ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd1k04 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 328 bits (840), Expect(3) = e-110 Identities = 161/165 (97%), Positives = 161/165 (97%) Frame = +3 Query: 6 GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILG 185 GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILG Sbjct: 93 GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILG 152 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM Sbjct: 153 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 212 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRAAP 500 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPT P Sbjct: 213 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLP 257 Score = 80.1 bits (196), Expect(3) = e-110 Identities = 37/38 (97%), Positives = 37/38 (97%) Frame = +1 Query: 487 NVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 600 NVQLPGMYNK ENPRVPIVVTGNDFSTLYAPLIRDGRM Sbjct: 253 NVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRM 290 Score = 32.3 bits (72), Expect(3) = e-110 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = +2 Query: 602 EKFYWAPTRDDR 637 EKFYWAPTRDDR Sbjct: 291 EKFYWAPTRDDR 302
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 314 bits (805), Expect(3) = e-106 Identities = 154/166 (92%), Positives = 159/166 (95%) Frame = +3 Query: 3 DGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLIL 182 DGTHEAVLSSYEY+SQGLR YDFDNTMGGFYIAP+FMDKLVVH+SKNFMTLPNIK+PLIL Sbjct: 93 DGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPSFMDKLVVHISKNFMTLPNIKVPLIL 152 Query: 183 GIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGK 362 GIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN GEPAKLIRQRYREAAD+IKKGK Sbjct: 153 GIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN-GEPAKLIRQRYREAADIIKKGK 211 Query: 363 MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRAAP 500 MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT P Sbjct: 212 MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLP 257 Score = 80.5 bits (197), Expect(3) = e-106 Identities = 36/38 (94%), Positives = 38/38 (100%) Frame = +1 Query: 487 NVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 600 NVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRDGRM Sbjct: 253 NVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRM 290 Score = 32.3 bits (72), Expect(3) = e-106 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = +2 Query: 602 EKFYWAPTRDDR 637 EKFYWAPTRDDR Sbjct: 291 EKFYWAPTRDDR 302
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 313 bits (801), Expect(3) = e-105 Identities = 152/166 (91%), Positives = 158/166 (95%) Frame = +3 Query: 3 DGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLIL 182 DGTHEA+LSSYEY+SQGLRKYDFDNTM G YIAPAFMDKL+VHL+KNFMTLPNIK+PLIL Sbjct: 90 DGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLIL 149 Query: 183 GIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGK 362 GIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN GEPAKLIRQRYREAAD+I KGK Sbjct: 150 GIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN-GEPAKLIRQRYREAADIINKGK 208 Query: 363 MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRAAP 500 MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPT P Sbjct: 209 MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLP 254 Score = 81.6 bits (200), Expect(3) = e-105 Identities = 37/38 (97%), Positives = 38/38 (100%) Frame = +1 Query: 487 NVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 600 NVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRM Sbjct: 250 NVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 287 Score = 30.8 bits (68), Expect(3) = e-105 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +2 Query: 602 EKFYWAPTRDDR 637 EKFYWAPTR+DR Sbjct: 288 EKFYWAPTREDR 299
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 304 bits (778), Expect(3) = e-103 Identities = 146/165 (88%), Positives = 156/165 (94%) Frame = +3 Query: 6 GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILG 185 GTH AV+SSY+Y+SQGLR+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILG Sbjct: 103 GTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILG 162 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKM Sbjct: 163 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKM 222 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRAAP 500 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT P Sbjct: 223 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLP 267 Score = 81.6 bits (200), Expect(3) = e-103 Identities = 37/38 (97%), Positives = 38/38 (100%) Frame = +1 Query: 487 NVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 600 NVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRM Sbjct: 263 NVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 300 Score = 30.8 bits (68), Expect(3) = e-103 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +2 Query: 602 EKFYWAPTRDDR 637 EKFYWAPTR+DR Sbjct: 301 EKFYWAPTREDR 312
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 304 bits (778), Expect(3) = e-103 Identities = 146/165 (88%), Positives = 156/165 (94%) Frame = +3 Query: 6 GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILG 185 GTH AV+SSY+Y+SQGLR+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILG Sbjct: 103 GTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILG 162 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKM Sbjct: 163 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKM 222 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRAAP 500 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT P Sbjct: 223 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLP 267 Score = 81.6 bits (200), Expect(3) = e-103 Identities = 37/38 (97%), Positives = 38/38 (100%) Frame = +1 Query: 487 NVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 600 NVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRM Sbjct: 263 NVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 300 Score = 30.8 bits (68), Expect(3) = e-103 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +2 Query: 602 EKFYWAPTRDDR 637 EKFYWAPTR+DR Sbjct: 301 EKFYWAPTREDR 312
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 306 bits (783), Expect(3) = e-102 Identities = 148/165 (89%), Positives = 155/165 (93%) Frame = +3 Query: 6 GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILG 185 GTH AVLSSYEYVSQGLR+Y+ DN M GFYIAPAFMDKLVVH++KNF+TLPNIK+PLILG Sbjct: 103 GTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILG 162 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 IWGGKGQGKSFQCELV AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKM Sbjct: 163 IWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKM 222 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRAAP 500 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT P Sbjct: 223 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLP 267 Score = 76.6 bits (187), Expect(3) = e-102 Identities = 35/38 (92%), Positives = 36/38 (94%) Frame = +1 Query: 487 NVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 600 NVQLPGMYNKEEN RVPI+ TGNDFSTLYAPLIRDGRM Sbjct: 263 NVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRM 300 Score = 30.8 bits (68), Expect(3) = e-102 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +2 Query: 602 EKFYWAPTRDDR 637 EKFYWAPTR+DR Sbjct: 301 EKFYWAPTREDR 312
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 300 bits (767), Expect(3) = e-101 Identities = 143/165 (86%), Positives = 152/165 (92%) Frame = +3 Query: 6 GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILG 185 GTH AVLSSYEY+S GLR Y +DN + GFYIAPAFMDKL VH+ KNF+TLPNIK+PLILG Sbjct: 100 GTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILG 159 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 +WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKM Sbjct: 160 VWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKM 219 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRAAP 500 CCLFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PT P Sbjct: 220 CCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLP 264 Score = 81.6 bits (200), Expect(3) = e-101 Identities = 37/38 (97%), Positives = 38/38 (100%) Frame = +1 Query: 487 NVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 600 NVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRM Sbjct: 260 NVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 297 Score = 29.6 bits (65), Expect(3) = e-101 Identities = 10/12 (83%), Positives = 12/12 (100%) Frame = +2 Query: 602 EKFYWAPTRDDR 637 +KFYWAPTR+DR Sbjct: 298 DKFYWAPTREDR 309
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 298 bits (762), Expect(3) = e-101 Identities = 145/166 (87%), Positives = 152/166 (91%) Frame = +3 Query: 3 DGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLIL 182 DGTH AVLSSY+Y+SQG + Y+FDN M GFYIA FMDKLVVHLSKNFMTLPNIK+PLIL Sbjct: 98 DGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLIL 157 Query: 183 GIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGK 362 GIWGGKGQGKSFQCELVFAKMGI PIMMSAGELESGNAGEPAKLIRQRYREA+D+IKKGK Sbjct: 158 GIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGK 217 Query: 363 MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRAAP 500 M CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT P Sbjct: 218 MSCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLP 263 Score = 80.5 bits (197), Expect(3) = e-101 Identities = 36/38 (94%), Positives = 38/38 (100%) Frame = +1 Query: 487 NVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 600 NVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRDGRM Sbjct: 259 NVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRM 296 Score = 30.8 bits (68), Expect(3) = e-101 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +2 Query: 602 EKFYWAPTRDDR 637 EKFYWAPTR+DR Sbjct: 297 EKFYWAPTREDR 308
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 293 bits (751), Expect(3) = e-100 Identities = 140/165 (84%), Positives = 154/165 (93%) Frame = +3 Query: 6 GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILG 185 GTH A++SSYEY+S GLR+Y+FDN M G+YIAPAFMDKLVVH++KNFMTLPN+K+PLILG Sbjct: 103 GTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILG 162 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 IWGGKGQGKSFQCELVFAKM I+PIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KGKM Sbjct: 163 IWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKM 222 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRAAP 500 C LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PT P Sbjct: 223 CALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLP 267 Score = 81.6 bits (200), Expect(3) = e-100 Identities = 37/38 (97%), Positives = 38/38 (100%) Frame = +1 Query: 487 NVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 600 NVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRM Sbjct: 263 NVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 300 Score = 30.8 bits (68), Expect(3) = e-100 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +2 Query: 602 EKFYWAPTRDDR 637 EKFYWAPTR+DR Sbjct: 301 EKFYWAPTREDR 312
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 296 bits (758), Expect(3) = 2e-99 Identities = 142/165 (86%), Positives = 152/165 (92%) Frame = +3 Query: 6 GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILG 185 GTH AVL SYEYVSQGLR+Y+ DN + GFYIAPAFMDKLVVH++KNF+ LPNIK+PLILG Sbjct: 107 GTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILG 166 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 IWGGKGQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA++I+KG M Sbjct: 167 IWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNM 226 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRAAP 500 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT P Sbjct: 227 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLP 271 Score = 77.4 bits (189), Expect(3) = 2e-99 Identities = 35/38 (92%), Positives = 37/38 (97%) Frame = +1 Query: 487 NVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 600 NVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRM Sbjct: 267 NVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRM 304 Score = 30.8 bits (68), Expect(3) = 2e-99 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +2 Query: 602 EKFYWAPTRDDR 637 EKFYWAPTR+DR Sbjct: 305 EKFYWAPTREDR 316
