Clone Name	basd1k04
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR...	1219	0.0
2	gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR...	1219	0.0
3	gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA	1053	0.0
4	gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form...	866	0.0
5	gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for...	825	0.0
6	dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon...	761	0.0
7	dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ...	753	0.0
8	dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon...	753	0.0
9	dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon...	753	0.0
10	dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s...	753	0.0
11	dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l...	753	0.0
12	dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon...	745	0.0
13	gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb...	733	0.0
14	gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5...	718	0.0
15	dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon...	710	0.0
16	gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA...	638	e-180
17	gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c...	634	e-179
18	gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ...	557	e-155
19	gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ...	557	e-155
20	gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ...	557	e-155
21	gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ...	557	e-155
22	gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox...	519	e-144
23	gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox...	502	e-139
24	ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	474	e-130
25	ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	474	e-130
26	ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	474	e-130
27	gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890)...	474	e-130
28	gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, comp...	474	e-130
29	gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	474	e-130
30	gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730...	474	e-130
31	gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosph...	474	e-130
32	gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb...	466	e-128
33	gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730...	466	e-128
34	gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	466	e-128
35	gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete se...	466	e-128
36	gb|AY110044.1| Zea mays CL1146_1 mRNA sequence	458	e-125
37	gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph...	444	e-121
38	gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec...	442	e-121
39	gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome...	420	e-114
40	gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome...	420	e-114
41	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	420	e-114
42	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	420	e-114
43	gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, c...	396	e-107
44	emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car...	377	e-101
45	gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA...	369	8e-99
46	gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds	369	8e-99
47	emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase	367	3e-98
48	gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1...	361	2e-96
49	gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precur...	357	3e-95
50	gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre...	355	1e-94
51	gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso...	327	3e-86
52	gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase m...	309	6e-81
53	gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ...	305	9e-80
54	gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphospha...	305	9e-80
55	emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphospha...	303	4e-79
56	gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate...	301	1e-78
57	gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence	276	8e-71
58	gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 gen...	276	8e-71
59	gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 gen...	276	8e-71
60	gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 gen...	276	8e-71
61	gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 gen...	276	8e-71
62	gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen...	276	8e-71
63	gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 gen...	276	8e-71
64	gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 gen...	276	8e-71
65	gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 gen...	276	8e-71
66	gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 gen...	276	8e-71
67	gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, part...	268	2e-68
68	gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 gen...	268	2e-68
69	gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 gen...	268	2e-68
70	gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 gen...	268	2e-68
71	gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 gen...	268	2e-68
72	gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 gen...	268	2e-68
73	gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genom...	268	2e-68
74	gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence	256	8e-65
75	gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/...	228	2e-56
76	gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precur...	198	2e-47
77	gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca...	196	6e-47
78	emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubis...	192	1e-45
79	emb|Y10657.1|CLRCAGENE C.littorale rca gene	184	2e-43
80	gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo...	174	2e-40
81	emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphat...	143	8e-31
82	emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase	141	3e-30
83	gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bi...	137	5e-29
84	gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car...	133	8e-28
85	gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ...	123	8e-25
86	gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete s...	113	7e-22
87	gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence	105	2e-19
88	emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph...	90	1e-14
89	gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete se...	78	4e-11
90	gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete se...	78	4e-11
91	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	78	4e-11
92	gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic s...	56	1e-04
93	ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G7...	42	2.2
94	gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	42	2.2
95	gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	42	2.2
96	emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Co...	42	2.2
97	dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown ...	42	2.2
98	gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N...	42	2.2
99	gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence	40	8.7
100	gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC...	40	8.7
101	gb|AC115709.11| Mus musculus chromosome 12, clone RP23-76M3, com...	40	8.7
102	gb|AC108471.3| Homo sapiens BAC clone RP11-539G18 from 4, comple...	40	8.7
103	ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like f...	40	8.7
104	ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like f...	40	8.7
105	gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence	40	8.7
106	emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Co...	40	8.7
107	gb|AE009524.1| Brucella melitensis 16M chromosome I, section 81 ...	40	8.7
108	gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I...	40	8.7
109	ref|XM_312558.2| Anopheles gambiae str. PEST ENSANGP00000014302 ...	40	8.7
110	emb|CR974583.24| Mouse DNA sequence from clone RP23-118G7 on chr...	40	8.7
111	gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein p...	40	8.7
112	emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,...	40	8.7
113	gb|U51683.1|BAU51683 Brucella abortus phosphatidate cytidyltrans...	40	8.7
114	emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chr...	40	8.7

---

>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score = 1219 bits (615), Expect = 0.0
 Identities = 635/639 (99%), Gaps = 2/639 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgga 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413  gcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgga 472

                                                                        
Query: 61   agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473  agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 532

                                                                        
Query: 121  ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533  ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 592

                                                                        
Query: 181  tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593  tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 652

                                                                        
Query: 241  agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653  agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 712

                                                                        
Query: 301  agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713  agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 772

                                                                        
Query: 361  agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773  agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 832

                                                                        
Query: 421  cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833  cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 892

                                                                        
Query: 481  ccacccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 540
            ||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 893  cca-ccaacgtgcagctccctggcatgtacaacaagagggagaacccccgtgtgcccatc 951

                                                                        
Query: 541  gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 952  gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat- 1010

                                                   
Query: 601  ggagaagttctactgggctcccacccgtgacgaccgtat 639
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 ggagaagttctactgggctcccacccgtgacgaccgtat 1049

---

>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score = 1219 bits (615), Expect = 0.0
 Identities = 635/639 (99%), Gaps = 2/639 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgga 217

                                                                       
Query: 61  agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 277

                                                                       
Query: 121 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 337

                                                                       
Query: 181 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 397

                                                                       
Query: 241 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 457

                                                                       
Query: 301 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 517

                                                                       
Query: 361 agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 577

                                                                       
Query: 421 cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 637

                                                                       
Query: 481 ccacccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 540
           ||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 638 cca-ccaacgtgcagctccctggcatgtacaacaagagggagaacccccgtgtgcccatc 696

                                                                       
Query: 541 gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 697 gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtat- 755

                                                  
Query: 601 ggagaagttctactgggctcccacccgtgacgaccgtat 639
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ggagaagttctactgggctcccacccgtgacgaccgtat 794

---

>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score = 1053 bits (531), Expect = 0.0
 Identities = 614/639 (96%), Gaps = 2/639 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgga 60
           ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||   ||
Sbjct: 333 gcgacggcacccacgaggccgtcctcagctcatacgagtacgtcagccagggactcaaga 392

                                                                       
Query: 61  agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 452

                                                                       
Query: 121 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 180
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttgttgtccatctctccaagaacttcatgaccctgcccaacatcaagatcccactcatct 512

                                                                       
Query: 181 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 240
           |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 513 tgggtatctggggaggcaagggtcaaggaaaatccttccagtgtgagcttgtcttcgcca 572

                                                                       
Query: 241 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 300
           |||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 573 agatgggcatcaacccaatcatgatgagtgccggagagctggagagtggcaacgccggag 632

                                                                       
Query: 301 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 692

                                                                       
Query: 361 agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 420
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 693 agatgtgctgcctcttcatcaacgatcttgacgccggtgcgggtaggatgggcgggacca 752

                                                                       
Query: 421 cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 480
           | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 753 cacagtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatcgccgatgccc 812

                                                                       
Query: 481 ccacccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 540
           ||| |||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 813 cca-ccaatgtgcagctcccaggcatgtacaacaaggaggagaacccacgtgtgcccatc 871

                                                                       
Query: 541 gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 600
           |||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||| 
Sbjct: 872 gtcgtcactggtaacgatttctcgacgttgtacgcccctctgatccgtgatggtcgtat- 930

                                                  
Query: 601 ggagaagttctactgggctcccacccgtgacgaccgtat 639
           ||||||||||||||||||||||||||| |||||||||||
Sbjct: 931 ggagaagttctactgggctcccacccgcgacgaccgtat 969

---

>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  866 bits (437), Expect = 0.0
 Identities = 590/639 (92%), Gaps = 2/639 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgga 60
           |||| || ||||||||||||||||||||||| |||||||||||||||||||||||   ||
Sbjct: 344 gcgatggnacccacgaggccgtcctcagctcntacgagtacgtcagccagggcctcaaga 403

                                                                       
Query: 61  agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 120
           |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 404 agtacgacttcgacaacaccatgggaggcttctacatcgccccggctttcatggacaagc 463

                                                                       
Query: 121 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 180
           | |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tcgttgtccacctctccaagaacttcatgaccctgcccaacatcaagatcccactcatct 523

                                                                       
Query: 181 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 240
           |||||||||||||||| |||||||| || ||||| ||||||||||||||||| |||||||
Sbjct: 524 tgggtatctggggaggaaagggtcaggggaaatccttccagtgtgagcttgtcttcgcca 583

                                                                       
Query: 241 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 300
           |||||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||
Sbjct: 584 agatgggcatcaacccaatcatgatgagtgccggagagctggagagcggcaacgccggag 643

                                                                       
Query: 301 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 360
           ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |
Sbjct: 644 agccagccaagctcatcaggcagcggtaccgcgaggccgcagacatgatcaagaagggca 703

                                                                       
Query: 361 agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 420
           ||||||||||||||||||||||||| || ||||| || |||||| |||||||||| ||||
Sbjct: 704 agatgtgctgcctcttcatcaacgacctcgacgccggcgcgggtcggatgggcgggacca 763

                                                                       
Query: 421 cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 480
           | ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 764 cccagtacaccgtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacgcgc 823

                                                                       
Query: 481 ccacccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 540
           ||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||
Sbjct: 824 cca-ccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgtgtccccatc 882

                                                                       
Query: 541 gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 600
            |||||||||| ||||| ||||||||||| ||||| || || |||||||| |||||||| 
Sbjct: 883 atcgtcaccggcaacgacttctcgacgctgtacgcgcccctcatccgtgacggtcgtat- 941

                                                  
Query: 601 ggagaagttctactgggctcccacccgtgacgaccgtat 639
           |||||||||||||||||| |||||||| || ||||||||
Sbjct: 942 ggagaagttctactgggcgcccacccgcgaggaccgtat 980

---

>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  825 bits (416), Expect = 0.0
 Identities = 585/639 (91%), Gaps = 2/639 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgga 60
           |||| ||||||||||||||||||||||||||||||||||||||||||||||||||   ||
Sbjct: 354 gcgatggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctcaaga 413

                                                                       
Query: 61  agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 120
           |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 414 agtacgacttcgacaacaccatgggaggcttctacatcgccccggctttcatggacaagc 473

                                                                       
Query: 121 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 180
           | |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tcgttgtccacctctccaagaacttcatgaccctgcccaacatcaagatcccactcatct 533

                                                                       
Query: 181 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 240
           |||||||||||||||| |||||||| || ||||| ||||||||||||||||| |||||||
Sbjct: 534 tgggtatctggggaggaaagggtcaggggaaatccttccagtgtgagcttgtcttcgcca 593

                                                                       
Query: 241 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 300
           |||||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||
Sbjct: 594 agatgggcatcaacccaatcatgatgagtgccggagagctggagagcggcaacgccggag 653

                                                                       
Query: 301 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 360
           ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |
Sbjct: 654 agccagccaagctcatcaggcagcggtaccgcgaggccgcagacatgatcaagaagggca 713

                                                                       
Query: 361 agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 420
           ||||||||||||||||||||||||| || ||||| || |||||| |||||||||| ||||
Sbjct: 714 agatgtgctgcctcttcatcaacgacctcgacgccggcgcgggtcggatgggcgggacca 773

                                                                       
Query: 421 cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 480
           | ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 774 cccagtacaccgtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacgcgc 833

                                                                       
Query: 481 ccacccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 540
           ||| ||||||||||||| || || ||||||||||||||||||||||||||||| ||||| 
Sbjct: 834 cca-ccaacgtgcagcttccggggatgtacaacaaggaggagaacccccgtgttcccatt 892

                                                                       
Query: 541 gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 600
            | |||||||| ||||| || |||||||| ||||| || || || | ||| |||||||| 
Sbjct: 893 atngtcaccggcaacgacttttcgacgctgtacgccccccttattcctgacggtcgtat- 951

                                                  
Query: 601 ggagaagttctactgggctcccacccgtgacgaccgtat 639
           ||||||||| |||||||| |||||||| || ||||||||
Sbjct: 952 ggagaagttttactgggcgcccacccgcgaggaccgtat 990

---

>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
           insert sequence
          Length = 1691

 Score =  761 bits (384), Expect = 0.0
 Identities = 572/632 (90%), Gaps = 2/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaagtac 65
           |||||||||||||||||||||||||||||||||||| |||||||||| ||  | | ||||
Sbjct: 342 ggcacccacgaggccgtcctcagctcctacgagtacctcagccagggtctcagaacgtac 401

                                                                       
Query: 66  gacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgtt 125
           ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || 
Sbjct: 402 gacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagctcgtc 461

                                                                       
Query: 126 gtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggt 185
           |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |||||
Sbjct: 462 gtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcctgggt 521

                                                                       
Query: 186 atctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatg 245
           |||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||||
Sbjct: 522 atctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaagatg 581

                                                                       
Query: 246 ggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagcca 305
           || |||||||||||||||||||| ||||||||||||||||| || ||||| |||||||| 
Sbjct: 582 gggatcaaccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccg 641

                                                                       
Query: 306 gccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatg 365
           || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 642 gcgaagctgatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatg 701

                                                                       
Query: 366 tgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcag 425
           ||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||
Sbjct: 702 tgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccag 761

                                                                       
Query: 426 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 485
           ||||| || |||||||||||||||||||||||||||||||||||||||||    |||| |
Sbjct: 762 tacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccga-caacccaac 820

                                                                       
Query: 486 caacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgt 545
           |||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 821 caacgtgcagctccctgggatgtacaacaaggaggacaacccccgtgtccccatcatcgt 880

                                                                       
Query: 546 caccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggaga 605
           |||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||| |||||
Sbjct: 881 caccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtat-ggaga 939

                                           
Query: 606 agttctactgggctcccacccgtgacgaccgt 637
           |||||||||||||||||||||| |||||||||
Sbjct: 940 agttctactgggctcccacccgcgacgaccgt 971

---

>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for
           ribulose-bisphosphate carboxylase activase large isoform
           precursor protein, complete cds, clone: 13YPR038
          Length = 1558

 Score =  753 bits (380), Expect = 0.0
 Identities = 571/632 (90%), Gaps = 2/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaagtac 65
           |||||||||||||||||||||||||||||||||||| |||||||||| ||  | | ||||
Sbjct: 306 ggcacccacgaggccgtcctcagctcctacgagtacctcagccagggtctcagaacgtac 365

                                                                       
Query: 66  gacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgtt 125
           ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || 
Sbjct: 366 gacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagctcgtc 425

                                                                       
Query: 126 gtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggt 185
           |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |||||
Sbjct: 426 gtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcctgggt 485

                                                                       
Query: 186 atctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatg 245
           |||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||||
Sbjct: 486 atctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaagatg 545

                                                                       
Query: 246 ggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagcca 305
           || |||||||||||||||||||| ||||||||||||||||| || ||||| |||||||| 
Sbjct: 546 gggatcaaccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccg 605

                                                                       
Query: 306 gccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatg 365
           || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 606 gcgaagctgatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatg 665

                                                                       
Query: 366 tgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcag 425
           ||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||
Sbjct: 666 tgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccag 725

                                                                       
Query: 426 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 485
           ||||| || |||||||||||||||||||||||||||||||||||||||||    |||| |
Sbjct: 726 tacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccga-caacccaac 784

                                                                       
Query: 486 caacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgt 545
           ||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 785 caacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgt 844

                                                                       
Query: 546 caccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggaga 605
           |||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||| |||||
Sbjct: 845 caccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtat-ggaga 903

                                           
Query: 606 agttctactgggctcccacccgtgacgaccgt 637
           |||||||||||||||||||||| |||||||||
Sbjct: 904 agttctactgggctcccacccgcgacgaccgt 935

---

>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
           insert sequence
          Length = 1680

 Score =  753 bits (380), Expect = 0.0
 Identities = 571/632 (90%), Gaps = 2/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaagtac 65
           |||||||||||||||||||||||||||||||||||| |||||||||| ||  | | ||||
Sbjct: 343 ggcacccacgaggccgtcctcagctcctacgagtacctcagccagggtctcagaacgtac 402

                                                                       
Query: 66  gacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgtt 125
           ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || 
Sbjct: 403 gacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagctcgtc 462

                                                                       
Query: 126 gtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggt 185
           |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |||||
Sbjct: 463 gtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcctgggt 522

                                                                       
Query: 186 atctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatg 245
           |||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||||
Sbjct: 523 atctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaagatg 582

                                                                       
Query: 246 ggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagcca 305
           || |||||||||||||||||||| ||||||||||||||||| || ||||| |||||||| 
Sbjct: 583 gggatcaaccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccg 642

                                                                       
Query: 306 gccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatg 365
           || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 643 gcgaagctgatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatg 702

                                                                       
Query: 366 tgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcag 425
           ||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||
Sbjct: 703 tgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccag 762

                                                                       
Query: 426 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 485
           ||||| || |||||||||||||||||||||||||||||||||||||||||    |||| |
Sbjct: 763 tacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccga-caacccaac 821

                                                                       
Query: 486 caacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgt 545
           ||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 822 caacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgt 881

                                                                       
Query: 546 caccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggaga 605
           |||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||| |||||
Sbjct: 882 caccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtat-ggaga 940

                                           
Query: 606 agttctactgggctcccacccgtgacgaccgt 637
           |||||||||||||||||||||| |||||||||
Sbjct: 941 agttctactgggctcccacccgcgacgaccgt 972

---

>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
           insert sequence
          Length = 1470

 Score =  753 bits (380), Expect = 0.0
 Identities = 571/632 (90%), Gaps = 2/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaagtac 65
           |||||||||||||||||||||||||||||||||||| |||||||||| ||  | | ||||
Sbjct: 126 ggcacccacgaggccgtcctcagctcctacgagtacctcagccagggtctcagaacgtac 185

                                                                       
Query: 66  gacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgtt 125
           ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || 
Sbjct: 186 gacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagctcgtc 245

                                                                       
Query: 126 gtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggt 185
           |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |||||
Sbjct: 246 gtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcctgggt 305

                                                                       
Query: 186 atctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatg 245
           |||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||||
Sbjct: 306 atctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaagatg 365

                                                                       
Query: 246 ggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagcca 305
           || |||||||||||||||||||| ||||||||||||||||| || ||||| |||||||| 
Sbjct: 366 gggatcaaccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccg 425

                                                                       
Query: 306 gccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatg 365
           || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 426 gcgaagctgatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatg 485

                                                                       
Query: 366 tgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcag 425
           ||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||
Sbjct: 486 tgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccag 545

                                                                       
Query: 426 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 485
           ||||| || |||||||||||||||||||||||||||||||||||||||||    |||| |
Sbjct: 546 tacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccga-caacccaac 604

                                                                       
Query: 486 caacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgt 545
           ||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 605 caacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgt 664

                                                                       
Query: 546 caccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggaga 605
           |||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||| |||||
Sbjct: 665 caccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtat-ggaga 723

                                           
Query: 606 agttctactgggctcccacccgtgacgaccgt 637
           |||||||||||||||||||||| |||||||||
Sbjct: 724 agttctactgggctcccacccgcgacgaccgt 755

---

>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
           precursor, complete cds
          Length = 1706

 Score =  753 bits (380), Expect = 0.0
 Identities = 571/632 (90%), Gaps = 2/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaagtac 65
           |||||||||||||||||||||||||||||||||||| |||||||||| ||  | | ||||
Sbjct: 347 ggcacccacgaggccgtcctcagctcctacgagtacctcagccagggtctcagaacgtac 406

                                                                       
Query: 66  gacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgtt 125
           ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || 
Sbjct: 407 gacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagctcgtc 466

                                                                       
Query: 126 gtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggt 185
           |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |||||
Sbjct: 467 gtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcctgggt 526

                                                                       
Query: 186 atctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatg 245
           |||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||||
Sbjct: 527 atctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaagatg 586

                                                                       
Query: 246 ggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagcca 305
           || |||||||||||||||||||| ||||||||||||||||| || ||||| |||||||| 
Sbjct: 587 gggatcaaccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccg 646

                                                                       
Query: 306 gccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatg 365
           || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 647 gcgaagctgatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatg 706

                                                                       
Query: 366 tgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcag 425
           ||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||
Sbjct: 707 tgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccag 766

                                                                       
Query: 426 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 485
           ||||| || |||||||||||||||||||||||||||||||||||||||||    |||| |
Sbjct: 767 tacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccga-caacccaac 825

                                                                       
Query: 486 caacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgt 545
           ||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 826 caacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgt 885

                                                                       
Query: 546 caccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggaga 605
           |||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||| |||||
Sbjct: 886 caccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtat-ggaga 944

                                           
Query: 606 agttctactgggctcccacccgtgacgaccgt 637
           |||||||||||||||||||||| |||||||||
Sbjct: 945 agttctactgggctcccacccgcgacgaccgt 976

---

>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
           precursor, complete cds
          Length = 1623

 Score =  753 bits (380), Expect = 0.0
 Identities = 571/632 (90%), Gaps = 2/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaagtac 65
           |||||||||||||||||||||||||||||||||||| |||||||||| ||  | | ||||
Sbjct: 341 ggcacccacgaggccgtcctcagctcctacgagtacctcagccagggtctcagaacgtac 400

                                                                       
Query: 66  gacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgtt 125
           ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || 
Sbjct: 401 gacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagctcgtc 460

                                                                       
Query: 126 gtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggt 185
           |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |||||
Sbjct: 461 gtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcctgggt 520

                                                                       
Query: 186 atctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatg 245
           |||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||||
Sbjct: 521 atctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaagatg 580

