ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd1k08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK059561.1| Oryza sativa (japonica cultivar-group) cDNA clon... 626 e-176
2ref|XM_506432.1| PREDICTED Oryza sativa (japonica cultivar-group... 618 e-174
3ref|XM_478916.1| Oryza sativa (japonica cultivar-group), mRNA 618 e-174
4dbj|AK058404.1| Oryza sativa (japonica cultivar-group) cDNA clon... 618 e-174
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 603 e-169
6dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic D... 603 e-169
7dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic D... 603 e-169
8ref|NM_188926.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.53
9gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genom... 44 0.53
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.53
11emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 44 0.53
12dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
13dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
15dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
16dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
17gb|AC116811.15| Mus musculus chromosome 6, clone RP24-356D15, co... 40 8.3
18gb|BC054472.1| Mus musculus hexokinase 2, mRNA (cDNA clone MGC:6... 40 8.3
19gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 8.3
20gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 8.3
21ref|NM_013820.1| Mus musculus hexokinase 2 (Hk2), mRNA 40 8.3
22gb|AC122010.3| Mus musculus BAC clone RP24-349I15 from chromosom... 40 8.3
23gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, compl... 40 8.3
24emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.3
25emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.3
26emb|AJ238540.1|MMU238540 Mus musculus mRNA for hexokinase II 40 8.3
27dbj|AK145936.1| Mus musculus 14 days pregnant adult female place... 40 8.3
28gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 8.3
29ref|XM_394452.1| PREDICTED: Apis mellifera similar to CG32645-PB... 40 8.3
30gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 8.3
31dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 8.3
32gb|AC007305.40| Mus musculus strain 129/SvJ clone mgs1-211l20 ma... 40 8.3
33emb|Y11668.1|MMHEXII3 Mus musculus gene for hexokinase II, exon ... 40 8.3
34gb|AC156028.2| Mus musculus BAC clone RP23-61A11 from chromosome... 40 8.3
35gb|AC134525.5| Mus musculus BAC clone RP24-496F7 from 8, complet... 40 8.3
36gb|AC153850.3| Mus musculus 6 BAC RP23-81F19 (Roswell Park Cance... 40 8.3

>dbj|AK059561.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-H02, full
            insert sequence
          Length = 1983

 Score =  626 bits (316), Expect = e-176
 Identities = 529/600 (88%)
 Strand = Plus / Plus

                                                                        
Query: 2    ggcgggcgccatcaagccgctcgtctacgcgctgcggaccgggacggcctccgccaagca 61
            |||||| ||||||||||||||||| |||||||||||||| || || || || ||||||||
Sbjct: 891  ggcgggggccatcaagccgctcgtgtacgcgctgcggacgggcaccgcgtcggccaagca 950

                                                                        
Query: 62   gaatgccgcctgcgcgctgctcagcttgtcgggcatcgaggagaaccgcgccaccatcgg 121
            ||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 951  gaacgccgcgtgcgcgctgctcagcctctcgggcatcgaggagaaccgcgccaccatcgg 1010

                                                                        
Query: 122  cgcgtgtggcgccatcgcgccgctcgtcgcgctgctctccgcgggctccactcggggaaa 181
            |||||| ||||||||| | || ||||||||||||||||||||||||||||| || || ||
Sbjct: 1011 cgcgtgcggcgccatccctcccctcgtcgcgctgctctccgcgggctccacccgcggcaa 1070

                                                                        
Query: 182  gaaggacgcgctcaccacgctctaccgtctctgctcggcgcgccggaacaaagagcgtgc 241
            ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 1071 gaaggacgcgctcaccacgctctaccggctctgctcggcgcgccggaacaaggagcgcgc 1130

                                                                        
Query: 242  tgtcagcgcgggagccgtcgtgccgctcgtgcacctcatcggcgagcgcggtactgggac 301
             |||||||| || ||||||||||||||| | |||||| |||||||||| || |  |||||
Sbjct: 1131 ggtcagcgccggcgccgtcgtgccgctcatccacctcgtcggcgagcgtggcagcgggac 1190

                                                                        
Query: 302  atcggagaaggcaatggtggttcttgccagccttgcgagcatagccgagggccgcgatgc 361
             |||||||||||||||||||| || |||||||| ||| |||| | |||||||||||| ||
Sbjct: 1191 gtcggagaaggcaatggtggtcctcgccagcctcgcgggcatcgtcgagggccgcgacgc 1250

