Clone Name	basd1k18
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_478737.1| Oryza sativa (japonica cultivar-group), mRNA	135	2e-28
2	dbj|AK101955.1| Oryza sativa (japonica cultivar-group) cDNA clon...	135	2e-28
3	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	113	7e-22
4	dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic D...	113	7e-22
5	dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic D...	113	7e-22
6	emb|CR378668.1| Photobacterium profundum SS9; segment 6/12	44	0.52
7	gb|AC069542.7| Homo sapiens chromosome 10 clone RP11-390B4, comp...	44	0.52
8	ref|XM_691859.1| PREDICTED: Danio rerio similar to Leucine-rich ...	44	0.52
9	gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome	42	2.0
10	emb|CR391914.17| Zebrafish DNA sequence from clone CH211-69O18 i...	42	2.0
11	gb|AC012081.16| Homo sapiens 3 BAC RP11-416O18 (Roswell Park Can...	42	2.0
12	ref|XM_774092.1| Giardia lamblia ATCC 50803 proteasome delta (GL...	42	2.0
13	gb|AC073109.2| Homo sapiens BAC clone RP11-502P9 from 7, complet...	42	2.0
14	emb|AL121899.37|HSBA128M1 Human DNA sequence from clone RP11-128...	42	2.0
15	gb|AC105008.5| Homo sapiens chromosome 8, clone CTD-2589E21, com...	42	2.0
16	emb|BX296552.9| Zebrafish DNA sequence from clone CH211-247P22, ...	42	2.0
17	gb|AC016157.2|AC016157 Drosophila melanogaster, chromosome 3R, r...	42	2.0
18	gb|AC007645.4|AC007645 Drosophila melanogaster, chromosome 3R, r...	42	2.0
19	gb|AE003689.2| Drosophila melanogaster chromosome 3R, section 27...	42	2.0
20	gb|AC034198.7| Homo sapiens chromosome 3 clone RP11-767C1 map 3p...	42	2.0
21	gb|AC026170.5| Homo sapiens chromosome 3 clone RP11-163D23 map 3...	42	2.0
22	gb|AC154844.2| Mus musculus BAC clone RP23-46K13 from chromosome...	40	8.1
23	gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c...	40	8.1
24	ref|XM_419317.1| PREDICTED: Gallus gallus similar to RAB5 intera...	40	8.1
25	gb|AC089993.2| Bos taurus clone RP42-553M7, complete sequence	40	8.1
26	gb|DP000008.1| Bos taurus target 1 genomic scaffold	40	8.1
27	ref|XM_842950.1| Leishmania major strain Friedlin phosphatidylin...	40	8.1
28	gb|AC136628.2| Homo sapiens chromosome 5 clone RP11-798K23, comp...	40	8.1
29	gb|AC136604.2| Homo sapiens chromosome 5 clone RP11-1379J22, com...	40	8.1
30	ref|XM_674017.1| Plasmodium berghei strain ANKA hypothetical pro...	40	8.1
31	gb|AY365055.1| Chlamydomonas reinhardtii NADH:ubiquinone oxidore...	40	8.1
32	emb|AL136170.14| Human DNA sequence from clone RP5-1198E17 on ch...	40	8.1
33	gb|AC010196.5| Homo sapiens 12 BAC RP11-202H2 (Roswell Park Canc...	40	8.1
34	emb|AL031289.1|HS739H11 Human DNA sequence from clone RP4-739H11...	40	8.1
35	emb|CR376848.7| Zebrafish DNA sequence from clone CH211-197K23 i...	40	8.1
36	gb|AC154755.2| Mus musculus BAC clone RP24-406B22 from chromosom...	40	8.1
37	gb|AC027016.4|AC027016 Homo sapiens chromosome 11, clone RP11-43...	40	8.1
38	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	40	8.1
39	gb|AC067940.5| Homo sapiens BAC clone RP11-818E9 from 2, complet...	40	8.1
40	gb|AC139713.1| Homo sapiens BAC clone RP11-481K16 from 4, comple...	40	8.1
41	gb|AC078815.22| Homo sapiens 12q BAC RP11-766N7 (Roswell Park Ca...	40	8.1
42	gb|AC113425.2| Homo sapiens chromosome 5 clone RP11-626B22, comp...	40	8.1
43	gb|AC155275.1| Mus musculus BAC clone RP23-20M21 from chromosome...	40	8.1
44	gb|AC113286.11| Mus musculus chromosome 1, clone RP23-411P10, co...	40	8.1
45	emb|CR385023.7| Zebrafish DNA sequence from clone CH211-89E5 in ...	40	8.1
46	emb|BX511269.12| Zebrafish DNA sequence from clone CH211-207N9 i...	40	8.1
47	dbj|AK061316.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	8.1
48	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	40	8.1
49	emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa...	40	8.1
50	emb|AL831776.3| Mouse DNA sequence from clone RP23-307M2 on chro...	40	8.1
51	dbj|AB000506.1| Carrot mRNA for root specific gene, complete cds	40	8.1