                                                                       
Query: 246 ggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagcca 305
           || |||||||||||||||||||| ||||||||||||||||| || ||||| |||||||| 
Sbjct: 581 gggatcaaccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccg 640

                                                                       
Query: 306 gccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatg 365
           || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 641 gcgaagctgatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatg 700

                                                                       
Query: 366 tgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcag 425
           ||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||
Sbjct: 701 tgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccag 760

                                                                       
Query: 426 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 485
           ||||| || |||||||||||||||||||||||||||||||||||||||||    |||| |
Sbjct: 761 tacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccga-caacccaac 819

                                                                       
Query: 486 caacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgt 545
           ||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 820 caacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgt 879

                                                                       
Query: 546 caccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggaga 605
           |||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||| |||||
Sbjct: 880 caccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtat-ggaga 938

                                           
Query: 606 agttctactgggctcccacccgtgacgaccgt 637
           |||||||||||||||||||||| |||||||||
Sbjct: 939 agttctactgggctcccacccgcgacgaccgt 970

---

>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
           insert sequence
          Length = 1721

 Score =  745 bits (376), Expect = 0.0
 Identities = 570/632 (90%), Gaps = 2/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaagtac 65
           |||||||||||||||||||||||||||||||||||| |||||||||| ||  | | ||||
Sbjct: 354 ggcacccacgaggccgtcctcagctcctacgagtacctcagccagggtctcagaacgtac 413

                                                                       
Query: 66  gacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgtt 125
           ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || 
Sbjct: 414 gacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagctcgtc 473

                                                                       
Query: 126 gtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggt 185
           |||||  ||||||| |||||||||||||| |||||||||||| ||||||||| | |||||
Sbjct: 474 gtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcaccctgggt 533

                                                                       
Query: 186 atctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatg 245
           |||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||||
Sbjct: 534 atctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaagatg 593

                                                                       
Query: 246 ggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagcca 305
           || |||||||||||||||||||| ||||||||||||||||| || ||||| |||||||| 
Sbjct: 594 gggatcaaccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccg 653

                                                                       
Query: 306 gccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatg 365
           || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 654 gcgaagctgatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatg 713

                                                                       
Query: 366 tgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcag 425
           ||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||
Sbjct: 714 tgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccag 773

                                                                       
Query: 426 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 485
           ||||| || |||||||||||||||||||||||||||||||||||||||||    |||| |
Sbjct: 774 tacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccga-caacccaac 832

                                                                       
Query: 486 caacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgt 545
           ||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 833 caacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgt 892

                                                                       
Query: 546 caccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggaga 605
           |||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||| |||||
Sbjct: 893 caccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtat-ggaga 951

                                           
Query: 606 agttctactgggctcccacccgtgacgaccgt 637
           |||||||||||||||||||||| |||||||||
Sbjct: 952 agttctactgggctcccacccgcgacgaccgt 983

---

>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase (rca) mRNA, complete cds
          Length = 1675

 Score =  733 bits (370), Expect = 0.0
 Identities = 569/632 (90%), Gaps = 5/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaagtac 65
           |||||||||||||||||||||||||||||||||||| |||||||||| ||  | | ||||
Sbjct: 314 ggcacccacgaggccgtcctcagctcctacgagtacctcagccagggtctcagaacgtac 373

                                                                       
Query: 66  gacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgtt 125
           ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| || 
Sbjct: 374 gacttcgacaacaccatgggaggcttctacatcgccccttctttcatggacaagctcgtc 433

                                                                       
Query: 126 gtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggt 185
           |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |||||
Sbjct: 434 gtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcctgggt 493

                                                                       
Query: 186 atctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatg 245
           |||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||||
Sbjct: 494 atctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaagatg 553

                                                                       
Query: 246 ggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagcca 305
           || |||||||||||||||||||| ||||||||||||||||| || |||   |||||||| 
Sbjct: 554 gggatcaaccccatcatgatgagcgccggagagctggagagcggcaac---ggagagccg 610

                                                                       
Query: 306 gccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatg 365
           |||||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 611 gccaagctgatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatg 670

                                                                       
Query: 366 tgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcag 425
           ||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||
Sbjct: 671 tgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccag 730

                                                                       
Query: 426 tacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacc 485
           ||||| || |||||||||||||||||||||||||||||||||||||||||    |||| |
Sbjct: 731 tacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccga-caacccaac 789

                                                                       
Query: 486 caacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgt 545
           ||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 790 caacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgt 849

                                                                       
Query: 546 caccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggaga 605
           |||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||| |||||
Sbjct: 850 caccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtat-ggaga 908

                                           
Query: 606 agttctactgggctcccacccgtgacgaccgt 637
           |||||||||||||||||||||| |||||||||
Sbjct: 909 agttctactgggctcccacccgcgacgaccgt 940

---

>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  718 bits (362), Expect = 0.0
 Identities = 382/386 (98%), Gaps = 2/386 (0%)
 Strand = Plus / Plus

                                                                        
Query: 254  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6408 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 6467

                                                                        
Query: 314  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6468 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 6527

                                                                        
Query: 374  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6528 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 6587

                                                                        
Query: 434  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 6588 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccca-ccaacgtgc 6646

                                                                        
Query: 494  agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
            |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 6647 agctccctggcatgtacaacaagagggagaacccccgtgtgcccatcgtcgtcaccggta 6706

                                                                        
Query: 554  acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 6707 acgatttctcgacgctctacgctcctctgatccgtgatggtcgtat-ggagaagttctac 6765

                                      
Query: 614  tgggctcccacccgtgacgaccgtat 639
            ||||||||||||||||||||||||||
Sbjct: 6766 tgggctcccacccgtgacgaccgtat 6791



 Score =  638 bits (322), Expect = e-180
 Identities = 560/636 (88%), Gaps = 5/636 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgga 60
            |||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||
Sbjct: 3031 gcgacggcacccacgaggccatcctaagctcctacgagtacatcagccagggcctgcgga 3090

                                                                        
Query: 61   agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 120
            ||||||||||||||||||||||||  ||  | |||||||| || || |||||||||||||
Sbjct: 3091 agtacgacttcgacaacaccatggacgggctgtacatcgcgccggcattcatggacaagc 3150

                                                                        
Query: 121  ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 180
            |  | ||||| ||| |||| ||||||||||| || |||||||||||| | || |||||| 
Sbjct: 3151 tcatcgtccacctcgccaagaacttcatgacactccccaacatcaaggttcctctcatcc 3210

                                                                        
Query: 181  tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 240
            |||||||||||||||||||||| || || || || |||||||||||||| ||||||||||
Sbjct: 3211 tgggtatctggggaggcaagggacagggcaagtcgttccagtgtgagctggtgttcgcca 3270

                                                                        
Query: 241  agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 300
            |||||||||||||||||||||||||||| ||||| ||||||||||| || |||   || |
Sbjct: 3271 agatgggcatcaaccccatcatgatgagcgccggtgagctggagagcggcaac---ggcg 3327

                                                                        
Query: 301  agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 360
            |||| |||||||| ||| ||||| ||||||| ||||| || ||||| ||||| ||||| |
Sbjct: 3328 agccggccaagctgatccggcagaggtaccgcgaggcggccgacattatcaacaagggca 3387

                                                                        
Query: 361  agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 420
            ||||||||||||||||||||||||| || ||||| || |||||  |||||||||| || |
Sbjct: 3388 agatgtgctgcctcttcatcaacgacctggacgccggcgcgggccggatgggcgggacga 3447

                                                                        
Query: 421  cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 480
            |||||||||| || |||||||||||||||||||||||||||||||||||||| || || |
Sbjct: 3448 cgcagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgcggacgcgc 3507

                                                                        
Query: 481  ccacccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 540
            ||| |||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 3508 cca-ccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgcgtgcccatc 3566

                                                                        
Query: 541  gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 600
             |||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || 
Sbjct: 3567 atcgtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgacgggcgcat- 3625

                                                
Query: 601  ggagaagttctactgggctcccacccgtgacgaccg 636
            |||||||||||||||||| |||||||| || |||||
Sbjct: 3626 ggagaagttctactgggcgcccacccgcgaggaccg 3661



 Score =  325 bits (164), Expect = 1e-85
 Identities = 164/164 (100%)
 Strand = Plus / Plus

                                                                        
Query: 4    acggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaagt 63
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5757 acggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaagt 5816

                                                                        
Query: 64   acgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttg 123
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5817 acgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttg 5876

                                                        
Query: 124  ttgtccatctctccaaaaacttcatgaccctgcccaacatcaag 167
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5877 ttgtccatctctccaaaaacttcatgaccctgcccaacatcaag 5920



 Score =  174 bits (88), Expect = 2e-40
 Identities = 88/88 (100%)
 Strand = Plus / Plus

                                                                        
Query: 166  agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6070 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 6129

                                        
Query: 226  agcttgtgttcgccaagatgggcatcaa 253
            ||||||||||||||||||||||||||||
Sbjct: 6130 agcttgtgttcgccaagatgggcatcaa 6157

---

>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
           insert sequence
          Length = 1682

 Score =  710 bits (358), Expect = 0.0
 Identities = 549/610 (90%), Gaps = 2/610 (0%)
 Strand = Plus / Plus

                                                                       
Query: 28  gctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggag 87
           |||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||||||
Sbjct: 327 gctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatgggag 386

                                                                       
Query: 88  gcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttca 147
           ||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||||||
Sbjct: 387 gcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaacttca 446

                                                                       
Query: 148 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 207
           ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| |
Sbjct: 447 tgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtcagg 506

                                                                       
Query: 208 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 267
           ||||||| |||||||||||||| || |||||||||||||| |||||||||||||||||||
Sbjct: 507 gaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatgatga 566

                                                                       
Query: 268 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 327
           | ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||||||
Sbjct: 567 gcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggt 626

                                                                       
Query: 328 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 387
           |||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 627 accgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatc 686

                                                                       
Query: 388 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatgg 447
           | ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||||||||||
Sbjct: 687 tggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatgg 746

                                                                       
Query: 448 tgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccctggcatg 507
           ||||||||||||||||||||||||||||    |||| |||||||||||||||| || |||
Sbjct: 747 tgaacgccaccctgatgaacatcgccga-caacccaaccaacgtgcagctccccgggatg 805

                                                                       
Query: 508 tacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacg 567
           |||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| |||
Sbjct: 806 tacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacg 865

                                                                       
Query: 568 ctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctcccacccg 627
           || ||||| || || |||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 866 ctgtacgcgccgctcatccgtgacgggcgtat-ggagaagttctactgggctcccacccg 924

                     
Query: 628 tgacgaccgt 637
            |||||||||
Sbjct: 925 cgacgaccgt 934

---

>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  638 bits (322), Expect = e-180
 Identities = 560/636 (88%), Gaps = 5/636 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgga 60
            |||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||
Sbjct: 462  gcgacggcacccacgaggccatcctaagctcctacgagtacatcagccagggcctgcgga 521

                                                                        
Query: 61   agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 120
            ||||||||||||||||||||||||  ||  | |||||||| || || |||||||||||||
Sbjct: 522  agtacgacttcgacaacaccatggacgggctgtacatcgcgccggcattcatggacaagc 581

                                                                        
Query: 121  ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 180
            |  | ||||| ||| |||| ||||||||||| || |||||||||||| | || |||||| 
Sbjct: 582  tcatcgtccacctcgccaagaacttcatgacactccccaacatcaaggttcctctcatcc 641

                                                                        
Query: 181  tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 240
            |||||||||||||||||||||| || || || || |||||||||||||| ||||||||||
Sbjct: 642  tgggtatctggggaggcaagggacagggcaagtcgttccagtgtgagctggtgttcgcca 701

                                                                        
Query: 241  agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 300
            |||||||||||||||||||||||||||| ||||| ||||||||||| || |||   || |
Sbjct: 702  agatgggcatcaaccccatcatgatgagcgccggtgagctggagagcggcaac---ggcg 758

                                                                        
Query: 301  agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 360
            |||| |||||||| ||| ||||| ||||||| ||||| || ||||| ||||| ||||| |
Sbjct: 759  agccggccaagctgatccggcagaggtaccgcgaggcggccgacattatcaacaagggca 818

                                                                        
Query: 361  agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 420
            ||||||||||||||||||||||||| || ||||| || |||||  |||||||||| || |
Sbjct: 819  agatgtgctgcctcttcatcaacgacctggacgccggcgcgggccggatgggcgggacga 878

                                                                        
Query: 421  cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 480
            |||||||||| || |||||||||||||||||||||||||||||||||||||| || || |
Sbjct: 879  cgcagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgcggacgcgc 938

                                                                        
Query: 481  ccacccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 540
            ||| |||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 939  cca-ccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgcgtgcccatc 997

                                                                        
Query: 541  gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 600
             |||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || || 
Sbjct: 998  atcgtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgacgggcgcat- 1056

                                                
Query: 601  ggagaagttctactgggctcccacccgtgacgaccg 636
            |||||||||||||||||| |||||||| || |||||
Sbjct: 1057 ggagaagttctactgggcgcccacccgcgaggaccg 1092

---

>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B
           (RcaB) mRNA, complete cds; nuclear gene for chloroplast
           product
          Length = 1525

 Score =  634 bits (320), Expect = e-179
 Identities = 559/636 (87%), Gaps = 2/636 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgga 60
           |||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||| |
Sbjct: 309 gcgacggcacccacgaggccatcctgagctcctacgagtacatcagccagggcctgcgca 368

                                                                       
Query: 61  agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 120
           ||||||||||||||||||||||||  ||  | |||||||| || || |||||||||||||
Sbjct: 369 agtacgacttcgacaacaccatggacgggctgtacatcgccccggcgttcatggacaagc 428

                                                                       
Query: 121 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 180
           |  | ||||| ||| |||| ||||||||||| || |||||||||||| |||| |||||| 
Sbjct: 429 tcatcgtccacctcgccaagaacttcatgacactccccaacatcaaggtccctctcatcc 488

                                                                       
Query: 181 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 240
           |||||||||||||||||||||| || || || || |||||||| ||||| ||||||||||
Sbjct: 489 tgggtatctggggaggcaagggacagggcaagtcgttccagtgcgagctggtgttcgcca 548

                                                                       
Query: 241 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 300
           |||||||||||||||||||||||||||| ||||||||||||||||| || ||||| || |
Sbjct: 549 agatgggcatcaaccccatcatgatgagcgccggagagctggagagcggcaacgccggcg 608

                                                                       
Query: 301 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 360
           |||| |||||||| ||| ||||| ||||||| |||||||| ||||| ||||||||||| |
Sbjct: 609 agccggccaagctgatccggcagaggtaccgcgaggctgccgacattatcaagaagggca 668

                                                                       
Query: 361 agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 420
           ||||||||||||||||||||||||| || ||||| || |||||  |||||||||| || |
Sbjct: 669 agatgtgctgcctcttcatcaacgacctggacgccggcgcggggcggatgggcgggacga 728

                                                                       
Query: 421 cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 480
           |||||||||| || |||||||||||||||||||||||||||||||||||||| || || |
Sbjct: 729 cgcagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgcggacgcgc 788

                                                                       
Query: 481 ccacccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 540
           ||| ||||||||||| |||| || ||||||||||||||||||||||| || |||||||||
Sbjct: 789 cca-ccaacgtgcagttcccggggatgtacaacaaggaggagaacccacgcgtgcccatc 847

                                                                       
Query: 541 gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 600
            |||||||||| ||||| ||||||||||| ||||| || || ||||| || || || || 
Sbjct: 848 atcgtcaccggcaacgacttctcgacgctgtacgcgcccctcatccgggacggccgcat- 906

                                               
Query: 601 ggagaagttctactgggctcccacccgtgacgaccg 636
           |||||||||||||||||| |||||||| || |||||
Sbjct: 907 ggagaagttctactgggcgcccacccgggaggaccg 942

---

>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  557 bits (281), Expect = e-155
 Identities = 541/625 (86%), Gaps = 2/625 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgga 60
           ||||||| |||||| |  ||||||| ||||||||||||||| |||||   || || ||  
Sbjct: 296 gcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccgct 355

                                                                       
Query: 61  agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 120
            || | |||| ||||||||| ||   || || ||||||||||| || |||||||||||||
Sbjct: 356 cgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaagc 415

                                                                       
Query: 121 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 180
           |||| || ||  || |||| |||||||||| | |||||||||||||||| || ||||| |
Sbjct: 416 ttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcattt 475

                                                                       
Query: 181 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 240
           ||||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||||||
Sbjct: 476 tgggtatctggggaggcaaaggtcaagggaaatccttccaatgtgaacttgtgttcgcca 535

                                                                       
Query: 241 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 300
           ||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| ||||
Sbjct: 536 agatgggaatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccggag 595

                                                                       
Query: 301 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 360
           |||| || ||||| ||| ||||||||||||||||||| || ||||| |||| |||||| |
Sbjct: 596 agccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatcaggaagggga 655

                                                                       
Query: 361 agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 420
           |||||||||||||||||||||||||||| || || ||||| ||  |||||||||| ||||
Sbjct: 656 agatgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcacca 715

                                                                       
Query: 421 cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 480
           | |||||||||||||||||||||||||||||||||||||| ||||||||||||||   ||
Sbjct: 716 cccagtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatcgccgacaacc 775

                                                                       
Query: 481 ccacccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 540
           ||| ||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||||
Sbjct: 776 cca-ccaacgtccagctccccggcatgtacaacaagcaagagaacccccgcgtgcccatc 834

                                                                       
Query: 541 gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 600
            |||||||||| ||||| ||||| || |||||||| || || |||||||| |||||||| 
Sbjct: 835 atcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtat- 893

                                    
Query: 601 ggagaagttctactgggctcccacc 625
           |||||||||||||||||||||||||
Sbjct: 894 ggagaagttctactgggctcccacc 918

---

>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  557 bits (281), Expect = e-155
 Identities = 541/625 (86%), Gaps = 2/625 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgga 60
           ||||||| |||||| |  ||||||| ||||||||||||||| |||||   || || ||  
Sbjct: 159 gcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccgct 218

                                                                       
Query: 61  agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 120
            || | |||| ||||||||| ||   || || ||||||||||| || |||||||||||||
Sbjct: 219 cgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaagc 278

                                                                       
Query: 121 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 180
           |||| || ||  || |||| |||||||||| | |||||||||||||||| || ||||| |
Sbjct: 279 ttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcattt 338

                                                                       
Query: 181 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 240
           ||||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||||||
Sbjct: 339 tgggtatctggggaggcaaaggtcaagggaaatccttccaatgtgaacttgtgttcgcca 398

                                                                       
Query: 241 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 300
           ||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| ||||
Sbjct: 399 agatgggaatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccggag 458

                                                                       
Query: 301 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 360
           |||| || ||||| ||| ||||||||||||||||||| || ||||| |||| |||||| |
Sbjct: 459 agccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatcaggaagggga 518

                                                                       
Query: 361 agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 420
           |||||||||||||||||||||||||||| || || ||||| ||  |||||||||| ||||
Sbjct: 519 agatgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcacca 578

                                                                       
Query: 421 cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 480
           | |||||||||||||||||||||||||||||||||||||| ||||||||||||||   ||
Sbjct: 579 cccagtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatcgccgacaacc 638

                                                                       
Query: 481 ccacccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 540
           ||| ||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||||
Sbjct: 639 cca-ccaacgtccagctccccggcatgtacaacaagcaagagaacccccgcgtgcccatc 697

                                                                       
Query: 541 gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 600
            |||||||||| ||||| ||||| || |||||||| || || |||||||| |||||||| 
Sbjct: 698 atcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtat- 756

                                    
Query: 601 ggagaagttctactgggctcccacc 625
           |||||||||||||||||||||||||
Sbjct: 757 ggagaagttctactgggctcccacc 781

---

>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  557 bits (281), Expect = e-155
 Identities = 472/533 (88%), Gaps = 2/533 (0%)
 Strand = Plus / Plus

                                                                       
Query: 93  tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 152
           ||||||||||| || ||||||||||||||||| || ||  || |||| |||||||||| |
Sbjct: 87  tacatcgctccggccttcatggacaagcttgtcgttcacatcaccaagaacttcatgaac 146

                                                                       
Query: 153 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 212
            |||||||||||||||| || ||||| |||||||||||||||||||| ||||| || |||
Sbjct: 147 ttgcccaacatcaagattcctctcattttgggtatctggggaggcaaaggtcaggggaaa 206

                                                                       
Query: 213 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 272
           || ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 207 tccttccaatgtgaacttgtgttcgccaagatgggaatcaaccccatcatgatgagcgcc 266

                                                                       
Query: 273 ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 332
           || ||||||||||| || ||||| |||||||| || ||||| ||| ||||||||||||||
Sbjct: 267 ggtgagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgt 326

                                                                       
Query: 333 gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 392
           ||||| || ||||| |||| |||||| ||||||||||||||||||||||||||||| || 
Sbjct: 327 gaggccgccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgat 386

                                                                       
Query: 393 gctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaac 452
           || ||||| ||  |||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 387 gccggtgccggccggatgggcggcaccacccagtacaccgtcaacaaccagatggtgaac 446

                                                                       
Query: 453 gccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccctggcatgtacaa 512
           |||||||| ||||||||||||||   ||||| ||||||| |||||||| |||||||||||
Sbjct: 447 gccaccctcatgaacatcgccgacaacccca-ccaacgtccagctccccggcatgtacaa 505

                                                                       
Query: 513 caaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctcta 572
           |||| ||||||||||||| ||||||||| |||||||||| ||||| ||||| || |||||
Sbjct: 506 caagcaggagaacccccgcgtgcccatcatcgtcaccggcaacgacttctccaccctcta 565

                                                                
Query: 573 cgctcctctgatccgtgatggtcgtatgggagaagttctactgggctcccacc 625
           ||| || || |||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 566 cgcccccctcatccgtgacggtcgtat-ggagaagttctactgggctcccacc 617

