| Clone Name | basd1j22 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ495779.1|HVU495779 Hordeum vulgare partial mRNA for putative protein kinase Length = 1100 Score = 870 bits (439), Expect = 0.0 Identities = 451/455 (99%) Strand = Plus / Plus Query: 2 gatggatgttgcatttggtatggaatatttgcacgggaagaatattgtgcacttcgattt 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 gatggatgttgcatttggtatggaatatttgcacgggaagaatattgtgcacttcgattt 369 Query: 62 gaagagtgataatctgctcgtcaacctaagagatccccaacgccctatatgcaaggtcgg 121 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 gaagagtaataatctgctcgtcaacctaagagatccccaacgccctatatgcaaggtcgg 429 Query: 122 cgatttgggtttatcaaaggttaaatgccagacactgatctctggtggagtgcgagggac 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 cgatttgggtttatcaaaggttaaatgccagacactgatctctggtggagtgcgagggac 489 Query: 182 acttccctggatggcccctgagctgttaaatggcagcagtaaccttgtttctgaaaaggt 241 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 490 acttcccctgatggcacctgagctgttaaatggcagcagtaaccttgtttctgaaaaggt 549 Query: 242 cgacgtcttctcatttggaatcgtgatgtgggagctgcttaccggtgaagagccttacgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 550 cgacgtcttctcatttggaatcgtgatgtgggagctgcttaccggtgaagagccttacgc 609 Query: 302 tgacctgcattacggcgccatcataggtgggatcgtgaacaacaccttacggcctctggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 610 tgacctgcattacggcgccatcataggtgggatcgtgaacaacaccttacggcctctggt 669 Query: 362 gcccgagtcgtgcgaccctcagtggagatcgctgatggagcagtgctggtcagccgagcc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 670 gcccgagtcgtgcgaccctcagtggagatcgctgatggagcagtgctggtcagccgagcc 729 Query: 422 gacggagcggccgagcttcacggaggtcgtcaaga 456 ||||||||||||||||||||||||||||||||||| Sbjct: 730 gacggagcggccgagcttcacggaggtcgtcaaga 764
>dbj|AK067771.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013117A13, full insert sequence Length = 1701 Score = 361 bits (182), Expect = 1e-96 Identities = 353/410 (86%) Strand = Plus / Plus Query: 3 atggatgttgcatttggtatggaatatttgcacgggaagaatattgtgcacttcgatttg 62 ||||||||||| ||||||||||| |||||||| | |||||| ||||| ||||| || | Sbjct: 974 atggatgttgcgtttggtatggagtatttgcatgagaagaacattgtacactttgaccta 1033 Query: 63 aagagtgataatctgctcgtcaacctaagagatccccaacgccctatatgcaaggtcggc 122 ||||||||||||||||| ||||| ||||||||||| || | ||||||||||||||| || Sbjct: 1034 aagagtgataatctgcttgtcaatctaagagatcctcagcaccctatatgcaaggttggt 1093 Query: 123 gatttgggtttatcaaaggttaaatgccagacactgatctctggtggagtgcgagggaca 182 |||||||| || || || |||||||||||||| || || |||||||| |||||||| ||| Sbjct: 1094 gatttgggcttgtcgaaagttaaatgccagacgctaatatctggtggggtgcgaggaaca 1153 Query: 183 cttccctggatggcccctgagctgttaaatggcagcagtaaccttgtttctgaaaaggtc 242 ||||| ||||||||||| |||||||| ||||| ||||| | ||||||||||||||||||| Sbjct: 1154 cttccttggatggccccggagctgttgaatggaagcagcagccttgtttctgaaaaggtc 1213 Query: 243 gacgtcttctcatttggaatcgtgatgtgggagctgcttaccggtgaagagccttacgct 302 || || ||||| || ||||| || |||||||||||||| || |||||||||||||| || Sbjct: 1214 gatgttttctccttcggaattgtaatgtgggagctgctcactggtgaagagccttatgcc 1273 Query: 303 gacctgcattacggcgccatcataggtgggatcgtgaacaacaccttacggcctctggtg 362 || ||||||| |||||||||||||| ||||| || ||||||||| | || |||| |||| Sbjct: 1274 gaattgcattatggcgccatcataggcgggattgtaaacaacaccctgcgccctccggtg 1333 Query: 363 cccgagtcgtgcgaccctcagtggagatcgctgatggagcagtgctggtc 412 |||||||| |||||||||| |||||| || ||||||||||| |||||||| Sbjct: 1334 cccgagtcatgcgaccctcggtggaggtcactgatggagcaatgctggtc 1383
>ref|XM_476333.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3813 Score = 341 bits (172), Expect = 1e-90 Identities = 351/410 (85%), Gaps = 3/410 (0%) Strand = Plus / Plus Query: 3 atggatgttgcatttggtatggaatatttgcacgggaagaatattgtgcacttcgatttg 62 ||||||||||| ||||||||||| |||||||| | |||||| ||||| ||||| || | Sbjct: 3313 atggatgttgcgtttggtatggagtatttgcatgagaagaacattgtacactttgaccta 3372 Query: 63 aagagtgataatctgctcgtcaacctaagagatccccaacgccctatatgcaaggtcggc 122 ||||||||||||||||| ||||| ||||||||||| || | ||||||||||||||| || Sbjct: 3373 aagagtgataatctgcttgtcaatctaagagatcctcagcaccctatatgcaaggttggt 3432 Query: 123 gatttgggtttatcaaaggttaaatgccagacactgatctctggtggagtgcgagggaca 182 |||||||| || || || |||||||||||||| || || |||||||| |||||||| ||| Sbjct: 3433 gatttgggcttgtcgaaagttaaatgccagacgctaatatctggtggggtgcgaggaaca 3492 Query: 183 cttccctggatggcccctgagctgttaaatggcagcagtaaccttgtttctgaaaaggtc 242 ||||| ||||||||||| |||||||| ||||| ||||| | ||||||||||||||||||| Sbjct: 3493 cttccttggatggccccggagctgttgaatggaagcagcagccttgtttctgaaaaggtc 3552 Query: 243 gacgtcttctcatttggaatcgtgatgtgggagctgcttaccggtgaagagccttacgct 302 || || ||||| || ||||| || |||||||||||||| || |||||||||||||| || Sbjct: 3553 gatgttttctccttcggaattgtaatgtgggagctgctcactggtgaagagccttatgcc 3612 Query: 303 gacctgcattacggcgccatcataggtgggatcgtgaacaacaccttacggcctctggtg 362 || ||||||| |||||||||||| ||||| || ||||||||| | || |||| |||| Sbjct: 3613 gaattgcattatggcgccatcata---gggattgtaaacaacaccctgcgccctccggtg 3669 Query: 363 cccgagtcgtgcgaccctcagtggagatcgctgatggagcagtgctggtc 412 |||||||| |||||||||| |||||| || ||||||||||| |||||||| Sbjct: 3670 cccgagtcatgcgaccctcggtggaggtcactgatggagcaatgctggtc 3719