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 295 bits (756), Expect(3) = 3e-99 Identities = 140/165 (84%), Positives = 153/165 (92%) Frame = +3 Query: 6 GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILG 185 GTH AVL SYEYVSQGLR+Y+ DNT+ GFYIAP+FMDKLVVH++KNF+ LPNIK+PLILG Sbjct: 107 GTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILG 166 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 +WGGKGQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA++I+KG + Sbjct: 167 VWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNI 226 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRAAP 500 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT P Sbjct: 227 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLP 271 Score = 77.4 bits (189), Expect(3) = 3e-99 Identities = 35/38 (92%), Positives = 37/38 (97%) Frame = +1 Query: 487 NVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 600 NVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRM Sbjct: 267 NVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRM 304 Score = 30.8 bits (68), Expect(3) = 3e-99 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +2 Query: 602 EKFYWAPTRDDR 637 EKFYWAPTR+DR Sbjct: 305 EKFYWAPTREDR 316
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 293 bits (750), Expect(3) = 2e-98 Identities = 140/165 (84%), Positives = 154/165 (93%) Frame = +3 Query: 6 GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILG 185 GTH AV+SS++Y+S GLR+Y+FDN GFYIAPAF+DKLVVH++KNFMTLPNIK+PLILG Sbjct: 107 GTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILG 166 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 +WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA+D+IKKGKM Sbjct: 167 VWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKM 226 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRAAP 500 C LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PT P Sbjct: 227 CVLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLP 271 Score = 77.4 bits (189), Expect(3) = 2e-98 Identities = 35/38 (92%), Positives = 37/38 (97%) Frame = +1 Query: 487 NVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 600 NVQLPGMYNKE+N RVPI+VTGNDFSTLYAPLIRDGRM Sbjct: 267 NVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRM 304 Score = 30.8 bits (68), Expect(3) = 2e-98 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +2 Query: 602 EKFYWAPTRDDR 637 EKFYWAPTR+DR Sbjct: 305 EKFYWAPTREDR 316
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 293 bits (749), Expect(3) = 2e-98 Identities = 138/165 (83%), Positives = 151/165 (91%) Frame = +3 Query: 6 GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILG 185 GTH A+++SYEYVSQ L+ Y DN + GFYIAPAFMDKLVVH++KNF+TLPNIK+PLILG Sbjct: 102 GTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILG 161 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 +WGGKGQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA++I+KG M Sbjct: 162 VWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNM 221 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRAAP 500 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT P Sbjct: 222 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLP 266 Score = 77.4 bits (189), Expect(3) = 2e-98 Identities = 35/38 (92%), Positives = 37/38 (97%) Frame = +1 Query: 487 NVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 600 NVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRM Sbjct: 262 NVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRM 299 Score = 30.8 bits (68), Expect(3) = 2e-98 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +2 Query: 602 EKFYWAPTRDDR 637 EKFYWAPTR+DR Sbjct: 300 EKFYWAPTREDR 311
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 286 bits (731), Expect(3) = 4e-97 Identities = 141/165 (85%), Positives = 150/165 (90%) Frame = +3 Query: 6 GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILG 185 GTH AV+SSYEY+S GLR+ DN GFYIAPAF+DKLVVH++KNFMTLPNIK+PLILG Sbjct: 107 GTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILG 164 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKM Sbjct: 165 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKM 224 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRAAP 500 C LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PT P Sbjct: 225 CALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLP 269 Score = 78.6 bits (192), Expect(3) = 4e-97 Identities = 36/38 (94%), Positives = 37/38 (97%) Frame = +1 Query: 487 NVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 600 NVQLPGMYNKEEN RVPI+VTGNDFSTLYAPLIRDGRM Sbjct: 265 NVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRM 302 Score = 32.3 bits (72), Expect(3) = 4e-97 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = +2 Query: 602 EKFYWAPTRDDR 637 EKFYWAPTRDDR Sbjct: 303 EKFYWAPTRDDR 314
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 289 bits (739), Expect(3) = 6e-97 Identities = 139/165 (84%), Positives = 149/165 (90%) Frame = +3 Query: 6 GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILG 185 GTH + SS+EY SQGLRKYD DN +G FYIAPAFMDKLVVH++KNF+ LPNIKIPLILG Sbjct: 101 GTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILG 160 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 +WGGKGQGKSFQCELVFAK+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKM Sbjct: 161 VWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKM 220 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRAAP 500 C LFINDL+ GAGRMGGTTQYTVNNQMVNATLMNIAD PT P Sbjct: 221 CALFINDLEPGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLP 265 Score = 76.3 bits (186), Expect(3) = 6e-97 Identities = 34/38 (89%), Positives = 37/38 (97%) Frame = +1 Query: 487 NVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 600 NVQLPGMYNK++N RVPI+VTGNDFSTLYAPLIRDGRM Sbjct: 261 NVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRM 298 Score = 30.8 bits (68), Expect(3) = 6e-97 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +2 Query: 602 EKFYWAPTRDDR 637 EKFYWAPTR+DR Sbjct: 299 EKFYWAPTREDR 310
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 253 bits (647), Expect(3) = 1e-83 Identities = 123/165 (74%), Positives = 140/165 (84%) Frame = +3 Query: 6 GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILG 185 GTH AVLSS EY+SQ + F+N GFYI+PAF+DK+ +H++KNFM LP IK+PLILG Sbjct: 78 GTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILG 135 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 IWGGKGQGK+FQC L + K+GI PI+MSAGELESGNAGEPAKLIR RYREA+D+IKKG+M Sbjct: 136 IWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLIRTRYREASDIIKKGRM 195 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRAAP 500 C LFINDLDAGAGRMG TTQYTVNNQMVNATLMNIAD PT P Sbjct: 196 CSLFINDLDAGAGRMGDTTQYTVNNQMVNATLMNIADNPTNVQLP 240 Score = 70.9 bits (172), Expect(3) = 1e-83 Identities = 33/38 (86%), Positives = 34/38 (89%) Frame = +1 Query: 487 NVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 600 NVQLPG+Y EE PRVPIV TGNDFSTLYAPLIRDGRM Sbjct: 236 NVQLPGVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGRM 273 Score = 27.3 bits (59), Expect(3) = 1e-83 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = +2 Query: 602 EKFYWAPTRDDR 637 EK+YW PTR+DR Sbjct: 274 EKYYWNPTREDR 285
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 186 bits (473), Expect(3) = 3e-61 Identities = 90/138 (65%), Positives = 110/138 (79%), Gaps = 1/138 (0%) Frame = +3 Query: 90 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 269 +YIAP F+DKL VH++KNF+ +P +++PLILGI G KG+GK+FQCEL F KMGI ++S Sbjct: 3 YYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLIS 62 Query: 270 AGELESGNAGEPAKLIRQRYREAADMIK-KGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 446 GELES +AG+PA+LIR RYRE A++IK +GKMC L INDLDAGAGR TQYTVN Q+ Sbjct: 63 GGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQL 122 Query: 447 VNATLMNIADAPTQRAAP 500 VNATLMNIAD PT P Sbjct: 123 VNATLMNIADNPTDVQLP 140 Score = 62.4 bits (150), Expect(3) = 3e-61 Identities = 29/38 (76%), Positives = 32/38 (84%) Frame = +1 Query: 487 NVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 600 +VQLPG Y+ RVPI+VTGNDFSTLYAPLIRDGRM Sbjct: 136 DVQLPGSYDSNPIRRVPIIVTGNDFSTLYAPLIRDGRM 173 Score = 27.3 bits (59), Expect(3) = 3e-61 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = +2 Query: 602 EKFYWAPTRDDR 637 EKFYW P RDD+ Sbjct: 174 EKFYWEPNRDDK 185
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 187 bits (474), Expect(3) = 2e-60 Identities = 90/138 (65%), Positives = 110/138 (79%), Gaps = 1/138 (0%) Frame = +3 Query: 90 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 269 +YIAP F+DKL VH++KNF+ LP +++PLILGI G KG+GK+FQCEL F KMG+ ++S Sbjct: 3 YYIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLIS 62 Query: 270 AGELESGNAGEPAKLIRQRYREAADMIK-KGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 446 GELES +AG+PA+LIR RYRE A++IK +GKMC L INDLDAGAGR TQYTVN Q+ Sbjct: 63 GGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQL 122 Query: 447 VNATLMNIADAPTQRAAP 500 VNATLMNIAD PT P Sbjct: 123 VNATLMNIADNPTDVQLP 140 Score = 62.0 bits (149), Expect(3) = 2e-60 Identities = 29/38 (76%), Positives = 32/38 (84%) Frame = +1 Query: 487 NVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 600 +VQLPG Y+ RVPI+VTGNDFSTLYAPLIRDGRM Sbjct: 136 DVQLPGSYDSTPLRRVPIIVTGNDFSTLYAPLIRDGRM 173 Score = 25.0 bits (53), Expect(3) = 2e-60 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +2 Query: 602 EKFYWAPTRDDR 637 EKFYW P RD++ Sbjct: 174 EKFYWEPHRDEK 185
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 44.7 bits (104), Expect = 2e-04 Identities = 30/104 (28%), Positives = 51/104 (49%) Frame = +3 Query: 159 NIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 338 NIK P + ++G G GK+ + V + N I + EL S GE K +R+ +R+A Sbjct: 485 NIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKA 544 Query: 339 ADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 + C +F +++D+ A R GG V ++V+ L + Sbjct: 545 RQVAP----CVIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTEL 584
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 43.1 bits (100), Expect = 7e-04 Identities = 28/103 (27%), Positives = 55/103 (53%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 IK P + ++G G GK+ V A +G+N + + + + GE A++IR+ + A Sbjct: 163 IKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYA- 221 Query: 342 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 K+ + C +F++++DA GR ++ T ++ + TLM + Sbjct: 222 ---KEHEPCVIFMDEIDAIGGRR--FSEGTSADREIQRTLMEL 259
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 38.9 bits (89), Expect = 0.013 Identities = 26/102 (25%), Positives = 47/102 (46%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 +K P L ++G G GK+ V + + I++S + +AGE K++R+ + EA+ Sbjct: 53 LKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEAS 112 Query: 342 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMN 467 K +FI+++D R + V TLM+ Sbjct: 113 SHAVSDKPSVIFIDEIDVLCPRRDARREQDVRIASQLFTLMD 154
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 38.5 bits (88), Expect = 0.017 Identities = 26/95 (27%), Positives = 47/95 (49%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ + V + + + + EL GE AKL+R ++ + K+ Sbjct: 187 LYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFK----LAKEKSP 242 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 C +FI+++DA A + T T ++ V TLM + Sbjct: 243 CIIFIDEIDAVASKR--TESLTGGDREVQRTLMQL 275
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 38.5 bits (88), Expect = 0.017 Identities = 29/107 (27%), Positives = 50/107 (46%) Frame = +3 Query: 150 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 329 T ++ P + ++G G GK+ + V + N I + +L S GE K IRQ + Sbjct: 489 TRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTF 548 Query: 330 REAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 R+A + +F ++LD+ A G T V+ ++VN L + Sbjct: 549 RKARQVAP----TVIFFDELDSLAPGRGQTGGNNVSERVVNQLLTEL 591
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 38.1 bits (87), Expect = 0.022 Identities = 24/95 (25%), Positives = 49/95 (51%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ V +++ N + + + + GE A+LIR+ + A D + Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 C +F++++DA GR ++ T ++ + TLM + Sbjct: 228 CIIFMDEIDAIGGRR--FSEGTSADREIQRTLMEL 260
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 38.1 bits (87), Expect = 0.022 Identities = 24/95 (25%), Positives = 49/95 (51%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ V +++ N + + + + GE A+LIR+ + A D + Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 C +F++++DA GR ++ T ++ + TLM + Sbjct: 228 CIIFMDEIDAIGGRR--FSEGTSADREIQRTLMEL 260