                                                                        
Query: 362  tgtggtggaagccggtgggatacccgcactggttgagaccatcgaggacggtccggcgag 421
             |||||||| ||||| |||||||| || || || ||||||||||||||||| ||||||||
Sbjct: 1251 cgtggtggaggccggcgggataccggcgcttgtcgagaccatcgaggacggcccggcgag 1310

                                                                        
Query: 422  ggagaaggagttcgccgtggtcgctctgctgcagctgtgctccgagtgctccagcaaccg 481
            ||||| ||||||||||||||| || ||||||||||| |||||||||||| || |||||||
Sbjct: 1311 ggagagggagttcgccgtggtggcgctgctgcagctctgctccgagtgcccccgcaaccg 1370

                                                                        
Query: 482  tgcgcttctcgttcgagaaggggccatcccaccccttgttgcgctctcacagtccggctc 541
             |||||||| || || || || ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 1371 cgcgcttcttgtccgtgagggcgccatcccaccgcttgtcgcgctctcgcagtccggctc 1430

                                                                        
Query: 542  tgctcgtgccaagcacaaggccgagactttgctaggttacttgcgcgagcagcggcaagg 601
            ||| ||||||||||||||||| || |||||||| || ||  | |||||||| ||||||||
Sbjct: 1431 tgcccgtgccaagcacaaggctgaaactttgcttgggtatctccgcgagcaacggcaagg 1490



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>ref|XM_506432.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1060_D03.106 mRNA
          Length = 1983

 Score =  618 bits (312), Expect = e-174
 Identities = 528/600 (88%)
 Strand = Plus / Plus

                                                                        
Query: 2    ggcgggcgccatcaagccgctcgtctacgcgctgcggaccgggacggcctccgccaagca 61
            |||||| ||||||||||||||||| |||||||||||||| || || || || ||||||||
Sbjct: 891  ggcgggggccatcaagccgctcgtgtacgcgctgcggacgggcaccgcgtcggccaagca 950

                                                                        
Query: 62   gaatgccgcctgcgcgctgctcagcttgtcgggcatcgaggagaaccgcgccaccatcgg 121
            ||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 951  gaacgccgcgtgcgcgctgctcagcctctcgggcatcgaggagaaccgcgccaccatcgg 1010

                                                                        
Query: 122  cgcgtgtggcgccatcgcgccgctcgtcgcgctgctctccgcgggctccactcggggaaa 181
            |||||| ||||||||| | || ||||||||||||||||||||||||||||| || || ||
Sbjct: 1011 cgcgtgcggcgccatccctcccctcgtcgcgctgctctccgcgggctccacccgcggcaa 1070

                                                                        
Query: 182  gaaggacgcgctcaccacgctctaccgtctctgctcggcgcgccggaacaaagagcgtgc 241
            ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 1071 gaaggacgcgctcaccacgctctaccggctctgctcggcgcgccggaacaaggagcgcgc 1130

                                                                        
Query: 242  tgtcagcgcgggagccgtcgtgccgctcgtgcacctcatcggcgagcgcggtactgggac 301
             |||||||| || ||||||||||||||| | |||||| |||||||||| || |  |||||
Sbjct: 1131 ggtcagcgccggcgccgtcgtgccgctcatccacctcgtcggcgagcgtggcagcgggac 1190

                                                                        
Query: 302  atcggagaaggcaatggtggttcttgccagccttgcgagcatagccgagggccgcgatgc 361
             |||||||||||||||||||| || |||||||| ||| |||| | |||||||||||| ||
Sbjct: 1191 gtcggagaaggcaatggtggtcctcgccagcctcgcgggcatcgtcgagggccgcgacgc 1250

                                                                        
Query: 362  tgtggtggaagccggtgggatacccgcactggttgagaccatcgaggacggtccggcgag 421
             |||||||| || || |||||||| || || || ||||||||||||||||| ||||||||
Sbjct: 1251 cgtggtggaggctggcgggataccggcgcttgtcgagaccatcgaggacggcccggcgag 1310

