ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd1j14 |
|---|---|
| Clone Library Name | barley_pub |
>ETFD_HUMAN (Q16134) Electron transfer flavoprotein-ubiquinone oxidoreductase,| mitochondrial precursor (EC 1.5.5.1) (ETF-QO) (ETF-ubiquinone oxidoreductase) (ETF dehydrogenase) (Electron-transferring-flavoprotein dehydrogenase) Length = 617 Score = 69.7 bits (169), Expect = 5e-12 Identities = 30/49 (61%), Positives = 40/49 (81%) Frame = +2 Query: 398 AIGLVVALNYRNPFISPYDEFQKFKQHPAIRTLLEGGTVLQYGARTLNE 544 A+GLVV L+Y+NP++SP+ EFQ++K HP+IR LEGG + YGAR LNE Sbjct: 320 ALGLVVGLDYQNPYLSPFREFQRWKHHPSIRPTLEGGKRIAYGARALNE 368
>ETFD_RAT (Q6UPE1) Electron transfer flavoprotein-ubiquinone oxidoreductase,| mitochondrial precursor (EC 1.5.5.1) (ETF-QO) (ETF-ubiquinone oxidoreductase) (ETF dehydrogenase) (Electron-transferring-flavoprotein dehydrogenase) Length = 616 Score = 68.6 bits (166), Expect = 1e-11 Identities = 29/49 (59%), Positives = 39/49 (79%) Frame = +2 Query: 398 AIGLVVALNYRNPFISPYDEFQKFKQHPAIRTLLEGGTVLQYGARTLNE 544 A+G VV L+Y+NP++SP+ EFQ++K HP+IR LEGG + YGAR LNE Sbjct: 319 AVGFVVGLDYQNPYLSPFREFQRWKHHPSIRPTLEGGKRIAYGARALNE 367
>ETFD_PIG (P55931) Electron transfer flavoprotein-ubiquinone oxidoreductase,| mitochondrial precursor (EC 1.5.5.1) (ETF-QO) (ETF-ubiquinone oxidoreductase) (ETF dehydrogenase) (Electron-transferring-flavoprotein dehydrogenase) (Fragment) Length = 607 Score = 67.0 bits (162), Expect = 3e-11 Identities = 28/49 (57%), Positives = 39/49 (79%) Frame = +2 Query: 398 AIGLVVALNYRNPFISPYDEFQKFKQHPAIRTLLEGGTVLQYGARTLNE 544 A+G VV L+Y+NP++SP+ EFQ++K HP+I+ LEGG + YGAR LNE Sbjct: 310 ALGFVVGLDYQNPYLSPFREFQRWKHHPSIKPTLEGGKRIAYGARALNE 358
>ETFD_MOUSE (Q921G7) Electron transfer flavoprotein-ubiquinone oxidoreductase,| mitochondrial precursor (EC 1.5.5.1) (ETF-QO) (ETF-ubiquinone oxidoreductase) (ETF dehydrogenase) (Electron-transferring-flavoprotein dehydrogenase) Length = 616 Score = 67.0 bits (162), Expect = 3e-11 Identities = 28/49 (57%), Positives = 39/49 (79%) Frame = +2 Query: 398 AIGLVVALNYRNPFISPYDEFQKFKQHPAIRTLLEGGTVLQYGARTLNE 544 A+G VV L+Y+NP++SP+ EFQ++K HP+I+ LEGG + YGAR LNE Sbjct: 319 AVGFVVGLDYQNPYLSPFREFQRWKHHPSIQPTLEGGKRIAYGARALNE 367
>ETFD_YEAST (Q08822) Probable electron transfer flavoprotein-ubiquinone| oxidoreductase, mitochondrial precursor (EC 1.5.5.1) (ETF-QO) (ETF-ubiquinone oxidoreductase) (ETF dehydrogenase) (Electron-transferring-flavoprotein dehydrogenase) Length = 631 Score = 65.9 bits (159), Expect = 7e-11 Identities = 28/48 (58%), Positives = 35/48 (72%) Frame = +2 Query: 401 IGLVVALNYRNPFISPYDEFQKFKQHPAIRTLLEGGTVLQYGARTLNE 544 +GLVV L+Y+NP++SPY EFQK K HP +LEGG + Y AR LNE Sbjct: 318 VGLVVGLDYKNPYVSPYKEFQKMKHHPYYSKVLEGGKCIAYAARALNE 365
>ETFD_CAEEL (Q11190) Probable electron transfer flavoprotein-ubiquinone| oxidoreductase, mitochondrial precursor (EC 1.5.5.1) (ETF-QO) (ETF-ubiquinone oxidoreductase) (ETF dehydrogenase) (Electron-transferring-flavoprotein dehydrogenase) (Lethal protein 72 Length = 597 Score = 65.1 bits (157), Expect = 1e-10 Identities = 29/49 (59%), Positives = 37/49 (75%) Frame = +2 Query: 398 AIGLVVALNYRNPFISPYDEFQKFKQHPAIRTLLEGGTVLQYGARTLNE 544 ++G VVAL+Y NP ++PY EFQK+K HP+I LEGG + YGAR LNE Sbjct: 301 SVGFVVALDYANPNLNPYKEFQKYKTHPSISKQLEGGKRIGYGARALNE 349
