ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd1h24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_186999.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1689 Score = 414 bits (209), Expect = e-112 Identities = 308/341 (90%) Strand = Plus / Plus Query: 8 acgcaggtaatcaatggcggaggccgcaacccggtgtttgaccagtcggtgcgcgtcggc 67 |||||||| ||||| ||||| || |||||||||||||| ||||||||| ||||| | ||| Sbjct: 348 acgcaggtcatcaacggcggggggcgcaacccggtgttcgaccagtcgctgcgcctgggc 407 Query: 68 gtgcgcgcgggggacgtcgacgccgcgctccgctgcgaggtctggatgctcagccgggtc 127 |||||||| ||||||||||||| ||||||||| |||||||| |||||||| ||||||||| Sbjct: 408 gtgcgcgccggggacgtcgacggcgcgctccggtgcgaggtgtggatgctgagccgggtc 467 Query: 128 aagaattacctgcaggaccagctgctggggttcgcgctcgtgccgctcccggacgtcgtc 187 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 aagaactacctgcaggaccagctgctggggttcgcgctcgtgccgctcccggacgtcgtc 527 Query: 188 gccgccgagggcggcacgctcgcgcgcgaattcccgctctccaccaacgacctcttccac 247 ||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| Sbjct: 528 gccgccgagggcggcacgctcgcccgcgagttcccgctctccaccaacgacatcttccac 587 Query: 248 tccccggccggcttcttggagctcgagctctcttacatcggggtcgtgcccgatgtcatt 307 |||| ||||| ||| || |||||||||| || ||||||||||||||||| || ||| | Sbjct: 588 tcccacgccgggttcctgcagctcgagctgtcctacatcggggtcgtgcctgaggtcgtg 647 Query: 308 cccgtctcgcccacgcccaagcctgcgctggccgacccgga 348 ||| ||||||| ||||||||||| || ||||||||| |||| Sbjct: 648 cccatctcgccgacgcccaagccggccctggccgacgcgga 688
>gb|AY596584.1| Saccharum officinarum clone SCCCRZ1003F10, complete sequence Length = 2010 Score = 414 bits (209), Expect = e-112 Identities = 314/349 (89%) Strand = Plus / Minus Query: 5 tccacgcaggtaatcaatggcggaggccgcaacccggtgtttgaccagtcggtgcgcgtc 64 ||||||||||| |||| ||||| ||||||||||||||||| ||||||||| ||||| || Sbjct: 1456 tccacgcaggtggtcaacggcgggggccgcaacccggtgttcgaccagtcgctgcgcctc 1397 Query: 65 ggcgtgcgcgcgggggacgtcgacgccgcgctccgctgcgaggtctggatgctcagccgg 124 ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1396 ggcgtgcgctcgggggacgtcgacgccgcgctccgctgcgaggtgtggatgctcagccgg 1337 Query: 125 gtcaagaattacctgcaggaccagctgctggggttcgcgctcgtgccgctcccggacgtc 184 |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 1336 gtcaagaactacatgcaggaccagctgctgggcttcgcgctcgtgccgctcccggaggtc 1277 Query: 185 gtcgccgccgagggcggcacgctcgcgcgcgaattcccgctctccaccaacgacctcttc 244 ||||||||||| |||||||||||||| ||||| ||||||||| |||||| |||||||||| Sbjct: 1276 gtcgccgccgacggcggcacgctcgcccgcgagttcccgctcaccaccagcgacctcttc 1217 Query: 245 cactccccggccggcttcttggagctcgagctctcttacatcggggtcgtgcccgatgtc 304 || |||| | || ||| || ||||||||||||| ||||||||||||||||| || ||| Sbjct: 1216 cagaccccctcagggttcctgcagctcgagctctcctacatcggggtcgtgccggaggtc 1157 Query: 305 attcccgtctcgcccacgcccaagcctgcgctggccgacccggacgagg 353 | ||| ||||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 1156 gtgcccatctcgcccacgcctaagccggcgctggccgacccggaggagg 1108
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 414 bits (209), Expect = e-112 Identities = 308/341 (90%) Strand = Plus / Plus Query: 8 acgcaggtaatcaatggcggaggccgcaacccggtgtttgaccagtcggtgcgcgtcggc 67 |||||||| ||||| ||||| || |||||||||||||| ||||||||| ||||| | ||| Sbjct: 23693744 acgcaggtcatcaacggcggggggcgcaacccggtgttcgaccagtcgctgcgcctgggc 23693803 Query: 68 gtgcgcgcgggggacgtcgacgccgcgctccgctgcgaggtctggatgctcagccgggtc 127 |||||||| ||||||||||||| ||||||||| |||||||| |||||||| ||||||||| Sbjct: 23693804 gtgcgcgccggggacgtcgacggcgcgctccggtgcgaggtgtggatgctgagccgggtc 23693863 Query: 128 aagaattacctgcaggaccagctgctggggttcgcgctcgtgccgctcccggacgtcgtc 187 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23693864 aagaactacctgcaggaccagctgctggggttcgcgctcgtgccgctcccggacgtcgtc 23693923 Query: 188 gccgccgagggcggcacgctcgcgcgcgaattcccgctctccaccaacgacctcttccac 247 ||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| Sbjct: 23693924 gccgccgagggcggcacgctcgcccgcgagttcccgctctccaccaacgacatcttccac 23693983 Query: 248 tccccggccggcttcttggagctcgagctctcttacatcggggtcgtgcccgatgtcatt 307 |||| ||||| ||| || |||||||||| || ||||||||||||||||| || ||| | Sbjct: 23693984 tcccacgccgggttcctgcagctcgagctgtcctacatcggggtcgtgcctgaggtcgtg 23694043 Query: 308 cccgtctcgcccacgcccaagcctgcgctggccgacccgga 348 ||| ||||||| ||||||||||| || ||||||||| |||| Sbjct: 23694044 cccatctcgccgacgcccaagccggccctggccgacgcgga 23694084 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 199 cggcacgctcgcgcgcgaattcccgctctccac 231 |||||||||||| ||||| |||||||||||||| Sbjct: 18271713 cggcacgctcgcccgcgagttcccgctctccac 18271745