                                                                        
Query: 422  ggagaaggagttcgccgtggtcgctctgctgcagctgtgctccgagtgctccagcaaccg 481
            ||||| ||||||||||||||| || ||||||||||| |||||||||||| || |||||||
Sbjct: 1311 ggagagggagttcgccgtggtggcgctgctgcagctctgctccgagtgcccccgcaaccg 1370

                                                                        
Query: 482  tgcgcttctcgttcgagaaggggccatcccaccccttgttgcgctctcacagtccggctc 541
             |||||||| || || || || ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 1371 cgcgcttcttgtccgtgagggcgccatcccaccgcttgtcgcgctctcgcagtccggctc 1430

                                                                        
Query: 542  tgctcgtgccaagcacaaggccgagactttgctaggttacttgcgcgagcagcggcaagg 601
            ||| ||||||||||||||||| || |||||||| || ||  | |||||||| ||||||||
Sbjct: 1431 tgcccgtgccaagcacaaggctgaaactttgcttgggtatctccgcgagcaacggcaagg 1490



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>ref|XM_478916.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1709

 Score =  618 bits (312), Expect = e-174
 Identities = 528/600 (88%)
 Strand = Plus / Plus

                                                                        
Query: 2    ggcgggcgccatcaagccgctcgtctacgcgctgcggaccgggacggcctccgccaagca 61
            |||||| ||||||||||||||||| |||||||||||||| || || || || ||||||||
Sbjct: 894  ggcgggggccatcaagccgctcgtgtacgcgctgcggacgggcaccgcgtcggccaagca 953

                                                                        
Query: 62   gaatgccgcctgcgcgctgctcagcttgtcgggcatcgaggagaaccgcgccaccatcgg 121
            ||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 954  gaacgccgcgtgcgcgctgctcagcctctcgggcatcgaggagaaccgcgccaccatcgg 1013

                                                                        
Query: 122  cgcgtgtggcgccatcgcgccgctcgtcgcgctgctctccgcgggctccactcggggaaa 181
            |||||| ||||||||| | || ||||||||||||||||||||||||||||| || || ||
Sbjct: 1014 cgcgtgcggcgccatccctcccctcgtcgcgctgctctccgcgggctccacccgcggcaa 1073

                                                                        
Query: 182  gaaggacgcgctcaccacgctctaccgtctctgctcggcgcgccggaacaaagagcgtgc 241
            ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 1074 gaaggacgcgctcaccacgctctaccggctctgctcggcgcgccggaacaaggagcgcgc 1133

                                                                        
Query: 242  tgtcagcgcgggagccgtcgtgccgctcgtgcacctcatcggcgagcgcggtactgggac 301
             |||||||| || ||||||||||||||| | |||||| |||||||||| || |  |||||
Sbjct: 1134 ggtcagcgccggcgccgtcgtgccgctcatccacctcgtcggcgagcgtggcagcgggac 1193

                                                                        
Query: 302  atcggagaaggcaatggtggttcttgccagccttgcgagcatagccgagggccgcgatgc 361
             |||||||||||||||||||| || |||||||| ||| |||| | |||||||||||| ||
Sbjct: 1194 gtcggagaaggcaatggtggtcctcgccagcctcgcgggcatcgtcgagggccgcgacgc 1253

                                                                        
Query: 362  tgtggtggaagccggtgggatacccgcactggttgagaccatcgaggacggtccggcgag 421
             |||||||| || || |||||||| || || || ||||||||||||||||| ||||||||
Sbjct: 1254 cgtggtggaggctggcgggataccggcgcttgtcgagaccatcgaggacggcccggcgag 1313

                                                                        
Query: 422  ggagaaggagttcgccgtggtcgctctgctgcagctgtgctccgagtgctccagcaaccg 481
            ||||| ||||||||||||||| || ||||||||||| |||||||||||| || |||||||
Sbjct: 1314 ggagagggagttcgccgtggtggcgctgctgcagctctgctccgagtgcccccgcaaccg 1373

                                                                        
Query: 482  tgcgcttctcgttcgagaaggggccatcccaccccttgttgcgctctcacagtccggctc 541
             |||||||| || || || || ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 1374 cgcgcttcttgtccgtgagggcgccatcccaccgcttgtcgcgctctcgcagtccggctc 1433