---

>ref|XM_478737.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1855

 Score =  135 bits (68), Expect = 2e-28
 Identities = 205/252 (81%), Gaps = 9/252 (3%)
 Strand = Plus / Plus

                                                                       
Query: 5   aagcagagagttgctgaattgaaaagggagctgaggaagtcagaaagttttattgggtcc 64
           |||| ||||||||||||||| | ||  || |||| |||||| |||| ||||||||| |||
Sbjct: 433 aagcggagagttgctgaattaagaaatgatctgaagaagtctgaaaattttattggatcc 492

                                                                       
Query: 65  ttgcagtctgtgattgagagcctcagcaatagcaaacatgataatggtaacttaggatgt 124
            |||||||  ||||  | ||||||||||||||||| |||||| |||| ||||  | ||||
Sbjct: 493 ctgcagtccatgatcaaaagcctcagcaatagcaagcatgatgatggcaactctgaatgt 552

                                                                       
Query: 125 cacact---------gaatcatgttcacacactgaaaatgcagctgatactacttcttcg 175
           ||||||         || ||||||||| | | ||||||| |||||||||  | ||| || 
Sbjct: 553 cacactagtcatactgagtcatgttcaaataatgaaaatacagctgataacaattcatca 612

                                                                       
Query: 176 agcaaagaattgtccaaagacagatcgtccgcagctagttttacggaggaagcaagcaac 235
           ||||||| |||||||||||| ||||| || || ||||||||||| |||||||||||||||
Sbjct: 613 agcaaagcattgtccaaagatagatcatctgctgctagttttacagaggaagcaagcaac 672

                       
Query: 236 agtcagaaatct 247
           ||||||||||||
Sbjct: 673 agtcagaaatct 684



 Score =  107 bits (54), Expect = 4e-20
 Identities = 117/138 (84%)
 Strand = Plus / Plus

                                                                       
Query: 315 aagatggtttgctttggggctctagaaagaaaaggggattgagggataaaagggctattc 374
           ||||||||||||||||||||||||||||||||||||   |||||||||  ||| || |||
Sbjct: 782 aagatggtttgctttggggctctagaaagaaaagggccgtgagggataggaggacttttc 841

                                                                       
Query: 375 tgatggctgttgatagtggcagagatggtgaaaatatatctacaccatgcatacagggag 434
           ||||||||| | ||||| |||||| ||| || |||| ||||||| ||  |||||||  ||
Sbjct: 842 tgatggctgataatagttgcagagctggcgagaatacatctacatcacacatacagacag 901

                             
Query: 435 agggttcctctgagggct 452
           | ||||||||||| ||||
Sbjct: 902 atggttcctctgaaggct 919

---

>dbj|AK101955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075K22, full
           insert sequence
          Length = 1855

