| Clone Name | basd2a06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | PAC2_YEAST (P39937) Protein PAC2 | 33 | 0.94 | 2 | MAM1_SCHPO (P78966) Mating factor M secretion protein mam1 (Mult... | 31 | 2.7 |
|---|
>PAC2_YEAST (P39937) Protein PAC2| Length = 518 Score = 32.7 bits (73), Expect = 0.94 Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 1/98 (1%) Frame = +1 Query: 172 LVLTHWTGLTGQCH-VSR*KEWQNLKISQNIEHTMWTNMEIFHHIWSNRLRDSSKFQFLQ 348 L L +T + C + K ++L ISQN + W N++ + LR SS + Sbjct: 159 LSLNLFTNINSLCEFIEPLKNLESLNISQNKLLSGWDNLKEYDLSHIKTLRLSSCGLSYK 218 Query: 349 FWGKKLGNFVFRKF*KLHITLSIACSTNIENFQHILPC 462 GK L +F R L ++ + S I+NF++ +PC Sbjct: 219 HIGKLLKSF--RTLKMLDLSYNNLTSAGIQNFENEIPC 254
>MAM1_SCHPO (P78966) Mating factor M secretion protein mam1 (Multiple drug| resistance protein homolog) (P-glycoprotein) Length = 1336 Score = 31.2 bits (69), Expect = 2.7 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%) Frame = +3 Query: 321 RFIKISISAILGKKIGQFCFQKILKIAHNIKHSMFY*YRKFSTYLAMQTERFIKISISTI 500 RF+ +SAI GK+ CF + + K S FY + + L +R I+ +I Sbjct: 171 RFLWQYLSAIAGKRARSLCFHVL-----SSKSSTFYSLTESKSGLVNSVDRCIQFYEKSI 225 Query: 501 -LTQFHRTGSMACGLTC 548 L FH ++A L+C Sbjct: 226 SLPMFHIAENLAISLSC 242 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,998,909 Number of Sequences: 219361 Number of extensions: 2071433 Number of successful extensions: 5169 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 4769 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5157 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)