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 38.1 bits (87), Expect = 0.022 Identities = 24/95 (25%), Positives = 49/95 (51%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ V +++ N + + + + GE A+LIR+ + A D + Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 C +F++++DA GR ++ T ++ + TLM + Sbjct: 228 CIIFMDEIDAIGGRR--FSEGTSADREIQRTLMEL 260
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 37.4 bits (85), Expect = 0.038 Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 2/115 (1%) Frame = +3 Query: 123 VVHLSKN--FMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 296 VV KN T+ K+P + + G G GK+ V + + S E + Sbjct: 354 VVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFV 413 Query: 297 GEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATL 461 G A IR +REA K C +FI++LD+ G+ + + + Q +N L Sbjct: 414 GVGASRIRNLFREA----KANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLL 464
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 37.0 bits (84), Expect = 0.050 Identities = 21/73 (28%), Positives = 40/73 (54%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GKS+ + V + G +S+ +L S GE +L+RQ + +M ++ K Sbjct: 167 LYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLF----EMAREQKP 222 Query: 366 CCLFINDLDAGAG 404 +FI+++D+ G Sbjct: 223 SIIFIDEIDSLCG 235
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 37.0 bits (84), Expect = 0.050 Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 1/116 (0%) Frame = +3 Query: 75 NTMGGFYIAPAFMDKLVVHLSK-NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 251 N + G A +++V L K T KIP + + G G GK+ + + + G+ Sbjct: 173 NDVAGVDEAKEEFEEVVSFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGV 232 Query: 252 NPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGT 419 +S E G A +R +++A K+ C +FI+++DA GR GT Sbjct: 233 PFFSISGSEFVEMFVGVGASRVRDLFKKA----KENSPCIVFIDEIDA-VGRQRGT 283
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 37.0 bits (84), Expect = 0.050 Identities = 26/99 (26%), Positives = 43/99 (43%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 K+P + + G G GK+ V + + S E + G A IR +REA Sbjct: 312 KLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREA-- 369 Query: 345 MIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATL 461 K C +FI++LD+ G+ + + + Q +N L Sbjct: 370 --KANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLL 406
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 36.6 bits (83), Expect = 0.065 Identities = 22/76 (28%), Positives = 39/76 (51%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GKS+ + V + +S+ +L S GE KL++Q + M ++ K Sbjct: 171 LYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFA----MARENKP 226 Query: 366 CCLFINDLDAGAGRMG 413 +FI+++DA G G Sbjct: 227 SIIFIDEVDALTGTRG 242
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 36.2 bits (82), Expect = 0.085 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 7/102 (6%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + ++G G GK+ V + G+ +S + G A +R + +A Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQA-- 251 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 449 K+ C +F++++DA GAG GG + T+N +V Sbjct: 252 --KQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLV 291
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 36.2 bits (82), Expect = 0.085 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 7/102 (6%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + ++G G GK+ V + G+ +S + G A +R + +A Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQA-- 251 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 449 K+ C +F++++DA GAG GG + T+N +V Sbjct: 252 --KQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLV 291
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 35.8 bits (81), Expect = 0.11 Identities = 24/85 (28%), Positives = 39/85 (45%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + ++G G GK+ V + G+ +S + G A R R+ D Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGA----SRVRDLFD 249 Query: 345 MIKKGKMCCLFINDLDAGAGRMGGT 419 K+ C +F++++DA GR GT Sbjct: 250 QAKQNSPCIIFVDEIDA-VGRQRGT 273
>RECA_IDILO (Q5QUB8) Protein recA (Recombinase A)| Length = 372 Score = 35.8 bits (81), Expect = 0.11 Identities = 20/68 (29%), Positives = 31/68 (45%) Frame = +3 Query: 228 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 407 +V + + P GE+ + G A+L+ Q R+ IKK C+FIN + G Sbjct: 141 IVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTSNIKKSNTMCIFINQIRMKIGV 200 Query: 408 MGGTTQYT 431 M G + T Sbjct: 201 MFGNPETT 208
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 35.8 bits (81), Expect = 0.11 Identities = 27/93 (29%), Positives = 45/93 (48%) Frame = +3 Query: 192 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 371 G G GK+ + V ++ + I M+ EL GE AKL+R ++ A D + Sbjct: 190 GPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARD----HEPAV 245 Query: 372 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 +FI+++DA A + T T + V T+M + Sbjct: 246 VFIDEIDAIASKR--TDSKTSGDAEVQRTMMQL 276
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 32.7 bits (73), Expect(2) = 0.14 Identities = 20/78 (25%), Positives = 39/78 (50%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 I+ P + ++G G GK+ A+ + ++ +L G+ AKL+ R+A Sbjct: 207 IRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAF 262 Query: 342 DMIKKGKMCCLFINDLDA 395 + K+ C +FI+++DA Sbjct: 263 QLAKEKSPCIIFIDEIDA 280 Score = 21.6 bits (44), Expect(2) = 0.14 Identities = 13/45 (28%), Positives = 20/45 (44%) Frame = +1 Query: 493 QLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMGEVLLGSHP 627 QL G + E R+ ++ N L L+R GR+ + HP Sbjct: 306 QLDGFSSDE---RIKVIAATNRADILDPALMRSGRLDRKIEFPHP 347
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 35.4 bits (80), Expect = 0.14 Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 1/116 (0%) Frame = +3 Query: 75 NTMGGFYIAPAFMDKLVVHLSK-NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 251 N + G A ++V L + T KIP + + G G GK+ + + + G+ Sbjct: 173 NDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGV 232 Query: 252 NPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGT 419 +S E G A +R +++A D C +FI+++DA GR GT Sbjct: 233 PFFSISGSEFVEMFVGVGASRVRDLFKKAKD----NAPCIVFIDEIDA-VGRQRGT 283
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 35.4 bits (80), Expect = 0.14 Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 5/97 (5%) Frame = +3 Query: 150 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 329 T KIP + + G G GK+ + + + G+ +S E G A +R + Sbjct: 198 TAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 257 Query: 330 REAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQ 425 ++A K+ C +FI+++DA GAG GG + Sbjct: 258 KKA----KENAPCLIFIDEIDAVGRQRGAGIGGGNDE 290
>KAD5_MOUSE (Q920P5) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) Length = 193 Score = 35.4 bits (80), Expect = 0.14 Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Frame = +3 Query: 177 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADM 347 I+ + GG G GK QCE + K G +S GEL E + E +KLIR E D+ Sbjct: 9 IIFLMGGPGSGKGTQCEKLAEKYGFT--HLSTGELLRQELTSESERSKLIRD-IMERGDL 65 Query: 348 IKKGKMCCLFINDLDAGAGRMGG 416 + G + L + A G G Sbjct: 66 VPSGVVLELLKEAMVASLGNTKG 88
>KAD5_HUMAN (Q9Y6K8) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) Length = 198 Score = 35.4 bits (80), Expect = 0.14 Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Frame = +3 Query: 177 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADM 347 I+ I GG G GK QCE + K G +S GEL E + E +KLIR E D+ Sbjct: 13 IIFIIGGPGSGKGTQCEKLVEKYGFT--HLSTGELLREELASESERSKLIRD-IMERGDL 69 Query: 348 IKKGKMCCLFINDLDAGAGRMGG 416 + G + L + A G G Sbjct: 70 VPSGIVLELLKEAMVASLGDTRG 92
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 35.4 bits (80), Expect = 0.14 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 4/91 (4%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ V A+ G+N I + E+ + G + +R+ + A + K Sbjct: 838 LYGYPGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERA----QAAKP 893 Query: 366 CCLFINDLDAGAGRMG----GTTQYTVNNQM 446 C LF ++ D+ A + G G T VN + Sbjct: 894 CILFFDEFDSIAPKRGHDSTGVTDRVVNQML 924
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 35.0 bits (79), Expect = 0.19 Identities = 24/100 (24%), Positives = 47/100 (47%) Frame = +3 Query: 192 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 371 G G GK+ + ++ + I +SA + SG +GE K IR + EA + C Sbjct: 246 GPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAP----CL 301 Query: 372 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQR 491 +F +++DA + G Q + ++V L ++ + ++ Sbjct: 302 VFFDEIDAITPKRDGGAQREMERRIVAQLLTSMDELTMEK 341 Score = 34.3 bits (77), Expect = 0.32 Identities = 26/95 (27%), Positives = 44/95 (46%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 +WG G GK+ + V + N I + EL + GE + IRQ + A + Sbjct: 572 LWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVP---- 627 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 C +F ++LDA R T+ ++++VN L + Sbjct: 628 CVIFFDELDALVPRR-DTSLSESSSRVVNTLLTEL 661
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 35.0 bits (79), Expect = 0.19 Identities = 31/111 (27%), Positives = 54/111 (48%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 235 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 293 Query: 342 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRA 494 +K +FI++LDA A + T V ++V + L+ + D QRA Sbjct: 294 ---EKNAPAIIFIDELDAIAPKR-EKTHGEVERRIV-SQLLTLMDGLKQRA 339
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 35.0 bits (79), Expect = 0.19 Identities = 31/111 (27%), Positives = 54/111 (48%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 342 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRA 494 +K +FI++LDA A + T V ++V + L+ + D QRA Sbjct: 293 ---EKNAPAIIFIDELDAIAPKR-EKTHGEVERRIV-SQLLTLMDGLKQRA 338
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 35.0 bits (79), Expect = 0.19 Identities = 31/111 (27%), Positives = 54/111 (48%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 342 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRA 494 +K +FI++LDA A + T V ++V + L+ + D QRA Sbjct: 293 ---EKNAPAIIFIDELDAIAPKR-EKTHGEVERRIV-SQLLTLMDGLKQRA 338
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 35.0 bits (79), Expect = 0.19 Identities = 31/111 (27%), Positives = 54/111 (48%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 342 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRA 494 +K +FI++LDA A + T V ++V + L+ + D QRA Sbjct: 293 ---EKNAPAIIFIDELDAIAPKR-EKTHGEVERRIV-SQLLTLMDGLKQRA 338
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 35.0 bits (79), Expect = 0.19 Identities = 31/111 (27%), Positives = 54/111 (48%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 342 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRA 494 +K +FI++LDA A + T V ++V + L+ + D QRA Sbjct: 293 ---EKNAPAIIFIDELDAIAPKR-EKTHGEVERRIV-SQLLTLMDGLKQRA 338
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 32.0 bits (71), Expect(2) = 0.24 Identities = 18/70 (25%), Positives = 35/70 (50%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ A+ + ++ +L G+ AKL+ R+A + K+ Sbjct: 210 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAFQLAKEKAP 265 Query: 366 CCLFINDLDA 395 C +FI+++DA Sbjct: 266 CIIFIDEIDA 275 Score = 21.6 bits (44), Expect(2) = 0.24 Identities = 13/45 (28%), Positives = 20/45 (44%) Frame = +1 Query: 493 QLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMGEVLLGSHP 627 QL G + E R+ ++ N L L+R GR+ + HP Sbjct: 301 QLDGFSSDE---RIKVIAATNRADILDPALMRSGRLDRKIEFPHP 342
>RECA_CHRVI (O32377) Protein recA (Recombinase A)| Length = 347 Score = 34.7 bits (78), Expect = 0.25 Identities = 26/110 (23%), Positives = 49/110 (44%) Frame = +3 Query: 102 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 281 P + +KL V+++ ++ P+ L I + + +V + + P GE+ Sbjct: 101 PVYAEKLGVNMTDLLVSQPDTG-EQALEITDMLVRSGAVDVVVVDSVAALTPKAEIEGEM 159 Query: 282 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 + G A+L+ Q R+ IK+ C +FIN + G M G+ + T Sbjct: 160 GDSHVGLQARLMSQALRKLTGNIKRSNCCVIFINQIRMKIGVMFGSPETT 209
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 34.7 bits (78), Expect = 0.25 Identities = 24/89 (26%), Positives = 42/89 (47%) Frame = +3 Query: 138 KNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 317 + F TL I P + ++G G GK+ V + I + EL GE A+++ Sbjct: 233 ERFATL-GIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMV 291 Query: 318 RQRYREAADMIKKGKMCCLFINDLDAGAG 404 R+ + +M + K C +F +++DA G Sbjct: 292 RELF----EMARTKKACIIFFDEIDAVGG 316
