref|XM_964454.1| PREDICTED: Tribolium castaneum hypothetical protein LOC658041
            (LOC658041), mRNA
          Length = 2019

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 365  gttcctcagtttggtacttt 384
            ||||||||||||||||||||
Sbjct: 1210 gttcctcagtttggtacttt 1191
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>emb|BX571867.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              9/17
          Length = 336609

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 307    ttcttatatgctgcatcctcaagg 330
              |||||||||| |||||||||||||
Sbjct: 105646 ttcttatatgatgcatcctcaagg 105669
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>gb|AC066616.7| Homo sapiens chromosome 15 clone RP11-925D8 map 15q21.3, complete
              sequence
          Length = 209779

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 363    gtgttcctcagtttggtact 382
              ||||||||||||||||||||
Sbjct: 155876 gtgttcctcagtttggtact 155857
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>gb|AC151838.6| Mus musculus BAC clone RP23-226C6 from chromosome 7, complete sequence
          Length = 222398

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    ctcctttaagggaaataatg 230
              ||||||||||||||||||||
Sbjct: 151630 ctcctttaagggaaataatg 151649
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>gb|AC111006.5| Homo sapiens BAC clone RP11-761E21 from 4, complete sequence
          Length = 123019

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   ctctggtgttcctcagtttg 377
             ||||||||||||||||||||
Sbjct: 66393 ctctggtgttcctcagtttg 66412
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>ref|NM_075484.2| Caenorhabditis elegans F19B2.6 (F19B2.6) mRNA, complete cds
          Length = 2424

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 13   tgaaatgcagcaaggttttc 32
            ||||||||||||||||||||
Sbjct: 1395 tgaaatgcagcaaggttttc 1414
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>gb|AC160924.1| Medicago truncatula chromosome 7 BAC clone mte1-74g1, complete
            sequence
          Length = 98471

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 475  atcacaatcagatcagaatg 494
            ||||||||||||||||||||
Sbjct: 7724 atcacaatcagatcagaatg 7705



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 475  atcacaatcagatcagaatg 494
            ||||||||||||||||||||
Sbjct: 5567 atcacaatcagatcagaatg 5548
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>gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355N15 map 15q21.3, complete
            sequence
          Length = 173386

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 363  gtgttcctcagtttggtact 382
            ||||||||||||||||||||
Sbjct: 6107 gtgttcctcagtttggtact 6088
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>emb|BX855612.9| Zebrafish DNA sequence from clone CH211-198C22 in linkage group 19,
             complete sequence
          Length = 212866

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 155   agcagcatggctgcaaatggtagt 178
             ||||||||||||||||| ||||||
Sbjct: 56931 agcagcatggctgcaaacggtagt 56954
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>emb|AL021447.3|CEF19B2 Caenorhabditis elegans Cosmid F19B2, complete sequence
          Length = 38950

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    tgaaatgcagcaaggttttc 32
             ||||||||||||||||||||
Sbjct: 11439 tgaaatgcagcaaggttttc 11458


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,604,426
Number of Sequences: 3902068
Number of extensions: 4604426
Number of successful extensions: 82856
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82776
Number of HSP's gapped (non-prelim): 78
length of query: 508
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 486
effective length of database: 17,147,199,772
effective search space: 8333539089192
effective search space used: 8333539089192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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