>ref|NM_114559.1| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT3G46920 mRNA, complete cds Length = 3516 Score = 139 bits (70), Expect = 9e-30 Identities = 259/322 (80%) Strand = Plus / Plus Query: 10 ttgcatttggtatggaatatttgcacgggaagaatattgtgcacttcgatttgaagagtg 69 |||| ||||| ||||| |||||||| || ||||| || || ||||| ||| | || |||| Sbjct: 3002 ttgcttttgggatggagtatttgcatggaaagaagatagtacactttgatcttaaaagtg 3061 Query: 70 ataatctgctcgtcaacctaagagatccccaacgccctatatgcaaggtcggcgatttgg 129 | || ||||||||||| || || ||||| || ||||| || |||||||| || ||||||| Sbjct: 3062 acaacctgctcgtcaatctcagggatcctcatcgcccaatttgcaaggttggggatttgg 3121 Query: 130 gtttatcaaaggttaaatgccagacactgatctctggtggagtgcgagggacacttccct 189 || | |||||||| ||||| |||||| | || || ||||| || || || |||||||| | Sbjct: 3122 gtctctcaaaggtgaaatgtcagacattaatatcaggtggtgttcggggaacacttccat 3181 Query: 190 ggatggcccctgagctgttaaatggcagcagtaaccttgtttctgaaaaggtcgacgtct 249 ||||||| || ||||| ||||||| | ||||| |||||||||||| |||||||| || | Sbjct: 3182 ggatggcacccgagcttctaaatggaaccagtagccttgtttctgagaaggtcgatgtgt 3241 Query: 250 tctcatttggaatcgtgatgtgggagctgcttaccggtgaagagccttacgctgacctgc 309 | ||||| ||||| || | ||||| || | ||||||||||| |||||||| ||| ||| Sbjct: 3242 tttcattcggaattgtcctctgggaacttttcaccggtgaagaaccttacgccgacttgc 3301 Query: 310 attacggcgccatcataggtgg 331 | || || || ||||||||||| Sbjct: 3302 actatggagcgatcataggtgg 3323
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 117 bits (59), Expect = 3e-23 Identities = 104/119 (87%) Strand = Plus / Plus Query: 123 gatttgggtttatcaaaggttaaatgccagacactgatctctggtggagtgcgagggaca 182 |||||||| || || || |||||||||||||| || || |||||||| |||||||| ||| Sbjct: 4023536 gatttgggcttgtcgaaagttaaatgccagacgctaatatctggtggggtgcgaggaaca 4023595 Query: 183 cttccctggatggcccctgagctgttaaatggcagcagtaaccttgtttctgaaaaggt 241 ||||| ||||||||||| |||||||| ||||| ||||| | |||||||||||||||||| Sbjct: 4023596 cttccttggatggccccggagctgttgaatggaagcagcagccttgtttctgaaaaggt 4023654 Score = 111 bits (56), Expect = 2e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 3 atggatgttgcatttggtatggaatatttgcacgggaagaatattgtgcacttcgatttg 62 ||||||||||| ||||||||||| |||||||| | |||||| ||||| ||||| || | Sbjct: 4023024 atggatgttgcgtttggtatggagtatttgcatgagaagaacattgtacactttgaccta 4023083 Query: 63 aagagtgataatctgctcgtcaacctaagagatccccaacgccctatatgcaaggt 118 ||||||||||||||||| ||||| ||||||||||| || | ||||||||||||||| Sbjct: 4023084 aagagtgataatctgcttgtcaatctaagagatcctcagcaccctatatgcaaggt 4023139 Score = 79.8 bits (40), Expect = 7e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 238 aggtcgacgtcttctcatttggaatcgtgatgtgggagctgcttaccggtgaagagcctt 297 ||||||| || ||||| || ||||| || |||||||||||||| || ||||||||||||| Sbjct: 4023772 aggtcgatgttttctccttcggaattgtaatgtgggagctgctcactggtgaagagcctt 4023831 Query: 298 acgctgacctgcattacggcgccatcataggt 329 | || || ||||||| ||||||||||||||| Sbjct: 4023832 atgccgaattgcattatggcgccatcataggt 4023863 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 330 gggatcgtgaacaacaccttacggcctctggtgcccgagtcgtgcgaccctcagtggaga 389 ||||| || ||||||||| | || |||| |||||||||||| |||||||||| |||||| Sbjct: 4023953 gggattgtaaacaacaccctgcgccctccggtgcccgagtcatgcgaccctcggtggagg 4024012 Query: 390 tcgctgatggagcagtgctggtc 412 || ||||||||||| |||||||| Sbjct: 4024013 tcactgatggagcaatgctggtc 4024035 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 135 tcaaaggttaaatgccagacactgatctctggtggagtgcgagggacacttccctggatg 194 ||||| || ||||| ||||| || ||||||||||| ||| | ||||| ||||| |||||| Sbjct: 26020366 tcaaaagtaaaatgtcagaccctcatctctggtggtgtgagggggactcttccatggatg 26020425 Query: 195 gc 196 || Sbjct: 26020426 gc 26020427
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0019L07 Length = 131650 Score = 117 bits (59), Expect = 3e-23 Identities = 104/119 (87%) Strand = Plus / Plus Query: 123 gatttgggtttatcaaaggttaaatgccagacactgatctctggtggagtgcgagggaca 182 |||||||| || || || |||||||||||||| || || |||||||| |||||||| ||| Sbjct: 67191 gatttgggcttgtcgaaagttaaatgccagacgctaatatctggtggggtgcgaggaaca 67250 Query: 183 cttccctggatggcccctgagctgttaaatggcagcagtaaccttgtttctgaaaaggt 241 ||||| ||||||||||| |||||||| ||||| ||||| | |||||||||||||||||| Sbjct: 67251 cttccttggatggccccggagctgttgaatggaagcagcagccttgtttctgaaaaggt 67309 Score = 111 bits (56), Expect = 2e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 3 atggatgttgcatttggtatggaatatttgcacgggaagaatattgtgcacttcgatttg 62 ||||||||||| ||||||||||| |||||||| | |||||| ||||| ||||| || | Sbjct: 66679 atggatgttgcgtttggtatggagtatttgcatgagaagaacattgtacactttgaccta 66738 Query: 63 aagagtgataatctgctcgtcaacctaagagatccccaacgccctatatgcaaggt 118 ||||||||||||||||| ||||| ||||||||||| || | ||||||||||||||| Sbjct: 66739 aagagtgataatctgcttgtcaatctaagagatcctcagcaccctatatgcaaggt 66794 Score = 79.8 bits (40), Expect = 7e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 238 aggtcgacgtcttctcatttggaatcgtgatgtgggagctgcttaccggtgaagagcctt 297 ||||||| || ||||| || ||||| || |||||||||||||| || ||||||||||||| Sbjct: 67427 aggtcgatgttttctccttcggaattgtaatgtgggagctgctcactggtgaagagcctt 67486 Query: 298 acgctgacctgcattacggcgccatcataggt 329 | || || ||||||| ||||||||||||||| Sbjct: 67487 atgccgaattgcattatggcgccatcataggt 67518 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 330 gggatcgtgaacaacaccttacggcctctggtgcccgagtcgtgcgaccctcagtggaga 389 ||||| || ||||||||| | || |||| |||||||||||| |||||||||| |||||| Sbjct: 67608 gggattgtaaacaacaccctgcgccctccggtgcccgagtcatgcgaccctcggtggagg 67667 Query: 390 tcgctgatggagcagtgctggtc 412 || ||||||||||| |||||||| Sbjct: 67668 tcactgatggagcaatgctggtc 67690
