ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd1h24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ACK1_HUMAN (Q07912) Activated CDC42 kinase 1 (EC 2.7.10.2) (ACK-... 30 2.7
2HRCA_LACPL (Q88VL8) Heat-inducible transcription repressor hrcA 29 7.8

>ACK1_HUMAN (Q07912) Activated CDC42 kinase 1 (EC 2.7.10.2) (ACK-1) (Tyrosine|
            kinase non-receptor protein 2)
          Length = 1036

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +2

Query: 65   GVRAGDVDAALRCEVWMLSRVKNYLQ-DQLLGFALVP 172
            GV   +  AAL+C  W + R   YL+ +QL G  L P
Sbjct: 967  GVTTEECQAALQCHGWSVQRAAQYLKVEQLFGLGLRP 1003



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>HRCA_LACPL (Q88VL8) Heat-inducible transcription repressor hrcA|
          Length = 347

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +2

Query: 116 LSRVKNYLQDQLLGFALVPLPDVVAAEGGTLAREFPLSTNDLFHSPAGFLEL 271
           L  V  ++ DQL+G   +PL DV+      L  E PL        P GFL++
Sbjct: 176 LEPVVRFIDDQLVG---LPLQDVLRQ----LTHEIPLKLAQYLQDPDGFLDI 220


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,003,153
Number of Sequences: 219361
Number of extensions: 804449
Number of successful extensions: 2771
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2770
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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