>CLPX_BIFLO (Q8G5R1) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 472 Score = 34.3 bits (77), Expect = 0.32 Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 4/99 (4%) Frame = +3 Query: 192 GGKGQGKSFQCELVFAKMGINPIMMSAGEL-ESGNAGEPAKLIRQRYREAAD-MIKKGKM 365 G G GK++ + + M + ++ A L E+G G+ + + QR +AAD + + + Sbjct: 154 GPTGVGKTYLAQALARVMNVPFVITDATTLTEAGYVGDDVETVLQRLLQAADGDVSRAQH 213 Query: 366 CCLFINDLDAGAGRMGGTTQYT--VNNQMVNATLMNIAD 476 ++I+++D A + G T T V+ + V L+ I + Sbjct: 214 GIIYIDEIDKIARKSGENTSITRDVSGEGVQQALLKILE 252
>RECA_CHLAU (O52394) Protein recA (Recombinase A)| Length = 351 Score = 34.3 bits (77), Expect = 0.32 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 11/85 (12%) Frame = +3 Query: 222 CELVFAKMGINPIMMSA-----------GELESGNAGEPAKLIRQRYREAADMIKKGKMC 368 CE++ I+ I++ + GE+ G A+L+ Q R+ + I K + Sbjct: 131 CEMLVRSNAIDVIVIDSVAALVPRAEIEGEMGDSMPGMQARLMSQALRKLSGAISKSRTV 190 Query: 369 CLFINDLDAGAGRMGGTTQYTVNNQ 443 +FIN L G M GT + T Q Sbjct: 191 VIFINQLRMKIGVMLGTPETTTGGQ 215
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 34.3 bits (77), Expect = 0.32 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + + G G GK+ + V + G+ +S E G A +R + +A Sbjct: 192 KIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQA-- 249 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGGTTQ 425 K C +FI+++DA GAG GG + Sbjct: 250 --KANAPCIVFIDEIDAVGRQRGAGLGGGNDE 279
>RECA_CHLTE (O52393) Protein recA (Recombinase A)| Length = 346 Score = 33.9 bits (76), Expect = 0.42 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 443 GE+ G A+L+ Q R+ I K CLFIN L G M G+ + T + Sbjct: 170 GEMGDSVVGLQARLMSQALRKLTGAISKSSSVCLFINQLRDKIGVMYGSPETTTGGK 226
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 33.9 bits (76), Expect = 0.42 Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 9/135 (6%) Frame = +3 Query: 39 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK--NFMTLPN------IKIPLILGIWG 194 YV K FD+ G +++ LS+ +F+ P KIP + + G Sbjct: 163 YVEGDSTKVTFDDVAG--------VEEAKTELSEVVDFLKFPQRYTALGAKIPKGVLLVG 214 Query: 195 GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCL 374 G GK+ + + G+ ++S E G A +R + +A KK C + Sbjct: 215 PPGTGKTLLAKAAAGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQA----KKQAPCIV 270 Query: 375 FINDLDA-GAGRMGG 416 FI++LDA G R G Sbjct: 271 FIDELDAIGKSRASG 285
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 33.9 bits (76), Expect = 0.42 Identities = 26/102 (25%), Positives = 44/102 (43%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 K+P + + G G GK+ + G++ MS E + G AK IR + +A Sbjct: 312 KLPKGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQA-- 369 Query: 345 MIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 + +FI++LDA G+ Q Q +N L+ + Sbjct: 370 --RSRAPAIIFIDELDAIGGKRNPKDQ-AYAKQTLNQLLVEL 408
>RECA_LISMO (Q9L723) Protein recA (Recombinase A)| Length = 348 Score = 33.9 bits (76), Expect = 0.42 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + +I K K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_LISMF (Q71ZS2) Protein recA (Recombinase A)| Length = 348 Score = 33.9 bits (76), Expect = 0.42 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + +I K K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_LISIN (Q92BV7) Protein recA (Recombinase A)| Length = 348 Score = 33.9 bits (76), Expect = 0.42 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + +I K K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_GEOSL (P62215) Protein recA (Recombinase A)| Length = 338 Score = 33.9 bits (76), Expect = 0.42 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ +I K C +FIN + G M G + T Sbjct: 157 GEMGDSHMGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGNPETT 209
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 33.9 bits (76), Expect = 0.42 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 +IP + + G G GK+ V + G+ +S + G A +R + A Sbjct: 197 RIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENA-- 254 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 449 KK C +FI+++DA GAG GG + T+N +V Sbjct: 255 --KKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLV 294
>RECA_VIBVY (Q7MHR4) Protein recA (Recombinase A)| Length = 349 Score = 33.5 bits (75), Expect = 0.55 Identities = 24/110 (21%), Positives = 47/110 (42%) Frame = +3 Query: 102 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 281 P + KL V++ + ++ P+ L I + + +V + + P GE+ Sbjct: 100 PVYAKKLGVNIDQLLVSQPDTG-EQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEM 158 Query: 282 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 + G A+++ Q R+ +K+ C+FIN + G M G + T Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>RECA_VIBVU (Q8DC51) Protein recA (Recombinase A)| Length = 349 Score = 33.5 bits (75), Expect = 0.55 Identities = 24/110 (21%), Positives = 47/110 (42%) Frame = +3 Query: 102 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 281 P + KL V++ + ++ P+ L I + + +V + + P GE+ Sbjct: 100 PVYAKKLGVNIDQLLVSQPDTG-EQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEM 158 Query: 282 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 + G A+++ Q R+ +K+ C+FIN + G M G + T Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>RECA_AERSA (P94190) Protein recA (Recombinase A)| Length = 353 Score = 33.5 bits (75), Expect = 0.55 Identities = 19/68 (27%), Positives = 31/68 (45%) Frame = +3 Query: 228 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 407 +V + + P GE+ + G A+L+ Q R+ IK C+FIN + G Sbjct: 141 IVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKNANCLCIFINQIRMKIGV 200 Query: 408 MGGTTQYT 431 M G+ + T Sbjct: 201 MFGSPETT 208
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 33.5 bits (75), Expect = 0.55 Identities = 20/68 (29%), Positives = 34/68 (50%) Frame = +3 Query: 192 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 371 G G GK+ + V + G+N I + EL + GE + +RQ ++ A K C Sbjct: 622 GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA----KNSAPCV 677 Query: 372 LFINDLDA 395 +F +++DA Sbjct: 678 IFFDEVDA 685 Score = 33.1 bits (74), Expect = 0.72 Identities = 17/68 (25%), Positives = 36/68 (52%) Frame = +3 Query: 192 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 371 G G GK+ + ++ + + ++A E+ SG +GE + +R+ + +A C Sbjct: 305 GPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAV----SNAPCI 360 Query: 372 LFINDLDA 395 +FI+++DA Sbjct: 361 IFIDEIDA 368
>RECA_VIBCH (P45383) Protein recA (Recombinase A)| Length = 354 Score = 33.5 bits (75), Expect = 0.55 Identities = 24/110 (21%), Positives = 47/110 (42%) Frame = +3 Query: 102 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 281 P + KL V++ + ++ P+ L I + + +V + + P GE+ Sbjct: 100 PVYAKKLGVNIDELLVSQPDTG-EQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEM 158 Query: 282 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 + G A+++ Q R+ +K+ C+FIN + G M G + T Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 33.5 bits (75), Expect = 0.55 Identities = 20/68 (29%), Positives = 34/68 (50%) Frame = +3 Query: 192 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 371 G G GK+ + V + G+N I + EL + GE + +RQ ++ A K C Sbjct: 621 GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA----KNSAPCV 676 Query: 372 LFINDLDA 395 +F +++DA Sbjct: 677 IFFDEVDA 684 Score = 33.5 bits (75), Expect = 0.55 Identities = 19/68 (27%), Positives = 34/68 (50%) Frame = +3 Query: 192 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 371 G G GK+ + ++ + + ++A E+ SG +GE Q+ RE D C Sbjct: 304 GPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGES----EQKLRELFDQAVSNAPCI 359 Query: 372 LFINDLDA 395 +FI+++DA Sbjct: 360 VFIDEIDA 367
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 33.5 bits (75), Expect = 0.55 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 7/102 (6%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 449 KK C +FI+++DA GAG GG + T+N +V Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLV 280
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 33.5 bits (75), Expect = 0.55 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 7/102 (6%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 449 KK C +FI+++DA GAG GG + T+N +V Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLV 280
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 33.5 bits (75), Expect = 0.55 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 7/102 (6%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 449 KK C +FI+++DA GAG GG + T+N +V Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLV 280
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 33.5 bits (75), Expect = 0.55 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 7/102 (6%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 449 KK C +FI+++DA GAG GG + T+N +V Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLV 280
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 33.5 bits (75), Expect = 0.55 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 7/102 (6%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 449 KK C +FI+++DA GAG GG + T+N +V Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLV 280
>RECA2_MYXXA (P48292) Protein recA 2 (Recombinase A 2)| Length = 358 Score = 33.5 bits (75), Expect = 0.55 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ I K + C +FIN + G M G + T Sbjct: 160 GEMGDAHMGVQARLMSQALRKLTGTIAKSQTCVIFINQIRMKIGVMFGNPETT 212
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 33.5 bits (75), Expect = 0.55 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + + G G GK+ + + + +S + G A +R + +A Sbjct: 182 KIPKGILMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 239 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 449 KK C +FI+++DA GAG GG + T+N +V Sbjct: 240 --KKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLV 279
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 33.5 bits (75), Expect = 0.55 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 218 LYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 273 Query: 366 CCLFINDLDAGAG 404 C +F +++DA G Sbjct: 274 CIIFFDEIDAIGG 286
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 33.5 bits (75), Expect = 0.55 Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 5/92 (5%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + + G G GK+ + + + G+ +S E G A +R +++A Sbjct: 242 KIPRGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA-- 299 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGGTTQ 425 K+ C +FI+++DA G G GG + Sbjct: 300 --KENAPCLVFIDEIDAVGRQRGVGYGGGNDE 329
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 33.5 bits (75), Expect = 0.55 Identities = 23/81 (28%), Positives = 36/81 (44%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 K+P + + G G GK+ V + + S E + G A IR +REA Sbjct: 312 KLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREA-- 369 Query: 345 MIKKGKMCCLFINDLDAGAGR 407 K C +FI++LD+ G+ Sbjct: 370 --KANAPCVIFIDELDSVGGK 388
>RECA_CLOAB (P58254) Protein recA (Recombinase A)| Length = 349 Score = 33.1 bits (74), Expect = 0.72 Identities = 18/53 (33%), Positives = 25/53 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ I K K +FIN L G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLTGSINKSKCIAIFINQLREKVGIMFGNPETT 208
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 33.1 bits (74), Expect = 0.72 Identities = 19/75 (25%), Positives = 37/75 (49%) Frame = +3 Query: 189 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 368 +G G GK+ + + + +N + EL + GE +R+ +++A D K C Sbjct: 741 YGPPGTGKTLLAKAIASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARD----AKPC 796 Query: 369 CLFINDLDAGAGRMG 413 +F ++LD+ A + G Sbjct: 797 VIFFDELDSVAPKRG 811
>RECA_CLOTE (Q895I5) Protein recA (Recombinase A)| Length = 350 Score = 33.1 bits (74), Expect = 0.72 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ A I K +FIN L G M G+ + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLAGSINKSNCVAIFINQLREKVGIMFGSPETT 208
>RECA_ACHLA (P29225) Protein recA (Recombinase A)| Length = 331 Score = 33.1 bits (74), Expect = 0.72 Identities = 15/54 (27%), Positives = 29/54 (53%) Frame = +3 Query: 270 AGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 AG++ + + G A+++ Q R+ + +I K + +FIN + G M G + T Sbjct: 156 AGDMSANHVGLQARMMSQAMRKMSGVISKSNVVAIFINQIREKVGVMFGNPETT 209