>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1060_D03 Length = 102178 Score = 414 bits (209), Expect = e-112 Identities = 308/341 (90%) Strand = Plus / Plus Query: 8 acgcaggtaatcaatggcggaggccgcaacccggtgtttgaccagtcggtgcgcgtcggc 67 |||||||| ||||| ||||| || |||||||||||||| ||||||||| ||||| | ||| Sbjct: 38358 acgcaggtcatcaacggcggggggcgcaacccggtgttcgaccagtcgctgcgcctgggc 38417 Query: 68 gtgcgcgcgggggacgtcgacgccgcgctccgctgcgaggtctggatgctcagccgggtc 127 |||||||| ||||||||||||| ||||||||| |||||||| |||||||| ||||||||| Sbjct: 38418 gtgcgcgccggggacgtcgacggcgcgctccggtgcgaggtgtggatgctgagccgggtc 38477 Query: 128 aagaattacctgcaggaccagctgctggggttcgcgctcgtgccgctcccggacgtcgtc 187 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38478 aagaactacctgcaggaccagctgctggggttcgcgctcgtgccgctcccggacgtcgtc 38537 Query: 188 gccgccgagggcggcacgctcgcgcgcgaattcccgctctccaccaacgacctcttccac 247 ||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| Sbjct: 38538 gccgccgagggcggcacgctcgcccgcgagttcccgctctccaccaacgacatcttccac 38597 Query: 248 tccccggccggcttcttggagctcgagctctcttacatcggggtcgtgcccgatgtcatt 307 |||| ||||| ||| || |||||||||| || ||||||||||||||||| || ||| | Sbjct: 38598 tcccacgccgggttcctgcagctcgagctgtcctacatcggggtcgtgcctgaggtcgtg 38657 Query: 308 cccgtctcgcccacgcccaagcctgcgctggccgacccgga 348 ||| ||||||| ||||||||||| || ||||||||| |||| Sbjct: 38658 cccatctcgccgacgcccaagccggccctggccgacgcgga 38698
>dbj|AK071269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088L08, full insert sequence Length = 1690 Score = 406 bits (205), Expect = e-110 Identities = 307/341 (90%) Strand = Plus / Plus Query: 8 acgcaggtaatcaatggcggaggccgcaacccggtgtttgaccagtcggtgcgcgtcggc 67 |||||||| ||||| ||||| || |||||||||||||| ||||||||| ||||| | ||| Sbjct: 349 acgcaggtcatcaacggcggggggcgcaacccggtgttcgaccagtcgctgcgcctgggc 408 Query: 68 gtgcgcgcgggggacgtcgacgccgcgctccgctgcgaggtctggatgctcagccgggtc 127 |||||||| |||||||| |||| ||||||||| |||||||| |||||||| ||||||||| Sbjct: 409 gtgcgcgccggggacgtagacggcgcgctccggtgcgaggtgtggatgctgagccgggtc 468 Query: 128 aagaattacctgcaggaccagctgctggggttcgcgctcgtgccgctcccggacgtcgtc 187 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 aagaactacctgcaggaccagctgctggggttcgcgctcgtgccgctcccggacgtcgtc 528 Query: 188 gccgccgagggcggcacgctcgcgcgcgaattcccgctctccaccaacgacctcttccac 247 ||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| Sbjct: 529 gccgccgagggcggcacgctcgcccgcgagttcccgctctccaccaacgacatcttccac 588 Query: 248 tccccggccggcttcttggagctcgagctctcttacatcggggtcgtgcccgatgtcatt 307 |||| ||||| ||| || |||||||||| || ||||||||||||||||| || ||| | Sbjct: 589 tcccacgccgggttcctgcagctcgagctgtcctacatcggggtcgtgcctgaggtcgtg 648 Query: 308 cccgtctcgcccacgcccaagcctgcgctggccgacccgga 348 ||| ||||||| ||||||||||| || ||||||||| |||| Sbjct: 649 cccatctcgccgacgcccaagccggccctggccgacgcgga 689
>gb|AY107407.1| Zea mays PCO113924 mRNA sequence Length = 773 Score = 331 bits (167), Expect = 1e-87 Identities = 250/278 (89%) Strand = Plus / Plus Query: 71 cgcgcgggggacgtcgacgccgcgctccgctgcgaggtctggatgctcagccgggtcaag 130 |||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||| Sbjct: 1 cgcgcgggggacgtcgacgccgcgatccggtgcgaggtctggatgctcagccgcgtcaag 60 Query: 131 aattacctgcaggaccagctgctggggttcgcgctcgtgccgctcccggacgtcgtcgcc 190 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 61 aactacctgcaggaccagctgctggggttcgcgctcgtgccgctcccggaggtcgtcgcc 120 Query: 191 gccgagggcggcacgctcgcgcgcgaattcccgctctccaccaacgacctcttccactcc 250 ||||| |||||||||||||| ||||| || |||||| |||||| |||||||||||| || Sbjct: 121 gccgacggcggcacgctcgcccgcgactttccgctcaccaccagcgacctcttccagacc 180 Query: 251 ccggccggcttcttggagctcgagctctcttacatcggggtcgtgcccgatgtcattccc 310 || | || ||| || ||||||||||||| ||||||||||||||||| || ||| | ||| Sbjct: 181 ccctcggggttcctgcagctcgagctctcctacatcggggtcgtgccggaggtcgtgccc 240 Query: 311 gtctcgcccacgcccaagcctgcgctggccgacccgga 348 ||||||| |||||||||| ||||||||||||||||| Sbjct: 241 atctcgccgacgcccaagcnggcgctggccgacccgga 278 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 389 gggaaagactacgagaatatggagttccctgacatgaatcttgtggaggaaaaccagatt 448 |||||||| |||||||| || |||||||||||| | ||||| |||||||| |||||||| Sbjct: 307 gggaaagagtacgagaagatcgagttccctgacctcaatctcgtggaggagaaccagatc 366 Query: 449 atgctctc 456 ||| |||| Sbjct: 367 atggtctc 374