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0035I03 Length = 153749 Score = 117 bits (59), Expect = 3e-23 Identities = 104/119 (87%) Strand = Plus / Plus Query: 123 gatttgggtttatcaaaggttaaatgccagacactgatctctggtggagtgcgagggaca 182 |||||||| || || || |||||||||||||| || || |||||||| |||||||| ||| Sbjct: 129412 gatttgggcttgtcgaaagttaaatgccagacgctaatatctggtggggtgcgaggaaca 129471 Query: 183 cttccctggatggcccctgagctgttaaatggcagcagtaaccttgtttctgaaaaggt 241 ||||| ||||||||||| |||||||| ||||| ||||| | |||||||||||||||||| Sbjct: 129472 cttccttggatggccccggagctgttgaatggaagcagcagccttgtttctgaaaaggt 129530 Score = 111 bits (56), Expect = 2e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 3 atggatgttgcatttggtatggaatatttgcacgggaagaatattgtgcacttcgatttg 62 ||||||||||| ||||||||||| |||||||| | |||||| ||||| ||||| || | Sbjct: 128900 atggatgttgcgtttggtatggagtatttgcatgagaagaacattgtacactttgaccta 128959 Query: 63 aagagtgataatctgctcgtcaacctaagagatccccaacgccctatatgcaaggt 118 ||||||||||||||||| ||||| ||||||||||| || | ||||||||||||||| Sbjct: 128960 aagagtgataatctgcttgtcaatctaagagatcctcagcaccctatatgcaaggt 129015 Score = 79.8 bits (40), Expect = 7e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 238 aggtcgacgtcttctcatttggaatcgtgatgtgggagctgcttaccggtgaagagcctt 297 ||||||| || ||||| || ||||| || |||||||||||||| || ||||||||||||| Sbjct: 129648 aggtcgatgttttctccttcggaattgtaatgtgggagctgctcactggtgaagagcctt 129707 Query: 298 acgctgacctgcattacggcgccatcataggt 329 | || || ||||||| ||||||||||||||| Sbjct: 129708 atgccgaattgcattatggcgccatcataggt 129739 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 330 gggatcgtgaacaacaccttacggcctctggtgcccgagtcgtgcgaccctcagtggaga 389 ||||| || ||||||||| | || |||| |||||||||||| |||||||||| |||||| Sbjct: 129829 gggattgtaaacaacaccctgcgccctccggtgcccgagtcatgcgaccctcggtggagg 129888 Query: 390 tcgctgatggagcagtgctggtc 412 || ||||||||||| |||||||| Sbjct: 129889 tcactgatggagcaatgctggtc 129911
>ref|NM_125142.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT5G57610 mRNA, complete cds Length = 3413 Score = 95.6 bits (48), Expect = 1e-16 Identities = 111/132 (84%) Strand = Plus / Plus Query: 11 tgcatttggtatggaatatttgcacgggaagaatattgtgcacttcgatttgaagagtga 70 ||||||||| ||||| ||||||||||| ||||| ||||| || |||||||||||| |||| Sbjct: 2682 tgcatttgggatggagtatttgcacggaaagaacattgttcatttcgatttgaagtgtga 2741 Query: 71 taatctgctcgtcaacctaagagatccccaacgccctatatgcaaggtcggcgatttggg 130 ||||| || || ||| | |||||||| || || |||||||||||| | || |||||||| Sbjct: 2742 gaatcttcttgtgaacatgagagatcctcagcgtcctatatgcaagattggtgatttggg 2801 Query: 131 tttatcaaaggt 142 ||||| ||||| Sbjct: 2802 gttatcgaaggt 2813
>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2 Length = 83478 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 11 tgcatttggtatggaatatttgcacgggaagaatattgtgcacttcgatttgaagagtga 70 ||||||||| ||||| ||||||||||| ||||| ||||| || |||||||||||| |||| Sbjct: 59296 tgcatttgggatggagtatttgcacggaaagaacattgttcatttcgatttgaagtgtga 59355 Query: 71 taatctgctcgtcaacctaagagatccccaacgccctatatgcaaggt 118 ||||| || || ||| | |||||||| || || |||||||||||||| Sbjct: 59356 gaatcttcttgtgaacatgagagatcctcagcgtcctatatgcaaggt 59403
>gb|AY108770.1| Zea mays PCO069828 mRNA sequence Length = 1493 Score = 71.9 bits (36), Expect = 2e-09 Identities = 311/400 (77%), Gaps = 2/400 (0%) Strand = Plus / Plus Query: 15 tttggtatggaatatttgcacgggaagaatattgtgcacttcgatttgaagagtgataat 74 ||||| |||||||| ||||| | || || ||||||||||| || ||||| ||||| ||| Sbjct: 389 tttggaatggaatacttgcatagcaaaaacattgtgcactttgacttgaaaagtgacaat 448 Query: 75 ctgctcgtcaacctaagagatccccaacgccctatatgcaaggtcggcgat-ttgggttt 133 |||| || || |||| || || || || || ||||||||||| || ||| ||||| || Sbjct: 449 ttgcttgttaatttaagggaccctcagcgtccaatatgcaaggttggtgatcttgggctt 508 Query: 134 atcaaaggttaaatgccagacactgatctctggtggagtgcgagggacacttccctggat 193 ||||| || || || ||||| || |||||||| || || ||||| |||||||| ||||| Sbjct: 509 -tcaaaagtgaagtgtcagaccctcatctctggaggtgtccgaggaacacttccatggat 567 Query: 194 ggcccctgagctgttaaatggcagcagtaaccttgtttctgaaaaggtcgacgtcttctc 253 |||||| || || | ||||| ||||| | | | || || |||||||| || || ||||| Sbjct: 568 ggccccagaacttctgaatggtagcagcagcttggtctcagaaaaggttgatgtattctc 627 Query: 254 atttggaatcgtgatgtgggagctgcttaccggtgaagagccttacgctgacctgcatta 313 ||||| || || | ||||| ||||| || || |||||||| || || || | ||||| Sbjct: 628 ttttgggattgttctctgggaactgctaacaggagaagagccatatgcagatttacatta 687 Query: 314 cggcgccatcataggtgggatcgtgaacaacaccttacggcctctggtgcccgagtcgtg 373 || | || |||||||| || |||| |||||| ||||||| | |||||||| || || Sbjct: 688 tggtgttataataggtggcattgtgagcaacactctacggccgccagtgcccgactcctg 747 Query: 374 cgaccctcagtggagatcgctgatggagcagtgctggtca 413 |||||| ||||||| || ||||||||||| ||||||||| Sbjct: 748 cgaccccgagtggaggtcactgatggagcaatgctggtca 787