---

>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  557 bits (281), Expect = e-155
 Identities = 541/625 (86%), Gaps = 2/625 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgga 60
           ||||||| |||||| |  ||||||| ||||||||||||||| |||||   || || ||  
Sbjct: 189 gcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccgct 248

                                                                       
Query: 61  agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 120
            || | |||| ||||||||| ||   || || ||||||||||| || |||||||||||||
Sbjct: 249 cgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaagc 308

                                                                       
Query: 121 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 180
           |||| || ||  || |||| |||||||||| | |||||||||||||||| || ||||| |
Sbjct: 309 ttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcattt 368

                                                                       
Query: 181 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 240
           ||||||||||||||||||| ||||| || ||||| ||||| ||||| |||||||||||||
Sbjct: 369 tgggtatctggggaggcaaaggtcaggggaaatccttccaatgtgaacttgtgttcgcca 428

                                                                       
Query: 241 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 300
           ||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| ||||
Sbjct: 429 agatgggaatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccggag 488

                                                                       
Query: 301 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 360
           |||| || ||||| ||| ||||||||||||||||||| || ||||| |||| |||||| |
Sbjct: 489 agccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatcaggaagggga 548

                                                                       
Query: 361 agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 420
           |||||||||||||||||||||||||||| || || ||||| ||  |||||||||| ||||
Sbjct: 549 agatgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcacca 608

                                                                       
Query: 421 cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 480
           | |||||||||||||||||||||||||||||||||||||| ||||||||||||||   ||
Sbjct: 609 cccagtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatcgccgacaacc 668

                                                                       
Query: 481 ccacccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 540
           ||| ||||||| |||||||| ||||||||||||||| ||||||||||||| |||||||||
Sbjct: 669 cca-ccaacgtccagctccccggcatgtacaacaagcaggagaacccccgcgtgcccatc 727

                                                                       
Query: 541 gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 600
            |||||||||| ||||| ||||| || |||||||| || || |||||||| |||||||| 
Sbjct: 728 atcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtat- 786

                                    
Query: 601 ggagaagttctactgggctcccacc 625
           |||||||||||||||||||||||||
Sbjct: 787 ggagaagttctactgggctcccacc 811

---

>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
           precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  519 bits (262), Expect = e-144
 Identities = 543/634 (85%), Gaps = 2/634 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   gacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaag 62
           |||||||||||||  ||||| |||||||||||||| ||| ||||||||||||    |   
Sbjct: 312 gacggcacccacgtcgccgtgctcagctcctacgactacatcagccagggccaaaagtct 371

                                                                       
Query: 63  tacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagctt 122
           ||| ||||||||||||  ||||  ||||||||||| ||    |  |||||||||||||| 
Sbjct: 372 tacaacttcgacaacatgatggatggcttctacatagccaagggcttcatggacaagctc 431

                                                                       
Query: 123 gttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttg 182
           || ||||| |||||||| ||||||||||||||||| ||||||||| | || |||||| ||
Sbjct: 432 gtcgtccacctctccaagaacttcatgaccctgccaaacatcaaggttcccctcatcctg 491

                                                                       
Query: 183 ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 242
           ||||||||||||||||| || || |||||||| ||||| || ||||| || |||||||||
Sbjct: 492 ggtatctggggaggcaaaggccagggaaaatcgttccaatgcgagctggtcttcgccaag 551

                                                                       
Query: 243 atgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagag 302
           |||||||||| ||||||||||||||| ||||| ||||||||||| || ||||| ||||||
Sbjct: 552 atgggcatcacccccatcatgatgagcgccggcgagctggagagcggcaacgccggagag 611

                                                                       
Query: 303 ccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaag 362
           || |||||||||||||||||||| |||||||||||  | ||| | ||||||||||| |||
Sbjct: 612 cccgccaagctcatcaggcagcgctaccgtgaggcctccgacctcatcaagaagggcaag 671

                                                                       
Query: 363 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 422
           |||| ||||||||||||||||||  | ||||| || |||||| | |||||||| ||||| 
Sbjct: 672 atgtcctgcctcttcatcaacgacttggacgccggcgcgggtcgcatgggcggcaccacc 731

                                                                       
Query: 423 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 482
           |||||||| || |||||||||||||| ||||||||||||||||||||||||||   ||||
Sbjct: 732 cagtacacggtgaacaaccagatggtcaacgccaccctgatgaacatcgccgacaacccc 791

                                                                       
Query: 483 acccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 542
           | |||||||||||||||| || ||||||||||||||||| |||||||| ||||||||| |
Sbjct: 792 a-ccaacgtgcagctcccggggatgtacaacaaggaggacaacccccgcgtgcccatcat 850

                                                                       
Query: 543 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggg 602
           ||||||||| ||||| ||||| ||||||||||| || || ||||| || || || || ||
Sbjct: 851 cgtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcat-gg 909

                                             
Query: 603 agaagttctactgggctcccacccgtgacgaccg 636
           |||||||||||||||| |||||||| || |||||
Sbjct: 910 agaagttctactgggcgcccacccgcgaggaccg 943

---

>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score =  502 bits (253), Expect = e-139
 Identities = 462/529 (87%), Gaps = 2/529 (0%)
 Strand = Plus / Plus

                                                                       
Query: 108 ttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaag 167
           |||||||||||||| || ||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 22  ttcatggacaagctcgtcgtccacctctccaagaacttcatgaccctgccaaacatcaag 81

                                                                       
Query: 168 atcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgag 227
            | || |||||| ||||||||||||||||||| || || |||||||| ||||| || |||
Sbjct: 82  gttcccctcatcctgggtatctggggaggcaaaggccagggaaaatcgttccaatgcgag 141

                                                                       
Query: 228 cttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctggagagt 287
           || || ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| 
Sbjct: 142 ctggtcttcgccaagatgggcatcacccccatcatgatgagcgccggcgagctggagagc 201

                                                                       
Query: 288 gggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatg 347
           || ||||| |||||||| |||||||||||||||||||| |||||||||||  | ||| | 
Sbjct: 202 ggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgaggcctccgacctc 261

                                                                       
Query: 348 atcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtagg 407
           ||||||||||| ||||||| ||||||||||||||||||  | ||||| || |||||| | 
Sbjct: 262 atcaagaagggcaagatgtcctgcctcttcatcaacgacttggacgccggcgcgggtcgc 321

                                                                       
Query: 408 atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 467
           |||||||| ||||| |||||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 322 atgggcggcaccacccagtacacggtgaacaaccagatggtcaacgccaccctgatgaac 381

                                                                       
Query: 468 atcgccgatgcccccacccaacgtgcagctccctggcatgtacaacaaggaggagaaccc 527
           ||||||||   ||||| |||||||||||||||| || ||||||||||||||||| |||||
Sbjct: 382 atcgccgacaacccca-ccaacgtgcagctcccggggatgtacaacaaggaggacaaccc 440

                                                                       
Query: 528 ccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccg 587
           ||| ||||||||| |||||||||| ||||| ||||| ||||||||||| || || |||||
Sbjct: 441 ccgcgtgcccatcatcgtcaccggcaacgacttctccacgctctacgcgccgctcatccg 500

                                                            
Query: 588 tgatggtcgtatgggagaagttctactgggctcccacccgtgacgaccg 636
            || || || || |||||||||||||||||| |||||||| || |||||
Sbjct: 501 cgacggccgcat-ggagaagttctactgggcgcccacccgcgaggaccg 548

---

>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.2 mRNA, complete cds
          Length = 1815

 Score =  474 bits (239), Expect = e-130
 Identities = 526/619 (84%), Gaps = 2/619 (0%)
 Strand = Plus / Plus

                                                                        
Query: 21   gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 80
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 496  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 555

                                                                        
Query: 81   atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 140
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 556  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 615

                                                                        
Query: 141  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 200
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 616  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 675

                                                                        
Query: 201  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 260
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 676  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 735

                                                                        
Query: 261  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 320
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 736  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 795

                                                                        
Query: 321  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 380
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 796  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 855

                                                                        
Query: 381  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 440
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||||
Sbjct: 856  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaac 915

                                                                        
Query: 441  cagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccc 500
            |||||||| ||||| || || |||||||| || |||   |||| ||||||| ||||||||
Sbjct: 916  cagatggttaacgcaacactcatgaacattgctgat-aacccaaccaacgtccagctccc 974

                                                                        
Query: 501  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 560
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 975  aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 1034

                                                                        
Query: 561  ctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctc 620
            ||| || || ||||||||||| ||||||||||| ||||| |||||||||||||||||| |
Sbjct: 1035 ctccaccctatacgctcctctcatccgtgatggacgtat-ggagaagttctactgggccc 1093

                               
Query: 621  ccacccgtgacgaccgtat 639
            | |||||||| ||||||||
Sbjct: 1094 cgacccgtgaagaccgtat 1112

---

>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.3 mRNA, complete cds
          Length = 1928

 Score =  474 bits (239), Expect = e-130
 Identities = 526/619 (84%), Gaps = 2/619 (0%)
 Strand = Plus / Plus

                                                                        
Query: 21   gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 80
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 496  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 555

                                                                        
Query: 81   atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 140
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 556  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 615

                                                                        
Query: 141  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 200
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 616  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 675

                                                                        
Query: 201  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 260
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 676  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 735

                                                                        
Query: 261  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 320
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 736  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 795

                                                                        
Query: 321  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 380
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 796  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 855

                                                                        
Query: 381  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 440
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||||
Sbjct: 856  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaac 915

                                                                        
Query: 441  cagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccc 500
            |||||||| ||||| || || |||||||| || |||   |||| ||||||| ||||||||
Sbjct: 916  cagatggttaacgcaacactcatgaacattgctgat-aacccaaccaacgtccagctccc 974

                                                                        
Query: 501  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 560
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 975  aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 1034

                                                                        
Query: 561  ctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctc 620
            ||| || || ||||||||||| ||||||||||| ||||| |||||||||||||||||| |
Sbjct: 1035 ctccaccctatacgctcctctcatccgtgatggacgtat-ggagaagttctactgggccc 1093

                               
Query: 621  ccacccgtgacgaccgtat 639
            | |||||||| ||||||||
Sbjct: 1094 cgacccgtgaagaccgtat 1112

---

>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.1 mRNA, complete cds
          Length = 1833

 Score =  474 bits (239), Expect = e-130
 Identities = 526/619 (84%), Gaps = 2/619 (0%)
 Strand = Plus / Plus

                                                                        
Query: 21   gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 80
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 525  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 584

                                                                        
Query: 81   atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 140
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 585  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 644

                                                                        
Query: 141  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 200
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 645  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 704

                                                                        
Query: 201  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 260
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 705  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 764

                                                                        
Query: 261  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 320
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 765  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 824

                                                                        
Query: 321  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 380
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 825  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 884

                                                                        
Query: 381  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 440
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||||
Sbjct: 885  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaac 944

                                                                        
Query: 441  cagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccc 500
            |||||||| ||||| || || |||||||| || |||   |||| ||||||| ||||||||
Sbjct: 945  cagatggttaacgcaacactcatgaacattgctgat-aacccaaccaacgtccagctccc 1003

                                                                        
Query: 501  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 560
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 1004 aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 1063

                                                                        
Query: 561  ctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctc 620
            ||| || || ||||||||||| ||||||||||| ||||| |||||||||||||||||| |
Sbjct: 1064 ctccaccctatacgctcctctcatccgtgatggacgtat-ggagaagttctactgggccc 1122

                               
Query: 621  ccacccgtgacgaccgtat 639
            | |||||||| ||||||||
Sbjct: 1123 cgacccgtgaagaccgtat 1141

---

>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein
            (At2g39730) mRNA, complete cds
          Length = 1697

 Score =  474 bits (239), Expect = e-130
 Identities = 526/619 (84%), Gaps = 2/619 (0%)
 Strand = Plus / Plus

                                                                        
Query: 21   gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 80
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 407  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 466

                                                                        
Query: 81   atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 140
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 467  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 526

                                                                        
Query: 141  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 200
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 527  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 586

                                                                        
Query: 201  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 260
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 587  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 646

                                                                        
Query: 261  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 320
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 647  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 706

                                                                        
Query: 321  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 380
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 707  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 766

                                                                        
Query: 381  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 440
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||||
Sbjct: 767  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaac 826

                                                                        
Query: 441  cagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccc 500
            |||||||| ||||| || || |||||||| || |||   |||| ||||||| ||||||||
Sbjct: 827  cagatggttaacgcaacactcatgaacattgctgat-aacccaaccaacgtccagctccc 885

                                                                        
Query: 501  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 560
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 886  aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 945

                                                                        
Query: 561  ctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctc 620
            ||| || || ||||||||||| ||||||||||| ||||| |||||||||||||||||| |
Sbjct: 946  ctccaccctatacgctcctctcatccgtgatggacgtat-ggagaagttctactgggccc 1004

                               
Query: 621  ccacccgtgacgaccgtat 639
            | |||||||| ||||||||
Sbjct: 1005 cgacccgtgaagaccgtat 1023

---

>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds
          Length = 1674

 Score =  474 bits (239), Expect = e-130
 Identities = 526/619 (84%), Gaps = 2/619 (0%)
 Strand = Plus / Plus

                                                                        
Query: 21   gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 80
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 410  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 469

                                                                        
Query: 81   atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 140
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 470  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 529

                                                                        
Query: 141  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 200
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 530  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 589

                                                                        
Query: 201  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 260
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 590  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 649

                                                                        
Query: 261  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 320
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 650  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 709

                                                                        
Query: 321  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 380
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 710  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 769

                                                                        
Query: 381  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 440
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||||
Sbjct: 770  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaac 829

                                                                        
Query: 441  cagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccc 500
            |||||||| ||||| || || |||||||| || |||   |||| ||||||| ||||||||
Sbjct: 830  cagatggttaacgcaacactcatgaacattgctgat-aacccaaccaacgtccagctccc 888

                                                                        
Query: 501  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 560
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 889  aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 948

                                                                        
Query: 561  ctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctc 620
            ||| || || ||||||||||| ||||||||||| ||||| |||||||||||||||||| |
Sbjct: 949  ctccaccctatacgctcctctcatccgtgatggacgtat-ggagaagttctactgggccc 1007

                               
Query: 621  ccacccgtgacgaccgtat 639
            | |||||||| ||||||||
Sbjct: 1008 cgacccgtgaagaccgtat 1026

---

>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1655

 Score =  474 bits (239), Expect = e-130
 Identities = 526/619 (84%), Gaps = 2/619 (0%)
 Strand = Plus / Plus

                                                                        
Query: 21   gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 80
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 407  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 466

                                                                        
Query: 81   atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 140
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 467  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 526

                                                                        
Query: 141  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 200
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 527  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 586

                                                                        
Query: 201  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 260
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 587  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 646

                                                                        
Query: 261  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 320
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 647  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 706

                                                                        
Query: 321  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 380
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 707  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 766

                                                                        
Query: 381  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 440
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||||
Sbjct: 767  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaac 826

                                                                        
Query: 441  cagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccc 500
            |||||||| ||||| || || |||||||| || |||   |||| ||||||| ||||||||
Sbjct: 827  cagatggttaacgcaacactcatgaacattgctgat-aacccaaccaacgtccagctccc 885

                                                                        
Query: 501  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 560
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 886  aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 945

                                                                        
Query: 561  ctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctc 620
            ||| || || ||||||||||| ||||||||||| ||||| |||||||||||||||||| |
Sbjct: 946  ctccaccctatacgctcctctcatccgtgatggacgtat-ggagaagttctactgggccc 1004

                               
Query: 621  ccacccgtgacgaccgtat 639
            | |||||||| ||||||||
Sbjct: 1005 cgacccgtgaagaccgtat 1023

---

>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds
          Length = 1674

 Score =  474 bits (239), Expect = e-130
 Identities = 526/619 (84%), Gaps = 2/619 (0%)
 Strand = Plus / Plus

                                                                        
Query: 21   gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 80
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 410  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 469

                                                                        
Query: 81   atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 140
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 470  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 529

                                                                        
Query: 141  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 200
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 530  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 589

                                                                        
Query: 201  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 260
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 590  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 649

                                                                        
Query: 261  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 320
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 650  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 709

                                                                        
Query: 321  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 380
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 710  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 769

                                                                        
Query: 381  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 440
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||||
Sbjct: 770  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaac 829

                                                                        
Query: 441  cagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccc 500
            |||||||| ||||| || || |||||||| || |||   |||| ||||||| ||||||||
Sbjct: 830  cagatggttaacgcaacactcatgaacattgctgat-aacccaaccaacgtccagctccc 888

                                                                        
Query: 501  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 560
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 889  aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 948

                                                                        
Query: 561  ctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctc 620
            ||| || || ||||||||||| ||||||||||| ||||| |||||||||||||||||| |
Sbjct: 949  ctccaccctatacgctcctctcatccgtgatggacgtat-ggagaagttctactgggccc 1007

                               
Query: 621  ccacccgtgacgaccgtat 639
            | |||||||| ||||||||
Sbjct: 1008 cgacccgtgaagaccgtat 1026

---

>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 1 mRNA, complete cds
          Length = 1559

 Score =  474 bits (239), Expect = e-130
 Identities = 511/599 (85%), Gaps = 2/599 (0%)
 Strand = Plus / Plus

                                                                       
Query: 27  agctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatggga 86
           |||||||| |||||| | ||||| ||||| || |  |||||||| ||||||| |||||  
Sbjct: 397 agctcctatgagtacattagccaaggccttcgcacatacgacttggacaacaacatggat 456

                                                                       
Query: 87  ggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttc 146
           || |||||||| || || ||||||||||||||||||||||| ||  || |||| |||| |
Sbjct: 457 ggattctacattgccccagctttcatggacaagcttgttgttcacatcaccaagaactac 516

                                                                       
Query: 147 atgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaa 206
           |||||||| || ||||| ||| | || || ||||||||||| ||||||||||| ||||||
Sbjct: 517 atgacccttcctaacattaaggttcctcttatcttgggtatttggggaggcaaaggtcaa 576

                                                                       
Query: 207 ggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatg 266
           |||||||| ||||| ||||||||||| || ||||||||||| ||||||||||| ||||||
Sbjct: 577 ggaaaatctttccaatgtgagcttgtctttgccaagatgggaatcaaccccattatgatg 636

                                                                       
Query: 267 agtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcgg 326
           |||||||||||  |||| ||||||||||| ||||| ||||||||| | ||||||||  ||
Sbjct: 637 agtgccggagaattggaaagtgggaacgccggagaaccagccaagttgatcaggcaaagg 696

                                                                       
Query: 327 taccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgat 386
           ||||||||||| || ||||| |||||||| || || ||||| |||||||| |||||||||
Sbjct: 697 taccgtgaggccgccgacattatcaagaaagggaaaatgtgttgcctctttatcaacgat 756

                                                                       
Query: 387 cttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatg 446
           || |||||||| || ||| | ||||| |||||||| || ||||| || |||||||| |||
Sbjct: 757 ctcgacgctggagccggtcgtatgggaggaaccacacaatacacagtgaacaaccaaatg 816

                                                                       
Query: 447 gtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccctggcat 506
           ||||||||||| || ||||||||||| |||  ||||| ||||||| |||||||| || ||
Sbjct: 817 gtgaacgccacactcatgaacatcgctgataacccca-ccaacgttcagctccccggtat 875

                                                                       
Query: 507 gtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgac 566
           |||||||||||| |||||||| ||||| || ||| | |||||||||||||||||||||||
Sbjct: 876 gtacaacaaggaagagaaccctcgtgttccgatcattgtcaccggtaacgatttctcgac 935

                                                                      
Query: 567 gctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctcccacc 625
           ||| ||||| || || |||||||| |||||||| ||||||||| |||||||| ||||||
Sbjct: 936 gctgtacgcgccgctcatccgtgacggtcgtat-ggagaagttttactgggcacccacc 993

---

>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase alpha 2 mRNA, complete cds
          Length = 1433

 Score =  466 bits (235), Expect = e-128
 Identities = 471/547 (86%), Gaps = 2/547 (0%)
 Strand = Plus / Plus

                                                                       
Query: 72  gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccat 131
           ||||||| |||||  || |||||||| |||||||| |||||||||||||||||||| || 
Sbjct: 256 gacaacaacatggatggtttctacattgctcctgcattcatggacaagcttgttgttcac 315

                                                                       
Query: 132 ctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgg 191
            || |||| ||||||||| |||| || ||||| ||| | || || ||||||||||| |||
Sbjct: 316 atcaccaagaacttcatgtccctccctaacattaaggttcctctaatcttgggtatttgg 375

                                                                       
Query: 192 ggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatc 251
           |||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| |||
Sbjct: 376 ggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgccaagatgggtatc 435

                                                                       
Query: 252 aaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaag 311
           |||||||||||||||||||||||||| ||||| ||||| ||||| || || |||||||||
Sbjct: 436 aaccccatcatgatgagtgccggagaactggaaagtggaaacgccggtgaaccagccaag 495

                                                                       
Query: 312 ctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc 371
            | ||||||||  |||||||||| ||||| ||||| ||||| ||||| || ||||||  |
Sbjct: 496 ttgatcaggcaaaggtaccgtgaagctgccgacataatcaaaaagggcaaaatgtgcgcc 555

                                                                       
Query: 372 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 431
           |||||||| |||||||| || |||||||| ||| | ||||| |||||||| || ||||||
Sbjct: 556 ctcttcattaacgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacacc 615

                                                                       
Query: 432 gtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgt 491
           ||||||||||||||||| || || ||||| |||||||||||||||  ||||| |||||||
Sbjct: 616 gtcaacaaccagatggttaatgctaccctcatgaacatcgccgataacccca-ccaacgt 674

                                                                       
Query: 492 gcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccgg 551
            |||||||| || |||||||||||||| |||||||||||||| |||||  ||||||| ||
Sbjct: 675 ccagctccccggtatgtacaacaaggaagagaacccccgtgtccccattatcgtcactgg 734

                                                                       
Query: 552 taacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttct 611
           |||||||||||| || || || |||||||| |||||||| |||||||| |||||| || |
Sbjct: 735 taacgatttctccacactgtatgctcctctcatccgtgacggtcgtat-ggagaaatttt 793