>ref|NM_189780.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1191 Score = 50.1 bits (25), Expect = 0.007 Identities = 91/113 (80%) Strand = Plus / Plus Query: 143 gaccagctgctggggttcgcgctcgtgccgctcccggacgtcgtcgccgccgagggcggc 202 |||||||| || || |||||||||||||||||| | | ||||| |||||||| |||| Sbjct: 337 gaccagctcctcggcttcgcgctcgtgccgctcgccgccgtcgcggccgccgacggcgcg 396 Query: 203 acgctcgcgcgcgaattcccgctctccaccaacgacctcttccactccccggc 255 |||||||| || ||| |||| || ||| ||||||||||||||| ||||| Sbjct: 397 cggctcgcgcaggacttctcgctgtcgtccaccgacctcttccactcgccggc 449
>ref|XM_478185.1| Oryza sativa (japonica cultivar-group), mRNA Length = 342 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 199 cggcacgctcgcgcgcgaattcccgctctccac 231 |||||||||||| ||||| |||||||||||||| Sbjct: 174 cggcacgctcgcccgcgagttcccgctctccac 142
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.007 Identities = 91/113 (80%) Strand = Plus / Minus Query: 143 gaccagctgctggggttcgcgctcgtgccgctcccggacgtcgtcgccgccgagggcggc 202 |||||||| || || |||||||||||||||||| | | ||||| |||||||| |||| Sbjct: 41994513 gaccagctcctcggcttcgcgctcgtgccgctcgccgccgtcgcggccgccgacggcgcg 41994454 Query: 203 acgctcgcgcgcgaattcccgctctccaccaacgacctcttccactccccggc 255 |||||||| || ||| |||| || ||| ||||||||||||||| ||||| Sbjct: 41994453 cggctcgcgcaggacttctcgctgtcgtccaccgacctcttccactcgccggc 41994401 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 cggcgacggagccggcgctggcgc 387 ||||||||||||||| |||||||| Sbjct: 27771065 cggcgacggagccggagctggcgc 27771042
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 50.1 bits (25), Expect = 0.007 Identities = 91/113 (80%) Strand = Plus / Minus Query: 143 gaccagctgctggggttcgcgctcgtgccgctcccggacgtcgtcgccgccgagggcggc 202 |||||||| || || |||||||||||||||||| | | ||||| |||||||| |||| Sbjct: 96590 gaccagctcctcggcttcgcgctcgtgccgctcgccgccgtcgcggccgccgacggcgcg 96531 Query: 203 acgctcgcgcgcgaattcccgctctccaccaacgacctcttccactccccggc 255 |||||||| || ||| |||| || ||| ||||||||||||||| ||||| Sbjct: 96530 cggctcgcgcaggacttctcgctgtcgtccaccgacctcttccactcgccggc 96478
>dbj|AP004051.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1218_C12 Length = 105861 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 199 cggcacgctcgcgcgcgaattcccgctctccac 231 |||||||||||| ||||| |||||||||||||| Sbjct: 74956 cggcacgctcgcccgcgagttcccgctctccac 74988
>dbj|AP004266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0038F10 Length = 153929 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 199 cggcacgctcgcgcgcgaattcccgctctccac 231 |||||||||||| ||||| |||||||||||||| Sbjct: 1208 cggcacgctcgcccgcgagttcccgctctccac 1240
>dbj|AK058479.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C08, full insert sequence Length = 1686 Score = 50.1 bits (25), Expect = 0.007 Identities = 91/113 (80%) Strand = Plus / Plus Query: 143 gaccagctgctggggttcgcgctcgtgccgctcccggacgtcgtcgccgccgagggcggc 202 |||||||| || || |||||||||||||||||| | | ||||| |||||||| |||| Sbjct: 433 gaccagctcctcggcttcgcgctcgtgccgctcgccgccgtcgcggccgccgacggcgcg 492 Query: 203 acgctcgcgcgcgaattcccgctctccaccaacgacctcttccactccccggc 255 |||||||| || ||| |||| || ||| ||||||||||||||| ||||| Sbjct: 493 cggctcgcgcaggacttctcgctgtcgtccaccgacctcttccactcgccggc 545
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 201 gcacgctcgcgcgcgaattcccgctctccac 231 |||||||||| ||||| |||||||||||||| Sbjct: 13529173 gcacgctcgcccgcgagttcccgctctccac 13529143 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 gggggacgtcgacgccgcgctc 97 |||||||||||||||||||||| Sbjct: 11811155 gggggacgtcgacgccgcgctc 11811176