>ETFD_PSEAE (Q9HZP5) Electron transfer flavoprotein-ubiquinone oxidoreductase| (EC 1.5.5.1) (ETF-QO) (ETF-ubiquinone oxidoreductase) (ETF dehydrogenase) (Electron-transferring-flavoprotein dehydrogenase) Length = 551 Score = 61.2 bits (147), Expect = 2e-09 Identities = 23/46 (50%), Positives = 35/46 (76%) Frame = +2 Query: 401 IGLVVALNYRNPFISPYDEFQKFKQHPAIRTLLEGGTVLQYGARTL 538 +GL++ L+Y NP +SP+DEFQ++K HP ++ LEGG + YGAR + Sbjct: 261 VGLIIDLSYSNPHLSPFDEFQRYKHHPVVKQYLEGGKRVAYGARAI 306
>ETFD_SCHPO (P87111) Probable electron transfer flavoprotein-ubiquinone| oxidoreductase, mitochondrial precursor (EC 1.5.5.1) (ETF-QO) (ETF-ubiquinone oxidoreductase) (ETF dehydrogenase) (Electron-transferring-flavoprotein dehydrogenase) Length = 632 Score = 58.5 bits (140), Expect = 1e-08 Identities = 26/48 (54%), Positives = 35/48 (72%) Frame = +2 Query: 401 IGLVVALNYRNPFISPYDEFQKFKQHPAIRTLLEGGTVLQYGARTLNE 544 +GLVV L+Y NP++SP EFQ+ KQ+P +L+GG L+Y AR LNE Sbjct: 339 VGLVVGLDYPNPYVSPALEFQRMKQNPFFAKVLKGGKCLEYAARALNE 386
>ETFD_ACIAD (P94132) Probable electron transfer flavoprotein-ubiquinone| oxidoreductase (EC 1.5.5.1) (ETF-QO) (ETF-ubiquinone oxidoreductase) (ETF dehydrogenase) (Electron-transferring-flavoprotein dehydrogenase) Length = 570 Score = 51.6 bits (122), Expect = 1e-06 Identities = 21/46 (45%), Positives = 32/46 (69%) Frame = +2 Query: 401 IGLVVALNYRNPFISPYDEFQKFKQHPAIRTLLEGGTVLQYGARTL 538 +G++V L+Y NP + P+ E Q++K HP I+ LEGG + YGAR + Sbjct: 265 LGMIVDLSYENPHMFPFMEMQRWKTHPLIKQYLEGGKRISYGARAV 310
>YDIS_ECOLI (P77337) Probable electron transfer flavoprotein-quinone| oxidoreductase ydiS (EC 1.5.5.-) Length = 429 Score = 36.2 bits (82), Expect = 0.061 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = +2 Query: 461 QKFKQHPAIRTLLEGGTVLQYGARTLNE 544 + FKQHPAIR L+ GG +L+Y A + E Sbjct: 256 EDFKQHPAIRPLISGGKLLEYSAHMVPE 283
>FIXC_AZOCA (P26484) Protein fixC| Length = 435 Score = 35.0 bits (79), Expect = 0.14 Identities = 16/48 (33%), Positives = 29/48 (60%) Frame = +2 Query: 401 IGLVVALNYRNPFISPYDEFQKFKQHPAIRTLLEGGTVLQYGARTLNE 544 IG +V+ +++ +PY ++FK HP++ L+EG V +Y A + E Sbjct: 240 IGCLVS-DFQKTGETPYGLLERFKSHPSVAPLIEGSEVKEYAAHLIPE 286
>FIXC_RHISN (Q53208) Protein fixC| Length = 435 Score = 34.3 bits (77), Expect = 0.23 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 Query: 443 SPYDEFQKFKQHPAIRTLLEGGTVLQYGARTLNE 544 SPY FK HP+IR LL G + +Y A + E Sbjct: 253 SPYALLDAFKNHPSIRPLLAGSEIKEYAAHLIPE 286
>FIXC_SALTY (Q8ZRW9) Protein fixC| Length = 428 Score = 33.9 bits (76), Expect = 0.30 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Frame = +2 Query: 398 AIGLVVALNY-RNPFISPYDEFQKFKQHPAIRTLLEGGTVLQYGARTLNE 544 ++GLV L++ ++ S + FKQHPA+ L+ GG +++Y A + E Sbjct: 234 SLGLVCGLHHLKDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYAAHVVPE 283
>FIXC_SALTI (Q8Z9K9) Protein fixC| Length = 428 Score = 33.9 bits (76), Expect = 0.30 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Frame = +2 Query: 398 AIGLVVALNY-RNPFISPYDEFQKFKQHPAIRTLLEGGTVLQYGARTLNE 544 ++GLV L++ ++ S + FKQHPA+ L+ GG +++Y A + E Sbjct: 234 SLGLVCGLHHLKDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYAAHVVPE 283