                  
Query: 612 actgggc 618
           |||||||
Sbjct: 794 actgggc 800

---

>gb|BT000613.1| Arabidopsis thaliana Rubsico activase  (At2g39730/T5I7.3) mRNA,
           complete cds
          Length = 1425

 Score =  466 bits (235), Expect = e-128
 Identities = 525/619 (84%), Gaps = 2/619 (0%)
 Strand = Plus / Plus

                                                                       
Query: 21  gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 80
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 322 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 381

                                                                       
Query: 81  atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 140
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 382 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 441

                                                                       
Query: 141 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 200
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 442 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 501

                                                                       
Query: 201 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 260
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 502 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 561

                                                                       
Query: 261 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 320
           ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 562 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 621

                                                                       
Query: 321 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 380
           ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||| |||||
Sbjct: 622 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcctcatc 681

                                                                       
Query: 381 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 440
           |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||||
Sbjct: 682 aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaac 741

                                                                       
Query: 441 cagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccc 500
           |||||||| ||||| || || |||||||| || |||   |||| ||||||| ||||||||
Sbjct: 742 cagatggttaacgcaacactcatgaacattgctgat-aacccaaccaacgtccagctccc 800

                                                                       
Query: 501 tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 560
            || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 801 aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 860

                                                                       
Query: 561 ctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctc 620
           ||| || || ||||||||||| ||||||||||| ||||| |||||||||||||||||| |
Sbjct: 861 ctccaccctatacgctcctctcatccgtgatggacgtat-ggagaagttctactgggccc 919

                              
Query: 621 ccacccgtgacgaccgtat 639
           | |||||||| ||||||||
Sbjct: 920 cgacccgtgaagaccgtat 938

---

>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1693

 Score =  466 bits (235), Expect = e-128
 Identities = 525/619 (84%), Gaps = 2/619 (0%)
 Strand = Plus / Plus

                                                                        
Query: 21   gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 80
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 399  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 458

                                                                        
Query: 81   atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 140
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 459  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 518

                                                                        
Query: 141  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 200
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 519  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 578

                                                                        
Query: 201  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 260
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 579  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 638

                                                                        
Query: 261  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 320
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 639  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 698

                                                                        
Query: 321  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 380
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 699  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 758

                                                                        
Query: 381  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 440
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||||
Sbjct: 759  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaac 818

                                                                        
Query: 441  cagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccc 500
            |||||||| ||||| || || |||||||| || |||   |||| ||||||| ||||| ||
Sbjct: 819  cagatggttaacgcaacactcatgaacattgctgat-aacccaaccaacgtccagcttcc 877

                                                                        
Query: 501  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 560
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 878  aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 937

                                                                        
Query: 561  ctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctc 620
            ||| || || ||||||||||| ||||||||||| ||||| |||||||||||||||||| |
Sbjct: 938  ctccaccctatacgctcctctcatccgtgatggacgtat-ggagaagttctactgggccc 996

                               
Query: 621  ccacccgtgacgaccgtat 639
            | |||||||| ||||||||
Sbjct: 997  cgacccgtgaagaccgtat 1015

---

>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence
          Length = 1787

 Score =  466 bits (235), Expect = e-128
 Identities = 525/619 (84%), Gaps = 2/619 (0%)
 Strand = Plus / Plus

                                                                        
Query: 21   gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 80
            ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 525  gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 584

                                                                        
Query: 81   atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 140
            ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 585  atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 644

                                                                        
Query: 141  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 200
            |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 645  aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 704

                                                                        
Query: 201  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 260
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 705  ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 764

                                                                        
Query: 261  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 320
            ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 765  atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 824

                                                                        
Query: 321  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 380
            ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 825  cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 884

                                                                        
Query: 381  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 440
            |||||||||||||||||||||||| | ||||| || || || |||||||| |||||||| 
Sbjct: 885  aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaat 944

                                                                        
Query: 441  cagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccc 500
            |||||||| ||||| || || |||||||| || |||   |||| ||||||| ||||||||
Sbjct: 945  cagatggttaacgcaacactcatgaacattgctgat-aacccaaccaacgtccagctccc 1003

                                                                        
Query: 501  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 560
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 1004 aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 1063

                                                                        
Query: 561  ctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctc 620
            ||| || || ||||||||||| ||||||||||| ||||| |||||||||||||||||| |
Sbjct: 1064 ctccaccctatacgctcctctcatccgtgatggacgtat-ggagaagttctactgggccc 1122

                               
Query: 621  ccacccgtgacgaccgtat 639
            | |||||||| ||||||||
Sbjct: 1123 cgacccgtgaagaccgtat 1141

---

>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  458 bits (231), Expect = e-125
 Identities = 532/633 (84%), Gaps = 2/633 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   acggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaagt 63
           ||||||||||||  ||||| |||||||||||||| ||| ||||||||||||    |   |
Sbjct: 313 acggcacccacgtcgccgtgctcagctcctacgactacatcagccagggccaaaagtctt 372

                                                                       
Query: 64  acgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttg 123
           || ||||||||||||  ||||  ||||||||||| ||    |  |||||||||||||| |
Sbjct: 373 acaacttcgacaacatgatggatggcttctacatagccaagggcttcatggacaagctcg 432

                                                                       
Query: 124 ttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgg 183
           | ||||| |||||||| ||||||||||||||||| ||||||||| | || |||||| |||
Sbjct: 433 tcgtccacctctccaagaacttcatgaccctgccaaacatcaaggttcccctcatcctgg 492

                                                                       
Query: 184 gtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaaga 243
           |||||  ||||||||| || || |||||||| ||||| || ||||| || ||||||||||
Sbjct: 493 gtatcgtgggaggcaaaggccagggaaaatcgttccaatgcgagctggtcttcgccaaga 552

                                                                       
Query: 244 tgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagc 303
           |||||||||     ||||||||||| ||||| ||||||||||| || ||||| |||||||
Sbjct: 553 tgggcatcannnnnatcatgatgagcgccggcgagctggagagcggcaacgccggagagc 612

                                                                       
Query: 304 cagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaaga 363
           | |||||||||||||||||||| |||||||||||  | ||| | ||||||||||| ||||
Sbjct: 613 ccgccaagctcatcaggcagcgctaccgtgaggcctccgacctcatcaagaagggcaaga 672

                                                                       
Query: 364 tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 423
           ||||||||||||||||||||||  | ||||| || |||||| | |||||||| ||||| |
Sbjct: 673 tgtgctgcctcttcatcaacgacttggacgccggcgcgggtcgcatgggcggcaccaccc 732

                                                                       
Query: 424 agtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccca 483
           ||||||| || |||||||||||||| ||||||||||||||||||||||||||   |||||
Sbjct: 733 agtacacggtgaacaaccagatggtcaacgccaccctgatgaacatcgccgacaacccca 792

                                                                       
Query: 484 cccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 543
            |||||||||||||||| || ||||||||||||||||| ||     | ||||||||| ||
Sbjct: 793 -ccaacgtgcagctcccggggatgtacaacaaggaggacaannnnngcgtgcccatcatc 851

                                                                       
Query: 544 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggga 603
           |||||||| ||||| ||||| ||||||||||| || || ||||| || || || || |||
Sbjct: 852 gtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcat-gga 910

                                            
Query: 604 gaagttctactgggctcccacccgtgacgaccg 636
           ||||||||||||||| |||||||| || |||||
Sbjct: 911 gaagttctactgggcgcccacccgcgaggaccg 943

---

>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 2 mRNA, partial cds
          Length = 1462

 Score =  444 bits (224), Expect = e-121
 Identities = 484/568 (85%), Gaps = 2/568 (0%)
 Strand = Plus / Plus

                                                                       
Query: 72  gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccat 131
           ||||||| |||||  || ||||||||||||||||| |||||||||||||||||||| || 
Sbjct: 257 gacaacaacatggatggtttctacatcgctcctgcattcatggacaagcttgttgttcac 316

                                                                       
Query: 132 ctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgg 191
            ||  ||| ||||||||| |||| || ||||| ||| | || || ||| ||||||| |||
Sbjct: 317 atcagcaagaacttcatgtccctccctaacattaaggttcctctaatcctgggtatttgg 376

                                                                       
Query: 192 ggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatc 251
           |||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| |||
Sbjct: 377 ggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgccaagatgggtatc 436

                                                                       
Query: 252 aaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaag 311
           |||||||||||||||||||||||||| ||||| ||||| ||||| || || |||||||||
Sbjct: 437 aaccccatcatgatgagtgccggagaactggaaagtggaaacgccggtgaaccagccaag 496

                                                                       
Query: 312 ctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc 371
            | ||||||||  |||||||||| || || ||||| ||||| ||||| || ||||||  |
Sbjct: 497 ttgatcaggcaaaggtaccgtgaagccgccgacataatcaaaaagggcaaaatgtgcgcc 556

                                                                       
Query: 372 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 431
            | ||||| || ||||| || |||||||| ||| | ||||| |||||||| || ||||||
Sbjct: 557 ttgttcattaatgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacacc 616

                                                                       
Query: 432 gtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgt 491
           ||||||||||||||||| ||||| ||||| |||||||||||||||  ||||| |||||||
Sbjct: 617 gtcaacaaccagatggttaacgctaccctcatgaacatcgccgataacccca-ccaacgt 675

                                                                       
Query: 492 gcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccgg 551
            |||||||| || |||||||||||||| |||||||||||||| |||||| ||||||| ||
Sbjct: 676 ccagctccccggtatgtacaacaaggaagagaacccccgtgtccccatcatcgtcactgg 735

                                                                       
Query: 552 taacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttct 611
           |||||||||||| || || || |||||||| |||||||| |||||||| |||||| || |
Sbjct: 736 taacgatttctccacactgtatgctcctctcatccgtgacggtcgtat-ggagaaatttt 794

                                       
Query: 612 actgggctcccacccgtgacgaccgtat 639
           ||||||| || ||  | |||||||||||
Sbjct: 795 actgggcaccaactagggacgaccgtat 822

---

>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score =  442 bits (223), Expect = e-121
 Identities = 492/579 (84%), Gaps = 2/579 (0%)
 Strand = Plus / Plus

                                                                        
Query: 61   agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 120
            ||||| |||| ||||||| |||||  || |||||||| || || || |||||||||||||
Sbjct: 431  agtacaacttggacaacaacatggacggtttctacatagcaccagccttcatggacaagc 490

                                                                        
Query: 121  ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 180
            |||| |||||  || |||| |||||| |||  || || ||||||||||| || || ||||
Sbjct: 491  ttgtcgtccacatcaccaagaacttcttgagtctccctaacatcaagattcctctgatct 550

                                                                        
Query: 181  tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 240
            ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| || ||||
Sbjct: 551  tgggtatctggggaggcaaaggtcaaggaaaatctttccaatgtgaacttgtttttgcca 610

                                                                        
Query: 241  agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 300
            ||||||| ||||||||||||||||||||||| ||||||||||| ||||| || || ||||
Sbjct: 611  agatgggaatcaaccccatcatgatgagtgctggagagctggaaagtggaaatgcaggag 670

                                                                        
Query: 301  agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 360
            | || |||||||| ||||||||  |||||||||| ||||| ||||| |||||||||||||
Sbjct: 671  aacctgccaagctgatcaggcaaaggtaccgtgaagctgctgacattatcaagaagggta 730

                                                                        
Query: 361  agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 420
            | ||||||||||| |||||||||||||| |||||||| || ||| | ||||| ||||| |
Sbjct: 731  aaatgtgctgcctgttcatcaacgatctcgacgctggagctggtcgtatgggtggaacaa 790

                                                                        
Query: 421  cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 480
            | || ||||| || ||||||||||||||||| |||||||| |||||||| || ||    |
Sbjct: 791  ctcaatacactgttaacaaccagatggtgaatgccaccctcatgaacattgctga-caac 849

                                                                        
Query: 481  ccacccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 540
            ||| | || || ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 850  ccaacaaatgtccagctccctggtatgtacaacaaggaagagaaccctcgtgtgcctatc 909

                                                                        
Query: 541  gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 600
             | ||||| |||||||| ||||||||  | ||||||||||| ||||||||||||||||| 
Sbjct: 910  attgtcactggtaacgacttctcgacattgtacgctcctcttatccgtgatggtcgtat- 968

                                                   
Query: 601  ggagaagttctactgggctcccacccgtgacgaccgtat 639
            ||| || |||||||||||||| ||| | || ||||||||
Sbjct: 969  ggaaaaattctactgggctcctaccagggaagaccgtat 1007

---

>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  420 bits (212), Expect = e-114
 Identities = 343/384 (89%), Gaps = 2/384 (0%)
 Strand = Plus / Minus

                                                                          
Query: 254    ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
              ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || |||||
Sbjct: 109158 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 109099

                                                                          
Query: 314    catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
               ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 109098 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 109039

                                                                          
Query: 374    cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
              ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| ||
Sbjct: 109038 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggt 108979

                                                                          
Query: 434    caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
               |||||||||||||||||||||||||||||||||||||||||    |||| |||||||||
Sbjct: 108978 gaacaaccagatggtgaacgccaccctgatgaacatcgccga-caacccaaccaacgtgc 108920

                                                                          
Query: 494    agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
              ||||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| |
Sbjct: 108919 agctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggca 108860

                                                                          
Query: 554    acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
              |||| ||||| ||||| ||||| || || |||||||| || ||||| |||||||||||||
Sbjct: 108859 acgacttctccacgctgtacgcgccgctcatccgtgacgggcgtat-ggagaagttctac 108801

                                      
Query: 614    tgggctcccacccgtgacgaccgt 637
              |||||||||||||| |||||||||
Sbjct: 108800 tgggctcccacccgcgacgaccgt 108777



 Score =  270 bits (136), Expect = 5e-69
 Identities = 178/192 (92%)
 Strand = Plus / Minus

                                                                          
Query: 62     gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 121
              ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 109435 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 109376

                                                                          
Query: 122    tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 181
               || |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 109375 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 109316

                                                                          
Query: 182    gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 241
              |||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 109315 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 109256

                          
Query: 242    gatgggcatcaa 253
              |||||| |||||
Sbjct: 109255 gatggggatcaa 109244



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 91/104 (87%), Gaps = 1/104 (0%)
 Strand = Plus / Minus

                                                                          
Query: 410    gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 469
              |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 112679 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 112620

                                                          
Query: 470    cgccgatgcccccacccaacgtgcagctccctggcatgtacaac 513
              ||| ||   ||||| |||||||||||||||| || |||||||||
Sbjct: 112619 cgcggacaacccca-ccaacgtgcagctcccagggatgtacaac 112577



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 46/47 (97%)
 Strand = Plus / Minus

                                                             
Query: 6      ggcacccacgaggccgtcctcagctcctacgagtacgtcagccaggg 52
              |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 109604 ggcacccacgaggccgtcctcagctcctacgagtacctcagccaggg 109558



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                          
Query: 297    ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 356
              |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 112778 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 112719

                                                    
Query: 357    ggtaagatgtgctgcctcttcatcaacgatcttgacgc 394
              || |||||||||   || ||||||||||| || |||||
Sbjct: 112718 gggaagatgtgcgtgctgttcatcaacgacctggacgc 112681



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 605    aagttctactgggctcccacccgtgacgaccg 636
              ||||||||||||||||||||||| || |||||
Sbjct: 112513 aagttctactgggctcccacccgcgaggaccg 112482



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 216    ttccagtgtgagcttgtgttcgccaagatgggcatcaa 253
              ||||||||||| || || |||||||||||||| |||||
Sbjct: 112906 ttccagtgtgatctcgtcttcgccaagatggggatcaa 112869

---

>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  420 bits (212), Expect = e-114
 Identities = 343/384 (89%), Gaps = 2/384 (0%)
 Strand = Plus / Minus

                                                                         
Query: 254   ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
             ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || |||||
Sbjct: 31035 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 30976

                                                                         
Query: 314   catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
              ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 30975 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 30916

                                                                         
Query: 374   cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
             ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| ||
Sbjct: 30915 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggt 30856

                                                                         
Query: 434   caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
              |||||||||||||||||||||||||||||||||||||||||    |||| |||||||||
Sbjct: 30855 gaacaaccagatggtgaacgccaccctgatgaacatcgccga-caacccaaccaacgtgc 30797

                                                                         
Query: 494   agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
             ||||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| |
Sbjct: 30796 agctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggca 30737

                                                                         
Query: 554   acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
             |||| ||||| ||||| ||||| || || |||||||| || ||||| |||||||||||||
Sbjct: 30736 acgacttctccacgctgtacgcgccgctcatccgtgacgggcgtat-ggagaagttctac 30678

                                     
Query: 614   tgggctcccacccgtgacgaccgt 637
             |||||||||||||| |||||||||
Sbjct: 30677 tgggctcccacccgcgacgaccgt 30654



 Score =  270 bits (136), Expect = 5e-69
 Identities = 178/192 (92%)
 Strand = Plus / Minus

                                                                         
Query: 62    gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 121
             ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 31312 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 31253

                                                                         
Query: 122   tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 181
              || |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 31252 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 31193

                                                                         
Query: 182   gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 241
             |||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 31192 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 31133

                         
Query: 242   gatgggcatcaa 253
             |||||| |||||
Sbjct: 31132 gatggggatcaa 31121



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 91/104 (87%), Gaps = 1/104 (0%)
 Strand = Plus / Minus

                                                                         
Query: 410   gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 469
             |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 34556 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 34497

                                                         
Query: 470   cgccgatgcccccacccaacgtgcagctccctggcatgtacaac 513
             ||| ||   ||||| |||||||||||||||| || |||||||||
Sbjct: 34496 cgcggacaacccca-ccaacgtgcagctcccagggatgtacaac 34454



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 46/47 (97%)
 Strand = Plus / Minus

                                                            
Query: 6     ggcacccacgaggccgtcctcagctcctacgagtacgtcagccaggg 52
             |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 31481 ggcacccacgaggccgtcctcagctcctacgagtacctcagccaggg 31435



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                         
Query: 297   ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 356
             |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 34655 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 34596

                                                   
Query: 357   ggtaagatgtgctgcctcttcatcaacgatcttgacgc 394
             || |||||||||   || ||||||||||| || |||||
Sbjct: 34595 gggaagatgtgcgtgctgttcatcaacgacctggacgc 34558



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 605   aagttctactgggctcccacccgtgacgaccg 636
             ||||||||||||||||||||||| || |||||
Sbjct: 34390 aagttctactgggctcccacccgcgaggaccg 34359



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 216   ttccagtgtgagcttgtgttcgccaagatgggcatcaa 253
             ||||||||||| || || |||||||||||||| |||||
Sbjct: 34783 ttccagtgtgatctcgtcttcgccaagatggggatcaa 34746

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  420 bits (212), Expect = e-114
 Identities = 343/384 (89%), Gaps = 2/384 (0%)
 Strand = Plus / Minus

                                                                            
Query: 254      ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
                ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || |||||
Sbjct: 28304297 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 28304238

                                                                            
Query: 314      catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
                 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 28304237 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 28304178

                                                                            
Query: 374      cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
                ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| ||
Sbjct: 28304177 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggt 28304118

                                                                            
Query: 434      caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
                 |||||||||||||||||||||||||||||||||||||||||    |||| |||||||||
Sbjct: 28304117 gaacaaccagatggtgaacgccaccctgatgaacatcgccga-caacccaaccaacgtgc 28304059

                                                                            
Query: 494      agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
                ||||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| |
Sbjct: 28304058 agctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggca 28303999

                                                                            
Query: 554      acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
                |||| ||||| ||||| ||||| || || |||||||| || ||||| |||||||||||||
Sbjct: 28303998 acgacttctccacgctgtacgcgccgctcatccgtgacgggcgtat-ggagaagttctac 28303940

                                        
Query: 614      tgggctcccacccgtgacgaccgt 637
                |||||||||||||| |||||||||
Sbjct: 28303939 tgggctcccacccgcgacgaccgt 28303916



 Score =  270 bits (136), Expect = 5e-69
 Identities = 178/192 (92%)
 Strand = Plus / Minus

                                                                            
Query: 62       gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 121
                ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 28304574 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 28304515

                                                                            
Query: 122      tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 181
                 || |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 28304514 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 28304455

                                                                            
Query: 182      gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 241
                |||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 28304454 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 28304395

                            
Query: 242      gatgggcatcaa 253
                |||||| |||||
Sbjct: 28304394 gatggggatcaa 28304383



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 91/104 (87%), Gaps = 1/104 (0%)
 Strand = Plus / Minus

                                                                            
Query: 410      gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 469
                |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 28307818 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 28307759

                                                            
Query: 470      cgccgatgcccccacccaacgtgcagctccctggcatgtacaac 513
                ||| ||   ||||| |||||||||||||||| || |||||||||
Sbjct: 28307758 cgcggacaacccca-ccaacgtgcagctcccagggatgtacaac 28307716



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 46/47 (97%)
 Strand = Plus / Minus

                                                               
Query: 6        ggcacccacgaggccgtcctcagctcctacgagtacgtcagccaggg 52
                |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 28304743 ggcacccacgaggccgtcctcagctcctacgagtacctcagccaggg 28304697



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                            
Query: 297      ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 356
                |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 28307917 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 28307858

                                                      
Query: 357      ggtaagatgtgctgcctcttcatcaacgatcttgacgc 394
                || |||||||||   || ||||||||||| || |||||
Sbjct: 28307857 gggaagatgtgcgtgctgttcatcaacgacctggacgc 28307820



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 605      aagttctactgggctcccacccgtgacgaccg 636
                ||||||||||||||||||||||| || |||||
Sbjct: 28307652 aagttctactgggctcccacccgcgaggaccg 28307621



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 216      ttccagtgtgagcttgtgttcgccaagatgggcatcaa 253
                ||||||||||| || || |||||||||||||| |||||
Sbjct: 28308045 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28308008

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  420 bits (212), Expect = e-114
 Identities = 343/384 (89%), Gaps = 2/384 (0%)
 Strand = Plus / Minus