>emb|AL096859.2|ATT6H20 Arabidopsis thaliana DNA chromosome 3, BAC clone T6H20 Length = 98461 Score = 69.9 bits (35), Expect = 7e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 123 gatttgggtttatcaaaggttaaatgccagacactgatctctggtggagtgcgagggaca 182 ||||||||| | |||||||| ||||| |||||| | || || ||||| || || || ||| Sbjct: 13314 gatttgggtctctcaaaggtgaaatgtcagacattaatatcaggtggtgttcggggaaca 13373 Query: 183 cttccctggatggcccctgagctgttaaatggcagcagtaaccttgtttctgaaaaggt 241 ||||| |||||||| || ||||| ||||||| | ||||| |||||||||||| ||||| Sbjct: 13374 cttccatggatggcacccgagcttctaaatggaaccagtagccttgtttctgagaaggt 13432 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 10 ttgcatttggtatggaatatttgcacgggaagaatattgtgcacttcgatttgaagagtg 69 |||| ||||| ||||| |||||||| || ||||| || || ||||| ||| | || |||| Sbjct: 12857 ttgcttttgggatggagtatttgcatggaaagaagatagtacactttgatcttaaaagtg 12916 Query: 70 ataatctgctcgtcaacctaagagatccccaacgccctatatgcaaggtc 119 | || ||||||||||| || || ||||| || ||||| || ||||||||| Sbjct: 12917 acaacctgctcgtcaatctcagggatcctcatcgcccaatttgcaaggtc 12966 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 282 accggtgaagagccttacgctgacctgcattacggcgccatcataggtg 330 ||||||||||| |||||||| ||| |||| || || || |||||||||| Sbjct: 13565 accggtgaagaaccttacgccgacttgcactatggagcgatcataggtg 13613
>ref|NM_100350.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT1G04700 mRNA, complete cds Length = 3395 Score = 65.9 bits (33), Expect = 1e-07 Identities = 162/205 (79%) Strand = Plus / Plus Query: 160 tctctggtggagtgcgagggacacttccctggatggcccctgagctgttaaatggcagca 219 ||||||||||||| |||| || ||||| |||||||| || |||||| |||| || |||| Sbjct: 2786 tctctggtggagtaagaggaacccttccatggatggcaccagagctgctaaacggaagca 2845 Query: 220 gtaaccttgtttctgaaaaggtcgacgtcttctcatttggaatcgtgatgtgggagctgc 279 | || | || || || || ||||| || ||||||||||| ||||||||||||||| | Sbjct: 2846 gcaatcgggtctcagagaaagtcgatgttttctcatttggtatcgtgatgtgggagatct 2905 Query: 280 ttaccggtgaagagccttacgctgacctgcattacggcgccatcataggtgggatcgtga 339 | || || ||||| || || || | ||||||| ||| |||||||| ||||| || |||| Sbjct: 2906 tgacaggcgaagaaccctatgcgaatctgcattgcggtgccatcattggtggaattgtga 2965 Query: 340 acaacaccttacggcctctggtgcc 364 |||| || ||| | |||| |||||| Sbjct: 2966 acaatacgttaagacctccggtgcc 2990
>ref|XM_468165.1| Oryza sativa (japonica cultivar-group), mRNA Length = 570 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 3 atggatgttgcatttggtatggaatatttgcacgggaagaatat 46 ||||||| ||||||||| |||||||||||||| ||||||||||| Sbjct: 79 atggatgctgcatttggcatggaatatttgcatgggaagaatat 122 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 255 tttggaatcgtgatgtgggagctgcttaccggtgaaga 292 ||||| || |||||||||||||||||||| || ||||| Sbjct: 331 tttggtattgtgatgtgggagctgcttactggcgaaga 368
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 3 atggatgttgcatttggtatggaatatttgcacgggaagaatat 46 ||||||| ||||||||| |||||||||||||| ||||||||||| Sbjct: 33409147 atggatgctgcatttggcatggaatatttgcatgggaagaatat 33409190 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 255 tttggaatcgtgatgtgggagctgcttaccggtgaaga 292 ||||| || |||||||||||||||||||| || ||||| Sbjct: 33409603 tttggtattgtgatgtgggagctgcttactggcgaaga 33409640
>dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1316_E06 Length = 110197 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 3 atggatgttgcatttggtatggaatatttgcacgggaagaatat 46 ||||||| ||||||||| |||||||||||||| ||||||||||| Sbjct: 39766 atggatgctgcatttggcatggaatatttgcatgggaagaatat 39809 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 255 tttggaatcgtgatgtgggagctgcttaccggtgaaga 292 ||||| || |||||||||||||||||||| || ||||| Sbjct: 40222 tttggtattgtgatgtgggagctgcttactggcgaaga 40259
>gb|BT016656.1| Zea mays clone Contig489 mRNA sequence Length = 791 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 324 ataggtgggatcgtgaacaacaccttacggcctctggtgcccgagtcgtgcgaccctcag 383 |||||||| || |||| |||||| ||||||| | |||||||| || |||||||| || Sbjct: 151 ataggtggcattgtgagcaacactctacggccgccagtgcccgactcctgcgaccccgag 210 Query: 384 tggagatcgctgatggagcagtgctggtcagccgagccgacggagcggccgagcttcacg 443 ||||| || ||||||||||| ||||||||| | || || | |||||||| | |||||| Sbjct: 211 tggaggtcactgatggagcaatgctggtcaacagaaccatctgagcggccaaacttcaca 270 Query: 444 gaggtcg 450 ||||||| Sbjct: 271 gaggtcg 277
>gb|AY738149.1| Zea mays salt-inducible protein kinase mRNA, complete cds Length = 972 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 3 atggatgttgcatttggtatggaatatttgcacgggaagaatattgtgcacttcgatttg 62 ||||||| ||||||||| |||||||||||||| ||| ||||| |||||| | |||||| Sbjct: 469 atggatgctgcatttggcctggaatatttgcactcgaaaaatatcgtgcacgttgatttg 528 Query: 63 aagagtgataa 73 ||| ||||||| Sbjct: 529 aagtgtgataa 539
>ref|NM_101493.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT1G16270 mRNA, complete cds Length = 3667 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 3 atggatgttgcatttggtatggaatatttgcacgggaagaatattgtgcacttcgatttg 62 ||||||| ||| ||||| |||||||| ||||||| || || ||||| |||||||||||| Sbjct: 2920 atggatgctgcctttggaatggaatacttgcacgccaaaaacattgttcacttcgatttg 2979 Query: 63 aa 64 || Sbjct: 2980 aa 2981 Score = 46.1 bits (23), Expect = 0.100 Identities = 95/119 (79%) Strand = Plus / Plus Query: 228 gtttctgaaaaggtcgacgtcttctcatttggaatcgtgatgtgggagctgcttaccggt 287 ||||| || |||||||| |||||||| ||||| || || |||||||| | || ||||| Sbjct: 3145 gtttcagagaaggtcgatgtcttctcttttggtatagtcttgtgggagattctaaccggc 3204 Query: 288 gaagagccttacgctgacctgcattacggcgccatcataggtgggatcgtgaacaacac 346 || || || || ||| | |||| ||||| || || ||||||||||| ||||||||||| Sbjct: 3205 gaggaaccatatgctaatatgcactacggtgctataataggtgggatagtgaacaacac 3263