 Score =  135 bits (68), Expect = 2e-28
 Identities = 205/252 (81%), Gaps = 9/252 (3%)
 Strand = Plus / Plus

                                                                       
Query: 5   aagcagagagttgctgaattgaaaagggagctgaggaagtcagaaagttttattgggtcc 64
           |||| ||||||||||||||| | ||  || |||| |||||| |||| ||||||||| |||
Sbjct: 433 aagcggagagttgctgaattaagaaatgatctgaagaagtctgaaaattttattggatcc 492

                                                                       
Query: 65  ttgcagtctgtgattgagagcctcagcaatagcaaacatgataatggtaacttaggatgt 124
            |||||||  ||||  | ||||||||||||||||| |||||| |||| ||||  | ||||
Sbjct: 493 ctgcagtccatgatcaaaagcctcagcaatagcaagcatgatgatggcaactctgaatgt 552

                                                                       
Query: 125 cacact---------gaatcatgttcacacactgaaaatgcagctgatactacttcttcg 175
           ||||||         || ||||||||| | | ||||||| |||||||||  | ||| || 
Sbjct: 553 cacactagtcatactgagtcatgttcaaataatgaaaatacagctgataacaattcatca 612

                                                                       
Query: 176 agcaaagaattgtccaaagacagatcgtccgcagctagttttacggaggaagcaagcaac 235
           ||||||| |||||||||||| ||||| || || ||||||||||| |||||||||||||||
Sbjct: 613 agcaaagcattgtccaaagatagatcatctgctgctagttttacagaggaagcaagcaac 672

                       
Query: 236 agtcagaaatct 247
           ||||||||||||
Sbjct: 673 agtcagaaatct 684



 Score =  107 bits (54), Expect = 4e-20
 Identities = 117/138 (84%)
 Strand = Plus / Plus

                                                                       
Query: 315 aagatggtttgctttggggctctagaaagaaaaggggattgagggataaaagggctattc 374
           ||||||||||||||||||||||||||||||||||||   |||||||||  ||| || |||
Sbjct: 782 aagatggtttgctttggggctctagaaagaaaagggccgtgagggataggaggacttttc 841

                                                                       
Query: 375 tgatggctgttgatagtggcagagatggtgaaaatatatctacaccatgcatacagggag 434
           ||||||||| | ||||| |||||| ||| || |||| ||||||| ||  |||||||  ||
Sbjct: 842 tgatggctgataatagttgcagagctggcgagaatacatctacatcacacatacagacag 901

                             
Query: 435 agggttcctctgagggct 452
           | ||||||||||| ||||
Sbjct: 902 atggttcctctgaaggct 919

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  113 bits (57), Expect = 7e-22
 Identities = 108/125 (86%)
 Strand = Plus / Minus

                                                                            
Query: 123      gtcacactgaatcatgttcacacactgaaaatgcagctgatactacttcttcgagcaaag 182
                |||| ||||| ||||||||| | | ||||||| |||||||||  | ||| || |||||||
Sbjct: 22614118 gtcatactgagtcatgttcaaataatgaaaatacagctgataacaattcatcaagcaaag 22614059

                                                                            
Query: 183      aattgtccaaagacagatcgtccgcagctagttttacggaggaagcaagcaacagtcaga 242
                 |||||||||||| ||||| || || ||||||||||| ||||||||||||||||||||||
Sbjct: 22614058 cattgtccaaagatagatcatctgctgctagttttacagaggaagcaagcaacagtcaga 22613999

                     
Query: 243      aatct 247
                |||||
Sbjct: 22613998 aatct 22613994



 Score =  107 bits (54), Expect = 4e-20
 Identities = 117/138 (84%)
 Strand = Plus / Minus

                                                                            
Query: 315      aagatggtttgctttggggctctagaaagaaaaggggattgagggataaaagggctattc 374
                ||||||||||||||||||||||||||||||||||||   |||||||||  ||| || |||
Sbjct: 22613896 aagatggtttgctttggggctctagaaagaaaagggccgtgagggataggaggacttttc 22613837