                                                                            
Query: 254      ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
                ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || |||||
Sbjct: 28286746 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 28286687

                                                                            
Query: 314      catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
                 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 28286686 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 28286627

                                                                            
Query: 374      cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
                ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| ||
Sbjct: 28286626 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggt 28286567

                                                                            
Query: 434      caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
                 |||||||||||||||||||||||||||||||||||||||||    |||| |||||||||
Sbjct: 28286566 gaacaaccagatggtgaacgccaccctgatgaacatcgccga-caacccaaccaacgtgc 28286508

                                                                            
Query: 494      agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
                ||||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| |
Sbjct: 28286507 agctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggca 28286448

                                                                            
Query: 554      acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
                |||| ||||| ||||| ||||| || || |||||||| || ||||| |||||||||||||
Sbjct: 28286447 acgacttctccacgctgtacgcgccgctcatccgtgacgggcgtat-ggagaagttctac 28286389

                                        
Query: 614      tgggctcccacccgtgacgaccgt 637
                |||||||||||||| |||||||||
Sbjct: 28286388 tgggctcccacccgcgacgaccgt 28286365



 Score =  270 bits (136), Expect = 5e-69
 Identities = 178/192 (92%)
 Strand = Plus / Minus

                                                                            
Query: 62       gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 121
                ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 28287023 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 28286964

                                                                            
Query: 122      tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 181
                 || |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 28286963 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 28286904

                                                                            
Query: 182      gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 241
                |||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 28286903 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 28286844

                            
Query: 242      gatgggcatcaa 253
                |||||| |||||
Sbjct: 28286843 gatggggatcaa 28286832



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 91/104 (87%), Gaps = 1/104 (0%)
 Strand = Plus / Minus

                                                                            
Query: 410      gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 469
                |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 28290267 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 28290208

                                                            
Query: 470      cgccgatgcccccacccaacgtgcagctccctggcatgtacaac 513
                ||| ||   ||||| |||||||||||||||| || |||||||||
Sbjct: 28290207 cgcggacaacccca-ccaacgtgcagctcccagggatgtacaac 28290165



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 46/47 (97%)
 Strand = Plus / Minus

                                                               
Query: 6        ggcacccacgaggccgtcctcagctcctacgagtacgtcagccaggg 52
                |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 28287192 ggcacccacgaggccgtcctcagctcctacgagtacctcagccaggg 28287146



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                            
Query: 297      ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 356
                |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 28290366 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 28290307

                                                      
Query: 357      ggtaagatgtgctgcctcttcatcaacgatcttgacgc 394
                || |||||||||   || ||||||||||| || |||||
Sbjct: 28290306 gggaagatgtgcgtgctgttcatcaacgacctggacgc 28290269



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 605      aagttctactgggctcccacccgtgacgaccg 636
                ||||||||||||||||||||||| || |||||
Sbjct: 28290101 aagttctactgggctcccacccgcgaggaccg 28290070



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 216      ttccagtgtgagcttgtgttcgccaagatgggcatcaa 253
                ||||||||||| || || |||||||||||||| |||||
Sbjct: 28290494 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28290457

---

>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds
          Length = 1809

 Score =  396 bits (200), Expect = e-107
 Identities = 468/552 (84%), Gaps = 4/552 (0%)
 Strand = Plus / Plus

                                                                        
Query: 89   cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 148
            ||||||||| || ||| |||||||||||||| ||||||| ||  || |||| |||| | |
Sbjct: 514  cttctacattgccccttctttcatggacaagattgttgttcacatcaccaagaactactt 573

                                                                        
Query: 149  gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 208
            || | |||| ||||||||| | || || ||||||||||| ||||||||||| ||||||||
Sbjct: 574  gaacttgcctaacatcaaggttcccctgatcttgggtatttggggaggcaaaggtcaagg 633

                                                                        
Query: 209  aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 268
             ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 634  taaatccttccaatgtgagcttgtgttcgccaagatgggaatcaaccccatcatgatgag 693

                                                                        
Query: 269  tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 328
            ||| |||||  |||| ||||| ||||| ||||||||||| ||| | ||||||||  ||||
Sbjct: 694  tgcgggagaattggaaagtggaaacgcaggagagccagcaaagttgatcaggcaaaggta 753

                                                                        
Query: 329  ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatc 387
            ||||||||| |||||||| ||    ||||| |||||||| ||| || |||||||||||||
Sbjct: 754  ccgtgaggcagcagacataattgccaagggaaagatgtg-tgctctgttcatcaacgatc 812

                                                                        
Query: 388  ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatgg 447
            | ||||| ||||| ||  | ||||| || ||||| || |||||||| |||||||||||||
Sbjct: 813  tcgacgcgggtgctggacgtatgggaggcaccacacaatacaccgtgaacaaccagatgg 872

                                                                        
Query: 448  tgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccctggcatg 507
            | ||||||||||| |||||||| || ||   ||||| |||| || || |||||||| |||
Sbjct: 873  ttaacgccaccctcatgaacattgctgacaacccca-ccaatgtccaactccctggtatg 931

                                                                        
Query: 508  tacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacg 567
            ||||||||| | |||||| ||||||| |||||  ||||||| |||||||| ||||| || 
Sbjct: 932  tacaacaagcaagagaacgcccgtgttcccattatcgtcactggtaacgacttctccacc 991

                                                                        
Query: 568  ctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctcccacccg 627
             | |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 992  ttgtacgctccccttatccgtgatggtcgtat-ggagaagttctactgggctcccacccg 1050

                        
Query: 628  tgacgaccgtat 639
            ||| ||||||||
Sbjct: 1051 tgaggaccgtat 1062

---

>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score =  377 bits (190), Expect = e-101
 Identities = 449/530 (84%), Gaps = 4/530 (0%)
 Strand = Plus / Plus

                                                                        
Query: 99   gctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgccc 158
            ||||| ||||| ||||||||||||||||| ||  || |||| |||||||||||||| || 
Sbjct: 485  gctcccgcttttatggacaagcttgttgttcacatcaccaagaacttcatgacccttcct 544

                                                                        
Query: 159  aacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattc 218
            ||||| ||| | || |||||||||||||| ||||||||||| ||||| || || || |||
Sbjct: 545  aacatgaaggttcctctcatcttgggtatttggggaggcaaaggtcagggcaagtctttc 604

                                                                        
Query: 219  cagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagag 278
            ||||| |||||||| || ||||||||| | |||| ||| |||||||||||||||||||| 
Sbjct: 605  cagtgcgagcttgtctttgccaagatgagaatcagccctatcatgatgagtgccggagaa 664

                                                                        
Query: 279  ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 338
             |||| ||||| ||||| ||||| || || ||||| ||||||||  |||||||||| || 
Sbjct: 665  ttggaaagtggaaacgcaggagaacccgcgaagctgatcaggcaaaggtaccgtgaagca 724

                                                                        
Query: 339  gcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatcttgacgctgg 397
            || ||||| |||| ||||||||| ||||| ||| |||||||||||||||||||| || ||
Sbjct: 725  gccgacattatcaggaagggtaaaatgtg-tgcactcttcatcaacgatcttgatgcagg 783

                                                                        
Query: 398  tgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccac 457
             || ||| || | || |||||||| || ||||| ||||||||||| |||||||| |||||
Sbjct: 784  agctggtcggcttggtggaaccacccaatacactgtcaacaaccaaatggtgaatgccac 843

                                                                        
Query: 458  cctgatgaacatcgccgatgcccccacccaacgtgcagctccctggcatgtacaacaagg 517
            ||| |||||||| || |||  ||| | | ||||| ||||| || || |||||||||||||
Sbjct: 844  cctcatgaacattgctgataacccga-caaacgtccagcttccaggtatgtacaacaagg 902

                                                                        
Query: 518  aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 577
            |||||||||||||||| || ||| | |||||||||||||||||||| ||  | |||||||
Sbjct: 903  aggagaacccccgtgtcccaatcattgtcaccggtaacgatttctcaacattgtacgctc 962

                                                              
Query: 578  ctctgatccgtgatggtcgtatgggagaagttctactgggctcccacccg 627
            |||| |||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 963  ctctcatccgtgacggtcgtat-ggagaagttctactgggctcccacccg 1011

---

>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear
           gene for chloroplast product
          Length = 1671

 Score =  369 bits (186), Expect = 8e-99
 Identities = 448/530 (84%), Gaps = 4/530 (0%)
 Strand = Plus / Plus

                                                                       
Query: 90  ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 149
           |||||||| |||||||||||  |||||||||||||||| ||  || |||| |||||||||
Sbjct: 469 ttctacattgctcctgcttttctggacaagcttgttgttcacatcaccaagaacttcatg 528

                                                                       
Query: 150 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 209
           ||| |||||||||||||| | || |||||  | |||||||||||||||||||| ||||||
Sbjct: 529 accttgcccaacatcaaggttcctctcattcttggtatctggggaggcaagggacaagga 588

                                                                       
Query: 210 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 269
           || || ||||| ||||||||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 589 aagtctttccaatgtgagcttgtctttgccaagatgggaatcaaccccatcatgatgagt 648

                                                                       
Query: 270 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 329
           || |||||| |||| ||||| || || ||||||||||| ||  | ||||||||| | |||
Sbjct: 649 gctggagagttggaaagtggaaatgccggagagccagcaaaattgatcaggcagagatac 708

                                                                       
Query: 330 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatct 388
           ||||| ||||||||  |||||   ||||| |||||||| ||| || ||||||||||||||
Sbjct: 709 cgtgaagctgcagatttgatcgccaagggaaagatgtg-tgctctattcatcaacgatct 767

                                                                       
Query: 389 tgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggt 448
           ||| || || || ||| |  | || |||||||| || ||||| || ||||||||||||||
Sbjct: 768 tgatgcaggagcaggtcgtcttggtggaaccacccaatacactgtgaacaaccagatggt 827

                                                                       
Query: 449 gaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccctggcatgt 508
           ||| ||||| || |||||||| || |||  ||| | | || |||||||| ||||| ||||
Sbjct: 828 gaatgccactctcatgaacattgctgataacccta-caaatgtgcagcttcctggtatgt 886

                                                                       
Query: 509 acaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgc 568
           |||||||||| |||||| |||||||||||||| | ||||||||||| |||||||| ||||
Sbjct: 887 acaacaaggaagagaacgcccgtgtgcccatcattgtcaccggtaatgatttctcaacgc 946

                                                             
Query: 569 tctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggc 618
           | || |||||||| || |||||||| ||||| ||||||||||||||||||
Sbjct: 947 tgtatgctcctctcattcgtgatgggcgtat-ggagaagttctactgggc 995

---

>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds
          Length = 1832

 Score =  369 bits (186), Expect = 8e-99
 Identities = 463/550 (84%), Gaps = 4/550 (0%)
 Strand = Plus / Plus

                                                                        
Query: 91   tctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatga 150
            ||||||| || ||||| || ||||||||||||||||| ||  || |||| |||||| |||
Sbjct: 630  tctacattgcccctgcctttatggacaagcttgttgttcacatcaccaagaacttcttga 689

                                                                        
Query: 151  ccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaa 210
             | |||||||||||||||| ||||||||||||||| | |||||||||||||||||||| |
Sbjct: 690  acttgcccaacatcaagataccactcatcttgggtgtttggggaggcaagggtcaaggta 749

                                                                        
Query: 211  aatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtg 270
            |||| ||||| ||||||||||||||||||||| | || || |||||||||||||||||||
Sbjct: 750  aatccttccaatgtgagcttgtgttcgccaagttaggaataaaccccatcatgatgagtg 809

                                                                        
Query: 271  ccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtacc 330
            |||||||  |||| ||||| || || ||||||||||| ||| | ||||||||  ||||||
Sbjct: 810  ccggagaattggaaagtggaaatgcaggagagccagctaagttgatcaggcaaaggtacc 869

                                                                        
Query: 331  gtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatctt 389
            ||||||| |||||| ||||    |||||||||||||| ||| || |||||||||||||| 
Sbjct: 870  gtgaggcagcagacttgattgctaagggtaagatgtg-tgctctattcatcaacgatctg 928

                                                                        
Query: 390  gacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtg 449
            ||  | ||||| ||  | ||||| || ||||| || |||||||| |||||||||||||| 
Sbjct: 929  gaacccggtgctggacgtatgggaggcaccacccaatacaccgtaaacaaccagatggtt 988

                                                                        
Query: 450  aacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccctggcatgta 509
            |||||||| ||  ||||||| || ||    |||| |||| || || |||||||| |||||
Sbjct: 989  aacgccacactcctgaacattgctga-caacccaaccaatgtccaactccctggtatgta 1047

                                                                        
Query: 510  caacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgct 569
            ||||||| |||| ||  ||||||| |||||| | || || |||||||||||||| ||  |
Sbjct: 1048 caacaagcaggacaatgcccgtgtccccatcattgttactggtaacgatttctccacctt 1107

                                                                        
Query: 570  ctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctcccacccgtg 629
             |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1108 gtacgctccccttatccgtgatggtcgtat-ggagaagttctactgggctcccacccgtg 1166

                      
Query: 630  acgaccgtat 639
            | ||||||||
Sbjct: 1167 aggaccgtat 1176

---

>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase
          Length = 1652

 Score =  367 bits (185), Expect = 3e-98
 Identities = 497/593 (83%), Gaps = 6/593 (1%)
 Strand = Plus / Plus

                                                                       
Query: 21  gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 80
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 391 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 450

                                                                       
Query: 81  atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 140
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 451 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 510

                                                                       
Query: 141 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatct-ggggaggcaa 199
           |||||| |||| ||||| ||||||||| | ||||| || |||||  ||| ||||||||||
Sbjct: 511 aacttcttgactctgcctaacatcaaggttccacttattttgggc-tctcggggaggcaa 569

                                                                       
Query: 200 gggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccat 259
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| ||
Sbjct: 570 aggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaat 629

                                                                       
Query: 260 catgatgagtgccggagagctggagagtgggaacgctggaga-gccagccaagctcatca 318
           |||||||||||| |||||||| |||||||| ||||| ||||| | | || ||||| ||| 
Sbjct: 630 catgatgagtgctggagagcttgagagtggaaacgcaggagaagtccgc-aagcttatcc 688

                                                                       
Query: 319 ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 378
           | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||
Sbjct: 689 gtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttca 748

                                                                       
Query: 379 tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 438
           |||||||||||||||||||||||||| | ||||| || || || |||||||| |||||||
Sbjct: 749 tcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaaca 808

                                                                       
Query: 439 accagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctc 498
           |||||||||| ||||| || || |||||||| || |||   |||| ||||||| ||||||
Sbjct: 809 accagatggttaacgcaacactcatgaacattgctgat-aacccaaccaacgtccagctc 867

                                                                       
Query: 499 cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 558
           || || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||
Sbjct: 868 ccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgat 927

                                                                
Query: 559 ttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttct 611
           ||||| ||  | |||| |||||| |||| |||||| ||||| |||||||||||
Sbjct: 928 ttctccaccttatacggtcctctcatccttgatggacgtat-ggagaagttct 979

---

>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds
          Length = 1627

 Score =  361 bits (182), Expect = 2e-96
 Identities = 466/558 (83%), Gaps = 2/558 (0%)
 Strand = Plus / Plus

                                                                       
Query: 61  agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 120
           ||||| |||| ||||||| || ||  || |||||||| ||||| |||||  |||||||||
Sbjct: 436 agtacaactttgacaacatcaaggatggtttctacattgctccagcttttttggacaagc 495

                                                                       
Query: 121 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 180
           ||||||| ||  || |||| |||||||||||| |||||||||||||| | || |||||  
Sbjct: 496 ttgttgttcacatcgccaagaacttcatgaccttgcccaacatcaaggttcctctcattc 555

                                                                       
Query: 181 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 240
           | ||| |||||||||||||||| ||||||||||| ||||| ||||||||||| || ||||
Sbjct: 556 ttggtgtctggggaggcaagggacaaggaaaatctttccaatgtgagcttgtctttgcca 615

                                                                       
Query: 241 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 300
           ||||||| ||||||||||||||||||||||| |||||| |||| ||||| || || ||||
Sbjct: 616 agatgggaatcaaccccatcatgatgagtgctggagagttggaaagtggaaatgccggag 675

                                                                       
Query: 301 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 360
           ||||||| ||  | || |||||| | |||||||| ||  ||||| | ||||||||||| |
Sbjct: 676 agccagcaaaattgattaggcagagataccgtgaagcctcagacttaatcaagaagggaa 735

                                                                       
Query: 361 agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 420
           |||||||    || |||||||| |||||||| || || || ||| |  | || |||||||
Sbjct: 736 agatgtgtgttctgttcatcaatgatcttgatgcaggagcaggtcgtcttggtggaacca 795

                                                                       
Query: 421 cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 480
           | || ||||| || ||||||||||||||||| ||||| || |||||||| || |||  ||
Sbjct: 796 cccaatacactgtgaacaaccagatggtgaatgccactctcatgaacattgctgataacc 855

                                                                       
Query: 481 ccacccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 540
           ||| | || |||||||| ||||| |||||||||||||| || ||| ||||||||||||||
Sbjct: 856 cca-caaatgtgcagcttcctggtatgtacaacaaggaagataacgcccgtgtgcccatc 914

                                                                       
Query: 541 gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 600
            | ||||| |||||||||||||| || || || |||||||| ||||||||||||||||| 
Sbjct: 915 attgtcactggtaacgatttctcaacactttatgctcctctcatccgtgatggtcgtat- 973

                             
Query: 601 ggagaagttctactgggc 618
           ||||||||||||||||||
Sbjct: 974 ggagaagttctactgggc 991

---

>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds
          Length = 1634

 Score =  357 bits (180), Expect = 3e-95
 Identities = 449/536 (83%), Gaps = 2/536 (0%)
 Strand = Plus / Plus

                                                                        
Query: 90   ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 149
            |||||||| ||||| |||||||||||||||||||| || ||  || ||||||||||||||
Sbjct: 476  ttctacatagctccagctttcatggacaagcttgtcgttcacatcaccaaaaacttcatg 535

                                                                        
Query: 150  accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 209
            || || |||||||| ||| | || ||||| ||||||||||||||||| || |||||||| 
Sbjct: 536  actctccccaacataaaggttcctctcattttgggtatctggggaggtaaaggtcaaggt 595

                                                                        
Query: 210  aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 269
            ||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 596  aaatctttccagtgtgagcttgtctttgccaagatgggaatcaaccccatcatgatgagt 655

                                                                        
Query: 270  gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 329
            ||||||||  ||||||| || ||||| |||||||| || ||| | |||||||| ||||  
Sbjct: 656  gccggagaattggagagcggcaacgcaggagagcccgcgaagttgatcaggcaacggtgt 715

                                                                        
Query: 330  cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 389
            |||||||| || ||||| ||||||||||| |||||||  ||||| || ||||| ||||||
Sbjct: 716  cgtgaggcggccgacatcatcaagaagggaaagatgtcttgcctatttatcaatgatctt 775

                                                                        
Query: 390  gacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtg 449
            || || ||||| |||||| | || || || || || ||||| || |||||||| ||||||
Sbjct: 776  gatgcaggtgccggtaggcttggtgggacaactcaatacactgtgaacaaccaaatggtg 835

                                                                        
Query: 450  aacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccctggcatgta 509
            || || ||||| |||||||| || ||     ||| |||| || |||||||| || |||||
Sbjct: 836  aatgctaccctcatgaacattgctga-caatccaaccaatgttcagctcccgggtatgta 894

                                                                        
Query: 510  caacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgct 569
            ||||||||| ||||| || ||||| || ||| ||||||| ||||| || ||||||||  |
Sbjct: 895  caacaaggaagagaatccacgtgtaccgatcatcgtcacaggtaatgacttctcgacatt 954

                                                                    
Query: 570  ctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctcccacc 625
             ||||||||||| || |||||||||||||| |||||| ||||||||||| ||||||
Sbjct: 955  gtacgctcctctcattcgtgatggtcgtat-ggagaaattctactgggcgcccacc 1009

---

>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score =  355 bits (179), Expect = 1e-94
 Identities = 481/579 (83%), Gaps = 2/579 (0%)
 Strand = Plus / Plus

                                                                        
Query: 61   agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 120
            ||||| |||| ||||||| |||||  || |||||||| || || || |||||||||||||
Sbjct: 431  agtacaacttggacaacaacatggacggtttctacatagcaccagccttcatggacaagc 490

                                                                        
Query: 121  ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 180
            |||| |||||  || |||| |||||| |||  || || ||||||||||| || || ||||
Sbjct: 491  ttgtcgtccacatcaccaagaacttcttgagtctccctaacatcaagattcctctgatct 550

                                                                        
Query: 181  tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 240
            ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| || ||||
Sbjct: 551  tgggtatctggggaggcaaaggtcaaggaaaatctttccaatgtgaacttgtttttgcca 610

                                                                        
Query: 241  agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 300
            ||||||| ||||||||||||||||||||||| ||||||||||| ||||| || || ||||
Sbjct: 611  agatgggaatcaaccccatcatgatgagtgctggagagctggaaagtggaaatgcaggag 670

                                                                        
Query: 301  agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 360
            |||| || ||||| ||||||||  |||| ||||| || || || || ||||||||||| |
Sbjct: 671  agcccgcaaagctgatcaggcaaaggtatcgtgaagcagctgatatcatcaagaagggaa 730

                                                                        
Query: 361  agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacca 420
            | ||||||||||| || ||||||||||| || || || || ||| | ||||| ||||| |
Sbjct: 731  aaatgtgctgcctgtttatcaacgatctcgatgccggagctggtcgtatgggtggaacaa 790

                                                                        
Query: 421  cgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccc 480
            | || ||||| || ||||| ||||||||||| |||||||| |||||||| || ||    |
Sbjct: 791  ctcaatacactgttaacaatcagatggtgaatgccaccctcatgaacatagctga-caac 849

                                                                        
Query: 481  ccacccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 540
            ||| | || || ||||| |||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 850  ccaacaaatgtccagcttcctggcatgtacaacaaggaagagaaccctcgtgttcccatc 909