>ref|NM_129057.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT2G35050 mRNA, complete cds Length = 4013 Score = 52.0 bits (26), Expect = 0.002 Identities = 101/126 (80%) Strand = Plus / Plus Query: 15 tttggtatggaatatttgcacgggaagaatattgtgcacttcgatttgaagagtgataat 74 ||||| ||||||||||||||| |||| || ||||| |||||||||||| ||||||| Sbjct: 3262 tttgggatggaatatttgcactcaaagagcatagtgcatttcgatttgaagtgtgataac 3321 Query: 75 ctgctcgtcaacctaagagatccccaacgccctatatgcaaggtcggcgatttgggttta 134 |||| |||||| ||| |||||| || || ||||||||||| || ||||| ||| | Sbjct: 3322 ttgcttgtcaacttaaaggatcccgcccgtcccatatgcaaggttggtgattttggtctg 3381 Query: 135 tcaaag 140 |||||| Sbjct: 3382 tcaaag 3387
>gb|AC006341.2|F3O9 Arabidopsis thaliana chromosome 1 BAC F3O9 sequence, complete sequence Length = 114498 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 3 atggatgttgcatttggtatggaatatttgcacgggaagaatattgtgcacttcgatttg 62 ||||||| ||| ||||| |||||||| ||||||| || || ||||| |||||||||||| Sbjct: 22305 atggatgctgcctttggaatggaatacttgcacgccaaaaacattgttcacttcgatttg 22364 Query: 63 aa 64 || Sbjct: 22365 aa 22366
>gb|AC002376.1|T1G11 Sequence of BAC T1G11 from Arabidopsis thaliana chromosome 1, complete sequence Length = 100079 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 238 aggtcgacgtcttctcatttggaatcgtgatgtgggag 275 ||||||| || ||||||||||| ||||||||||||||| Sbjct: 12798 aggtcgatgttttctcatttggtatcgtgatgtgggag 12761 Score = 42.1 bits (21), Expect = 1.6 Identities = 51/61 (83%) Strand = Plus / Minus Query: 160 tctctggtggagtgcgagggacacttccctggatggcccctgagctgttaaatggcagca 219 ||||||||||||| |||| || ||||| |||||||| || |||||| |||| || |||| Sbjct: 12951 tctctggtggagtaagaggaacccttccatggatggcaccagagctgctaaacggaagca 12892 Query: 220 g 220 | Sbjct: 12891 g 12891
>gb|AC138131.16| Medicago truncatula clone mth2-21h11, complete sequence Length = 127696 Score = 50.1 bits (25), Expect = 0.006 Identities = 94/117 (80%) Strand = Plus / Plus Query: 126 ttgggtttatcaaaggttaaatgccagacactgatctctggtggagtgcgagggacactt 185 |||||| |||| || || ||||| ||||||||||||||||| || ||| |||| || || Sbjct: 119676 ttgggtctatccaaagtaaaatgtcagacactgatctctggaggtgtgagaggaactcta 119735 Query: 186 ccctggatggcccctgagctgttaaatggcagcagtaaccttgtttctgaaaaggtc 242 || |||||||| || || || | ||||| ||||||| |||||| || || |||||| Sbjct: 119736 ccatggatggctccggaattgctgaatggaagcagtagccttgtatcagagaaggtc 119792
>gb|AC161864.9| Medicago truncatula clone mth2-69d21, complete sequence Length = 133324 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Minus Query: 15 tttggtatggaatatttgcacgggaagaatattgtgcacttcgatttgaagagtgataat 74 ||||| |||||||||||||| ||| |||||||| || || ||||||||| |||||||| Sbjct: 53897 tttggcatggaatatttgcatttgaaaaatattgttcattttgatttgaagtgtgataat 53838
>gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I3 map ve016, complete sequence Length = 108484 Score = 48.1 bits (24), Expect = 0.025 Identities = 60/72 (83%) Strand = Plus / Plus Query: 15 tttggtatggaatatttgcacgggaagaatattgtgcacttcgatttgaagagtgataat 74 ||||| ||||||||||||||| |||| || ||||| |||||||||||| ||||||| Sbjct: 102590 tttgggatggaatatttgcactcaaagagcatagtgcatttcgatttgaagtgtgataac 102649 Query: 75 ctgctcgtcaac 86 |||| |||||| Sbjct: 102650 ttgcttgtcaac 102661
>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1226_A12 Length = 113025 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 135 tcaaaggttaaatgccagacactgatctctggtggagtgcgagggacacttccctggatg 194 ||||| || ||||| ||||| || ||||||||||| ||| | ||||| ||||| |||||| Sbjct: 58224 tcaaaagtaaaatgtcagaccctcatctctggtggtgtgagggggactcttccatggatg 58283 Query: 195 gc 196 || Sbjct: 58284 gc 58285
>gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 genomic sequence, complete sequence Length = 126163 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 ctgatggagcagtgctggtca 413 ||||||||||||||||||||| Sbjct: 53457 ctgatggagcagtgctggtca 53477
>ref|NM_106605.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT1G79570 mRNA, complete cds Length = 4025 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 3 atggatgttgcatttggtatggaatattt 31 ||||||| ||||||||| ||||||||||| Sbjct: 3223 atggatgctgcatttggaatggaatattt 3251
>emb|AJ249142.1|HVU249142 Hordeum vulgare mRNA for MADS-box protein 1-2 (m1-2 gene) Length = 861 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 cacttcgatttgaagagtgataatc 75 |||||||| |||||||||||||||| Sbjct: 750 cacttcgagttgaagagtgataatc 726
>emb|AJ249141.1|HVU249141 Hordeum vulgare mRNA for MADS-box protein (m1 gene) Length = 1086 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 cacttcgatttgaagagtgataatc 75 |||||||| |||||||||||||||| Sbjct: 777 cacttcgagttgaagagtgataatc 753
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 ctgatggagcagtgctggtca 413 ||||||||||||||||||||| Sbjct: 16128278 ctgatggagcagtgctggtca 16128298