>FIXC_SHIFL (Q83SQ7) Protein fixC| Length = 428 Score = 33.5 bits (75), Expect = 0.40 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = +2 Query: 398 AIGLVVALNYRNPFISPYDEF-QKFKQHPAIRTLLEGGTVLQYGARTLNE 544 ++GLV L++ + + + FKQHPA+ L+ GG +++Y A + E Sbjct: 234 SLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPE 283
>FIXC_ECOLI (P68644) Protein fixC| Length = 428 Score = 33.5 bits (75), Expect = 0.40 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = +2 Query: 398 AIGLVVALNYRNPFISPYDEF-QKFKQHPAIRTLLEGGTVLQYGARTLNE 544 ++GLV L++ + + + FKQHPA+ L+ GG +++Y A + E Sbjct: 234 SLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPE 283
>FIXC_ECOL6 (P68645) Protein fixC| Length = 428 Score = 33.5 bits (75), Expect = 0.40 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = +2 Query: 398 AIGLVVALNYRNPFISPYDEF-QKFKQHPAIRTLLEGGTVLQYGARTLNE 544 ++GLV L++ + + + FKQHPA+ L+ GG +++Y A + E Sbjct: 234 SLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPE 283
>FIXC_ECO57 (Q7AHT0) Protein fixC| Length = 428 Score = 33.5 bits (75), Expect = 0.40 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = +2 Query: 398 AIGLVVALNYRNPFISPYDEF-QKFKQHPAIRTLLEGGTVLQYGARTLNE 544 ++GLV L++ + + + FKQHPA+ L+ GG +++Y A + E Sbjct: 234 SLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPE 283
>FIXC_RHIME (P09820) Protein fixC| Length = 435 Score = 33.1 bits (74), Expect = 0.52 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = +2 Query: 401 IGLVVALNYRNPFISPYDEFQKFKQHPAIRTLLEGGTVLQYGARTLNE 544 IG +++ N+ PY FK+HP+I+ L+ G V +Y A + E Sbjct: 240 IGCLIS-NFAETMERPYALLDAFKRHPSIQPLIAGSEVKEYAAHLIPE 286
>FIXC_BRAJA (P10331) Protein fixC| Length = 435 Score = 33.1 bits (74), Expect = 0.52 Identities = 16/48 (33%), Positives = 28/48 (58%) Frame = +2 Query: 401 IGLVVALNYRNPFISPYDEFQKFKQHPAIRTLLEGGTVLQYGARTLNE 544 IG +VA +++ +PY +FK+HP++ L+ G V +Y A + E Sbjct: 240 IGCLVA-DFQRTGQTPYGLLDEFKRHPSVAPLIAGSEVKEYSAHLIPE 286
>FIXC_AZOVI (P53572) Protein fixC| Length = 427 Score = 32.7 bits (73), Expect = 0.67 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = +2 Query: 422 NYRNPFISPYDEFQKFKQHPAIRTLLEGGTVLQYGARTLNE 544 +++ ISPY+ + K HP+I L+ G + +Y A + E Sbjct: 240 DFKQQKISPYELLDRMKTHPSIAPLIAGSDMKEYAAHLIPE 280
>YGCN_ECOLI (Q46904) Probable electron transfer flavoprotein-quinone| oxidoreductase ygcN (EC 1.5.5.-) Length = 423 Score = 31.2 bits (69), Expect = 2.0 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = +2 Query: 398 AIGLVVALNYRNPFISPYDEF-QKFKQHPAIRTLLEGGTVLQYGARTLNE 544 ++G+V L+ P E +FK HPA+R L++ L+YGA + E Sbjct: 228 SLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPE 277
>ARV1_YEAST (Q06541) Protein ARV1| Length = 321 Score = 29.3 bits (64), Expect = 7.5 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = +3 Query: 312 SLIDCNFLKCYSEV*ITCIQSYFCSYFS*QLVWLLP*IIEILLS 443 +L DC L+ Y++ + ++++FC Y +WLL EI L+ Sbjct: 77 ALNDCQCLRDYTQALLFNVKNWFCKYDRLNRLWLLLLSFEIYLT 120 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,162,058 Number of Sequences: 219361 Number of extensions: 1317581 Number of successful extensions: 2764 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 2716 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2764 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