                                                                            
Query: 375      tgatggctgttgatagtggcagagatggtgaaaatatatctacaccatgcatacagggag 434
                ||||||||| | ||||| |||||| ||| || |||| ||||||| ||  |||||||  ||
Sbjct: 22613836 tgatggctgataatagttgcagagctggcgagaatacatctacatcacacatacagacag 22613777

                                  
Query: 435      agggttcctctgagggct 452
                | ||||||||||| ||||
Sbjct: 22613776 atggttcctctgaaggct 22613759



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                          
Query: 5        aagcagagagttgctgaattgaaaagggagctgaggaagtcagaaagttttattgggt 62
                |||| ||||||||||||||| | ||  || |||| |||||| |||| |||||||||||
Sbjct: 22614444 aagcggagagttgctgaattaagaaatgatctgaagaagtctgaaaattttattgggt 22614387

---

>dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1773_H01
          Length = 146543

 Score =  113 bits (57), Expect = 7e-22
 Identities = 108/125 (86%)
 Strand = Plus / Minus

                                                                         
Query: 123   gtcacactgaatcatgttcacacactgaaaatgcagctgatactacttcttcgagcaaag 182
             |||| ||||| ||||||||| | | ||||||| |||||||||  | ||| || |||||||
Sbjct: 32016 gtcatactgagtcatgttcaaataatgaaaatacagctgataacaattcatcaagcaaag 31957

                                                                         
Query: 183   aattgtccaaagacagatcgtccgcagctagttttacggaggaagcaagcaacagtcaga 242
              |||||||||||| ||||| || || ||||||||||| ||||||||||||||||||||||
Sbjct: 31956 cattgtccaaagatagatcatctgctgctagttttacagaggaagcaagcaacagtcaga 31897

                  
Query: 243   aatct 247
             |||||
Sbjct: 31896 aatct 31892



 Score =  107 bits (54), Expect = 4e-20
 Identities = 117/138 (84%)
 Strand = Plus / Minus

                                                                         
Query: 315   aagatggtttgctttggggctctagaaagaaaaggggattgagggataaaagggctattc 374
             ||||||||||||||||||||||||||||||||||||   |||||||||  ||| || |||
Sbjct: 31794 aagatggtttgctttggggctctagaaagaaaagggccgtgagggataggaggacttttc 31735

                                                                         
Query: 375   tgatggctgttgatagtggcagagatggtgaaaatatatctacaccatgcatacagggag 434
             ||||||||| | ||||| |||||| ||| || |||| ||||||| ||  |||||||  ||
Sbjct: 31734 tgatggctgataatagttgcagagctggcgagaatacatctacatcacacatacagacag 31675

                               
Query: 435   agggttcctctgagggct 452
             | ||||||||||| ||||
Sbjct: 31674 atggttcctctgaaggct 31657



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 5     aagcagagagttgctgaattgaaaagggagctgaggaagtcagaaagttttattgggt 62
             |||| ||||||||||||||| | ||  || |||| |||||| |||| |||||||||||
Sbjct: 32342 aagcggagagttgctgaattaagaaatgatctgaagaagtctgaaaattttattgggt 32285

---

>dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1112_E08
          Length = 119926

 Score =  113 bits (57), Expect = 7e-22
 Identities = 108/125 (86%)
 Strand = Plus / Minus

                                                                         
Query: 123   gtcacactgaatcatgttcacacactgaaaatgcagctgatactacttcttcgagcaaag 182
             |||| ||||| ||||||||| | | ||||||| |||||||||  | ||| || |||||||
Sbjct: 94500 gtcatactgagtcatgttcaaataatgaaaatacagctgataacaattcatcaagcaaag 94441