>gb|AC004882.3| Homo sapiens PAC clone RP1-76B20 from 22, complete sequence Length = 171682 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 ctggatggcccctgagctgtt 208 ||||||||||||||||||||| Sbjct: 133783 ctggatggcccctgagctgtt 133803
>dbj|AK222029.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL22-72-G01 Length = 931 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 3 atggatgttgcatttggtatggaatattt 31 ||||||| ||||||||| ||||||||||| Sbjct: 199 atggatgctgcatttggaatggaatattt 227
>gb|AC005529.7| Homo sapiens chromosome 22 clone bk256d12 map 22q12, complete sequence Length = 318488 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 ctggatggcccctgagctgtt 208 ||||||||||||||||||||| Sbjct: 315052 ctggatggcccctgagctgtt 315072
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 3 atggatgttgcatttggtatggaatatttgcac 35 ||||||| |||||||| ||||||||||||||| Sbjct: 24982949 atggatgcggcatttgggatggaatatttgcac 24982981
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 ctgatggagcagtgctggtca 413 ||||||||||||||||||||| Sbjct: 16122811 ctgatggagcagtgctggtca 16122831
>gb|AC007202.3|T8K14 Arabidopsis thaliana chromosome 1 BAC T8K14 sequence, complete sequence Length = 80374 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 3 atggatgttgcatttggtatggaatattt 31 ||||||| ||||||||| ||||||||||| Sbjct: 4190 atggatgctgcatttggaatggaatattt 4218
>dbj|AK099659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066I05, full insert sequence Length = 3804 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 ctgatggagcagtgctggtca 413 ||||||||||||||||||||| Sbjct: 3418 ctgatggagcagtgctggtca 3438
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 3 atggatgttgcatttggtatggaatatttgcac 35 ||||||| |||||||| ||||||||||||||| Sbjct: 24911155 atggatgcggcatttgggatggaatatttgcac 24911187
>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146686 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 3 atggatgttgcatttggtatggaatatttgcac 35 ||||||| |||||||| ||||||||||||||| Sbjct: 124218 atggatgcggcatttgggatggaatatttgcac 124186
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 atgttgcatttggtatggaa 26 |||||||||||||||||||| Sbjct: 248046 atgttgcatttggtatggaa 248027
>gb|BC044437.1| Danio rerio solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, mRNA (cDNA clone MGC:55601 IMAGE:2643595), complete cds Length = 2393 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1075 tcgctgagggagcagtgctggtca 1098
>ref|XM_865331.1| PREDICTED: Bos taurus similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 2 (LOC510529), mRNA Length = 6771 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctggatggcccctgagctg 206 |||||||||||||||||||| Sbjct: 5056 cctggatggcccctgagctg 5037
>ref|XM_875688.1| PREDICTED: Bos taurus similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 17 (LOC510529), mRNA Length = 6768 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctggatggcccctgagctg 206 |||||||||||||||||||| Sbjct: 5053 cctggatggcccctgagctg 5034
>ref|XM_875619.1| PREDICTED: Bos taurus similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 16 (LOC510529), mRNA Length = 6753 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctggatggcccctgagctg 206 |||||||||||||||||||| Sbjct: 5038 cctggatggcccctgagctg 5019
>ref|XM_875542.1| PREDICTED: Bos taurus similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 15 (LOC510529), mRNA Length = 6801 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctggatggcccctgagctg 206 |||||||||||||||||||| Sbjct: 5086 cctggatggcccctgagctg 5067
>ref|XM_875472.1| PREDICTED: Bos taurus similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 14 (LOC510529), mRNA Length = 6792 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctggatggcccctgagctg 206 |||||||||||||||||||| Sbjct: 5077 cctggatggcccctgagctg 5058
>ref|XM_875397.1| PREDICTED: Bos taurus similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 13 (LOC510529), mRNA Length = 6774 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctggatggcccctgagctg 206 |||||||||||||||||||| Sbjct: 5059 cctggatggcccctgagctg 5040
>ref|XM_875325.1| PREDICTED: Bos taurus similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 12 (LOC510529), mRNA Length = 6702 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctggatggcccctgagctg 206 |||||||||||||||||||| Sbjct: 4987 cctggatggcccctgagctg 4968
>ref|XM_875249.1| PREDICTED: Bos taurus similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 11 (LOC510529), mRNA Length = 6738 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctggatggcccctgagctg 206 |||||||||||||||||||| Sbjct: 5023 cctggatggcccctgagctg 5004
>ref|XM_875188.1| PREDICTED: Bos taurus similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 10 (LOC510529), mRNA Length = 6753 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctggatggcccctgagctg 206 |||||||||||||||||||| Sbjct: 5038 cctggatggcccctgagctg 5019
>ref|XM_875118.1| PREDICTED: Bos taurus similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 9 (LOC510529), mRNA Length = 6795 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctggatggcccctgagctg 206 |||||||||||||||||||| Sbjct: 5080 cctggatggcccctgagctg 5061