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 33.1 bits (74), Expect = 0.72 Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 3/105 (2%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 IK P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 255 IKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEA- 313 Query: 342 DMIKKGKMCCLFINDLDAGA---GRMGGTTQYTVNNQMVNATLMN 467 +K +FI+++D+ A + G + V +Q++ TLM+ Sbjct: 314 ---EKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLL--TLMD 353
>RECA1_LACLA (Q01840) Protein recA, chromosomal (Recombinase A)| Length = 387 Score = 33.1 bits (74), Expect = 0.72 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+++ Q R+ A I K K +FIN L G M G+ + T Sbjct: 171 GEIGDSSVGLQARMMSQAMRKLAGHINKTKTTAIFINQLREKVGVMFGSPETT 223
>RECA_VIBAN (P26348) Protein recA (Recombinase A)| Length = 348 Score = 33.1 bits (74), Expect = 0.72 Identities = 23/110 (20%), Positives = 47/110 (42%) Frame = +3 Query: 102 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 281 P + KL V++ + ++ P+ L I + + ++ + + P GE+ Sbjct: 100 PIYAKKLGVNIDELLVSQPDTG-EQALEICDALARSGAIDVIVIDSVAALTPKAEIEGEM 158 Query: 282 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 + G A+++ Q R+ +K+ C+FIN + G M G + T Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>RECA_LISWE (Q83TH3) Protein recA (Recombinase A)| Length = 348 Score = 33.1 bits (74), Expect = 0.72 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_LISSE (Q83TH4) Protein recA (Recombinase A)| Length = 348 Score = 33.1 bits (74), Expect = 0.72 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_LISIV (Q83TH2) Protein recA (Recombinase A)| Length = 348 Score = 33.1 bits (74), Expect = 0.72 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_BACHD (Q9KAA7) Protein recA (Recombinase A)| Length = 349 Score = 32.7 bits (73), Expect = 0.94 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETT 207
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 32.7 bits (73), Expect = 0.94 Identities = 27/95 (28%), Positives = 45/95 (47%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ + V + I + EL G+ +KL+ RE +M +K Sbjct: 198 LYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLV----REIFEMARKKAP 253 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 +FI++LD+ A R T T ++ V TLM + Sbjct: 254 SIIFIDELDSIAARRLNET--TGADREVQRTLMQL 286
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 32.7 bits (73), Expect = 0.94 Identities = 20/75 (26%), Positives = 35/75 (46%) Frame = +3 Query: 189 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 368 +G G GK+ + V +N + EL + GE +R+ ++ A D K C Sbjct: 762 YGPPGTGKTLLAKAVATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARD----AKPC 817 Query: 369 CLFINDLDAGAGRMG 413 +F ++LD+ A + G Sbjct: 818 VIFFDELDSVAPKRG 832
>RECA_VIBPA (Q87LR1) Protein recA (Recombinase A)| Length = 347 Score = 32.7 bits (73), Expect = 0.94 Identities = 24/110 (21%), Positives = 45/110 (40%) Frame = +3 Query: 102 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 281 P + KL V + ++ P+ L I + + +V + + P GE+ Sbjct: 100 PVYAKKLGVDIDALLVSQPDTG-EQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEM 158 Query: 282 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 + G A+++ Q R+ +K+ C+FIN + G M G + T Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>RECA_OCEIH (Q8CXG7) Protein recA (Recombinase A)| Length = 347 Score = 32.7 bits (73), Expect = 0.94 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTTAIFINQIREKVGVMFGNPETT 207
>RECA_BACSK (Q5WFX1) Protein recA (Recombinase A)| Length = 350 Score = 32.7 bits (73), Expect = 0.94 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETT 207
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 32.7 bits (73), Expect = 0.94 Identities = 27/95 (28%), Positives = 45/95 (47%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ + V + I + EL G+ +KL+ RE +M +K Sbjct: 198 LYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLV----REIFEMARKKAP 253 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 +FI++LD+ A R T T ++ V TLM + Sbjct: 254 SIIFIDELDSIAARRLNET--TGADREVQRTLMQL 286
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 32.7 bits (73), Expect = 0.94 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 216 LYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 271 Query: 366 CCLFINDLDAGAG 404 C +F +++DA G Sbjct: 272 CLIFFDEIDAVGG 284
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 32.7 bits (73), Expect = 0.94 Identities = 19/75 (25%), Positives = 36/75 (48%) Frame = +3 Query: 189 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 368 +G G GK+ + + +N + EL + GE +R+ +++A D K C Sbjct: 852 YGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRRVFQKARD----AKPC 907 Query: 369 CLFINDLDAGAGRMG 413 +F ++LD+ A + G Sbjct: 908 VIFFDELDSVAPKRG 922
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 32.7 bits (73), Expect = 0.94 Identities = 19/75 (25%), Positives = 36/75 (48%) Frame = +3 Query: 189 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 368 +G G GK+ + + +N + EL + GE +R+ +++A D K C Sbjct: 878 YGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARD----AKPC 933 Query: 369 CLFINDLDAGAGRMG 413 +F ++LD+ A + G Sbjct: 934 VIFFDELDSVAPKRG 948
>RECA_THETN (Q8RA55) Protein recA (Recombinase A)| Length = 342 Score = 32.7 bits (73), Expect = 0.94 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ A + K K +FIN L G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLAGVTSKSKSIVVFINQLREKVGVMFGNPETT 208
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 32.7 bits (73), Expect = 0.94 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 8/103 (7%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE-LESGNAGEPAKLIRQRYREAA 341 KIP + G G GK+ + + + I ++ E LE PA R R+ Sbjct: 205 KIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPA-----RVRDMF 259 Query: 342 DMIKKGKMCCLFINDLDA-----GAGRMGGTTQY--TVNNQMV 449 M +K C LFI+++DA G G +GG ++ T+N +V Sbjct: 260 AMARKHAPCILFIDEIDAIGRKRGRGHLGGQSEQENTLNQMLV 302
>RECA_ENTFC (Q6KCJ6) Protein recA (Recombinase A)| Length = 349 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPEIT 208
>RECA_PORGI (P77925) Protein recA (Recombinase A)| Length = 340 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ G A+L+ Q R+ I K C+FIN L G + G + T Sbjct: 165 GEMGDNKVGLHARLMSQALRKMTGAISKSNTTCIFINQLREKIGVLFGNPETT 217
>RECA_ENTMU (Q6KCJ3) Protein recA (Recombinase A)| Length = 346 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPEIT 208
>RECA_ENTHR (Q6KCJ5) Protein recA (Recombinase A)| Length = 346 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPEIT 208
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 32.3 bits (72), Expect = 1.2 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ V + G+N I + E+ + G + IR+ + A + K Sbjct: 736 LYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSV----KP 791 Query: 366 CCLFINDLDAGAGRMG----GTTQYTVN 437 C LF ++ D+ A + G G T VN Sbjct: 792 CILFFDEFDSIAPKRGHDSTGVTDRVVN 819
>RECA_RHOBA (Q7UJJ0) Protein recA (Recombinase A)| Length = 375 Score = 32.3 bits (72), Expect = 1.2 Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 11/121 (9%) Frame = +3 Query: 102 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA--- 272 P++ KL V L ++ P+ G+ CE++ ++ I++ + Sbjct: 123 PSWAKKLGVELDSLLVSQPS------------SGEEAMQICEMLVKSNAVDVIIIDSVAA 170 Query: 273 --------GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 428 GE+ + G A+L+ Q R+ I K K +FIN + G M G+ + Sbjct: 171 LVPKAELEGEIGDSHVGLQARLMSQSMRKLTGAIAKSKSAVVFINQIREKVGVMFGSPET 230 Query: 429 T 431 T Sbjct: 231 T 231
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 32.3 bits (72), Expect = 1.2 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ + V I ++A EL GE A+L+R+ + ++ ++ Sbjct: 218 LYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELF----ELAREKAP 273 Query: 366 CCLFINDLDA-GAGRMGGTT 422 +FI+++DA GA RM T Sbjct: 274 SIIFIDEIDAIGARRMRDAT 293
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 32.3 bits (72), Expect = 1.2 Identities = 18/70 (25%), Positives = 35/70 (50%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ A+ + ++ +L G+ AKL+ R+A + K+ Sbjct: 209 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAFQLAKEKSP 264 Query: 366 CCLFINDLDA 395 C +FI+++DA Sbjct: 265 CIIFIDEIDA 274
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 32.3 bits (72), Expect = 1.2 Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 5/104 (4%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + G G GK+ V + G+ +A E G A +R + +A Sbjct: 284 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA-- 341 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATL 461 K C +FI+++DA GAG GG + Q +N L Sbjct: 342 --KSKAPCIVFIDEIDAVGRQRGAGMGGGNDE---REQTINQLL 380
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 32.3 bits (72), Expect = 1.2 Identities = 26/95 (27%), Positives = 43/95 (45%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ + V + I + E GE A+L+ RE + K+ Sbjct: 180 LYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLV----REVFQLAKEKAP 235 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 +FI++LDA A R T T ++ V T+M + Sbjct: 236 SIIFIDELDAIAARR--TNSDTSGDREVQRTMMQL 268
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 32.3 bits (72), Expect = 1.2 Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 5/104 (4%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + G G GK+ V + G+ +A E G A +R + +A Sbjct: 281 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA-- 338 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATL 461 K C +FI+++DA GAG GG + Q +N L Sbjct: 339 --KSKAPCIVFIDEIDAVGRQRGAGMGGGNDE---REQTINQLL 377
>RECA_ENTFA (P42444) Protein recA (Recombinase A)| Length = 348 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 156 GEMGASHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPETT 208
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 32.3 bits (72), Expect = 1.2 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 +IP + + G G GK+ + + G+ +S + G A +R + A Sbjct: 192 RIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENA-- 249 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 449 KK C +FI+++DA GAG GG + T+N +V Sbjct: 250 --KKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLV 289
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 32.3 bits (72), Expect = 1.2 Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 3/105 (2%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 IK P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 245 IKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEA- 303 Query: 342 DMIKKGKMCCLFINDLDAGA---GRMGGTTQYTVNNQMVNATLMN 467 +K +FI+++D+ A + G + V +Q++ TLM+ Sbjct: 304 ---EKNAPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLL--TLMD 343
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 32.3 bits (72), Expect = 1.2 Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 5/104 (4%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + G G GK+ V + G+ +A E G A +R + +A Sbjct: 293 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA-- 350 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATL 461 K C +FI+++DA GAG GG + Q +N L Sbjct: 351 --KSKAPCIVFIDEIDAVGRQRGAGMGGGNDE---REQTINQLL 389
>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Flamingo 1) (mFmi1) Length = 2920 Score = 32.0 bits (71), Expect = 1.6 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Frame = +2 Query: 122 CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 286 C P SL ++ DP Q P G +GRQ R P A V +G + ++D C RA E Sbjct: 1927 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1985 Query: 287 -WERWRASQAHQAAVP*G 337 W R R A P G Sbjct: 1986 WWPRTRFGLPAAAPCPKG 2003
>RECA_LACPL (Q88UZ4) Protein recA (Recombinase A)| Length = 380 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + + K K LFIN + G M G + T Sbjct: 156 GEMGDAHVGLQARLMSQALRKLSGTLNKTKTIALFINQIREKVGVMFGNPETT 208
>RECA_LACAC (Q5FL82) Protein recA (Recombinase A)| Length = 363 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 157 GEMGDAHVGLQARLMSQALRKLSGTISKTKTIAIFINQIREKVGVMFGNPETT 209
>RECA_BORBU (Q59180) Protein recA (Recombinase A)| Length = 365 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/61 (26%), Positives = 28/61 (45%) Frame = +3 Query: 249 INPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 428 + P + GE+ G A+L+ + R+ ++ K C +FIN + G M G + Sbjct: 164 LTPKLEIDGEMGDSQIGLQARLMSKALRKITGILSKSNTCIMFINQIRMRIGVMFGNPET 223 Query: 429 T 431 T Sbjct: 224 T 224
>CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Epidermal growth factor-like 2) (Multiple epidermal growth factor-like domains 3) (Flamingo 1) Length = 2923 Score = 32.0 bits (71), Expect = 1.6 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Frame = +2 Query: 122 CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 286 C P SL ++ DP Q P G +GRQ R P A V +G + ++D C RA E Sbjct: 1926 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1984 Query: 287 -WERWRASQAHQAAVP*G 337 W R R A P G Sbjct: 1985 WWPRTRFGLPAAAPCPKG 2002
>G6PI_PSEHT (Q3IKH4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 548 Score = 32.0 bits (71), Expect = 1.6 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +3 Query: 39 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSF 218 Y SQ + YD M Y+ M+ H++ T+P +P+I G+ G GQ + Sbjct: 328 YTSQAILPYDQALHMLPAYLQQGEMESNGKHVNFAGETVPYTTVPIIWGMTGINGQHAFY 387 Query: 219 QC 224 QC Sbjct: 388 QC 389
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 32.0 bits (71), Expect = 1.6 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 214 LFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 269 Query: 366 CCLFINDLDAGAG 404 C +F +++DA G Sbjct: 270 CLIFFDEIDAIGG 282
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 6/77 (7%) Frame = +2 Query: 257 HHDECRRAGEWERWRASQAHQAAVP*GCRHD----QEG*DVLPLHQRS*RWCG*DGRNH- 421 HH E + R S Q+A P R+ + D + S RW G RNH Sbjct: 3505 HHHEASTQADSSRHSQSGQGQSAGPRTSRNQGSSVSQDSDSQGHSEDSERWSGSASRNHR 3564 Query: 422 -AVHRQQPDGERHPDEH 469 + Q DG RHP H Sbjct: 3565 GSAQEQSRDGSRHPTSH 3581
>RECA_BORGA (Q662N0) Protein recA (Recombinase A)| Length = 362 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/61 (26%), Positives = 28/61 (45%) Frame = +3 Query: 249 INPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 428 + P + GE+ G A+L+ + R+ ++ K C +FIN + G M G + Sbjct: 164 LTPKLEIDGEMGDSQIGLQARLMSKSLRKITGILSKSNTCIMFINQIRMRIGIMFGNPET 223 Query: 429 T 431 T Sbjct: 224 T 224
>CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2 (Multiple| epidermal growth factor-like domains 3) (Fragment) Length = 2144 Score = 32.0 bits (71), Expect = 1.6 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Frame = +2 Query: 122 CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 286 C P SL ++ DP Q P G +GRQ R P A V +G + ++D C RA E Sbjct: 1151 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1209 Query: 287 -WERWRASQAHQAAVP*G 337 W R R A P G Sbjct: 1210 WWPRTRFGLPAAAPCPKG 1227
>RECA_BORHE (Q8VS69) Protein recA (Recombinase A)| Length = 356 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ G A+L+ + R+ ++ K C +FIN L G M G + T Sbjct: 170 GEMGDSQIGLQARLMSKALRKITGILSKSNTCIMFINQLRMKIGVMFGNPETT 222
>KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 32.0 bits (71), Expect = 1.6 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = +3 Query: 171 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD-M 347 PL++ + GG G GK QC + K G +SAGEL P +Y E + Sbjct: 3 PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGELLRDERKNP----DSQYGELIEKY 56 Query: 348 IKKGKM 365 IK+GK+ Sbjct: 57 IKEGKI 62
>KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 32.0 bits (71), Expect = 1.6 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = +3 Query: 171 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD-M 347 PL++ + GG G GK QC + K G +SAGEL P +Y E + Sbjct: 3 PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGELLRDERKNP----DSQYGELIEKY 56 Query: 348 IKKGKM 365 IK+GK+ Sbjct: 57 IKEGKI 62
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 32.0 bits (71), Expect = 1.6 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 213 LFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 268 Query: 366 CCLFINDLDAGAG 404 C +F +++DA G Sbjct: 269 CLIFFDEIDAIGG 281
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 32.0 bits (71), Expect = 1.6 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 213 LFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 268 Query: 366 CCLFINDLDAGAG 404 C +F +++DA G Sbjct: 269 CLIFFDEIDAIGG 281
>RECA_LACPE (Q6KCK3) Protein recA (Recombinase A)| Length = 378 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + + K K LFIN + G M G + T Sbjct: 156 GEMGDAHVGLQARLMSQALRKLSGTLNKTKTIALFINQIREKVGVMFGNPETT 208
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 32.0 bits (71), Expect = 1.6 Identities = 19/75 (25%), Positives = 35/75 (46%) Frame = +3 Query: 189 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 368 +G G GK+ + + +N + EL + GE +R+ ++ A D K C Sbjct: 858 YGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRKVFQRARD----AKPC 913 Query: 369 CLFINDLDAGAGRMG 413 +F ++LD+ A + G Sbjct: 914 VVFFDELDSVAPKRG 928
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 32.0 bits (71), Expect = 1.6 Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + + G G GK+ + + + + +S + G A +R + A Sbjct: 183 KIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHA-- 240 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 449 +K C +FI+++DA GAG GG + T+N +V Sbjct: 241 --RKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLV 280
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 31.6 bits (70), Expect = 2.1 Identities = 21/93 (22%), Positives = 44/93 (47%) Frame = +3 Query: 192 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 371 G G GK+ + V + G +S+ L S GE KL+R + +M + Sbjct: 248 GPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLF----EMARFYAPTT 303 Query: 372 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 +FI+++D+ R G + ++ + ++ + L+ + Sbjct: 304 IFIDEIDSICSRRGTSDEHEASRRVKSELLIQM 336
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 31.6 bits (70), Expect = 2.1 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 8/103 (7%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE-LESGNAGEPAKLIRQRYREAA 341 KIP + G G GK+ + + + I +S E LE PA R R+ Sbjct: 339 KIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPA-----RVRDLF 393 Query: 342 DMIKKGKMCCLFINDLDA-----GAGRMGGTTQY--TVNNQMV 449 + +K C LFI+++DA G G GG ++ T+N +V Sbjct: 394 ALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLV 436
>RECA_STRRM (P95846) Protein recA (Recombinase A)| Length = 376 Score = 31.6 bits (70), Expect = 2.1 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 443 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T + Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETTTGGR 213
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 31.6 bits (70), Expect = 2.1 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 8/103 (7%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE-LESGNAGEPAKLIRQRYREAA 341 KIP + G G GK+ + + + I +S E LE PA R R+ Sbjct: 338 KIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPA-----RVRDLF 392 Query: 342 DMIKKGKMCCLFINDLDA-----GAGRMGGTTQY--TVNNQMV 449 + +K C LFI+++DA G G GG ++ T+N +V Sbjct: 393 ALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLV 435
>RECA_STRVL (P48295) Protein recA (Recombinase A)| Length = 377 Score = 31.6 bits (70), Expect = 2.1 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 443 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T + Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETTTGGR 213
>RECA_STRLI (P48294) Protein recA (Recombinase A)| Length = 374 Score = 31.6 bits (70), Expect = 2.1 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 443 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T + Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETTTGGR 213
>RECA_STRCO (O50487) Protein recA (Recombinase A)| Length = 374 Score = 31.6 bits (70), Expect = 2.1 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 443 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T + Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETTTGGR 213
>RECA_STRAW (Q82KB1) Protein recA (Recombinase A)| Length = 377 Score = 31.6 bits (70), Expect = 2.1 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 443 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T + Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETTTGGR 213
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 31.6 bits (70), Expect = 2.1 Identities = 21/93 (22%), Positives = 44/93 (47%) Frame = +3 Query: 192 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 371 G G GK+ + V + G +S+ L S GE KL+R + +M + Sbjct: 246 GPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLF----EMARFYAPTT 301 Query: 372 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 +FI+++D+ R G + ++ + ++ + L+ + Sbjct: 302 IFIDEIDSICSRRGTSDEHEASRRVKSELLIQM 334
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 31.6 bits (70), Expect = 2.1 Identities = 21/93 (22%), Positives = 44/93 (47%) Frame = +3 Query: 192 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 371 G G GK+ + V + G +S+ L S GE KL+R + +M + Sbjct: 246 GPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLF----EMARFYAPTT 301 Query: 372 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 +FI+++D+ R G + ++ + ++ + L+ + Sbjct: 302 IFIDEIDSICSRRGTSDEHEASRRVKSELLIQM 334
>RECA_PSEOL (Q9R9U2) Protein recA (Recombinase A)| Length = 348 Score = 31.6 bits (70), Expect = 2.1 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+++ Q R+ +K C+FIN + G M G + T Sbjct: 156 GEIGDSHVGLAARMMSQAMRKITGNLKNSNTMCIFINQIRMKIGVMFGNPETT 208
>RECA_PHOPR (Q6LMU2) Protein recA (Recombinase A)| Length = 352 Score = 31.6 bits (70), Expect = 2.1 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+++ Q R+ +K C+FIN + G M G + T Sbjct: 156 GEMGDSHMGLQARMLSQAMRKLTGNLKNANCMCIFINQIRMKIGVMFGNPETT 208
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 31.6 bits (70), Expect = 2.1 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 213 LFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELF----EMARTKKA 268 Query: 366 CCLFINDLDAGAG 404 C +F +++DA G Sbjct: 269 CLIFFDEIDAIGG 281
>RECA_STRAM (P41054) Protein recA (Recombinase A)| Length = 372 Score = 31.6 bits (70), Expect = 2.1 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 443 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T + Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETTTGGR 213
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 31.6 bits (70), Expect = 2.1 Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 5/104 (4%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + G G GK+ V + G+ +A E G A +R + A Sbjct: 261 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENA-- 318 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATL 461 K C +FI+++DA GAG GG + Q +N L Sbjct: 319 --KSKAPCIVFIDEIDAVGRQRGAGLGGGNDE---REQTINQLL 357
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 31.2 bits (69), Expect = 2.7 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 9/95 (9%) Frame = +3 Query: 138 KNFMTLPNIKIPLILGI---------WGGKGQGKSFQCELVFAKMGINPIMMSAGELESG 290 + + LP+++ L G+ +G G GK+ + V A+ +SA L S Sbjct: 353 QEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK 412 Query: 291 NAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDA 395 GE KL+R + A ++ + +FI+++D+ Sbjct: 413 YVGEGEKLVRALFAVAREL----QPSIIFIDEVDS 443
>RECA_STRCT (P41055) Protein recA (Recombinase A) (Fragment)| Length = 142 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T Sbjct: 89 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETT 141
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 31.2 bits (69), Expect = 2.7 Identities = 20/78 (25%), Positives = 39/78 (50%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 I+ P + ++G G GK+ A+ + ++ +L G+ AKL+ R+A Sbjct: 197 IRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAF 252 Query: 342 DMIKKGKMCCLFINDLDA 395 + K+ C +FI+++DA Sbjct: 253 LLAKEKSPCIIFIDEIDA 270
>RECA_TREDE (P62221) Protein recA (Recombinase A)| Length = 414 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = +3 Query: 249 INPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 428 + P AGE+ + G A+L+ Q R+ +I K +FIN + G M G+ + Sbjct: 161 LTPQAEIAGEMGDSHMGLQARLMSQALRKLTAIIGKSNCMIIFINQIRMKIGVMFGSPET 220 Query: 429 T 431 T Sbjct: 221 T 221
>RECA_ENTGA (Q6KCK0) Protein recA (Recombinase A)| Length = 348 Score = 31.2 bits (69), Expect = 2.7 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGIMFGNPETT 208
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 31.2 bits (69), Expect = 2.7 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 9/95 (9%) Frame = +3 Query: 138 KNFMTLPNIKIPLILGI---------WGGKGQGKSFQCELVFAKMGINPIMMSAGELESG 290 + + LP+++ L G+ +G G GK+ + V A+ +SA L S Sbjct: 355 QEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK 414 Query: 291 NAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDA 395 GE KL+R + A ++ + +FI+++D+ Sbjct: 415 YVGEGEKLVRALFAVAREL----QPSIIFIDEVDS 445