                                                                        
Query: 541  gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 600
             | ||||| |||||||| ||||| ||  | || || ||||| ||||||||||| ||||| 
Sbjct: 910  attgtcactggtaacgacttctcaacattgtatgcccctcttatccgtgatggccgtat- 968

                                                   
Query: 601  ggagaagttctactgggctcccacccgtgacgaccgtat 639
            |||||| ||||||||||| |||||| | || ||||||||
Sbjct: 969  ggagaaattctactgggcacccaccagggaggaccgtat 1007

---

>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete
           cds
          Length = 1674

 Score =  327 bits (165), Expect = 3e-86
 Identities = 485/589 (82%), Gaps = 2/589 (0%)
 Strand = Plus / Plus

                                                                       
Query: 30  tcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggc 89
           |||||||| ||||||||||| || || ||  ||||| |||| |||||||   |||  || 
Sbjct: 396 tcctacgaatacgtcagccaaggtcttcgccagtacaacttggacaacaagttggacgga 455

                                                                       
Query: 90  ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 149
           |||||||||||||||||||||||||||||||||||||| ||  || |||| |||||| ||
Sbjct: 456 ttctacatcgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttg 515

                                                                       
Query: 150 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 209
           |   |||||||||||||| | ||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 516 aaattgcccaacatcaaggttccacttatcttgggtatctggggaggcaaaggtcaaggc 575

                                                                       
Query: 210 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 269
           ||||||||||||||||| ||||| |||   |||||||| ||||||||||| |||||||||
Sbjct: 576 aaatcattccagtgtgaacttgtcttcagaaagatgggaatcaaccccattatgatgagt 635

                                                                       
Query: 270 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 329
           || |||||  |||| ||||| || || ||||||||||||||| | || |||||  |||||
Sbjct: 636 gctggagaattggaaagtggaaatgcaggagagccagccaagttgattaggcaaaggtac 695

                                                                       
Query: 330 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 389
            | || || ||||| || ||||  ||||| || ||||| |||||||||||||||||||| 
Sbjct: 696 agagaagcagcagaaatcatcagaaagggaaatatgtgttgcctcttcatcaacgatctc 755

                                                                       
Query: 390 gacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtg 449
           || || || || ||||| ||||| ||||| || || ||||| ||||||||||| ||||||
Sbjct: 756 gatgcaggagctggtagaatgggtggaactacccaatacactgtcaacaaccaaatggtg 815

                                                                       
Query: 450 aacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccctggcatgta 509
           || ||||| || |||||||| || ||   ||| | | || || |||||||| || |||||
Sbjct: 816 aatgccactctcatgaacattgctgacaacccga-caaatgtccagctccccggtatgta 874

                                                                       
Query: 510 caacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgct 569
           ||||||| | |||||  || | || || ||  ||||||| |||||||||||||| ||  |
Sbjct: 875 caacaagcaagagaatgccagggtccctattatcgtcactggtaacgatttctccacatt 934

                                                            
Query: 570 ctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggc 618
            || ||||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 935 gtatgctccacttatccgtgatggtcgtat-ggagaagttctactgggc 982

---

>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds
          Length = 1656

 Score =  309 bits (156), Expect = 6e-81
 Identities = 440/532 (82%), Gaps = 2/532 (0%)
 Strand = Plus / Plus

                                                                       
Query: 87  ggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttc 146
           ||||||||||| || ||||||||||||||||| |||||||| ||  || |||| ||||||
Sbjct: 434 ggcttctacattgcccctgctttcatggacaaacttgttgttcacatcaccaagaacttc 493

                                                                       
Query: 147 atgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaa 206
            ||||  |||||||||||||| | ||||||||||||||| | ||||||||||| ||||||
Sbjct: 494 ttgacattgcccaacatcaaggttccactcatcttgggtgtatggggaggcaaaggtcaa 553

                                                                       
Query: 207 ggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatg 266
           || ||||||||||| ||||||||||| |||   |||||||| ||||||||||| ||||||
Sbjct: 554 ggtaaatcattccaatgtgagcttgtcttcagaaagatgggaatcaaccccattatgatg 613

                                                                       
Query: 267 agtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcgg 326
           ||||| |||||  |||| ||||| || || ||||||||||| ||  | || |||||  ||
Sbjct: 614 agtgctggagaattggaaagtggaaatgcaggagagccagctaaattgattaggcaaagg 673

                                                                       
Query: 327 taccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgat 386
           ||| | ||||| || || || |||| ||| || || ||||| || |||||||||||||||
Sbjct: 674 tacagagaggcagctgaaatcatcaggaaaggaaacatgtgttgtctcttcatcaacgat 733

                                                                       
Query: 387 cttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatg 446
           || || || || || ||||| ||||| ||||| || || |||||||||||||||||||||
Sbjct: 734 ctcgatgcaggagctggtagaatgggtggaactacccaatacaccgtcaacaaccagatg 793

                                                                       
Query: 447 gtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccctggcat 506
           ||||| |||||||| |||||||| || ||    |||| | || || |||||||| || ||
Sbjct: 794 gtgaatgccaccctcatgaacattgctga-caacccaacaaatgtccagctccccggtat 852

                                                                       
Query: 507 gtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgac 566
           |||||||||| | |||||| || | || |||||  | ||||| |||||||| ||||| ||
Sbjct: 853 gtacaacaagcaagagaacgccagggtacccattattgtcactggtaacgacttctccac 912

                                                               
Query: 567 gctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggc 618
             | || |||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 913 attgtatgctcctcttatccgtgatggtcgtat-ggagaagttctactgggc 963

---

>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score =  305 bits (154), Expect = 9e-80
 Identities = 327/382 (85%), Gaps = 2/382 (0%)
 Strand = Plus / Minus

                                                                         
Query: 258   atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 317
             |||||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| |||
Sbjct: 14555 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatc 14496

                                                                         
Query: 318   aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 377
              | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||||||
Sbjct: 14495 cgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttc 14436

                                                                         
Query: 378   atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaac 437
             ||||||||||||||||||||||||||| | ||||| || || || |||||||| ||||||
Sbjct: 14435 atcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaac 14376

                                                                         
Query: 438   aaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagct 497
             ||||||||||| ||||| || || |||||||| || |||   |||| ||||||| |||||
Sbjct: 14375 aaccagatggttaacgcaacactcatgaacattgctgat-aacccaaccaacgtccagct 14317

                                                                         
Query: 498   ccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacga 557
             ||| || |||||||||||||| |||||| | ||||| |||||| |   ||| ||||||||
Sbjct: 14316 cccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacga 14257

                                                                         
Query: 558   tttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctactggg 617
             |||||| || || ||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 14256 tttctccaccctatacgctcctctcatccgtgatggacgtat-ggagaagttctactggg 14198

                                   
Query: 618   ctcccacccgtgacgaccgtat 639
             | || |||||||| ||||||||
Sbjct: 14197 ccccgacccgtgaagaccgtat 14176



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                         
Query: 171   ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 230
             ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 14733 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 14674

                                    
Query: 231   gtgttcgccaagatgggcatcaa 253
             ||  | ||||||||||| |||||
Sbjct: 14673 gtcatggccaagatgggtatcaa 14651



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                         
Query: 93    tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 152
             ||||| ||||||||||||||||||||||||||||| ||  || |||| |||||| |||| 
Sbjct: 14910 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 14851

                            
Query: 153   ctgcccaacatcaag 167
             ||||| |||||||||
Sbjct: 14850 ctgcctaacatcaag 14836

---

>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase
            activase (rca) gene, complete cds
          Length = 3974

 Score =  305 bits (154), Expect = 9e-80
 Identities = 327/382 (85%), Gaps = 2/382 (0%)
 Strand = Plus / Plus

                                                                        
Query: 258  atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 317
            |||||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| |||
Sbjct: 2728 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatc 2787

                                                                        
Query: 318  aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 377
             | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||||||
Sbjct: 2788 cgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttc 2847

                                                                        
Query: 378  atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaac 437
            ||||||||||||||||||||||||||| | ||||| || || || |||||||| ||||||
Sbjct: 2848 atcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaac 2907

                                                                        
Query: 438  aaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagct 497
            ||||||||||| ||||| || || |||||||| || |||   |||| ||||||| |||||
Sbjct: 2908 aaccagatggttaacgcaacactcatgaacattgctgat-aacccaaccaacgtccagct 2966

                                                                        
Query: 498  ccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacga 557
            ||| || |||||||||||||| |||||| | ||||| |||||| |   ||| ||||||||
Sbjct: 2967 cccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacga 3026

                                                                        
Query: 558  tttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctactggg 617
            |||||| || || ||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 3027 tttctccaccctatacgctcctctcatccgtgatggacgtat-ggagaagttctactggg 3085

                                  
Query: 618  ctcccacccgtgacgaccgtat 639
            | || |||||||| ||||||||
Sbjct: 3086 ccccgacccgtgaagaccgtat 3107



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                        
Query: 171  ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 230
            ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 2550 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 2609

                                   
Query: 231  gtgttcgccaagatgggcatcaa 253
            ||  | ||||||||||| |||||
Sbjct: 2610 gtcatggccaagatgggtatcaa 2632



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                        
Query: 93   tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 152
            ||||| ||||||||||||||||||||||||||||| ||  || |||| |||||| |||| 
Sbjct: 2373 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 2432

                           
Query: 153  ctgcccaacatcaag 167
            ||||| |||||||||
Sbjct: 2433 ctgcctaacatcaag 2447

---

>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase
           (pJQ4)
          Length = 1655

 Score =  303 bits (153), Expect = 4e-79
 Identities = 437/529 (82%), Gaps = 2/529 (0%)
 Strand = Plus / Plus

                                                                       
Query: 90  ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 149
           ||||||||||||||| |||||||||||||||||||||| ||  || |||| |||||| ||
Sbjct: 426 ttctacatcgctccttctttcatggacaagcttgttgttcacatcaccaagaacttcttg 485

                                                                       
Query: 150 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 209
           |   |||||||||||||| | |||||||| |||||| ||||||||||||| |||||||| 
Sbjct: 486 aaattgcccaacatcaaggttccactcattttgggtgtctggggaggcaaaggtcaaggt 545

                                                                       
Query: 210 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 269
           ||||| ||||||||||||||||| |||   |||||||| |||||||| || |||||||||
Sbjct: 546 aaatctttccagtgtgagcttgtcttcagaaagatgggaatcaaccctattatgatgagt 605

                                                                       
Query: 270 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 329
           ||||||||  |||| ||||| || || |||||||| || ||  | || |||||  |||||
Sbjct: 606 gccggagaattggaaagtggaaatgcaggagagcctgcaaaattgattaggcaaaggtac 665

                                                                       
Query: 330 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 389
            | ||||| ||||| || |||| ||| || || || || |||||||||||||||||||| 
Sbjct: 666 agagaggcagcagaaatcatcaggaaaggaaacatctgttgcctcttcatcaacgatctc 725

                                                                       
Query: 390 gacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtg 449
           || || || || ||||| ||||| ||||| || || ||||| ||||||||||||||||||
Sbjct: 726 gatgcaggagctggtagaatgggtggaactacccaatacactgtcaacaaccagatggtg 785

                                                                       
Query: 450 aacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccctggcatgta 509
           || ||||| || |||||||| || |||  ||| | | ||||| |||||||| || |||||
Sbjct: 786 aatgccactctcatgaacattgctgataacccga-caaacgtccagctccccggtatgta 844

                                                                       
Query: 510 caacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgct 569
           ||||||| | |||||| || | || |||||  | ||||| |||||||| ||||| ||  |
Sbjct: 845 caacaagcaagagaacgccagagtccccattattgtcactggtaacgacttctccacatt 904

                                                            
Query: 570 ctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggc 618
            || |||||||| ||||||||||||||||| |||||||||||| |||||
Sbjct: 905 gtatgctcctcttatccgtgatggtcgtat-ggagaagttctattgggc 952

---

>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase pseudogene, partial sequence
          Length = 472

 Score =  301 bits (152), Expect = 1e-78
 Identities = 361/424 (85%), Gaps = 5/424 (1%)
 Strand = Plus / Plus

                                                                       
Query: 198 aagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccc 257
           ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| ||||  || 
Sbjct: 1   aagggtcaaggaaaatctttccaatgtgaacttgtttttgccaagatgggaatcactcct 60

                                                                       
Query: 258 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 317
           ||||||||||||||||||||  | || ||||| ||||||| ||||||||| |||||||||
Sbjct: 61  atcatgatgagtgccggagaattagaaagtgg-aacgctg-agagccagctaagctcatc 118

                                                                       
Query: 318 aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 377
           || ||||| ||||||||||| || || || |||||||||||||| ||||||||| | |||
Sbjct: 119 agacagcg-taccgtgaggcagccgatatcatcaagaagggtaaaatgtgctgcttgttc 177

                                                                       
Query: 378 atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaac 437
           |||||||||||||| |||||||| ||||| ||||| ||||| || || ||||| ||||||
Sbjct: 178 atcaacgatcttgatgctggtgcaggtagaatgggaggaactacacaatacacagtcaac 237

                                                                       
Query: 438 aaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagct 497
           || |||||||| || || || || |||||||| || |||   |||| |||| || || ||
Sbjct: 238 aatcagatggttaatgctacactcatgaacattgctgat-aacccaaccaatgtccaact 296

                                                                       
Query: 498 ccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacga 557
           |||||| |||||| ||||||||||||||||||||||||||||| ||||||| || |||||
Sbjct: 297 ccctggaatgtacgacaaggaggagaacccccgtgtgcccatcatcgtcacaggaaacga 356

                                                                       
Query: 558 tttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctactggg 617
           ||||||  | || || ||||| || ||||| ||||||||||| ||| |||||||||||||
Sbjct: 357 tttctcagcactatatgctccccttatccgcgatggtcgtat-ggaaaagttctactggg 415

               
Query: 618 ctcc 621
           ||||
Sbjct: 416 ctcc 419

---

>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score =  276 bits (139), Expect = 8e-71
 Identities = 324/383 (84%), Gaps = 2/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 109 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 168

                                                                       
Query: 314 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
            ||| | ||||| ||||||||||| || ||| |||||  |||||| ||||||| ||||||
Sbjct: 169 gatccgtcagcgctaccgtgaggccgcggacctgatctcgaagggcaagatgtcctgcct 228

                                                                       
Query: 374 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
            |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 229 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 288

                                                                       
Query: 434 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
            |||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||
Sbjct: 289 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccca-ccaacgtgc 347

                                                                       
Query: 494 agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
           ||||||| || ||||||| ||||| ||| ||||| ||||||||||||||||||||||| |
Sbjct: 348 agctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcgtcgtcaccggca 407

                                                                       
Query: 554 acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
           |||| ||||| ||||| ||||| || || || || || || || || ||| |||||||||
Sbjct: 408 acgacttctccacgctgtacgcgccgctcattcgcgacgggcgcat-ggacaagttctac 466

                                  
Query: 614 tgggctcccacccgtgacgaccg 636
           ||||| |||||||| ||||||||
Sbjct: 467 tgggcgcccacccgcgacgaccg 489

---

>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence
          Length = 633

 Score =  276 bits (139), Expect = 8e-71
 Identities = 324/383 (84%), Gaps = 2/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182

                                                                       
Query: 314 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242

                                                                       
Query: 374 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
            |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 243 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 302

                                                                       
Query: 434 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
            |||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||
Sbjct: 303 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccca-ccaacgtgc 361

                                                                       
Query: 494 agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
           ||||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| |
Sbjct: 362 agctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggca 421

                                                                       
Query: 554 acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
           |||| ||||| ||||| ||||| || || |||||||| || || || ||| |||||||||
Sbjct: 422 acgacttctccacgctgtacgcgccgctcatccgtgacgggcgcat-ggacaagttctac 480

                                  
Query: 614 tgggctcccacccgtgacgaccg 636
           ||||| |||||||| ||||||||
Sbjct: 481 tgggcgcccacccgcgacgaccg 503

---

>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence
          Length = 635

 Score =  276 bits (139), Expect = 8e-71
 Identities = 324/383 (84%), Gaps = 2/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                       
Query: 314 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                                                       
Query: 374 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
            |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304

                                                                       
Query: 434 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
            |||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||
Sbjct: 305 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccca-ccaacgtgc 363

                                                                       
Query: 494 agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
           ||||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| |
Sbjct: 364 agctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggca 423

                                                                       
Query: 554 acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
           |||| ||||| ||||| ||||| || || |||||||| || || || ||| |||||||||
Sbjct: 424 acgacttctccacgctgtacgcgccgctcatccgtgacgggcgcat-ggacaagttctac 482

                                  
Query: 614 tgggctcccacccgtgacgaccg 636
           ||||| |||||||| ||||||||
Sbjct: 483 tgggcgcccacccgcgacgaccg 505

---

>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence
          Length = 639

 Score =  276 bits (139), Expect = 8e-71
 Identities = 324/383 (84%), Gaps = 2/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 129 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 188

                                                                       
Query: 314 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 189 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 248

                                                                       
Query: 374 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
            |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 249 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 308

                                                                       
Query: 434 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
            |||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||
Sbjct: 309 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccca-ccaacgtgc 367

                                                                       
Query: 494 agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
           ||||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| |
Sbjct: 368 agctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggca 427

                                                                       
Query: 554 acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
           |||| ||||| ||||| ||||| || || |||||||| || || || ||| |||||||||
Sbjct: 428 acgacttctccacgctgtacgcgccgctcatccgtgacgggcgcat-ggacaagttctac 486

                                  
Query: 614 tgggctcccacccgtgacgaccg 636
           ||||| |||||||| ||||||||
Sbjct: 487 tgggcgcccacccgcgacgaccg 509

---

>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence
          Length = 635

 Score =  276 bits (139), Expect = 8e-71
 Identities = 324/383 (84%), Gaps = 2/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                       
Query: 314 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                                                       
Query: 374 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
            |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304

                                                                       
Query: 434 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
            |||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||
Sbjct: 305 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccca-ccaacgtgc 363

                                                                       
Query: 494 agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
           ||||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| |
Sbjct: 364 agctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggca 423

                                                                       
Query: 554 acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
           |||| ||||| ||||| ||||| || || |||||||| || || || ||| |||||||||
Sbjct: 424 acgacttctccacgctgtacgcgccgctcatccgtgacgggcgcat-ggacaagttctac 482

                                  
Query: 614 tgggctcccacccgtgacgaccg 636
           ||||| |||||||| ||||||||
Sbjct: 483 tgggcgcccacccgcgacgaccg 505

---

>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score =  276 bits (139), Expect = 8e-71
 Identities = 324/383 (84%), Gaps = 2/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 117 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 176

                                                                       
Query: 314 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
            ||| | ||||| ||||||||||| || ||| |||||  |||||| ||||||| ||||||
Sbjct: 177 gatccgtcagcgctaccgtgaggcggcggacctgatctcgaagggcaagatgtcctgcct 236

                                                                       
Query: 374 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
            |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 237 gttcatcaacgatctggacgccggcgcaggccgcatgggcggcaccacccagtacacggt 296

                                                                       
Query: 434 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
            |||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||
Sbjct: 297 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccca-ccaacgtgc 355

                                                                       
Query: 494 agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
           ||||||| || ||||||| ||||| ||| ||||| ||||||||||||||||||||||| |
Sbjct: 356 agctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcgtcgtcaccggca 415

                                                                       
Query: 554 acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
           |||| ||||| ||||| ||||| || || ||||| || || || || ||| |||||||||
Sbjct: 416 acgacttctccacgctgtacgcgccgctcatccgcgacgggcgcat-ggacaagttctac 474

                                  
Query: 614 tgggctcccacccgtgacgaccg 636
           ||||| |||||||| || |||||
Sbjct: 475 tgggcgcccacccgggaggaccg 497

---

>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence
          Length = 635

 Score =  276 bits (139), Expect = 8e-71
 Identities = 324/383 (84%), Gaps = 2/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                       
Query: 314 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                                                       
Query: 374 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
            |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304

                                                                       
Query: 434 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
            |||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||
Sbjct: 305 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccca-ccaacgtgc 363

                                                                       
Query: 494 agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
           ||||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| |
Sbjct: 364 agctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggca 423

                                                                       
Query: 554 acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
           |||| ||||| ||||| ||||| || || |||||||| || || || ||| |||||||||
Sbjct: 424 acgacttctccacgctgtacgcgccgctcatccgtgacgggcgcat-ggacaagttctac 482

                                  
Query: 614 tgggctcccacccgtgacgaccg 636
           ||||| |||||||| ||||||||
Sbjct: 483 tgggcgcccacccgcgacgaccg 505

---

>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence
          Length = 635

 Score =  276 bits (139), Expect = 8e-71
 Identities = 324/383 (84%), Gaps = 2/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                       
Query: 314 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                                                       
Query: 374 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
            |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304

                                                                       
Query: 434 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
            |||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||
Sbjct: 305 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccca-ccaacgtgc 363

                                                                       
Query: 494 agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
           ||||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| |
Sbjct: 364 agctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggca 423

                                                                       
Query: 554 acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
           |||| ||||| ||||| ||||| || || |||||||| || || || ||| |||||||||
Sbjct: 424 acgacttctccacgctgtacgcgccgctcatccgtgacgggcgcat-ggacaagttctac 482

                                  
Query: 614 tgggctcccacccgtgacgaccg 636
           ||||| |||||||| ||||||||
Sbjct: 483 tgggcgcccacccgcgacgaccg 505

---

>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence
          Length = 635

 Score =  276 bits (139), Expect = 8e-71
 Identities = 324/383 (84%), Gaps = 2/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                       
Query: 314 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                                                       
Query: 374 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
            |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304

                                                                       
Query: 434 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
            |||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||
Sbjct: 305 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccca-ccaacgtgc 363

                                                                       
Query: 494 agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
           ||||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| |
Sbjct: 364 agctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggca 423