>ref|XM_587675.2| PREDICTED: Bos taurus similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 1 (LOC510529), mRNA Length = 6693 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctggatggcccctgagctg 206 |||||||||||||||||||| Sbjct: 4978 cctggatggcccctgagctg 4959
>ref|XM_874959.1| PREDICTED: Bos taurus similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 8 (LOC510529), mRNA Length = 6781 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctggatggcccctgagctg 206 |||||||||||||||||||| Sbjct: 5059 cctggatggcccctgagctg 5040
>ref|XM_874879.1| PREDICTED: Bos taurus similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 7 (LOC510529), mRNA Length = 5707 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctggatggcccctgagctg 206 |||||||||||||||||||| Sbjct: 5056 cctggatggcccctgagctg 5037
>ref|NM_213452.2| Danio rerio solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 (slc13a2), mRNA Length = 2537 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1051 tcgctgagggagcagtgctggtca 1074
>emb|AJ249168.1|SAU249168 Staphylococcus aureus aur gene, strain 01 Length = 1830 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 atggcagcagtaaccttgtt 230 |||||||||||||||||||| Sbjct: 176 atggcagcagtaaccttgtt 195
>gb|AC099618.4| Mus musculus chromosome 1, clone RP23-455H15, complete sequence Length = 171215 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 aggttaaatgccagacactg 158 |||||||||||||||||||| Sbjct: 74070 aggttaaatgccagacactg 74051
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 gccgacggagcggccgagct 438 |||||||||||||||||||| Sbjct: 1814041 gccgacggagcggccgagct 1814060
>ref|XM_504418.1| Yarrowia lipolytica CLIB122, YALI0E26279g predicted mRNA Length = 1278 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tggtggagtgcgagggacac 183 |||||||||||||||||||| Sbjct: 466 tggtggagtgcgagggacac 447
>emb|AL139403.7| Human DNA sequence from clone RP11-33K5 on chromosome 10p14-15.3 Contains a novel pseudogene (FLJ20420), complete sequence Length = 111344 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 142 ttaaatgccagacactgatctctg 165 |||||||||||||||| ||||||| Sbjct: 79715 ttaaatgccagacacttatctctg 79692
>emb|Z47979.1|PFCYT1234 P.fluorescens cyt[1,2,3,4,5,6,7,8] genes Length = 5777 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 acctgcattacggcgccatc 323 |||||||||||||||||||| Sbjct: 4889 acctgcattacggcgccatc 4908
>gb|BC063947.1| Danio rerio solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, mRNA (cDNA clone MGC:77607 IMAGE:6996476), complete cds Length = 2537 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1051 tcgctgagggagcagtgctggtca 1074
>emb|AL596182.28| Mouse DNA sequence from clone RP23-303F24 on chromosome 11 Contains a pseudogene similar to part of glyceraldehyde-3-phosphate dehydrogenase (Gapd), the Irf1 gene for interferon regulatory factor 1, a novel gene, the Slc22a5 gene for solute carrier family 22 (organic cation transporter) member 5, a ribosomal protein L27a (Rpl27a) pseudogene, a cyclin-dependent kinase 4 (Cdk4) pseudogene and two CpG islands, complete sequence Length = 191494 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gccagacactgatctctggt 167 |||||||||||||||||||| Sbjct: 151947 gccagacactgatctctggt 151966
>ref|XM_702002.1| PREDICTED: Danio rerio similar to Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, transcript variant 10 (LOC572872), mRNA Length = 2538 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1125 tcgctgagggagcagtgctggtca 1148
>ref|XM_702001.1| PREDICTED: Danio rerio similar to Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, transcript variant 9 (LOC572872), mRNA Length = 2559 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1125 tcgctgagggagcagtgctggtca 1148
>ref|XM_702000.1| PREDICTED: Danio rerio similar to Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, transcript variant 8 (LOC572872), mRNA Length = 2532 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1062 tcgctgagggagcagtgctggtca 1085
>ref|XM_701999.1| PREDICTED: Danio rerio similar to Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, transcript variant 7 (LOC572872), mRNA Length = 2502 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1062 tcgctgagggagcagtgctggtca 1085
>ref|XM_701998.1| PREDICTED: Danio rerio similar to Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, transcript variant 6 (LOC572872), mRNA Length = 2466 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1062 tcgctgagggagcagtgctggtca 1085
>ref|XM_701997.1| PREDICTED: Danio rerio similar to Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, transcript variant 5 (LOC572872), mRNA Length = 2517 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1080 tcgctgagggagcagtgctggtca 1103
>ref|XM_701996.1| PREDICTED: Danio rerio similar to Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, transcript variant 4 (LOC572872), mRNA Length = 2565 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1137 tcgctgagggagcagtgctggtca 1160