>gb|AC027657.2|AC027657 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040H08, complete sequence Length = 125679 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 201 gcacgctcgcgcgcgaattcccgctctccac 231 |||||||||| ||||| |||||||||||||| Sbjct: 113844 gcacgctcgcccgcgagttcccgctctccac 113814
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 201 gcacgctcgcgcgcgaattcccgctctccac 231 |||||||||| ||||| |||||||||||||| Sbjct: 13536515 gcacgctcgcccgcgagttcccgctctccac 13536485 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 gggggacgtcgacgccgcgctc 97 |||||||||||||||||||||| Sbjct: 11818495 gggggacgtcgacgccgcgctc 11818516
>ref|NM_196191.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0032N04.22), mRNA Length = 2097 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 gggggacgtcgacgccgcgctc 97 |||||||||||||||||||||| Sbjct: 270 gggggacgtcgacgccgcgctc 291
>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032N04, from chromosome 10, complete sequence Length = 159445 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 gggggacgtcgacgccgcgctc 97 |||||||||||||||||||||| Sbjct: 129216 gggggacgtcgacgccgcgctc 129237
>gb|AC092748.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0019N10, from chromosome 10, complete sequence Length = 192267 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 76 gggggacgtcgacgccgcgctc 97 |||||||||||||||||||||| Sbjct: 103164 gggggacgtcgacgccgcgctc 103143
>dbj|AK104976.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-H07, full insert sequence Length = 2293 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 gggggacgtcgacgccgcgctc 97 |||||||||||||||||||||| Sbjct: 281 gggggacgtcgacgccgcgctc 302
>dbj|AK069060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023005G23, full insert sequence Length = 2323 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 gggggacgtcgacgccgcgctc 97 |||||||||||||||||||||| Sbjct: 310 gggggacgtcgacgccgcgctc 331
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 360 acgccggcgacggagccggcg 380 ||||||||||||||||||||| Sbjct: 10360280 acgccggcgacggagccggcg 10360260
>gb|AY180263.1| Stachybotrys kampalensis strain UAMH 7746 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 528 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 cgccgcgctccgctgcgaggt 108 ||||||||||||||||||||| Sbjct: 489 cgccgcgctccgctgcgaggt 469
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 agtcggtgcgcgtcggcgtgc 71 ||||||||||||||||||||| Sbjct: 4036396 agtcggtgcgcgtcggcgtgc 4036416
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 360 acgccggcgacggagccggcg 380 ||||||||||||||||||||| Sbjct: 16833 acgccggcgacggagccggcg 16813
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 cgtgcgcgcgggggacgtcgacgcc 91 |||||| |||||||||||||||||| Sbjct: 64864 cgtgcgggcgggggacgtcgacgcc 64840
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 cggacgtcgtcgccgccgagg 197 ||||||||||||||||||||| Sbjct: 106416 cggacgtcgtcgccgccgagg 106396
>emb|AJ505006.1|POL505006 Sorangium cellulosum spiG gene (partial), spiH gene, spiI gene, spiJ gene, spiK gene, spiL gene and spiZ gene Length = 48000 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 cgtcggcgtgcgcgcggggga 81 ||||||||||||||||||||| Sbjct: 11016 cgtcggcgtgcgcgcggggga 10996
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 360 acgccggcgacggagccggcg 380 ||||||||||||||||||||| Sbjct: 73746 acgccggcgacggagccggcg 73726
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 347 gacgaggccgagaacgccggcgacg 371 |||||||||||||||||| |||||| Sbjct: 2182565 gacgaggccgagaacgcccgcgacg 2182541
>gb|AF081477.2|AF081477 Stachybotrys kampalensis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 1476 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 cgccgcgctccgctgcgaggt 108 ||||||||||||||||||||| Sbjct: 819 cgccgcgctccgctgcgaggt 799
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 360 acgccggcgacggagccggcg 380 ||||||||||||||||||||| Sbjct: 10358381 acgccggcgacggagccggcg 10358361
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 gccgccgagggcggcacgctc 208 ||||||||||||||||||||| Sbjct: 1606375 gccgccgagggcggcacgctc 1606355