                                                                       
Query: 554 acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
           |||| ||||| ||||| ||||| || || |||||||| || || || ||| |||||||||
Sbjct: 424 acgacttctccacgctgtacgcgccgctcatccgtgacgggcgcat-ggacaagttctac 482

                                  
Query: 614 tgggctcccacccgtgacgaccg 636
           ||||| |||||||| ||||||||
Sbjct: 483 tgggcgcccacccgcgacgaccg 505

---

>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence
          Length = 637

 Score =  276 bits (139), Expect = 8e-71
 Identities = 324/383 (84%), Gaps = 2/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 127 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 186

                                                                       
Query: 314 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 187 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 246

                                                                       
Query: 374 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
            |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 247 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 306

                                                                       
Query: 434 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
            |||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||
Sbjct: 307 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccca-ccaacgtgc 365

                                                                       
Query: 494 agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
           ||||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| |
Sbjct: 366 agctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggca 425

                                                                       
Query: 554 acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
           |||| ||||| ||||| ||||| || || |||||||| || || || ||| |||||||||
Sbjct: 426 acgacttctccacgctgtacgcgccgctcatccgtgacgggcgcat-ggacaagttctac 484

                                  
Query: 614 tgggctcccacccgtgacgaccg 636
           ||||| |||||||| ||||||||
Sbjct: 485 tgggcgcccacccgcgacgaccg 507

---

>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds
          Length = 1063

 Score =  268 bits (135), Expect = 2e-68
 Identities = 353/423 (83%), Gaps = 2/423 (0%)
 Strand = Plus / Plus

                                                                       
Query: 199 agggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccca 258
           |||| ||||||||||| |||||   ||||||||| || ||||||||||| ||||||||||
Sbjct: 7   agggacaaggaaaatctttccaagctgagcttgtctttgccaagatgggaatcaacccca 66

                                                                       
Query: 259 tcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatca 318
           ||||||||||||| |||||||| || ||||| || || ||||||||||| ||  | ||||
Sbjct: 67  tcatgatgagtgctggagagcttgaaagtggaaatgcaggagagccagcaaaattgatca 126

                                                                       
Query: 319 ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 378
           | ||| | |||||||| ||  | ||||| |||| ||| || |||||||| || || ||||
Sbjct: 127 gacagagataccgtgaagcctctgacattatcaggaaaggaaagatgtgttgtctgttca 186

                                                                       
Query: 379 tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 438
           |||||||||| || || || || ||| | ||||| |||||||| || ||||| |||||||
Sbjct: 187 tcaacgatctcgatgcaggagcaggtcgtatgggtggaaccacacaatacactgtcaaca 246

                                                                       
Query: 439 accagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctc 498
           |||| |||||||| ||||| || |||||||| || |||  ||||| |||| || || |||
Sbjct: 247 accaaatggtgaatgccacactcatgaacattgctgataacccca-ccaatgtccaactc 305

                                                                       
Query: 499 cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 558
           ||||| |||||||||||||| || ||  | |||||||||||| | ||||||||||| |||
Sbjct: 306 cctggtatgtacaacaaggaagacaatgctcgtgtgcccatcattgtcaccggtaatgat 365

                                                                       
Query: 559 ttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggc 618
           ||||| || || || |||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 366 ttctcaacactttatgctcctctcatccgtgatggtcgtat-ggagaagttctactgggc 424

              
Query: 619 tcc 621
           |||
Sbjct: 425 tcc 427

---

>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence
          Length = 637

 Score =  268 bits (135), Expect = 2e-68
 Identities = 323/383 (84%), Gaps = 2/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 127 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 186

                                                                       
Query: 314 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 187 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 246

                                                                       
Query: 374 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
            |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 247 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 306

                                                                       
Query: 434 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
            |||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||
Sbjct: 307 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccca-ccaacgtgc 365

                                                                       
Query: 494 agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
           ||||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| |
Sbjct: 366 agctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggca 425

                                                                       
Query: 554 acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
           |||| ||||| ||||| ||||| || || ||||| || || || || ||| |||||||||
Sbjct: 426 acgacttctccacgctgtacgcgccgctcatccgcgacgggcgcat-ggacaagttctac 484

                                  
Query: 614 tgggctcccacccgtgacgaccg 636
           ||||| |||||||| ||||||||
Sbjct: 485 tgggcgcccacccgcgacgaccg 507

---

>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence
          Length = 635

 Score =  268 bits (135), Expect = 2e-68
 Identities = 323/383 (84%), Gaps = 2/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                       
Query: 314 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                                                       
Query: 374 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
            |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304

                                                                       
Query: 434 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
            |||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||
Sbjct: 305 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccca-ccaacgtgc 363

                                                                       
Query: 494 agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
           ||||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| |
Sbjct: 364 agctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggca 423

                                                                       
Query: 554 acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
           |||| ||||| ||||| ||||| || || ||||| || || || || ||| |||||||||
Sbjct: 424 acgacttctccacgctgtacgcgccgctcatccgcgacgggcgcat-ggacaagttctac 482

                                  
Query: 614 tgggctcccacccgtgacgaccg 636
           ||||| |||||||| ||||||||
Sbjct: 483 tgggcgcccacccgcgacgaccg 505

---

>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence
          Length = 633

 Score =  268 bits (135), Expect = 2e-68
 Identities = 323/383 (84%), Gaps = 2/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182

                                                                       
Query: 314 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242

                                                                       
Query: 374 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
            |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 243 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 302

                                                                       
Query: 434 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
            |||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||
Sbjct: 303 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccca-ccaacgtgc 361

                                                                       
Query: 494 agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
           ||||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| |
Sbjct: 362 agctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggca 421

                                                                       
Query: 554 acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
           |||| ||||| ||||| ||||| || || ||||| || || || || ||| |||||||||
Sbjct: 422 acgacttctccacgctgtacgcgccgctcatccgcgacgggcgcat-ggacaagttctac 480

                                  
Query: 614 tgggctcccacccgtgacgaccg 636
           ||||| |||||||| ||||||||
Sbjct: 481 tgggcgcccacccgcgacgaccg 503

---

>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence
          Length = 633

 Score =  268 bits (135), Expect = 2e-68
 Identities = 323/383 (84%), Gaps = 2/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182

                                                                       
Query: 314 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242

                                                                       
Query: 374 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
            |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 243 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 302

                                                                       
Query: 434 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
            |||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||
Sbjct: 303 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccca-ccaacgtgc 361

                                                                       
Query: 494 agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
           ||||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| |
Sbjct: 362 agctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggca 421

                                                                       
Query: 554 acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
           |||| ||||| ||||| ||||| || || ||||| || || || || ||| |||||||||
Sbjct: 422 acgacttctccacgctgtacgcgccgctcatccgcgacgggcgcat-ggacaagttctac 480

                                  
Query: 614 tgggctcccacccgtgacgaccg 636
           ||||| |||||||| ||||||||
Sbjct: 481 tgggcgcccacccgcgacgaccg 503

---

>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence
          Length = 635

 Score =  268 bits (135), Expect = 2e-68
 Identities = 323/383 (84%), Gaps = 2/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                       
Query: 314 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                                                       
Query: 374 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
            |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304

                                                                       
Query: 434 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
            |||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||
Sbjct: 305 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccca-ccaacgtgc 363

                                                                       
Query: 494 agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
           ||||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| |
Sbjct: 364 agctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggca 423

                                                                       
Query: 554 acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
           |||| ||||| ||||| ||||| || || ||||| || || || || ||| |||||||||
Sbjct: 424 acgacttctccacgctgtacgcgccgctcatccgcgacgggcgcat-ggacaagttctac 482

                                  
Query: 614 tgggctcccacccgtgacgaccg 636
           ||||| |||||||| ||||||||
Sbjct: 483 tgggcgcccacccgcgacgaccg 505

---

>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence
          Length = 639

 Score =  268 bits (135), Expect = 2e-68
 Identities = 323/383 (84%), Gaps = 2/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 129 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 188

                                                                       
Query: 314 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 189 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 248

                                                                       
Query: 374 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
            |||||||||||||| ||||| || || ||  | |||||||| ||||| |||||||| ||
Sbjct: 249 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 308

                                                                       
Query: 434 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
            |||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||
Sbjct: 309 gaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccca-ccaacgtgc 367

                                                                       
Query: 494 agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
           ||||||| || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| |
Sbjct: 368 agctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggca 427

                                                                       
Query: 554 acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
           |||| ||||| ||||| ||||| || || ||||| || || || || ||| |||||||||
Sbjct: 428 acgacttctccacgctgtacgcgccgctcatccgcgacgggcgcat-ggacaagttctac 486

                                  
Query: 614 tgggctcccacccgtgacgaccg 636
           ||||| |||||||| ||||||||
Sbjct: 487 tgggcgcccacccgcgacgaccg 509

---

>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score =  256 bits (129), Expect = 8e-65
 Identities = 431/529 (81%), Gaps = 2/529 (0%)
 Strand = Plus / Plus

                                                                       
Query: 90  ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 149
           |||||||||||||||||||||||||||||||||||||| ||  || |||| |||||| | 
Sbjct: 473 ttctacatcgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttctta 532

                                                                       
Query: 150 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 209
           ||  |||||||||||||| | ||||| || |||||| | |||||||| || |||||||| 
Sbjct: 533 acgttgcccaacatcaaggttccacttattttgggtgtttggggaggaaaaggtcaaggt 592

                                                                       
Query: 210 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 269
           ||||||||||| ||||||||||| |||   |||||||| |||||||| || |||||||||
Sbjct: 593 aaatcattccaatgtgagcttgtcttcagaaagatgggaatcaacccaattatgatgagt 652

                                                                       
Query: 270 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 329
           || |||||  | || ||||| || || ||||||||||| ||  | ||||||||  |||||
Sbjct: 653 gctggagaattagaaagtggaaatgcaggagagccagctaaattgatcaggcaaaggtac 712

                                                                       
Query: 330 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 389
            | ||||| || || || |||| |||||| || ||||| |||||||||||||||||||||
Sbjct: 713 agagaggccgcggaaatcatcaggaagggaaacatgtgttgcctcttcatcaacgatctt 772

                                                                       
Query: 390 gacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtg 449
           || || || || ||||| ||||| ||||| || || ||||| ||||||||||| ||||||
Sbjct: 773 gatgcaggagccggtagaatgggtggaactacacaatacactgtcaacaaccaaatggtg 832

                                                                       
Query: 450 aacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccctggcatgta 509
           || || || || |||||||| || |||  ||| | | || || || ||||| || |||||
Sbjct: 833 aatgctacactcatgaacattgctgataacccga-cgaatgtccaactccccggtatgta 891

                                                                       
Query: 510 caacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgct 569
           ||||||| | |||||  || | || || ||  | ||||| |||||||||||||| ||  |
Sbjct: 892 caacaagcaagagaatgccagggtacctattattgtcactggtaacgatttctccacatt 951

                                                            
Query: 570 ctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggc 618
            || || ||||| ||||||||||||||||| |||||| |||||||||||
Sbjct: 952 gtatgcacctcttatccgtgatggtcgtat-ggagaaattctactgggc 999

---

>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase
            {alternatively spliced} [spinach, Genomic, 3691 nt]
          Length = 3691

 Score =  228 bits (115), Expect = 2e-56
 Identities = 323/387 (83%), Gaps = 4/387 (1%)
 Strand = Plus / Plus

                                                                        
Query: 254  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
            ||||||||||||||||||||||||  |||| ||||| || || ||||||||||| ||| |
Sbjct: 2421 ccccatcatgatgagtgccggagaattggaaagtggaaatgcaggagagccagctaagtt 2480

                                                                        
Query: 314  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-c 372
             ||||||||  ||||||||||||| |||||| ||||    |||||||||||||| ||| |
Sbjct: 2481 gatcaggcaaaggtaccgtgaggcagcagacttgattgctaagggtaagatgtg-tgctc 2539

                                                                        
Query: 373  tcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccg 432
            | |||||||||||||| ||  | ||||| ||  | ||||| || ||||| || |||||||
Sbjct: 2540 tattcatcaacgatctggaacccggtgctggacgtatgggaggcaccacccaatacaccg 2599

                                                                        
Query: 433  tcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtg 492
            | |||||||||||||| |||||||| || |||||||| || ||   ||| ||| || || 
Sbjct: 2600 taaacaaccagatggttaacgccacactcatgaacattgctgacaacccaacc-aatgtc 2658

                                                                        
Query: 493  cagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggt 552
            || |||||||| |||||||||||| |||| ||  ||||||| |||||| | || || |||
Sbjct: 2659 caactccctggtatgtacaacaagcaggacaatgcccgtgtccccatcattgttactggt 2718

                                                                        
Query: 553  aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttcta 612
            ||||||||||| ||  | |||||||| || ||||||||||||||||| ||||||||||||
Sbjct: 2719 aacgatttctccaccttgtacgctccccttatccgtgatggtcgtat-ggagaagttcta 2777

                                       
Query: 613  ctgggctcccacccgtgacgaccgtat 639
            |||||||||||||||||| ||||||||
Sbjct: 2778 ctgggctcccacccgtgaggaccgtat 2804



 Score =  105 bits (53), Expect = 2e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                        
Query: 166  agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 225
            |||| ||||||||||||||| | |||||||||||||||||||| ||||| ||||| ||||
Sbjct: 2238 agataccactcatcttgggtgtttggggaggcaagggtcaaggtaaatccttccaatgtg 2297

                             
Query: 226  agcttgtgttcgccaag 242
            |||||||||||||||||
Sbjct: 2298 agcttgtgttcgccaag 2314



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                        
Query: 89   cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 148
            ||||||||| || ||||| || ||||||||||||||||| ||  || |||| |||||| |
Sbjct: 2067 cttctacattgcccctgcctttatggacaagcttgttgttcacatcaccaagaacttctt 2126

                               
Query: 149  gaccctgcccaacatcaag 167
            || | ||||||||||||||
Sbjct: 2127 gaacttgcccaacatcaag 2145

---

>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds
          Length = 1216

 Score =  198 bits (100), Expect = 2e-47
 Identities = 306/372 (82%), Gaps = 2/372 (0%)
 Strand = Plus / Plus

                                                                       
Query: 254 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 313
           ||||||||||||||||||||||||  ||||||| || ||||| |||||||| || ||| |
Sbjct: 467 ccccatcatgatgagtgccggagaattggagagcggcaacgcaggagagcccgcgaagtt 526

                                                                       
Query: 314 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 373
            |||||||| ||||  |||||||| || ||||| ||||||||||| |||||||  |||||
Sbjct: 527 gatcaggcaacggtgtcgtgaggcggccgacatcatcaagaagggaaagatgtcttgcct 586

                                                                       
Query: 374 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 433
            || ||||| |||||||| || ||||| |||||| | || || || || || ||||| ||
Sbjct: 587 atttatcaatgatcttgatgcaggtgccggtaggcttggtgggacaactcaatacactgt 646

                                                                       
Query: 434 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgc 493
            |||||||| |||||||| || ||||| |||||||| || ||     ||| |||| || |
Sbjct: 647 gaacaaccaaatggtgaatgctaccctcatgaacattgctga-caatccaaccaatgttc 705

                                                                       
Query: 494 agctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggta 553
           ||||||| || |||||||||||||| ||||| || ||||| || ||| ||||||| ||||
Sbjct: 706 agctcccgggtatgtacaacaaggaagagaatccacgtgtaccgatcatcgtcacaggta 765

                                                                       
Query: 554 acgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctac 613
           | || ||||||||  | ||||||||||| || |||||||||||||| |||||| ||||||
Sbjct: 766 atgacttctcgacattgtacgctcctctcattcgtgatggtcgtat-ggagaaattctac 824

                       
Query: 614 tgggctcccacc 625
           ||||| ||||||
Sbjct: 825 tgggcgcccacc 836



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 72/80 (90%)
 Strand = Plus / Plus

                                                                       
Query: 174 ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 233
           ||||| ||||||||||||||||| || |||||||| ||||| ||||||||||||||||| 
Sbjct: 186 ctcattttgggtatctggggaggtaaaggtcaaggtaaatctttccagtgtgagcttgtc 245

                               
Query: 234 ttcgccaagatgggcatcaa 253
           || ||||||||||| |||||
Sbjct: 246 tttgccaagatgggaatcaa 265



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 90  ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 149
           |||||||| ||||| |||||||||||||||||||| || ||  || ||||||||||||||
Sbjct: 6   ttctacatagctccagctttcatggacaagcttgtcgttcacatcaccaaaaacttcatg 65

             
Query: 150 ac 151
           ||
Sbjct: 66  ac 67

---

>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  196 bits (99), Expect = 6e-47
 Identities = 170/191 (89%), Gaps = 2/191 (1%)
 Strand = Plus / Plus

                                                                       
Query: 447 gtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccctggcat 506
           |||||||||||||||||||||||||||||    |||| |||||||||||||||| || ||
Sbjct: 1   gtgaacgccaccctgatgaacatcgccga-caacccaaccaacgtgcagctccccgggat 59

                                                                       
Query: 507 gtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgac 566
           ||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||
Sbjct: 60  gtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccac 119

                                                                       
Query: 567 gctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctcccaccc 626
           ||| ||||| || || |||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 120 gctgtacgcgccgctcatccgtgacgggcgtat-ggagaagttctactgggctcccaccc 178

                      
Query: 627 gtgacgaccgt 637
           | |||||||||
Sbjct: 179 gcgacgaccgt 189

---

>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene)
          Length = 678

 Score =  192 bits (97), Expect = 1e-45
 Identities = 420/525 (80%), Gaps = 2/525 (0%)
 Strand = Plus / Plus

                                                                       
Query: 92  ctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgac 151
           |||||| ||||||||||| ||||||||||||||||| ||  |||| ||||||||||||| 
Sbjct: 156 ctacattgctcctgcttttatggacaagcttgttgttcacatctcgaaaaacttcatgaa 215

                                                                       
Query: 152 cctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaa 211
           | |||| ||||||||| | || |||||  | ||||| |||||||||||||||||||||||
Sbjct: 216 cttgcctaacatcaaggttcctctcattcttggtatttggggaggcaagggtcaaggaaa 275

                                                                       
Query: 212 atcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgc 271
            || ||||| ||||||||||| || || ||  |||| |||||||| || |||||||||||
Sbjct: 276 gtccttccaatgtgagcttgtatttgcaaaattgggaatcaacccaattatgatgagtgc 335

                                                                       
Query: 272 cggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccg 331
           ||| || |||||||||||  | || |||||||| || ||  | |||||  |||| |||||
Sbjct: 336 cggtgaactggagagtggagatgcaggagagcccgcaaaattgatcagaaagcgataccg 395

                                                                       
Query: 332 tgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttga 391
           ||| || || |||||  ||||||| || ||||||||    |||||||| || ||||| ||
Sbjct: 396 tgaagcggccgacattgtcaagaaaggaaagatgtgtgtgctcttcattaatgatctgga 455

                                                                       
Query: 392 cgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaa 451
            || || || || || |||||  | || || |||||||| || |||||||||||||| ||
Sbjct: 456 tgcaggagctggaagaatgggtagcacaactcagtacactgtgaacaaccagatggtcaa 515

                                                                       
Query: 452 cgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccctggcatgtaca 511
            |||||||| |||||||| || |||   |||| | || || ||| | ||||| |||||||
Sbjct: 516 tgccaccctcatgaacattgctgat-aacccaacgaatgttcagttgcctggaatgtaca 574

                                                                       
Query: 512 acaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctct 571
           ||||||| || || || ||||| || || || || || || || |||||||| ||  | |
Sbjct: 575 acaaggaagaaaatcctcgtgttccaattgttgtgacaggaaatgatttctcaactttgt 634

                                                        
Query: 572 acgctcctctgatccgtgatggtcgtatgggagaagttctactgg 616
           | |||||  |||| |||||||| ||||| ||||||||||||||||
Sbjct: 635 atgctccattgattcgtgatgggcgtat-ggagaagttctactgg 678

---

>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score =  184 bits (93), Expect = 2e-43
 Identities = 320/393 (81%), Gaps = 2/393 (0%)
 Strand = Plus / Plus

                                                                        
Query: 244  tgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagc 303
            ||||||||| ||||||| | |||  |||||| |||||||||  ||| ||||| || ||||
Sbjct: 1443 tgggcatcagccccatcgtcatgtctgccggtgagctggagtctggtaacgccggtgagc 1502

                                                                        
Query: 304  cagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaaga 363
            | |||||||||||| | ||||| ||||| |||||| | ||||   | |||||||| ||||
Sbjct: 1503 ccgccaagctcatccgccagcgctaccgcgaggcttccgacagcgtgaagaagggcaaga 1562

                                                                        
Query: 364  tgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgc 423
            |||||| |||||||||||||||||| ||||||||||| ||  | ||||||     ||| |
Sbjct: 1563 tgtgctccctcttcatcaacgatctggacgctggtgctggccgcatgggcatgggcaccc 1622

                                                                        
Query: 424  agtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccca 483
            ||||||| ||||||||||||||||| ||||| ||||| ||||||||||| |||  ||| |
Sbjct: 1623 agtacactgtcaacaaccagatggtcaacgctaccctcatgaacatcgctgataacccta 1682

                                                                        
Query: 484  cccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 543
             ||||||||||||| || ||| |||||||  ||| | |||  |||||||| ||||| |||
Sbjct: 1683 -ccaacgtgcagctgcccggcgtgtacaaggaggtgcagattccccgtgttcccattgtc 1741

                                                                        
Query: 544  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggga 603
              ||| |||||||||||||| || || ||||| || || |||||||| || || || |||
Sbjct: 1742 tgcacgggtaacgatttctccaccctgtacgcccccctcatccgtgacggccgcat-gga 1800

                                             
Query: 604  gaagttctactgggctcccacccgtgacgaccg 636
            ||||| |||||||   ||||||||||| |||||
Sbjct: 1801 gaagtactactggaaccccacccgtgaggaccg 1833



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 102/125 (81%)
 Strand = Plus / Plus