>RECA1_MYXXA (P48291) Protein recA 1 (Recombinase A 1)| Length = 342 Score = 31.2 bits (69), Expect = 2.7 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + + C +FIN + G M G + T Sbjct: 159 GEMGDAHMGVQARLMSQALRKLTGAVSRSGTCIIFINQIRMKIGVMFGNPETT 211
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 27.3 bits (59), Expect(2) = 2.9 Identities = 19/78 (24%), Positives = 37/78 (47%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 IK P + ++G G GK+ + V + + + EL G+ +L+RQ + A Sbjct: 222 IKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAA- 280 Query: 342 DMIKKGKMCCLFINDLDA 395 ++ +FI+++DA Sbjct: 281 ---EEHSPSIVFIDEIDA 295 Score = 22.3 bits (46), Expect(2) = 2.9 Identities = 13/45 (28%), Positives = 22/45 (48%) Frame = +1 Query: 493 QLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMGEVLLGSHP 627 QL G + + + +++ N S L LIR GR+ +L +P Sbjct: 321 QLDGFDTSQRD--IKVIMATNRISDLDPALIRPGRIDRKILFENP 363
>RECA_RUMAL (P49985) Protein recA (Recombinase A) (Fragment)| Length = 121 Score = 30.8 bits (68), Expect = 3.6 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 66 GEMGDTHVGLQARLMSQALRKLSGEINKTKTIAIFINQIREKVGVMFGNPETT 118
>RECA_MYCGE (P47581) Protein recA (Recombinase A)| Length = 340 Score = 30.8 bits (68), Expect = 3.6 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 443 G +E G A+++ + R ++ K C LFIN L G M G + T + Sbjct: 158 GTIEEQTIGLHARMMSKGLRRIQSILPDSKTCVLFINQLREKPGVMFGNNEVTTGGK 214
>RECA_CHRVO (Q7NXL9) Protein recA (Recombinase A)| Length = 350 Score = 30.8 bits (68), Expect = 3.6 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 11/81 (13%) Frame = +3 Query: 222 CELVFAKMGINPIMMSA-----------GELESGNAGEPAKLIRQRYREAADMIKKGKMC 368 C+++ G++ I++ + GE+ + G A+L+ Q R+ IK+ Sbjct: 130 CDMLVRSSGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRTNTL 189 Query: 369 CLFINDLDAGAGRMGGTTQYT 431 +FIN + G M G + T Sbjct: 190 VIFINQIRMKIGVMFGNPETT 210
>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)| Length = 1109 Score = 30.8 bits (68), Expect = 3.6 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -2 Query: 341 CSLTVPLPDELGWLSSVPTLQLSGTHHDG-VDAHLGEHKLTLE 216 C+L+ P+P G L+ + TL L+G H G + LG+ K ++ Sbjct: 294 CALSGPIPSCFGQLTKLDTLYLAGNHFSGRIPPELGKCKSMID 336
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 30.8 bits (68), Expect = 3.6 Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + + G G GK+ + + + + +S + G A +R + + Sbjct: 183 KIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHS-- 240 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 449 +K C +FI+++DA GAG GG + T+N +V Sbjct: 241 --RKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLV 280
>RECA_AQUAE (O67905) Protein recA (Recombinase A)| Length = 345 Score = 30.8 bits (68), Expect = 3.6 Identities = 21/84 (25%), Positives = 35/84 (41%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVN 452 GE+ G+ A+L+ Q R+ + K +FIN + G M G + T + Sbjct: 159 GEMGEAQVGKQARLMSQALRKLKGAVHKSNTALIFINQIREKIGVMFGNPETTPGGR--- 215 Query: 453 ATLMNIADAPTQRAAPWHVQQGGE 524 L +D + V++GGE Sbjct: 216 -ALKFFSDMRLEVRRLGDVKEGGE 238
>RECA_CLOPE (P94666) Protein recA (Recombinase A)| Length = 352 Score = 30.8 bits (68), Expect = 3.6 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ I K +FIN L G M G + T Sbjct: 159 GEMGDSHVGLQARLMSQALRKLTGTINKSNCVVIFINQLREKVGIMFGNPETT 211
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 30.8 bits (68), Expect = 3.6 Identities = 21/80 (26%), Positives = 38/80 (47%) Frame = +3 Query: 153 LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYR 332 LP + L++GI +G GKS + + + + + + G L G GE R R Sbjct: 256 LPTPRGLLLIGI---QGTGKSLTAKAIATEWQLPLLKLDVGRLFGGIVGES----ESRLR 308 Query: 333 EAADMIKKGKMCCLFINDLD 392 + D+ + C L+I+++D Sbjct: 309 QMIDVAETLSPCILWIDEMD 328
>RECA_LACHE (Q02348) Protein recA (Recombinase A) (Fragment)| Length = 104 Score = 30.4 bits (67), Expect = 4.6 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGG 416 GE+ + G A+L+ Q R+ + I K K +FIN + G M G Sbjct: 56 GEMGDAHVGLQARLMSQALRKLSGTISKTKTIAIFINQIREKVGIMFG 103
>RECA_MAGMG (P16034) Protein recA (Recombinase A)| Length = 344 Score = 30.4 bits (67), Expect = 4.6 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + K K +FIN + G M G + T Sbjct: 154 GEMGDNHMGLHARLMSQALRKLTGSVSKSKTIVIFINQIRMKIGVMFGNPETT 206
>KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast precursor (EC| 2.7.4.3) (ATP-AMP transphosphorylase) Length = 283 Score = 30.4 bits (67), Expect = 4.6 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = +3 Query: 171 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 350 PL + I G GK QCEL+ K G+ + +SAG+L + + R A + + Sbjct: 64 PLKIMISGAPASGKGTQCELITHKYGL--VHISAGDLLRAEIASGS----ENGRRAKEHM 117 Query: 351 KKGKM 365 +KG++ Sbjct: 118 EKGQL 122
>RECA_SYMTH (Q67NU3) Protein recA (Recombinase A)| Length = 350 Score = 30.4 bits (67), Expect = 4.6 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ G A+L+ Q R+ I K K +FIN + G M G + T Sbjct: 159 GEMGDSFVGLQARLMSQALRKLTGAISKSKAVVIFINQIREKVGVMFGNPETT 211
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 30.4 bits (67), Expect = 4.6 Identities = 24/95 (25%), Positives = 44/95 (46%) Frame = +3 Query: 186 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 365 ++G G GK+ + V + I + A E GE A+L+R + ++ K+ Sbjct: 190 LYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVF----ELAKEKSP 245 Query: 366 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 +FI+++DA A + T ++ V TLM + Sbjct: 246 SIIFIDEIDAVAAKR--LKSSTSGDREVQRTLMQL 278
>UMPK_ARATH (O04905) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) (UMP/CMP kinase) Length = 202 Score = 30.4 bits (67), Expect = 4.6 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYRE 335 K P ++ + GG G GK QC + G +SAG+L E + E +I+ Sbjct: 12 KKPTVIFVLGGPGSGKGTQCAYIVEHYGYT--HLSAGDLLRAEIKSGSENGTMIQ----- 64 Query: 336 AADMIKKGKM 365 +MIK+GK+ Sbjct: 65 --NMIKEGKI 72
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 30.4 bits (67), Expect = 4.6 Identities = 22/78 (28%), Positives = 38/78 (48%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 I+ P ++G G GK+ A+ + ++A +L GE AKL+ R+A Sbjct: 212 IRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLV----RDAF 267 Query: 342 DMIKKGKMCCLFINDLDA 395 + K+ +FI++LDA Sbjct: 268 ALAKEKAPTIIFIDELDA 285
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 30.4 bits (67), Expect = 4.6 Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 +IP + + G G GK+ + V + G+ +S + G A +R + +A Sbjct: 218 RIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDA-- 275 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGGT--TQYTVNNQMV 449 KK +FI+++DA G G GG + T+N ++ Sbjct: 276 --KKAAPAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLI 315
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 30.4 bits (67), Expect = 4.6 Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 +IP + + G G GK+ + V + G+ +S + G A +R + +A Sbjct: 218 RIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDA-- 275 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGGT--TQYTVNNQMV 449 KK +FI+++DA G G GG + T+N ++ Sbjct: 276 --KKAAPAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLI 315
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 30.4 bits (67), Expect = 4.6 Identities = 21/78 (26%), Positives = 39/78 (50%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 IK P + ++G G GK+ V + G +++ E+ S +GE +R+ + E Sbjct: 241 IKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEEC- 299 Query: 342 DMIKKGKMCCLFINDLDA 395 +K + LFI+++DA Sbjct: 300 ---EKNQPAILFIDEIDA 314
>RECA_VIBNA (Q6XZ07) Protein recA (Recombinase A)| Length = 348 Score = 30.4 bits (67), Expect = 4.6 Identities = 23/110 (20%), Positives = 44/110 (40%) Frame = +3 Query: 102 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 281 P + KL V + ++ P+ L I + + +V + + P GE+ Sbjct: 100 PVYAKKLGVDIDALLVSQPDTG-EQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEM 158 Query: 282 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 + G A+++ Q R+ +K+ C+FI + G M G + T Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFIKQIRMKIGVMFGNPETT 208
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 30.4 bits (67), Expect = 4.6 Identities = 23/93 (24%), Positives = 44/93 (47%) Frame = +3 Query: 192 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 371 G G GK+ + V + + I M+ EL GE ++L+R + ++ ++ Sbjct: 193 GPPGTGKTMLAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLF----ELAEQKDPAI 248 Query: 372 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 +FI+++DA A + T T + V T+M + Sbjct: 249 IFIDEIDAVAAKR--TDSKTSGDAEVQRTMMQL 279
>RECA_LACDE (Q02347) Protein recA (Recombinase A) (Fragment)| Length = 104 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGG 416 GE+ + G A+L+ Q R+ + I K K +FIN + G M G Sbjct: 56 GEMGDSHVGLQARLMSQALRKLSGTIAKTKTIAIFINQIREKVGVMFG 103
>RECA_CLOBE (P42441) Protein recA (Recombinase A) (Fragment)| Length = 104 Score = 30.0 bits (66), Expect = 6.1 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGT 419 GE+ + G A+L+ Q R+ A I K +FIN L G M G+ Sbjct: 56 GEMGDSHIGLQARLMSQALRKLAGTINKTNCVAIFINQLREKLGFMFGS 104
>RECA_STAES (Q8CPF4) Protein recA (Recombinase A)| Length = 349 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAEQ (Q5HPQ6) Protein recA (Recombinase A)| Length = 349 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_METFL (P18076) Protein recA (Recombinase A)| Length = 344 Score = 30.0 bits (66), Expect = 6.1 Identities = 27/110 (24%), Positives = 46/110 (41%) Frame = +3 Query: 102 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 281 P + KL V++S ++ P+ L I + S +V + + P GE+ Sbjct: 101 PVYAQKLGVNVSDLLISQPDTG-EQALEIADMLVRSGSVDVVVVDSVAALTPKAEIEGEM 159 Query: 282 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 + G A+L+ Q R+ IK+ +FIN + G M G + T Sbjct: 160 GDSHMGLQARLMSQALRKLTANIKRTNTLVIFINQIRMKIGLMFGNPETT 209
>RECA_MESFL (Q6F1R0) Protein recA (Recombinase A)| Length = 333 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 443 GE+ + G A+++ + R+ +I K K +FIN L G M G + T + Sbjct: 160 GEMSDQSIGLQARMMSKALRKLNGVISKSKTTVIFINQLREKIGIMFGNPETTTGGR 216
>RECA_STAAW (P68846) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAU (P68845) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAS (Q6G9S8) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAR (Q6GHF0) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAN (P68844) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAM (P68843) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAC (Q5HGE6) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_METCA (Q60BS8) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 6.1 Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 5/115 (4%) Frame = +3 Query: 102 PAFMDKLVVHLSKNFMTLPN-----IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 266 P + +K+ V+L ++ P+ ++I +L GG ++ + + P Sbjct: 101 PVYAEKIGVNLDDLLVSQPDTGEQALEIADVLVRSGG------VDVVVIDSVAALTPKAE 154 Query: 267 SAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ IK+ +FIN + G M G + T Sbjct: 155 LEGEMGDSHMGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGNPETT 209
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 30.0 bits (66), Expect = 6.1 Identities = 28/111 (25%), Positives = 52/111 (46%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 297 Query: 342 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRA 494 +K +FI+++D+ A + T V ++V + L+ + D RA Sbjct: 298 ---EKNAPSIIFIDEIDSIAPKR-EKTHGEVERRIV-SQLLTLMDGLKSRA 343
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 30.0 bits (66), Expect = 6.1 Identities = 28/111 (25%), Positives = 52/111 (46%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 297 Query: 342 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRA 494 +K +FI+++D+ A + T V ++V + L+ + D RA Sbjct: 298 ---EKNAPSIIFIDEIDSIAPKR-EKTHGEVERRIV-SQLLTLMDGLKSRA 343
>COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A| kinase) Length = 208 Score = 30.0 bits (66), Expect = 6.1 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMG 248 ++PL++G+ GG G GKS C ++ A+MG Sbjct: 4 RLPLLVGVTGGIGSGKSTVCAML-AEMG 30