                                                                         
Query: 183   aattgtccaaagacagatcgtccgcagctagttttacggaggaagcaagcaacagtcaga 242
              |||||||||||| ||||| || || ||||||||||| ||||||||||||||||||||||
Sbjct: 94440 cattgtccaaagatagatcatctgctgctagttttacagaggaagcaagcaacagtcaga 94381

                  
Query: 243   aatct 247
             |||||
Sbjct: 94380 aatct 94376



 Score =  107 bits (54), Expect = 4e-20
 Identities = 117/138 (84%)
 Strand = Plus / Minus

                                                                         
Query: 315   aagatggtttgctttggggctctagaaagaaaaggggattgagggataaaagggctattc 374
             ||||||||||||||||||||||||||||||||||||   |||||||||  ||| || |||
Sbjct: 94278 aagatggtttgctttggggctctagaaagaaaagggccgtgagggataggaggacttttc 94219

                                                                         
Query: 375   tgatggctgttgatagtggcagagatggtgaaaatatatctacaccatgcatacagggag 434
             ||||||||| | ||||| |||||| ||| || |||| ||||||| ||  |||||||  ||
Sbjct: 94218 tgatggctgataatagttgcagagctggcgagaatacatctacatcacacatacagacag 94159

                               
Query: 435   agggttcctctgagggct 452
             | ||||||||||| ||||
Sbjct: 94158 atggttcctctgaaggct 94141



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 5     aagcagagagttgctgaattgaaaagggagctgaggaagtcagaaagttttattgggt 62
             |||| ||||||||||||||| | ||  || |||| |||||| |||| |||||||||||
Sbjct: 94826 aagcggagagttgctgaattaagaaatgatctgaagaagtctgaaaattttattgggt 94769

---

>emb|CR378668.1| Photobacterium profundum SS9; segment 6/12
          Length = 348128

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 387    atagtggcagagatggtgaaaa 408
              ||||||||||||||||||||||
Sbjct: 234374 atagtggcagagatggtgaaaa 234395

---

>gb|AC069542.7| Homo sapiens chromosome 10 clone RP11-390B4, complete sequence
          Length = 166509

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 241    gaaatctcagaaagttcaaaatacat 266
              ||||| ||||||||||||||||||||
Sbjct: 153809 gaaatttcagaaagttcaaaatacat 153834

---

>ref|XM_691859.1| PREDICTED: Danio rerio similar to Leucine-rich repeats neuronal
           protein 1 precursor (NLRR-1) (LOC568527), mRNA
          Length = 2627

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 355 gagggataaaagggctattctg 376
           ||||||||||||||||||||||
Sbjct: 18  gagggataaaagggctattctg 39

---

>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome
          Length = 2427734

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 12      gagttgctgaattgaaaaggg 32
               |||||||||||||||||||||
Sbjct: 1934435 gagttgctgaattgaaaaggg 1934415

---

>emb|CR391914.17| Zebrafish DNA sequence from clone CH211-69O18 in linkage group 16,
             complete sequence
          Length = 170876

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 353   ttgagggataaaagggctattctga 377
             |||||||| ||||||||||||||||
Sbjct: 83973 ttgagggagaaaagggctattctga 83997

---

>gb|AC012081.16| Homo sapiens 3 BAC RP11-416O18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 178317

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 125    cacactgaatcatgttcacacactg 149
              ||||||||| |||||||||||||||
Sbjct: 110662 cacactgaagcatgttcacacactg 110686

---

>ref|XM_774092.1| Giardia lamblia ATCC 50803 proteasome delta (GLP_137_15973_15398)
           partial mRNA
          Length = 576

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 535 tgaaggctgcatgaaggaact 555
           |||||||||||||||||||||
Sbjct: 295 tgaaggctgcatgaaggaact 275

---

>gb|AC073109.2| Homo sapiens BAC clone RP11-502P9 from 7, complete sequence
          Length = 158340

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 452   tgcatgaagaaattgaaaact 472
             |||||||||||||||||||||
Sbjct: 14323 tgcatgaagaaattgaaaact 14343