>ref|XM_701995.1| PREDICTED: Danio rerio similar to Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, transcript variant 3 (LOC572872), mRNA Length = 2535 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1104 tcgctgagggagcagtgctggtca 1127
>ref|XM_701994.1| PREDICTED: Danio rerio similar to Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, transcript variant 2 (LOC572872), mRNA Length = 2571 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1134 tcgctgagggagcagtgctggtca 1157
>ref|XM_678452.1| PREDICTED: Danio rerio similar to Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, transcript variant 1 (LOC572872), mRNA Length = 2595 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1125 tcgctgagggagcagtgctggtca 1148
>ref|XM_701736.1| PREDICTED: Danio rerio similar to Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, transcript variant 6 (LOC556824), mRNA Length = 2530 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1062 tcgctgagggagcagtgctggtca 1085
>ref|XM_677978.1| PREDICTED: Danio rerio similar to Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, transcript variant 1 (LOC556824), mRNA Length = 2557 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1125 tcgctgagggagcagtgctggtca 1148
>ref|XM_701735.1| PREDICTED: Danio rerio similar to Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, transcript variant 5 (LOC556824), mRNA Length = 2494 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1062 tcgctgagggagcagtgctggtca 1085
>ref|XM_701734.1| PREDICTED: Danio rerio similar to Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, transcript variant 4 (LOC556824), mRNA Length = 2515 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1083 tcgctgagggagcagtgctggtca 1106
>ref|XM_701733.1| PREDICTED: Danio rerio similar to Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, transcript variant 3 (LOC556824), mRNA Length = 2536 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1107 tcgctgagggagcagtgctggtca 1130
>ref|XM_701732.1| PREDICTED: Danio rerio similar to Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, transcript variant 2 (LOC556824), mRNA Length = 2593 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 1125 tcgctgagggagcagtgctggtca 1148
>ref|XM_682568.1| PREDICTED: Danio rerio similar to sterile-alpha motif and leucine zipper containing kinase AZK (LOC559247), mRNA Length = 2403 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 ttccctggatggcccctgag 203 |||||||||||||||||||| Sbjct: 509 ttccctggatggcccctgag 528
>emb|BX465229.7| Zebrafish DNA sequence from clone CH211-174D2 in linkage group 2, complete sequence Length = 154954 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 73003 tcgctgagggagcagtgctggtca 72980
>gb|AY607694.1| Apium graveolens var. dulce clone CTL041 MAP kinase kinase kinase mRNA, partial cds Length = 322 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 aaggtcggcgatttgggtttatca 137 |||||||||||||| ||||||||| Sbjct: 252 aaggtcggcgatttcggtttatca 275
>emb|BX649570.7| Zebrafish DNA sequence from clone CH211-13L22 in linkage group 21, complete sequence Length = 157398 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 aaaggttaaatgccagacactgat 160 |||||||||||| ||||||||||| Sbjct: 131561 aaaggttaaatgacagacactgat 131584
>emb|BX004769.9| Zebrafish DNA sequence from clone DKEY-15I8 in linkage group 9, complete sequence Length = 154745 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 ttccctggatggcccctgag 203 |||||||||||||||||||| Sbjct: 37209 ttccctggatggcccctgag 37228
>emb|BX004995.15| Zebrafish DNA sequence from clone CH211-179G4 in linkage group 20, complete sequence Length = 156160 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 137 aaaggttaaatgccagacactgat 160 |||||||||||| ||||||||||| Sbjct: 63430 aaaggttaaatgacagacactgat 63407
>emb|BX005137.9| Zebrafish DNA sequence from clone CH211-167L17 in linkage group 21, complete sequence Length = 156370 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcgctgatggagcagtgctggtca 413 ||||||| |||||||||||||||| Sbjct: 36551 tcgctgagggagcagtgctggtca 36574
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 atggcagcagtaaccttgtt 230 |||||||||||||||||||| Sbjct: 2657783 atggcagcagtaaccttgtt 2657764
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tggtggagtgcgagggacac 183 |||||||||||||||||||| Sbjct: 3119255 tggtggagtgcgagggacac 3119236
>gb|U35673.1|BBU35673 Borrelia burgdorferi OrfR gene, partial cds, and S20, Hbb, OrfH and Rho genes, complete cds Length = 3399 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tatcaaaggttaaatgccag 152 |||||||||||||||||||| Sbjct: 1201 tatcaaaggttaaatgccag 1220 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,019,733 Number of Sequences: 3902068 Number of extensions: 3019733 Number of successful extensions: 62898 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 62616 Number of HSP's gapped (non-prelim): 277 length of query: 456 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 434 effective length of database: 17,147,199,772 effective search space: 7441884701048 effective search space used: 7441884701048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)