>dbj|AK067646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112D16, full insert sequence Length = 2890 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 360 acgccggcgacggagccggcg 380 ||||||||||||||||||||| Sbjct: 263 acgccggcgacggagccggcg 243
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 330 ctgcgctggccgacccggacg 350 ||||||||||||||||||||| Sbjct: 2791456 ctgcgctggccgacccggacg 2791436
>dbj|AK058471.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B10, full insert sequence Length = 1364 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 360 acgccggcgacggagccggcg 380 ||||||||||||||||||||| Sbjct: 266 acgccggcgacggagccggcg 246
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 58 gcgcgtcggcgtgcgcgcgggggacgtcgacgccgcg 94 ||||| ||||||||||||| | |||||||||||||| Sbjct: 1517503 gcgcggcggcgtgcgcgcgccgcacgtcgacgccgcg 1517539 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 gcgcgtcggcgtgcgcgcgg 77 |||||||||||||||||||| Sbjct: 719337 gcgcgtcggcgtgcgcgcgg 719356
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 gcacgctcgcgcgcgaattc 220 |||||||||||||||||||| Sbjct: 45879 gcacgctcgcgcgcgaattc 45860
>ref|XM_465569.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3110 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 ggggacgtcgacgccgcgctccgc 100 |||||| ||||||||||||||||| Sbjct: 293 ggggacctcgacgccgcgctccgc 316
>ref|NM_192002.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 816 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 cggcgacggagccggcgctggcgc 387 ||||||||||||||| |||||||| Sbjct: 289 cggcgacggagccggagctggcgc 266
>gb|AY591715.1| Mus musculus clone IgKVk4-52 immunoglobulin kappa-like gene, partial sequence Length = 2721 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 440 aaccagattatgctctcggaatat 463 |||||||| ||||||||||||||| Sbjct: 746 aaccagataatgctctcggaatat 769
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ggccgagaacgccggcgacg 371 |||||||||||||||||||| Sbjct: 3560695 ggccgagaacgccggcgacg 3560676
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cgcgtcggcgtgcgcgcggg 78 |||||||||||||||||||| Sbjct: 1196733 cgcgtcggcgtgcgcgcggg 1196752 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cgagggcggcacgctcgcgc 212 |||||||||||||||||||| Sbjct: 574104 cgagggcggcacgctcgcgc 574123
>gb|AY196994.1| Streptomyces griseoruber heda cluster, complete sequence Length = 45603 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gagggcggcacgctcgcgcg 213 |||||||||||||||||||| Sbjct: 7562 gagggcggcacgctcgcgcg 7543
>gb|AC105968.14| Mus musculus chromosome 18, clone RP23-265P4, complete sequence Length = 210819 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tgtggaggaaaaccagatta 449 |||||||||||||||||||| Sbjct: 43030 tgtggaggaaaaccagatta 43011
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 148 gctgctggggttcgcgctcgtgccgctc 175 |||||| | ||||||||||||||||||| Sbjct: 2627934 gctgctcgcgttcgcgctcgtgccgctc 2627961 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gcgcgtcggcgtgcgcgcgg 77 |||||||||||||||||||| Sbjct: 1098313 gcgcgtcggcgtgcgcgcgg 1098294
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 cgagggcggcacgctcgcgc 212 |||||||||||||||||||| Sbjct: 3200666 cgagggcggcacgctcgcgc 3200647 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 cgcgtcggcgtgcgcgcggg 78 |||||||||||||||||||| Sbjct: 2319352 cgcgtcggcgtgcgcgcggg 2319333
>gb|BC052732.1| Mus musculus kinesin family member 3C, mRNA (cDNA clone IMAGE:6816501), **** WARNING: chimeric clone **** Length = 2729 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 agaattacctgcaggaccag 148 |||||||||||||||||||| Sbjct: 1385 agaattacctgcaggaccag 1404
>emb|Z81484.1|CEC47A10 Caenorhabditis elegans Cosmid C47A10, complete sequence Length = 46423 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 gtcgacgccgcgctccgctg 102 |||||||||||||||||||| Sbjct: 34097 gtcgacgccgcgctccgctg 34116
>gb|BC053053.1| Mus musculus cDNA clone IMAGE:5709334, **** WARNING: chimeric clone **** Length = 4388 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 agaattacctgcaggaccag 148 |||||||||||||||||||| Sbjct: 2170 agaattacctgcaggaccag 2189