                                                                        
Query: 542  tgctcgtgccaagcacaaggccgagactttgctaggttacttgcgcgagcagcggcaagg 601
            ||| ||||||||||||||||| || |||||||| || ||  | |||||||| ||||||||
Sbjct: 1434 tgcccgtgccaagcacaaggctgaaactttgcttgggtatctccgcgagcaacggcaagg 1493



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>dbj|AK058404.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-B09, full
            insert sequence
          Length = 1709

 Score =  618 bits (312), Expect = e-174
 Identities = 528/600 (88%)
 Strand = Plus / Plus

                                                                        
Query: 2    ggcgggcgccatcaagccgctcgtctacgcgctgcggaccgggacggcctccgccaagca 61
            |||||| ||||||||||||||||| |||||||||||||| || || || || ||||||||
Sbjct: 894  ggcgggggccatcaagccgctcgtgtacgcgctgcggacgggcaccgcgtcggccaagca 953

                                                                        
Query: 62   gaatgccgcctgcgcgctgctcagcttgtcgggcatcgaggagaaccgcgccaccatcgg 121
            ||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 954  gaacgccgcgtgcgcgctgctcagcctctcgggcatcgaggagaaccgcgccaccatcgg 1013

                                                                        
Query: 122  cgcgtgtggcgccatcgcgccgctcgtcgcgctgctctccgcgggctccactcggggaaa 181
            |||||| ||||||||| | || ||||||||||| ||||||||||||||||| || || ||
Sbjct: 1014 cgcgtgcggcgccatccctcccctcgtcgcgctactctccgcgggctccacccgcggcaa 1073

                                                                        
Query: 182  gaaggacgcgctcaccacgctctaccgtctctgctcggcgcgccggaacaaagagcgtgc 241
            ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 1074 gaaggacgcgctcaccacgctctaccggctctgctcggcgcgccggaacaaggagcgcgc 1133

                                                                        
Query: 242  tgtcagcgcgggagccgtcgtgccgctcgtgcacctcatcggcgagcgcggtactgggac 301
             |||||||| || ||||||||||||||| | |||||| |||||||||| || |  |||||
Sbjct: 1134 ggtcagcgccggcgccgtcgtgccgctcatccacctcgtcggcgagcgtggcagcgggac 1193

                                                                        
Query: 302  atcggagaaggcaatggtggttcttgccagccttgcgagcatagccgagggccgcgatgc 361
             ||||||||||||||||||||||| |||||||| ||| |||| | |||||||||||| ||
Sbjct: 1194 gtcggagaaggcaatggtggttctcgccagcctcgcgggcatcgtcgagggccgcgacgc 1253

                                                                        
Query: 362  tgtggtggaagccggtgggatacccgcactggttgagaccatcgaggacggtccggcgag 421
             |||||||| || || |||||||| || || || ||||||||||||||||| ||||||||
Sbjct: 1254 cgtggtggaggctggcgggataccggcgcttgtcgagaccatcgaggacggcccggcgag 1313

                                                                        
Query: 422  ggagaaggagttcgccgtggtcgctctgctgcagctgtgctccgagtgctccagcaaccg 481
            ||||| ||||||||||||||| || ||||||||||| |||||||||||| || |||||||
Sbjct: 1314 ggagagggagttcgccgtggtggcgctgctgcagctctgctccgagtgcccccgcaaccg 1373

                                                                        
Query: 482  tgcgcttctcgttcgagaaggggccatcccaccccttgttgcgctctcacagtccggctc 541
             |||||||| || || || || ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 1374 cgcgcttcttgtccgtgagggcgccatcccaccgcttgtcgcgctctcgcagtccggctc 1433

                                                                        
Query: 542  tgctcgtgccaagcacaaggccgagactttgctaggttacttgcgcgagcagcggcaagg 601
            ||| ||||||||||||||||| || |||||||| || ||  | |||||||| ||||||||
Sbjct: 1434 tgcccgtgccaagcacaaggctgaaactttgcttgggtatctccgcgagcaacggcaagg 1493



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  603 bits (304), Expect = e-169
 Identities = 496/560 (88%)
 Strand = Plus / Plus

                                                                            
Query: 2        ggcgggcgccatcaagccgctcgtctacgcgctgcggaccgggacggcctccgccaagca 61
                |||||| ||||||||||||||||| |||||||||||||| || || || || ||||||||
Sbjct: 23669086 ggcgggggccatcaagccgctcgtgtacgcgctgcggacgggcaccgcgtcggccaagca 23669145