                                                                        
Query: 87   ggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttc 146
            |||||||||||| ||||||||||| |||| ||| |     ||||| |  |||| ||||||
Sbjct: 1128 ggcttctacatctctcctgctttcctggataagatgaccatccatgttgccaagaacttc 1187

                                                                        
Query: 147  atgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaa 206
            |||  ||||||||| |||||| | || |||||| ||||||||||||| |||||||| || 
Sbjct: 1188 atggacctgcccaagatcaaggttcccctcatcctgggtatctggggtggcaagggccag 1247

                 
Query: 207  ggaaa 211
            |||||
Sbjct: 1248 ggaaa 1252

---

>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  174 bits (88), Expect = 2e-40
 Identities = 113/120 (94%), Gaps = 1/120 (0%)
 Strand = Plus / Plus

                                                                       
Query: 520 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 579
           |||||||| |||||||||||||||||||| |||||||||||||||||| | ||||| |||
Sbjct: 1   gagaacccacgtgtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcccct 60

                                                                       
Query: 580 ctgatccgtgatggtcgtatgggagaagttctactgggctcccacccgtgacgaccgtat 639
           |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 61  ctgatccgtgatggtcgtat-ggagaagttctactgggctcccacccgcgacgaccgtat 119

---

>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase
           (pTA1.1)
          Length = 1011

 Score =  143 bits (72), Expect = 8e-31
 Identities = 212/256 (82%), Gaps = 2/256 (0%)
 Strand = Plus / Plus

                                                                       
Query: 363 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 422
           ||||| |||||||||||||||||||| || || || || ||||| ||||| ||||| || 
Sbjct: 55  atgtgttgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacc 114

                                                                       
Query: 423 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 482
           || ||||| |||||||||||||||||||| ||||| || ||||||||||| |||  ||| 
Sbjct: 115 caatacactgtcaacaaccagatggtgaatgccactctcatgaacatcgctgataacccg 174

                                                                       
Query: 483 acccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 542
           | | || || |||||||| || |||||||||||| | |||||| || | || |||||  |
Sbjct: 175 a-caaatgtccagctccccggtatgtacaacaagcaagagaacgccagggtccccattat 233

                                                                       
Query: 543 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggg 602
            ||||| |||||||| ||||| ||  | || |||||||| ||||||||||||||||| ||
Sbjct: 234 tgtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtat-gg 292

                           
Query: 603 agaagttctactgggc 618
           |||||||||| |||||
Sbjct: 293 agaagttctattgggc 308

---

>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase
          Length = 2031

 Score =  141 bits (71), Expect = 3e-30
 Identities = 394/499 (78%), Gaps = 2/499 (0%)
 Strand = Plus / Plus

                                                                        
Query: 141  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 200
            |||||| ||||||| || ||||| ||| | || |||||  ||||| | |||||||| || 
Sbjct: 522  aacttcttgaccctcccgaacattaaggttcctctcattctgggtgtttggggaggtaaa 581

                                                                        
Query: 201  ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 260
            ||||||||||| || ||||||||||| ||||| || || |||||||| |||||||| || 
Sbjct: 582  ggtcaaggaaagtctttccagtgtgaacttgtatttgctaagatgggaatcaaccctatt 641

                                                                        
Query: 261  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 320
            ||||||||||| || ||  | || |||||||| || ||||||||||| ||  | ||||||
Sbjct: 642  atgatgagtgctggggaattagaaagtgggaatgcaggagagccagcaaaattgatcagg 701

                                                                        
Query: 321  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 380
            ||  | ||| | ||||| || || || |||||||| || || ||||| || || || |||
Sbjct: 702  caaagatacagagaggcagctgatatcatcaagaaagggaaaatgtgttgtctatttatc 761

                                                                        
Query: 381  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 440
            ||||||||||| ||||| || || ||| | || || || || |||||||| || || |||
Sbjct: 762  aacgatcttgatgctggagctggaaggcttggtgggactacccagtacacagtgaataac 821

                                                                        
Query: 441  cagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccc 500
            |||||||| || || || || |||||||| || ||    |||| |||| |||||||| ||
Sbjct: 822  cagatggtaaatgctactcttatgaacattgctga-caacccaaccaatgtgcagctacc 880

                                                                        
Query: 501  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 560
             |||||||| |||||||| || || ||| | || |||||| | || || |||||||| ||
Sbjct: 881  aggcatgtataacaaggaagaaaatcccagagttcccatcatagtaactggtaacgactt 940

                                                                        
Query: 561  ctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctc 620
            ||| ||| | || || ||||| || ||||||||||| || ||| || |||||||||||||
Sbjct: 941  ctcaacgttatatgcacctctcattcgtgatggtcggat-ggataaattctactgggctc 999

                               
Query: 621  ccacccgtgacgaccgtat 639
            | || ||||| || |||||
Sbjct: 1000 caactcgtgaagatcgtat 1018

---

>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase
           activase (Rca) gene, partial sequence
          Length = 648

 Score =  137 bits (69), Expect = 5e-29
 Identities = 179/213 (84%), Gaps = 2/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 427 acaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccc 486
           |||| ||||||||||||||||| ||||||||||| |||||||| || ||   ||| ||| 
Sbjct: 1   acactgtcaacaaccagatggttaacgccaccctcatgaacattgctgacaacccaacc- 59

                                                                       
Query: 487 aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 546
           || || ||||||||||| |||||||||||| |||| ||  | ||||| |||||| |||| 
Sbjct: 60  aatgtccagctccctggtatgtacaacaagcaggacaatgctcgtgtacccatcatcgtt 119

                                                                       
Query: 547 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaa 606
           || |||||||| ||||| ||  | || |||||||| ||||||||||||||||| ||||||
Sbjct: 120 actggtaacgacttctctaccttgtatgctcctctcatccgtgatggtcgtat-ggagaa 178

                                            
Query: 607 gttctactgggctcccacccgtgacgaccgtat 639
            ||||||||||| ||||| ||||| ||||||||
Sbjct: 179 attctactgggcacccactcgtgaggaccgtat 211

---

>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
           activase mRNA, complete cds
          Length = 1693

 Score =  133 bits (67), Expect = 8e-28
 Identities = 225/275 (81%), Gaps = 2/275 (0%)
 Strand = Plus / Plus

                                                                       
Query: 342 gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 401
           ||||| |||||||||||    |||||||  || |||||||||||||| ||||| ||||| 
Sbjct: 612 gacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgccggtgcc 671

                                                                       
Query: 402 ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 461
           ||  | |||||||  ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 672 ggccgcatgggcgacaccacccagtacaccgtgaacaaccagatggtgaacgccaccctg 731

                                                                       
Query: 462 atgaacatcgccgatgcccccacccaacgtgcagctccctggcatgtacaacaaggagga 521
           ||||||||||||||   ||| | ||||||| ||||| || ||  ||||||| || |||||
Sbjct: 732 atgaacatcgccgacaacccga-ccaacgtccagctgcccggtgtgtacaagaacgagga 790

                                                                       
Query: 522 gaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctct 581
           || ||| || |||||||| ||   ||| || ||||| ||||| || || ||||| || ||
Sbjct: 791 gatccctcgcgtgcccattgtgtgcacgggcaacgacttctccaccctgtacgcgcccct 850

                                              
Query: 582 gatccgtgatggtcgtatgggagaagttctactgg 616
           |||||| ||||| || || |||||||| |||||||
Sbjct: 851 gatccgcgatggccgcat-ggagaagtactactgg 884



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                       
Query: 136 ccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggag 195
           |||| |||||||||  ||||||||| |||||| | || |||||  ||||||||||||| |
Sbjct: 406 ccaagaacttcatggacctgcccaagatcaaggtgcccctcattctgggtatctggggtg 465

                  
Query: 196 gcaaggg 202
           |||||||
Sbjct: 466 gcaaggg 472

---

>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score =  123 bits (62), Expect = 8e-25
 Identities = 116/134 (86%)
 Strand = Plus / Plus

                                                                        
Query: 342  gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 401
            ||||| |||||||||||    |||||||  || |||||||||||||| ||||| ||||| 
Sbjct: 1824 gacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgccggtgcc 1883

                                                                        
Query: 402  ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 461
            ||  | |||||||  ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 1884 ggccgcatgggcgacaccacccagtacaccgtgaacaaccagatggtgaacgccaccctg 1943

                          
Query: 462  atgaacatcgccga 475
            ||||||||||||||
Sbjct: 1944 atgaacatcgccga 1957



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                               
Query: 152  cctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 202
            ||||||||| |||||| | || |||||  ||||||||||||| ||||||||
Sbjct: 1634 cctgcccaagatcaaggtgcccctcattctgggtatctggggtggcaaggg 1684

---

>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score =  113 bits (57), Expect = 7e-22
 Identities = 296/373 (79%), Gaps = 2/373 (0%)
 Strand = Plus / Minus

                                                                        
Query: 261  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 320
            |||||||||||||||||  |||| ||||| || || |||||||| || ||| | || |||
Sbjct: 7262 atgatgagtgccggagaattggaaagtggaaatgcaggagagcctgcaaagttgattagg 7203

                                                                        
Query: 321  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 380
            ||  |||||||||||||  | ||||| ||||  || || ||||||||||| |||||||||
Sbjct: 7202 caaaggtaccgtgaggcgtccgacattatcagaaaaggaaagatgtgctgtctcttcatc 7143

                                                                        
Query: 381  aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 440
            || |||||||| || || || ||||| ||||| || || || || ||||| |||||||||
Sbjct: 7142 aatgatcttgatgcaggagctggtagaatgggtggcactactcaatacacagtcaacaac 7083

                                                                        
Query: 441  cagatggtgaacgccaccctgatgaacatcgccgatgcccccacccaacgtgcagctccc 500
            |||||||| || || ||||| |||||||| || ||   ||| ||| || || || || ||
Sbjct: 7082 cagatggtaaatgcaaccctcatgaacattgctgacaaccctacc-aatgttcaacttcc 7024

                                                                        
Query: 501  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 560
             || ||||||||||| || |||||  |||| || || ||| ||||||| || || || ||
Sbjct: 7023 cggtatgtacaacaaagaagagaatgcccgcgtccctatcatcgtcactggcaatgactt 6964

                                                                        
Query: 561  ctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctc 620
            ||| ||| | || |||||| | || |||||||| ||||| ||| || ||||||||||| |
Sbjct: 6963 ctctacgttgtatgctcctttaattcgtgatggacgtat-ggaaaaattctactgggcac 6905

                         
Query: 621  ccacccgtgacga 633
            | || ||||||||
Sbjct: 6904 ctactcgtgacga 6892



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                        
Query: 165  aagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgt 224
            ||||| || ||||| ||||| || ||||||||||| ||||||||||| ||||| || |||
Sbjct: 7541 aagattcctctcatattgggcatttggggaggcaaaggtcaaggaaagtcatttcaatgt 7482

                                        
Query: 225  gagcttgtgttcgccaagatgggcatca 252
            |||||||| || ||||||||||| ||||
Sbjct: 7481 gagcttgtatttgccaagatgggaatca 7454

---

>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence
          Length = 253

 Score =  105 bits (53), Expect = 2e-19
 Identities = 114/133 (85%), Gaps = 1/133 (0%)
 Strand = Plus / Plus

                                                                       
Query: 507 gtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgac 566
           ||||||||| || |||||||||||||||||| || | ||||||||||| |||||||| ||
Sbjct: 1   gtacaacaaagaagagaacccccgtgtgcccgtcattgtcaccggtaatgatttctccac 60

                                                                       
Query: 567 gctctacgctcctctgatccgtgatggtcgtatgggagaagttctactgggctcccaccc 626
             | || ||||| || ||||||||||||||||| |||||| ||||||||||| || ||||
Sbjct: 61  cttgtatgctccccttatccgtgatggtcgtat-ggagaaattctactgggcaccaaccc 119

                        
Query: 627 gtgacgaccgtat 639
           | ||||| |||||
Sbjct: 120 gcgacgatcgtat 132

---

>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 176/217 (81%), Gaps = 2/217 (0%)
 Strand = Plus / Plus

                                                                       
Query: 402 ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 461
           ||||| ||||| ||||| || || ||||| ||||||||||| |||||||| ||||| || 
Sbjct: 8   ggtagaatgggtggaactacccaatacactgtcaacaaccaaatggtgaatgccactctc 67

                                                                       
Query: 462 atgaacatcgccgatgcccccacccaacgtgcagctccctggcatgtacaacaaggagga 521
           |||||||| || ||   ||| ||  || || |||||||| || |||||||||||| | ||
Sbjct: 68  atgaacattgctgacaacccgaca-aatgtccagctccccggtatgtacaacaagcaaga 126

                                                                       
Query: 522 gaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctct 581
           |||  || | || || ||  ||||||| |||||||||||||| ||  | || ||||| ||
Sbjct: 127 gaatgccagggtccctattatcgtcactggtaacgatttctccacattgtatgctccact 186

                                                
Query: 582 gatccgtgatggtcgtatgggagaagttctactgggc 618
            ||||||||||||||||| ||||||||||||||||||
Sbjct: 187 tatccgtgatggtcgtat-ggagaagttctactgggc 222

---

>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence
          Length = 105218

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                          
Query: 183    ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 242
              |||||||||||||| || |||||||||||||| |||||   ||||||||| || ||||||
Sbjct: 104933 ggtatctggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaag 104874

                         
Query: 243    atgggcatcaa 253
              |||||||||||
Sbjct: 104873 atgggcatcaa 104863



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                          
Query: 363    atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 422
              ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || 
Sbjct: 104078 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 104019

                                                             
Query: 423    cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 469
              |||||||| || ||||| || ||||| || || || || ||||||||
Sbjct: 104018 cagtacacagtgaacaatcaaatggtaaatgcaacacttatgaacat 103972



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                
Query: 258    atcatgatgagtgccggagagctggagagtgggaacgctggagagccagc 307
              |||||||||||||| |||||||| || ||||| || || ||||| |||||
Sbjct: 104183 atcatgatgagtgctggagagctagaaagtggaaatgcgggagaaccagc 104134

---

>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence
          Length = 163160

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                         
Query: 183   ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 242
             |||||||||||||| || |||||||||||||| |||||   ||||||||| || ||||||
Sbjct: 83958 ggtatctggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaag 83899

                        
Query: 243   atgggcatcaa 253
             |||||||||||
Sbjct: 83898 atgggcatcaa 83888



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 72    gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgt 127
             |||||||||||||  || || ||||| || |||||||| |||||||||||||||||
Sbjct: 84295 gacaacaccatggatggtttttacattgcacctgcttttatggacaagcttgttgt 84240



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                         
Query: 363   atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 422
             ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || 
Sbjct: 83103 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 83044

                                                            
Query: 423   cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 469
             |||||||| || ||||| || ||||| || || || || ||||||||
Sbjct: 83043 cagtacacagtgaacaatcaaatggtaaatgcaacacttatgaacat 82997



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 258   atcatgatgagtgccggagagctggagagtgggaacgctggagagccagc 307
             |||||||||||||| |||||||| || ||||| || || ||||| |||||
Sbjct: 83208 atcatgatgagtgctggagagctagaaagtggaaatgcgggagaaccagc 83159

---

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 67/75 (89%), Gaps = 1/75 (1%)
 Strand = Plus / Minus

                                                                          
Query: 423    cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 482
              |||||||||||||||| |||  |||||| ||||||||||||||||||||||||   ||||
Sbjct: 445720 cagtacaccgtcaacacccaactggtgagcgccaccctgatgaacatcgccgacaacccc 445661

                             
Query: 483    acccaacgtgcagct 497
              | |||||||||||||
Sbjct: 445660 a-ccaacgtgcagct 445647

---

>gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic sequence
          Length = 262

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Plus

                                                                       
Query: 354 aagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggc 413
           ||||| ||||||||   |||||||||||| |||||||| || || || |||||  | || 
Sbjct: 19  aaggggaagatgtgtgtcctcttcatcaatgatcttgatgcaggggctggtagacttggt 78

                                                                   
Query: 414 ggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 469
           ||||| || || || || ||||| |||||||||||||| || ||||| ||||||||
Sbjct: 79  ggaactacacaatatacagtcaataaccagatggtgaatgcaacccttatgaacat 134

---

>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete
           cds
          Length = 1437

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 61/73 (83%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 544 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggga 603
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | || |||
Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaat-gga 957

                        
Query: 604 gaagttctactgg 616
           |||||||||||||
Sbjct: 958 gaagttctactgg 970

---

>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1299

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 61/73 (83%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 544 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggga 603
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | || |||
Sbjct: 865 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaat-gga 923

                        
Query: 604 gaagttctactgg 616
           |||||||||||||
Sbjct: 924 gaagttctactgg 936

---

>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1437

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 61/73 (83%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 544 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggga 603
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | || |||
Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaat-gga 957

                        
Query: 604 gaagttctactgg 616
           |||||||||||||
Sbjct: 958 gaagttctactgg 970

---

>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS85ZG11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1496

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 61/73 (83%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 544 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggga 603
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | || |||
Sbjct: 873 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaat-gga 931

                        
Query: 604 gaagttctactgg 616
           |||||||||||||
Sbjct: 932 gaagttctactgg 944

---

>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete
           cds, clone: RAFL21-28-D21
          Length = 1447

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 61/73 (83%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 544 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggga 603
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | || |||
Sbjct: 886 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaat-gga 944

                        
Query: 604 gaagttctactgg 616
           |||||||||||||
Sbjct: 945 gaagttctactgg 957

---

>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete
             sequence
          Length = 116944

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 61/73 (83%), Gaps = 1/73 (1%)
 Strand = Plus / Minus

                                                                         
Query: 544   gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggga 603
             ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | || |||
Sbjct: 97686 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaat-gga 97628

                          
Query: 604   gaagttctactgg 616
             |||||||||||||
Sbjct: 97627 gaagttctactgg 97615

---

>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 151     ccctgcccaacatcaagatc 170
               ||||||||||||||||||||
Sbjct: 1130357 ccctgcccaacatcaagatc 1130376

---

>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete
             sequence
          Length = 101284

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   ttccagtgtgagcttgtgtt 235
             ||||||||||||||||||||
Sbjct: 97287 ttccagtgtgagcttgtgtt 97268

---

>gb|AC115709.11| Mus musculus chromosome 12, clone RP23-76M3, complete sequence
          Length = 193170

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 87     ggcttctacatcgctcctgctttc 110
              ||||||| ||||||||||||||||
Sbjct: 147044 ggcttctgcatcgctcctgctttc 147067

---

>gb|AC108471.3| Homo sapiens BAC clone RP11-539G18 from 4, complete sequence
          Length = 141442

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   gtccatctctccaaaaactt 145
             ||||||||||||||||||||
Sbjct: 63248 gtccatctctccaaaaactt 63229

---

>ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2739

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 460  tgatgaacatcgccgatgcc 479
            ||||||||||||||||||||
Sbjct: 1896 tgatgaacatcgccgatgcc 1877

---

>ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 460  tgatgaacatcgccgatgcc 479
            ||||||||||||||||||||
Sbjct: 1897 tgatgaacatcgccgatgcc 1878

---

>gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence
          Length = 42802

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 460   tgatgaacatcgccgatgcc 479
             ||||||||||||||||||||
Sbjct: 34318 tgatgaacatcgccgatgcc 34337

---

>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB33ZF10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1426

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 54/64 (84%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                       
Query: 553 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgggagaagttcta 612
           ||||||||||| || || || ||||| ||||||||||| ||  | || ||||||||||||
Sbjct: 936 aacgatttctctacactgtatgctccactgatccgtgaaggaagaat-ggagaagttcta 994

               
Query: 613 ctgg 616
           ||||
Sbjct: 995 ctgg 998

---

>gb|AE009524.1| Brucella melitensis 16M chromosome I, section 81 of 195 of the
            complete sequence
          Length = 10900

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  ccctgcccaacatcaagatc 170
            ||||||||||||||||||||
Sbjct: 7760 ccctgcccaacatcaagatc 7741

---

>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 151     ccctgcccaacatcaagatc 170
               ||||||||||||||||||||
Sbjct: 1147720 ccctgcccaacatcaagatc 1147739

---

>ref|XM_312558.2| Anopheles gambiae str. PEST ENSANGP00000014302
           (ENSANGG00000011813), partial mRNA
          Length = 1773

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 tcgccaagatgggcatcaac 254
           ||||||||||||||||||||
Sbjct: 641 tcgccaagatgggcatcaac 660

---

>emb|CR974583.24| Mouse DNA sequence from clone RP23-118G7 on chromosome 12, complete
              sequence
          Length = 219072

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 87     ggcttctacatcgctcctgctttc 110
              ||||||| ||||||||||||||||
Sbjct: 141825 ggcttctgcatcgctcctgctttc 141848

---

>gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein precursor (APL-1) mRNA
            complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 460  tgatgaacatcgccgatgcc 479
            ||||||||||||||||||||
Sbjct: 1882 tgatgaacatcgccgatgcc 1863

---

>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain
               2308
          Length = 2121359

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 151     ccctgcccaacatcaagatc 170
               ||||||||||||||||||||
Sbjct: 1144872 ccctgcccaacatcaagatc 1144891

---

>gb|U51683.1|BAU51683 Brucella abortus phosphatidate cytidyltransferase (cdsA), group 1
            outer membrane protein (omp1), LpxD (lpxD), FabZ (fabZ),
            and LpxA (lpxA) genes, complete cds
          Length = 8895

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  ccctgcccaacatcaagatc 170
            ||||||||||||||||||||
Sbjct: 8238 ccctgcccaacatcaagatc 8219

---

>emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chromosome 4, complete
             sequence
          Length = 208153

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   tggagagtgggaacgctgga 299
             ||||||||||||||||||||
Sbjct: 90247 tggagagtgggaacgctgga 90228


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,723,250
Number of Sequences: 3902068
Number of extensions: 4723250
Number of successful extensions: 91005
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 90495
Number of HSP's gapped (non-prelim): 328
length of query: 639
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 616
effective length of database: 17,143,297,704
effective search space: 10560271385664
effective search space used: 10560271385664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---