---

>emb|AL121899.37|HSBA128M1 Human DNA sequence from clone RP11-128M1 on chromosome 20 Contains
            the 3' end of a variant of the STK35 gene for
            serine/threonine kinase 35, a novel gene and a CpG
            island, complete sequence
          Length = 139037

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 495  ctatgtgcaaaactccatgca 515
            |||||||||||||||||||||
Sbjct: 5238 ctatgtgcaaaactccatgca 5258

---

>gb|AC105008.5| Homo sapiens chromosome 8, clone CTD-2589E21, complete sequence
          Length = 172661

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 478   gatagagcctggtgtatctat 498
             |||||||||||||||||||||
Sbjct: 94803 gatagagcctggtgtatctat 94823

---

>emb|BX296552.9| Zebrafish DNA sequence from clone CH211-247P22, complete sequence
          Length = 171208

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 353   ttgagggataaaagggctattctga 377
             |||||||| ||||||||||||||||
Sbjct: 34848 ttgagggagaaaagggctattctga 34872

---

>gb|AC016157.2|AC016157 Drosophila melanogaster, chromosome 3R, region 86C-86D, BAC clone
              BACR48M22, complete sequence
          Length = 161549

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 406    aaatatatctacaccatgcat 426
              |||||||||||||||||||||
Sbjct: 132452 aaatatatctacaccatgcat 132472

---

>gb|AC007645.4|AC007645 Drosophila melanogaster, chromosome 3R, region 86C-86D, BAC clone
             BACR04L09, complete sequence
          Length = 165136

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 406   aaatatatctacaccatgcat 426
             |||||||||||||||||||||
Sbjct: 51045 aaatatatctacaccatgcat 51065

---

>gb|AE003689.2| Drosophila melanogaster chromosome 3R, section 27 of 118 of the complete
              sequence
          Length = 215899

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 406    aaatatatctacaccatgcat 426
              |||||||||||||||||||||
Sbjct: 143539 aaatatatctacaccatgcat 143559

---

>gb|AC034198.7| Homo sapiens chromosome 3 clone RP11-767C1 map 3p, complete sequence
          Length = 169005

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 150    aaaatgcagctgatactacttcttc 174
              ||||||||||||| |||||||||||
Sbjct: 168132 aaaatgcagctgaaactacttcttc 168156

---

>gb|AC026170.5| Homo sapiens chromosome 3 clone RP11-163D23 map 3p, complete sequence
          Length = 145212

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 150    aaaatgcagctgatactacttcttc 174
              ||||||||||||| |||||||||||
Sbjct: 138933 aaaatgcagctgaaactacttcttc 138909

---

>gb|AC154844.2| Mus musculus BAC clone RP23-46K13 from chromosome 16, complete sequence
          Length = 196946

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   agaaagttcaaaatacatca 268
             ||||||||||||||||||||
Sbjct: 10075 agaaagttcaaaatacatca 10094

---

>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 427    acagggagagggttcctctgaggg 450
              |||||| |||||||||||||||||
Sbjct: 363856 acagggggagggttcctctgaggg 363879

---

>ref|XM_419317.1| PREDICTED: Gallus gallus similar to RAB5 interacting protein 2; RAS
            association (RalGDS/AF-6) domain containing protein
            JC265; RAS interaction/interference protein 2; RAS
            inhibitor JC265; RAS association domain family 4
            (LOC421246), mRNA
          Length = 3536

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 544  catgaaggaactgaaaactc 563
            ||||||||||||||||||||
Sbjct: 1521 catgaaggaactgaaaactc 1502

---

>gb|AC089993.2| Bos taurus clone RP42-553M7, complete sequence
          Length = 162859

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 340   aaagaaaaggggattgaggg 359
             ||||||||||||||||||||
Sbjct: 33360 aaagaaaaggggattgaggg 33341

---

>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 340     aaagaaaaggggattgaggg 359
               ||||||||||||||||||||
Sbjct: 1399866 aaagaaaaggggattgaggg 1399847