                                                                            
Query: 62       gaatgccgcctgcgcgctgctcagcttgtcgggcatcgaggagaaccgcgccaccatcgg 121
                ||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 23669146 gaacgccgcgtgcgcgctgctcagcctctcgggcatcgaggagaaccgcgccaccatcgg 23669205

                                                                            
Query: 122      cgcgtgtggcgccatcgcgccgctcgtcgcgctgctctccgcgggctccactcggggaaa 181
                |||||| ||||||||| | || ||||||||||||||||||||||||||||| || || ||
Sbjct: 23669206 cgcgtgcggcgccatccctcccctcgtcgcgctgctctccgcgggctccacccgcggcaa 23669265

                                                                            
Query: 182      gaaggacgcgctcaccacgctctaccgtctctgctcggcgcgccggaacaaagagcgtgc 241
                ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 23669266 gaaggacgcgctcaccacgctctaccggctctgctcggcgcgccggaacaaggagcgcgc 23669325

                                                                            
Query: 242      tgtcagcgcgggagccgtcgtgccgctcgtgcacctcatcggcgagcgcggtactgggac 301
                 |||||||| || ||||||||||||||| | |||||| |||||||||| || |  |||||
Sbjct: 23669326 ggtcagcgccggcgccgtcgtgccgctcatccacctcgtcggcgagcgtggcagcgggac 23669385

                                                                            
Query: 302      atcggagaaggcaatggtggttcttgccagccttgcgagcatagccgagggccgcgatgc 361
                 |||||||||||||||||||| || |||||||| ||| |||| | |||||||||||| ||
Sbjct: 23669386 gtcggagaaggcaatggtggtcctcgccagcctcgcgggcatcgtcgagggccgcgacgc 23669445

                                                                            
Query: 362      tgtggtggaagccggtgggatacccgcactggttgagaccatcgaggacggtccggcgag 421
                 |||||||| || || |||||||| || || || ||||||||||||||||| ||||||||
Sbjct: 23669446 cgtggtggaggctggcgggataccggcgcttgtcgagaccatcgaggacggcccggcgag 23669505

                                                                            
Query: 422      ggagaaggagttcgccgtggtcgctctgctgcagctgtgctccgagtgctccagcaaccg 481
                ||||| ||||||||||||||| || ||||||||||| |||||||||||| || |||||||
Sbjct: 23669506 ggagagggagttcgccgtggtggcgctgctgcagctctgctccgagtgcccccgcaaccg 23669565

                                                                            
Query: 482      tgcgcttctcgttcgagaaggggccatcccaccccttgttgcgctctcacagtccggctc 541
                 |||||||| || || || || ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 23669566 cgcgcttcttgtccgtgagggcgccatcccaccgcttgtcgcgctctcgcagtccggctc 23669625

                                    
Query: 542      tgctcgtgccaagcacaagg 561
                ||| ||||||||||||||||
Sbjct: 23669626 tgcccgtgccaagcacaagg 23669645



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>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1060_D03
          Length = 102178

 Score =  603 bits (304), Expect = e-169
 Identities = 496/560 (88%)
 Strand = Plus / Plus

                                                                         
Query: 2     ggcgggcgccatcaagccgctcgtctacgcgctgcggaccgggacggcctccgccaagca 61
             |||||| ||||||||||||||||| |||||||||||||| || || || || ||||||||
Sbjct: 13700 ggcgggggccatcaagccgctcgtgtacgcgctgcggacgggcaccgcgtcggccaagca 13759

                                                                         
Query: 62    gaatgccgcctgcgcgctgctcagcttgtcgggcatcgaggagaaccgcgccaccatcgg 121
             ||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 13760 gaacgccgcgtgcgcgctgctcagcctctcgggcatcgaggagaaccgcgccaccatcgg 13819

                                                                         
Query: 122   cgcgtgtggcgccatcgcgccgctcgtcgcgctgctctccgcgggctccactcggggaaa 181
             |||||| ||||||||| | || ||||||||||||||||||||||||||||| || || ||
Sbjct: 13820 cgcgtgcggcgccatccctcccctcgtcgcgctgctctccgcgggctccacccgcggcaa 13879