>ref|NM_008445.2| Mus musculus kinesin family member 3C (Kif3c), mRNA Length = 6849 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 agaattacctgcaggaccag 148 |||||||||||||||||||| Sbjct: 2228 agaattacctgcaggaccag 2247
>gb|BC062648.1| Mus musculus cDNA clone IMAGE:6826103, containing frame-shift errors Length = 4119 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 agaattacctgcaggaccag 148 |||||||||||||||||||| Sbjct: 1903 agaattacctgcaggaccag 1922
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 cctgcaggaccagctgctgg 155 |||||||||||||||||||| Sbjct: 1111075 cctgcaggaccagctgctgg 1111056 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ctgcgctggccgacccggac 349 |||||||||||||||||||| Sbjct: 783807 ctgcgctggccgacccggac 783826
>ref|XM_505267.1| Yarrowia lipolytica CLIB122, YALI0F10945g predicted mRNA Length = 3894 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 tggatgctcagccgggtcaa 129 |||||||||||||||||||| Sbjct: 2060 tggatgctcagccgggtcaa 2041
>emb|X75963.1|VVCHI V.vinifera CHI mRNA for chalcone isomerase Length = 979 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ctccaccaacgacctcttcc 245 |||||||||||||||||||| Sbjct: 86 ctccaccaacgacctcttcc 105
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 gctggggttcgcgctcgtgccgct 174 ||||| |||||||||||||||||| Sbjct: 3074201 gctggtgttcgcgctcgtgccgct 3074224
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gtgcgcgtcggcgtgcgcgc 75 |||||||||||||||||||| Sbjct: 329117 gtgcgcgtcggcgtgcgcgc 329136
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gtgcgcgtcggcgtgcgcgc 75 |||||||||||||||||||| Sbjct: 236956 gtgcgcgtcggcgtgcgcgc 236975
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gtgcgcgtcggcgtgcgcgc 75 |||||||||||||||||||| Sbjct: 104227 gtgcgcgtcggcgtgcgcgc 104246
>gb|AC153615.4| Mus musculus 6 BAC RP23-24I14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 183030 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 440 aaccagattatgctctcggaatat 463 |||||||| ||||||||||||||| Sbjct: 78017 aaccagataatgctctcggaatat 77994
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gcgcgtcggcgtgcgcgcgg 77 |||||||||||||||||||| Sbjct: 2415803 gcgcgtcggcgtgcgcgcgg 2415784 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 148 gctgctggggttcgcgctcgtgccgctc 175 |||||| | ||||||||||||||||||| Sbjct: 807970 gctgctcgcgttcgcgctcgtgccgctc 807997
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 cgagggcggcacgctcgcgc 212 |||||||||||||||||||| Sbjct: 2930532 cgagggcggcacgctcgcgc 2930513 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cgcgtcggcgtgcgcgcggg 78 |||||||||||||||||||| Sbjct: 2065739 cgcgtcggcgtgcgcgcggg 2065758
>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06, complete sequence Length = 148023 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 360 acgccggcgacggagccggcgctggcgc 387 ||||||||| ||| |||||||||||||| Sbjct: 56146 acgccggcgccggcgccggcgctggcgc 56119
>emb|AJ627256.1| Oryza sativa (indica cultivar-group) partial mRNA for putative IAA8 auxin regulated transcriptional repressor (IAA8 gene) Length = 803 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 cggcgacggagccggcgctggcgc 387 ||||||||||||||| |||||||| Sbjct: 276 cggcgacggagccggagctggcgc 253
>gb|AC160138.2| Mus musculus BAC clone RP23-83G6 from chromosome 12, complete sequence Length = 223906 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 agaattacctgcaggaccag 148 |||||||||||||||||||| Sbjct: 107581 agaattacctgcaggaccag 107562
>gb|U82965.2|STU82965 Streptomcyes toyocaensis strain NRRL 15009 biosynthetic gene cluster A47934, complete sequence Length = 69301 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 tcgtcgccgccgagggcggc 202 |||||||||||||||||||| Sbjct: 44138 tcgtcgccgccgagggcggc 44157
>dbj|AK220283.1| Mus musculus mRNA for mKIAA4058 protein Length = 4144 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 agaattacctgcaggaccag 148 |||||||||||||||||||| Sbjct: 1953 agaattacctgcaggaccag 1972