---

>ref|XM_842950.1| Leishmania major strain Friedlin phosphatidylinositol (3,5) kinase
            (LMJ_0346) partial mRNA
          Length = 5391

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 427  acagggagagggttcctctgaggg 450
            |||||| |||||||||||||||||
Sbjct: 3261 acagggggagggttcctctgaggg 3284

---

>gb|AC136628.2| Homo sapiens chromosome 5 clone RP11-798K23, complete sequence
          Length = 137132

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 389   agtggcagagatggtgaaaa 408
             ||||||||||||||||||||
Sbjct: 22235 agtggcagagatggtgaaaa 22254

---

>gb|AC136604.2| Homo sapiens chromosome 5 clone RP11-1379J22, complete sequence
          Length = 171812

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 389    agtggcagagatggtgaaaa 408
              ||||||||||||||||||||
Sbjct: 154465 agtggcagagatggtgaaaa 154484

---

>ref|XM_674017.1| Plasmodium berghei strain ANKA hypothetical protein (PB000055.02.0)
           partial mRNA
          Length = 4494

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 455 atgaagaaattgaaaactccaaag 478
           |||||||||||||||| |||||||
Sbjct: 590 atgaagaaattgaaaattccaaag 613

---

>gb|AY365055.1| Chlamydomonas reinhardtii NADH:ubiquinone oxidoreductase B16.6
           subunit mRNA, complete cds; nuclear gene for
           mitochondrial product
          Length = 1289

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 329 tggggctctagaaagaaaag 348
           ||||||||||||||||||||
Sbjct: 37  tggggctctagaaagaaaag 18

---

>emb|AL136170.14| Human DNA sequence from clone RP5-1198E17 on chromosome 1 Contains the 3'
              end of a novel gene (KIAA2025), two novel genes (MGC2629),
              the GAS5 gene for growth arrest-specific 5, the SERPINC1
              gene for serine (or cysteine) proteinase inhibitor clade C
              (antithrombin) member 1 and a CpG island, complete sequence
          Length = 129441

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     agcaaacatgataatggtaa 114
              ||||||||||||||||||||
Sbjct: 101643 agcaaacatgataatggtaa 101662

---

>gb|AC010196.5| Homo sapiens 12 BAC RP11-202H2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 163246

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   aggggattgagggataaaag 366
             ||||||||||||||||||||
Sbjct: 57163 aggggattgagggataaaag 57144

---

>emb|AL031289.1|HS739H11 Human DNA sequence from clone RP4-739H11 on chromosome 1p33-34.2
             Contains the RIMS3 gene for regulating synaptic membrane
             exocytosis 3, a general transcription factor IIF,
             polypeptide 2, 30kDa (GTF2F2) pseudogene, a novel gene and
             the 5' end of the NFYC gene for nuclear transcription
             factor Y, gamma, complete sequence
          Length = 129950

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   atgttcacacactgaaaatg 155
             ||||||||||||||||||||
Sbjct: 89768 atgttcacacactgaaaatg 89749

---

>emb|CR376848.7| Zebrafish DNA sequence from clone CH211-197K23 in linkage group 24,
             complete sequence
          Length = 218909

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   agaaaaggggattgagggat 361
             ||||||||||||||||||||
Sbjct: 37616 agaaaaggggattgagggat 37635

---

>gb|AC154755.2| Mus musculus BAC clone RP24-406B22 from chromosome 13, complete sequence
          Length = 180363

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 263    acatcagcagagacattatc 282
              ||||||||||||||||||||
Sbjct: 153222 acatcagcagagacattatc 153241

---

>gb|AC027016.4|AC027016 Homo sapiens chromosome 11, clone RP11-439M19, complete sequence
          Length = 165843

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 452    tgcatgaagaaattgaaaac 471
              ||||||||||||||||||||
Sbjct: 117876 tgcatgaagaaattgaaaac 117857