                                                                         
Query: 182   gaaggacgcgctcaccacgctctaccgtctctgctcggcgcgccggaacaaagagcgtgc 241
             ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 13880 gaaggacgcgctcaccacgctctaccggctctgctcggcgcgccggaacaaggagcgcgc 13939

                                                                         
Query: 242   tgtcagcgcgggagccgtcgtgccgctcgtgcacctcatcggcgagcgcggtactgggac 301
              |||||||| || ||||||||||||||| | |||||| |||||||||| || |  |||||
Sbjct: 13940 ggtcagcgccggcgccgtcgtgccgctcatccacctcgtcggcgagcgtggcagcgggac 13999

                                                                         
Query: 302   atcggagaaggcaatggtggttcttgccagccttgcgagcatagccgagggccgcgatgc 361
              |||||||||||||||||||| || |||||||| ||| |||| | |||||||||||| ||
Sbjct: 14000 gtcggagaaggcaatggtggtcctcgccagcctcgcgggcatcgtcgagggccgcgacgc 14059

                                                                         
Query: 362   tgtggtggaagccggtgggatacccgcactggttgagaccatcgaggacggtccggcgag 421
              |||||||| || || |||||||| || || || ||||||||||||||||| ||||||||
Sbjct: 14060 cgtggtggaggctggcgggataccggcgcttgtcgagaccatcgaggacggcccggcgag 14119

                                                                         
Query: 422   ggagaaggagttcgccgtggtcgctctgctgcagctgtgctccgagtgctccagcaaccg 481
             ||||| ||||||||||||||| || ||||||||||| |||||||||||| || |||||||
Sbjct: 14120 ggagagggagttcgccgtggtggcgctgctgcagctctgctccgagtgcccccgcaaccg 14179

                                                                         
Query: 482   tgcgcttctcgttcgagaaggggccatcccaccccttgttgcgctctcacagtccggctc 541
              |||||||| || || || || ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 14180 cgcgcttcttgtccgtgagggcgccatcccaccgcttgtcgcgctctcgcagtccggctc 14239

                                 
Query: 542   tgctcgtgccaagcacaagg 561
             ||| ||||||||||||||||
Sbjct: 14240 tgcccgtgccaagcacaagg 14259



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>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1127_E01
          Length = 123787

 Score =  603 bits (304), Expect = e-169
 Identities = 496/560 (88%)
 Strand = Plus / Plus

                                                                          
Query: 2      ggcgggcgccatcaagccgctcgtctacgcgctgcggaccgggacggcctccgccaagca 61
              |||||| ||||||||||||||||| |||||||||||||| || || || || ||||||||
Sbjct: 121527 ggcgggggccatcaagccgctcgtgtacgcgctgcggacgggcaccgcgtcggccaagca 121586

                                                                          
Query: 62     gaatgccgcctgcgcgctgctcagcttgtcgggcatcgaggagaaccgcgccaccatcgg 121
              ||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 121587 gaacgccgcgtgcgcgctgctcagcctctcgggcatcgaggagaaccgcgccaccatcgg 121646

                                                                          
Query: 122    cgcgtgtggcgccatcgcgccgctcgtcgcgctgctctccgcgggctccactcggggaaa 181
              |||||| ||||||||| | || ||||||||||||||||||||||||||||| || || ||
Sbjct: 121647 cgcgtgcggcgccatccctcccctcgtcgcgctgctctccgcgggctccacccgcggcaa 121706

                                                                          
Query: 182    gaaggacgcgctcaccacgctctaccgtctctgctcggcgcgccggaacaaagagcgtgc 241
              ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 121707 gaaggacgcgctcaccacgctctaccggctctgctcggcgcgccggaacaaggagcgcgc 121766

                                                                          
Query: 242    tgtcagcgcgggagccgtcgtgccgctcgtgcacctcatcggcgagcgcggtactgggac 301
               |||||||| || ||||||||||||||| | |||||| |||||||||| || |  |||||
Sbjct: 121767 ggtcagcgccggcgccgtcgtgccgctcatccacctcgtcggcgagcgtggcagcgggac 121826