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gagccggcgctggcgcaggg 391 |||||||||||||||||||| Sbjct: 2930955 gagccggcgctggcgcaggg 2930974
>gb|AE005864.1| Caulobacter crescentus CB15 section 190 of 359 of the complete genome Length = 8962 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 cgccggcgacggagccggcg 380 |||||||||||||||||||| Sbjct: 7782 cgccggcgacggagccggcg 7763
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 50 cagtcggtgcgcgtcggcgtgcgcgcggggga 81 ||||| |||||||||||| | ||||||||||| Sbjct: 3514415 cagtccgtgcgcgtcggctttcgcgcggggga 3514384
>dbj|AK133649.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330428K09 product:kinesin family member 3C, full insert sequence Length = 2306 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 agaattacctgcaggaccag 148 |||||||||||||||||||| Sbjct: 2210 agaattacctgcaggaccag 2229
>dbj|AK147572.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1080M04 product:kinesin family member 3C, full insert sequence Length = 6641 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 agaattacctgcaggaccag 148 |||||||||||||||||||| Sbjct: 2030 agaattacctgcaggaccag 2049
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 cggcgacggagccggcgctggcgc 387 ||||||||| |||||||||||||| Sbjct: 88525 cggcgacggcgccggcgctggcgc 88548
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 gcgcgtcggcgtgcgcgcgg 77 |||||||||||||||||||| Sbjct: 318682 gcgcgtcggcgtgcgcgcgg 318701
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 360 acgccggcgacggagccggcgctggcgc 387 ||||||||| ||| |||||||||||||| Sbjct: 34850033 acgccggcgccggcgccggcgctggcgc 34850006
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gcgcgtcggcgtgcgcgcgg 77 |||||||||||||||||||| Sbjct: 22950161 gcgcgtcggcgtgcgcgcgg 22950142
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 ggggacgtcgacgccgcgctccgc 100 |||||| ||||||||||||||||| Sbjct: 16019398 ggggacctcgacgccgcgctccgc 16019375
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ggacgtcgacgccgcgctcc 98 |||||||||||||||||||| Sbjct: 5059182 ggacgtcgacgccgcgctcc 5059201
>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 cggcgacggagccggcgctggcgc 387 ||||||||||||||| |||||||| Sbjct: 63120 cggcgacggagccggagctggcgc 63097
>dbj|AK208475.1| Mus musculus cDNA, clone:Y2G0111H21, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000065175, based on BLAT search Length = 337 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 agaattacctgcaggaccag 148 |||||||||||||||||||| Sbjct: 274 agaattacctgcaggaccag 293
>dbj|AK181663.1| Mus musculus cDNA, clone:Y0G0118P15, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000065175, based on BLAT search Length = 249 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 agaattacctgcaggaccag 148 |||||||||||||||||||| Sbjct: 117 agaattacctgcaggaccag 136
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502H06 Length = 165630 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gcgcgtcggcgtgcgcgcgg 77 |||||||||||||||||||| Sbjct: 124983 gcgcgtcggcgtgcgcgcgg 124964
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652A05 Length = 150455 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gcgcgtcggcgtgcgcgcgg 77 |||||||||||||||||||| Sbjct: 16646 gcgcgtcggcgtgcgcgcgg 16627
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ggtgcgcgtcggcgtgcgcg 74 |||||||||||||||||||| Sbjct: 6723566 ggtgcgcgtcggcgtgcgcg 6723585
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 cgccgccgagggcggcacgc 206 |||||||||||||||||||| Sbjct: 3847548 cgccgccgagggcggcacgc 3847567
>dbj|AP004852.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1371_D04 Length = 105468 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 ggggacgtcgacgccgcgctccgc 100 |||||| ||||||||||||||||| Sbjct: 50333 ggggacctcgacgccgcgctccgc 50310
>dbj|AP004787.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0403C01 Length = 145635 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 ggggacgtcgacgccgcgctccgc 100 |||||| ||||||||||||||||| Sbjct: 17632 ggggacctcgacgccgcgctccgc 17609
>dbj|AK120602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K24, full insert sequence Length = 3111 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 ggggacgtcgacgccgcgctccgc 100 |||||| ||||||||||||||||| Sbjct: 294 ggggacctcgacgccgcgctccgc 317