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 83       agcctcagcaatagcaaaca 102
                ||||||||||||||||||||
Sbjct: 17664870 agcctcagcaatagcaaaca 17664851

---

>gb|AC067940.5| Homo sapiens BAC clone RP11-818E9 from 2, complete sequence
          Length = 148267

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    agagttgctgaattgaaaag 30
             ||||||||||||||||||||
Sbjct: 43861 agagttgctgaattgaaaag 43842

---

>gb|AC139713.1| Homo sapiens BAC clone RP11-481K16 from 4, complete sequence
          Length = 196020

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 252   aagttcaaaatacatcagcagaga 275
             |||||||||||||||||| |||||
Sbjct: 53550 aagttcaaaatacatcagaagaga 53527

---

>gb|AC078815.22| Homo sapiens 12q BAC RP11-766N7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163475

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 246    ctcagaaagttcaaaataca 265
              ||||||||||||||||||||
Sbjct: 144631 ctcagaaagttcaaaataca 144612

---

>gb|AC113425.2| Homo sapiens chromosome 5 clone RP11-626B22, complete sequence
          Length = 180571

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 389   agtggcagagatggtgaaaa 408
             ||||||||||||||||||||
Sbjct: 28286 agtggcagagatggtgaaaa 28305

---

>gb|AC155275.1| Mus musculus BAC clone RP23-20M21 from chromosome 16, complete sequence
          Length = 193211

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 249    agaaagttcaaaatacatca 268
              ||||||||||||||||||||
Sbjct: 164538 agaaagttcaaaatacatca 164557

---

>gb|AC113286.11| Mus musculus chromosome 1, clone RP23-411P10, complete sequence
          Length = 204629

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    aagcaagcaacagtcagaaa 244
              ||||||||||||||||||||
Sbjct: 182888 aagcaagcaacagtcagaaa 182869

---

>emb|CR385023.7| Zebrafish DNA sequence from clone CH211-89E5 in linkage group 20,
            complete sequence
          Length = 19125

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 167  acttcttcgagcaaagaatt 186
            ||||||||||||||||||||
Sbjct: 1723 acttcttcgagcaaagaatt 1742

---

>emb|BX511269.12| Zebrafish DNA sequence from clone CH211-207N9 in linkage group 20,
              complete sequence
          Length = 161408

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    acttcttcgagcaaagaatt 186
              ||||||||||||||||||||
Sbjct: 161131 acttcttcgagcaaagaatt 161150

---

>dbj|AK061316.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-D08, full
            insert sequence
          Length = 1709

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   agcctcagcaatagcaaaca 102
            ||||||||||||||||||||
Sbjct: 1704 agcctcagcaatagcaaaca 1685

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 83       agcctcagcaatagcaaaca 102
                ||||||||||||||||||||
Sbjct: 17619241 agcctcagcaatagcaaaca 17619222

---

>emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 162200

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     agcctcagcaatagcaaaca 102
              ||||||||||||||||||||
Sbjct: 157206 agcctcagcaatagcaaaca 157187

---

>emb|AL831776.3| Mouse DNA sequence from clone RP23-307M2 on chromosome 4, complete
             sequence
          Length = 204136

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   aaggggattgagggataaaa 365
             ||||||||||||||||||||
Sbjct: 62753 aaggggattgagggataaaa 62734

---

>dbj|AB000506.1| Carrot mRNA for root specific gene, complete cds
          Length = 992

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 215 tttacggaggaagcaagcaacagt 238
           |||| |||||||||||||||||||
Sbjct: 388 tttaaggaggaagcaagcaacagt 365


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,671,979
Number of Sequences: 3902068
Number of extensions: 6671979
Number of successful extensions: 128101
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 127817
Number of HSP's gapped (non-prelim): 284
length of query: 592
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 569
effective length of database: 17,143,297,704
effective search space: 9754536393576
effective search space used: 9754536393576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---