                                                                          
Query: 302    atcggagaaggcaatggtggttcttgccagccttgcgagcatagccgagggccgcgatgc 361
               |||||||||||||||||||| || |||||||| ||| |||| | |||||||||||| ||
Sbjct: 121827 gtcggagaaggcaatggtggtcctcgccagcctcgcgggcatcgtcgagggccgcgacgc 121886

                                                                          
Query: 362    tgtggtggaagccggtgggatacccgcactggttgagaccatcgaggacggtccggcgag 421
               |||||||| || || |||||||| || || || ||||||||||||||||| ||||||||
Sbjct: 121887 cgtggtggaggctggcgggataccggcgcttgtcgagaccatcgaggacggcccggcgag 121946

                                                                          
Query: 422    ggagaaggagttcgccgtggtcgctctgctgcagctgtgctccgagtgctccagcaaccg 481
              ||||| ||||||||||||||| || ||||||||||| |||||||||||| || |||||||
Sbjct: 121947 ggagagggagttcgccgtggtggcgctgctgcagctctgctccgagtgcccccgcaaccg 122006

                                                                          
Query: 482    tgcgcttctcgttcgagaaggggccatcccaccccttgttgcgctctcacagtccggctc 541
               |||||||| || || || || ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 122007 cgcgcttcttgtccgtgagggcgccatcccaccgcttgtcgcgctctcgcagtccggctc 122066

                                  
Query: 542    tgctcgtgccaagcacaagg 561
              ||| ||||||||||||||||
Sbjct: 122067 tgcccgtgccaagcacaagg 122086



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>ref|NM_188926.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1758

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 98   cgaggagaaccgcgccaccatcggcg 123
            |||||||||||||||| |||||||||
Sbjct: 1059 cgaggagaaccgcgccgccatcggcg 1084



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>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete
             sequence
          Length = 132981

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 129   ggcgccatcgcgccgctcgtcgcgct 154
             ||||||||| ||||||||||||||||
Sbjct: 84975 ggcgccatcccgccgctcgtcgcgct 85000



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 129      ggcgccatcgcgccgctcgtcgcgct 154
                ||||||||| ||||||||||||||||
Sbjct: 18180370 ggcgccatcccgccgctcgtcgcgct 18180395



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>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 255    gccgtcgtgccgctcgtgcacc 276
              ||||||||||||||||||||||
Sbjct: 210395 gccgtcgtgccgctcgtgcacc 210416



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 129      ggcgccatcgcgccgctcgtcgcgctgctc 158
                ||||||||| |||||||||||||| |||||
Sbjct: 14884111 ggcgccatcccgccgctcgtcgcgatgctc 14884140



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 98       cgaggagaaccgcgccaccatcggcg 123
                |||||||||||||||| |||||||||
Sbjct: 20189188 cgaggagaaccgcgccgccatcggcg 20189163



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 129      ggcgccatcgcgccgctcgtcgcgct 154
                ||||||||| ||||||||||||||||
Sbjct: 18173911 ggcgccatcccgccgctcgtcgcgct 18173936



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>dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0014G10
          Length = 164147

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 129   ggcgccatcgcgccgctcgtcgcgctgctc 158
             ||||||||| |||||||||||||| |||||
Sbjct: 92450 ggcgccatcccgccgctcgtcgcgatgctc 92479



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>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0077M12
          Length = 145337

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 98    cgaggagaaccgcgccaccatcggcg 123
             |||||||||||||||| |||||||||
Sbjct: 54974 cgaggagaaccgcgccgccatcggcg 54949



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>gb|AC116811.15| Mus musculus chromosome 6, clone RP24-356D15, complete sequence
          Length = 150909

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 590   gcagcggcaagggggcggct 609
             ||||||||||||||||||||
Sbjct: 90583 gcagcggcaagggggcggct 90564



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>gb|BC054472.1| Mus musculus hexokinase 2, mRNA (cDNA clone MGC:62607 IMAGE:6465367),
            complete cds
          Length = 5441

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 590  gcagcggcaagggggcggct 609
            ||||||||||||||||||||
Sbjct: 1736 gcagcggcaagggggcggct 1755



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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 135     atcgcgccgctcgtcgcgct 154
               ||||||||||||||||||||
Sbjct: 1755038 atcgcgccgctcgtcgcgct 1755057



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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   tcgcgccgctcgtcgcgctg 155
             ||||||||||||||||||||
Sbjct: 36131 tcgcgccgctcgtcgcgctg 36112