>BAI3_MOUSE (Q80ZF8) Brain-specific angiogenesis inhibitor 3 precursor| Length = 1522 Score = 30.0 bits (66), Expect = 6.1 Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 16/138 (11%) Frame = +2 Query: 242 DGHQPHHDECRRAGEWERWRASQAHQAAVP*GCRHDQEG*DVLPLHQRS*RWCG*DGRNH 421 + + ++ EC G+W +W H + GC +G +R R C + Sbjct: 443 ESRECYNPECTANGQWNQW----GHWS----GCSKSCDG-----GWERRMRTC----QGA 485 Query: 422 AVHRQQPDGERHPDEHRRCPHPTCSS---------LACTTRRRTPV-------CPSSSPV 553 AV QQ +G +E RRC C + L +RTP CP ++ Sbjct: 486 AVTGQQCEGT--GEEVRRCSEQRCPAPYEICPEDYLISMVWKRTPAGDLAFNQCPLNATG 543 Query: 554 TISRRSTLL*SVMVVWEK 607 T SRR +L + WE+ Sbjct: 544 TTSRRCSLSLHGVASWEQ 561
>VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG) (16 kDa| protein) (ORF 2) Length = 142 Score = 30.0 bits (66), Expect = 6.1 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = -3 Query: 250 MPILANTSSHWNDFP*PL-PPQIPKMSGILMLGRVMKFLERWTTSLS 113 M I++ TSS W P PL PPQ+P + ++ R + + T S S Sbjct: 49 MSIISRTSS-WRTSPRPLPPPQVPSLMNSILTSRTQQSSPKLTNSAS 94
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 30.0 bits (66), Expect = 6.1 Identities = 20/78 (25%), Positives = 38/78 (48%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 +K P + ++G G GK+ V + G +++ E+ S +GE +R+ + E Sbjct: 240 VKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAEC- 298 Query: 342 DMIKKGKMCCLFINDLDA 395 +K LFI+++DA Sbjct: 299 ---EKNSPAILFIDEIDA 313
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 30.0 bits (66), Expect = 6.1 Identities = 26/111 (23%), Positives = 50/111 (45%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 238 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 296 Query: 342 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRA 494 +K +FI+++D+ A + T + + + L+ + D RA Sbjct: 297 ---EKNAPSIIFIDEIDSIAPKREKTNGEV--ERRIVSQLLTLMDGLKSRA 342
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 30.0 bits (66), Expect = 6.1 Identities = 20/93 (21%), Positives = 44/93 (47%) Frame = +3 Query: 192 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 371 G G GK+ + V + G +S+ L S GE KL+R + +M + Sbjct: 274 GPPGTGKTMLAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLF----EMARFYAPST 329 Query: 372 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 470 +FI+++D+ + G +++ + ++ + L+ + Sbjct: 330 IFIDEIDSICSKRGTGSEHEASRRVKSELLIQM 362
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 30.0 bits (66), Expect = 6.1 Identities = 26/111 (23%), Positives = 50/111 (45%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 238 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 296 Query: 342 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRA 494 +K +FI+++D+ A + T + + + L+ + D RA Sbjct: 297 ---EKNAPSIIFIDEIDSIAPKREKTNGEV--ERRIVSQLLTLMDGLKSRA 342
>Y1420_RALSO (Q8XZH5) UPF0085 protein RSc1420| Length = 279 Score = 30.0 bits (66), Expect = 6.1 Identities = 33/102 (32%), Positives = 41/102 (40%), Gaps = 6/102 (5%) Frame = -2 Query: 386 IVDEEA------AHLTLLDHVCSLTVPLPDELGWLSSVPTLQLSGTHHDGVDAHLGEHKL 225 +VD EA A T+LD + PL ELG SS G H D +K Sbjct: 77 LVDAEANRIVHQARATILDMFQTFIEPLERELGLKSS----HAIGRFHQNADTEA--YKN 130 Query: 224 TLE*FSLTLASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRS 99 +E + +LA D GQ H+ E D LV SRS Sbjct: 131 RIEAINFSLAHDD---------GQSHKNLAEADVILVGVSRS 163
>RECA_VIBF1 (Q5E7G6) Protein recA (Recombinase A)| Length = 348 Score = 30.0 bits (66), Expect = 6.1 Identities = 22/110 (20%), Positives = 46/110 (41%) Frame = +3 Query: 102 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 281 P + KL V++ + ++ P+ L I + + ++ + + P GE+ Sbjct: 100 PVYAKKLGVNIDELLVSQPDTG-EQALEICDALARSGAVDVMVIDSVAALTPKAEIEGEM 158 Query: 282 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 + G A+++ Q R+ +K+ +FIN + G M G + T Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGNPETT 208
>RECA_STAHJ (Q4L5Y8) Protein recA (Recombinase A)| Length = 348 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_LEGPN (Q05358) Protein recA (Recombinase A)| Length = 348 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ IK+ +FIN + G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETT 209
>RECA_LEGPL (Q5WVQ0) Protein recA (Recombinase A)| Length = 348 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ IK+ +FIN + G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETT 209
>RECA_LEGPH (Q5ZUJ7) Protein recA (Recombinase A)| Length = 348 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ IK+ +FIN + G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETT 209
>RECA_LEGPA (Q5X4B5) Protein recA (Recombinase A)| Length = 348 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ IK+ +FIN + G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETT 209
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 30.0 bits (66), Expect = 6.1 Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + G G GK+ + + + + +S + G A +R + + Sbjct: 186 KIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQG-- 243 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGGT--TQYTVNNQMV 449 K+ C +FI+++DA G G GG + T+N +V Sbjct: 244 --KRNAPCIIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLV 283
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 30.0 bits (66), Expect = 6.1 Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + G G GK+ + + + + +S + G A +R + + Sbjct: 186 KIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQG-- 243 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGGT--TQYTVNNQMV 449 K+ C +FI+++DA G G GG + T+N +V Sbjct: 244 --KRNAPCIIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLV 283
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 30.0 bits (66), Expect = 6.1 Identities = 28/111 (25%), Positives = 52/111 (46%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 341 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 297 Query: 342 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTQRA 494 +K +FI+++D+ A + T V ++V + L+ + D RA Sbjct: 298 ---EKNAPSIIFIDEIDSIAPKR-EKTHGEVERRIV-SQLLTLMDGLKSRA 343
>KAD1_HUMAN (P00568) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 30.0 bits (66), Expect = 6.1 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNAGEPAKLIRQRYR 332 +K I+ + GG G GK QCE + K G + + E+ SG+A R + Sbjct: 5 LKKTKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRSEVSSGSA---------RGK 55 Query: 333 EAADMIKKGKM 365 + +++++KG++ Sbjct: 56 KLSEIMEKGQL 66
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 30.0 bits (66), Expect = 6.1 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 +IP + + G G GK+ + V + G+ +S + G A +R + A Sbjct: 224 RIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFENA-- 281 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGGT--TQYTVNNQMV 449 KK +FI+++DA GAG GG + T+N +V Sbjct: 282 --KKTAPSIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLV 321
>RECA_NEIEG (O86382) Protein recA (Recombinase A) (Fragment)| Length = 237 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 11/81 (13%) Frame = +3 Query: 222 CELVFAKMGINPIMMSA-----------GELESGNAGEPAKLIRQRYREAADMIKKGKMC 368 C+++ G++ +++ + G++ + G A+L+ Q R+ IKK Sbjct: 89 CDMLVRSGGVDMVVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGHIKKTNTL 148 Query: 369 CLFINDLDAGAGRMGGTTQYT 431 +FIN + G M G+ + T Sbjct: 149 VVFINQIRMKIGVMFGSPETT 169
>RECA_AGRT5 (P33156) Protein recA (Recombinase A)| Length = 363 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ G A+L+ Q R+ I K K +FIN + G M G+ + T Sbjct: 168 GEMGDSLPGLQARLMSQALRKLTASISKSKCMVIFINQIRMKIGVMFGSPETT 220
>RECA_PSEST (Q07809) Protein recA (Recombinase A)| Length = 347 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 431 GE+ + G A+L+ Q R+ IK +FIN + G M G+ + T Sbjct: 156 GEMGDAHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETT 208
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 29.6 bits (65), Expect = 7.9 Identities = 21/72 (29%), Positives = 35/72 (48%) Frame = +3 Query: 192 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 371 G G GK+ + V + I + EL + GE A+L+R+ +R A + Sbjct: 180 GPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPS----I 235 Query: 372 LFINDLDAGAGR 407 LFI+++DA A + Sbjct: 236 LFIDEIDAIASK 247
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 29.6 bits (65), Expect = 7.9 Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Frame = +3 Query: 165 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 344 KIP + + G G GK+ + + + + +S + G A +R + + Sbjct: 183 KIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHS-- 240 Query: 345 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 449 +K C +FI+++DA GAG GG + T+N +V Sbjct: 241 --RKVAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLV 280
>RECA_PASMU (P95526) Protein recA (Recombinase A)| Length = 354 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/68 (26%), Positives = 29/68 (42%) Frame = +3 Query: 228 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 407 +V + + P GE+ + G A+L+ Q R+ IK +FIN + G Sbjct: 143 IVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTGQIKNSNCLVVFINQIRMKIGV 202 Query: 408 MGGTTQYT 431 M G + T Sbjct: 203 MFGNPETT 210
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 29.6 bits (65), Expect = 7.9 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 5/97 (5%) Frame = +3 Query: 150 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 329 T+ KIP + + G G GK+ + + + + ++ E G A +R + Sbjct: 212 TIVGAKIPKGILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLF 271 Query: 330 REAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQ 425 ++A++ C +FI+++DA GAG GG + Sbjct: 272 KKASE----NAPCIVFIDEIDAVGRERGAGVGGGNDE 304
>RECA_SHEON (Q8EBS0) Protein recA (Recombinase A)| Length = 357 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/68 (25%), Positives = 31/68 (45%) Frame = +3 Query: 228 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 407 +V + + P GE+ + G A+++ Q R+ A +K+ +FIN + G Sbjct: 143 IVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGV 202 Query: 408 MGGTTQYT 431 M G + T Sbjct: 203 MFGNPETT 210
>RECA_ERWCT (Q6D1S8) Protein recA (Recombinase A)| Length = 357 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/68 (25%), Positives = 31/68 (45%) Frame = +3 Query: 228 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 407 +V + + P GE+ + G A+++ Q R+ A +K+ +FIN + G Sbjct: 143 IVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQANTLLIFINQIRMKIGV 202 Query: 408 MGGTTQYT 431 M G + T Sbjct: 203 MFGNPETT 210
>RECA_PROVU (P26346) Protein recA (Recombinase A)| Length = 325 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/68 (25%), Positives = 31/68 (45%) Frame = +3 Query: 228 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 407 +V + + P GE+ + G A+++ Q R+ A +K+ +FIN + G Sbjct: 143 IVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQANTLLIFINQIRMKIGV 202 Query: 408 MGGTTQYT 431 M G + T Sbjct: 203 MFGNPETT 210
>RECA_AQUPY (P33542) Protein recA (Recombinase A)| Length = 348 Score = 29.6 bits (65), Expect = 7.9 Identities = 20/84 (23%), Positives = 35/84 (41%) Frame = +3 Query: 273 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVN 452 GE+ G+ A+L+ Q R+ + + +FIN + G M G + T + Sbjct: 162 GEMGEAQVGKQARLMSQALRKLKGAVHRSNTALIFINQIREKIGVMFGNPETTPGGR--- 218 Query: 453 ATLMNIADAPTQRAAPWHVQQGGE 524 L +D + V++GGE Sbjct: 219 -ALKFFSDMRLEVRRLGDVKEGGE 241
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 29.6 bits (65), Expect = 7.9 Identities = 20/85 (23%), Positives = 39/85 (45%) Frame = +3 Query: 192 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 371 G G GK+ + V + +S+ L S GE KL+R + +M + Sbjct: 249 GPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLF----EMARFYSPAT 304 Query: 372 LFINDLDAGAGRMGGTTQYTVNNQM 446 +FI+++D+ R G + ++ + +M Sbjct: 305 IFIDEIDSICSRRGTSEEHEASRRM 329
>KAD1_RABIT (P00569) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Frame = +3 Query: 162 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNAGEPAKLIRQRYR 332 +K I+ + GG G GK QCE + K G + + E+ SG+A R + Sbjct: 5 LKKAKIIFVVGGPGSGKGTQCEKIVHKYGYTHLSTGDLLRAEVSSGSA---------RGK 55 Query: 333 EAADMIKKGKM 365 + +++++KG++ Sbjct: 56 KLSEIMEKGQL 66
>KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 (EC 2.7.4.3)| (ATP-AMP transphosphorylase) Length = 210 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +3 Query: 141 NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 281 N L +P+ I GG G GK QC+ + AK G+ +S+G+L Sbjct: 11 NLAPLKAAGVPIFF-IVGGPGSGKGTQCDKIVAKYGLT--HLSSGDL 54 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,357,378 Number of Sequences: 219361 Number of extensions: 2316713 Number of successful extensions: 7277 Number of sequences better than 10.0: 225 Number of HSP's better than 10.0 without gapping: 6910 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7255 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