>emb|AJ301876.1|RER301876 Rhodococcus erythropolis alkB3 gene for putative alkane-1-monooxygenase 3 and partial ORF1 DNA for hypothetical protein, strain NRRL B-16531 Length = 2291 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 cccggacgtcgtcgccgccg 194 |||||||||||||||||||| Sbjct: 1750 cccggacgtcgtcgccgccg 1769
>dbj|AK106121.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E11, full insert sequence Length = 1231 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 cggcgacggagccggcgctggcgc 387 ||||||||||||||| |||||||| Sbjct: 376 cggcgacggagccggagctggcgc 353
>dbj|AK102396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092H03, full insert sequence Length = 971 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 cggcgacggagccggcgctggcgc 387 ||||||||||||||| |||||||| Sbjct: 291 cggcgacggagccggagctggcgc 268
>dbj|AK062590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-G10, full insert sequence Length = 1663 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 gcgcgtcggcgtgcgcgcgg 77 |||||||||||||||||||| Sbjct: 1277 gcgcgtcggcgtgcgcgcgg 1296
>dbj|AK061495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C06, full insert sequence Length = 1140 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 cggcgacggagccggcgctggcgc 387 ||||||||||||||| |||||||| Sbjct: 302 cggcgacggagccggagctggcgc 279
>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete sequence Length = 115564 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 360 acgccggcgacggagccggcgctggcgc 387 ||||||||| ||| |||||||||||||| Sbjct: 29638 acgccggcgccggcgccggcgctggcgc 29611
>emb|AL732354.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0901F07, complete sequence Length = 110682 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 360 acgccggcgacggagccggcgctggcgc 387 ||||||||| ||| |||||||||||||| Sbjct: 103714 acgccggcgccggcgccggcgctggcgc 103687
>dbj|AB076895.1| Ciona intestinalis Ci-calumenin mRNA for calumenin homologue, complete cds Length = 1740 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 atcttgtggaggaaaaccag 445 |||||||||||||||||||| Sbjct: 412 atcttgtggaggaaaaccag 431
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 gccgccgagggcggcacgctcgcgcgcg 215 |||||||||| |||||||||||| |||| Sbjct: 4234319 gccgccgaggtcggcacgctcgcccgcg 4234346
>gb|AF013116.1|AF013116 Mus musculus kinesin motor protein KIF3C mRNA, complete cds Length = 4017 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 agaattacctgcaggaccag 148 |||||||||||||||||||| Sbjct: 1804 agaattacctgcaggaccag 1823
>emb|AM113472.1| Micromonospora sp. ML1 thiocoraline gene cluster Length = 64650 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 338 gccgacccggacgaggccgagaacgccggcga 369 |||||| ||| |||| |||||||||||||||| Sbjct: 33193 gccgacgcggtcgagcccgagaacgccggcga 33162
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 tggatgctcagccgggtcaa 129 |||||||||||||||||||| Sbjct: 1460228 tggatgctcagccgggtcaa 1460247
>dbj|D50308.1| Lysobacter lactamgenus DNA for alpha-aminoadipyl-cysteinyl-valine synthetase, complete cds Length = 11401 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 tcggcgtgcgcgcgggggacgtcg 86 ||||||||||||||| |||||||| Sbjct: 2567 tcggcgtgcgcgcggcggacgtcg 2590
>dbj|D38215.1|STMTCR3 Streptomyces aureofaciens self-defense gene tcr3, complete cds Length = 2810 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ggccgacccggacgaggccg 356 |||||||||||||||||||| Sbjct: 1871 ggccgacccggacgaggccg 1890 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,863,350 Number of Sequences: 3902068 Number of extensions: 2863350 Number of successful extensions: 68368 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63268 Number of HSP's gapped (non-prelim): 5094 length of query: 495 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 473 effective length of database: 17,147,199,772 effective search space: 8110625492156 effective search space used: 8110625492156 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