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>ref|NM_013820.1| Mus musculus hexokinase 2 (Hk2), mRNA
          Length = 5496

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 590  gcagcggcaagggggcggct 609
            ||||||||||||||||||||
Sbjct: 1822 gcagcggcaagggggcggct 1841



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>gb|AC122010.3| Mus musculus BAC clone RP24-349I15 from chromosome 8, complete sequence
          Length = 198118

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   gatgctgtggtggaagccgg 376
             ||||||||||||||||||||
Sbjct: 38929 gatgctgtggtggaagccgg 38948



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>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence
          Length = 1471779

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     ccgccaagcagaatgccgcc 71
              ||||||||||||||||||||
Sbjct: 911308 ccgccaagcagaatgccgcc 911327



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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 135     atcgcgccgctcgtcgcgct 154
               ||||||||||||||||||||
Sbjct: 3089931 atcgcgccgctcgtcgcgct 3089950



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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 136     tcgcgccgctcgtcgcgctg 155
               ||||||||||||||||||||
Sbjct: 3866347 tcgcgccgctcgtcgcgctg 3866328



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>emb|AJ238540.1|MMU238540 Mus musculus mRNA for hexokinase II
          Length = 5474

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 590  gcagcggcaagggggcggct 609
            ||||||||||||||||||||
Sbjct: 1760 gcagcggcaagggggcggct 1779



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>dbj|AK145936.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN
            full-length enriched library, clone:I530016N07
            product:hexokinase 2, full insert sequence
          Length = 3397

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 590  gcagcggcaagggggcggct 609
            ||||||||||||||||||||
Sbjct: 1798 gcagcggcaagggggcggct 1817



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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 135     atcgcgccgctcgtcgcgct 154
               ||||||||||||||||||||
Sbjct: 2238557 atcgcgccgctcgtcgcgct 2238576



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>ref|XM_394452.1| PREDICTED: Apis mellifera similar to CG32645-PB (LOC410976), mRNA
          Length = 2436

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 135 atcgcgccgctcgtcgcgctgctc 158
           |||| |||||||||||||||||||
Sbjct: 309 atcgtgccgctcgtcgcgctgctc 286



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 131     cgccatcgcgccgctcgtcgcgct 154
               |||| |||||||||||||||||||
Sbjct: 2708398 cgccgtcgcgccgctcgtcgcgct 2708375



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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    gctcgtcgcgctgctctccg 162
              ||||||||||||||||||||
Sbjct: 505537 gctcgtcgcgctgctctccg 505518



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>gb|AC007305.40| Mus musculus strain 129/SvJ clone mgs1-211l20 map 6, complete
            sequence
          Length = 214840

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 590  gcagcggcaagggggcggct 609
            ||||||||||||||||||||
Sbjct: 2189 gcagcggcaagggggcggct 2170



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>emb|Y11668.1|MMHEXII3 Mus musculus gene for hexokinase II, exon 3-18
          Length = 28646

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 590   gcagcggcaagggggcggct 609
             ||||||||||||||||||||
Sbjct: 15739 gcagcggcaagggggcggct 15758



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>gb|AC156028.2| Mus musculus BAC clone RP23-61A11 from chromosome 8, complete sequence
          Length = 212724

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   gatgctgtggtggaagccgg 376
             ||||||||||||||||||||
Sbjct: 16460 gatgctgtggtggaagccgg 16441



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>gb|AC134525.5| Mus musculus BAC clone RP24-496F7 from 8, complete sequence
          Length = 215900

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   gatgctgtggtggaagccgg 376
             ||||||||||||||||||||
Sbjct: 22868 gatgctgtggtggaagccgg 22887



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>gb|AC153850.3| Mus musculus 6 BAC RP23-81F19 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 194042

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 590    gcagcggcaagggggcggct 609
              ||||||||||||||||||||
Sbjct: 129408 gcagcggcaagggggcggct 129427


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,361,098
Number of Sequences: 3902068
Number of extensions: 3361098
Number of successful extensions: 64310
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62172
Number of HSP's gapped (non-prelim): 2138
length of query: 609
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 586
effective length of database: 17,143,297,704
effective search space: 10045972454544
effective search space used: 10045972454544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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