ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd1h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK101299.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
2ref|XM_469739.1| Oryza sativa (japonica cultivar-group), mRNA 168 1e-38
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 151 3e-33
4gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genom... 151 3e-33
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
6gb|AY106497.1| Zea mays PCO135122 mRNA sequence 64 6e-07
7emb|AL133282.15| Human DNA sequence from clone RP11-264C15 on ch... 48 0.036
8dbj|AK122046.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.14
9gb|AF284037.1| Streptomyces ansochromogenes putative 2-nitroprop... 44 0.56
10dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 44 0.56
11gb|AC153729.1| Mus musculus BAC RP23-88C11 (Roswell Park Cancer... 42 2.2
12gb|AC018489.7| Drosophila melanogaster clone BACR19G19, complete... 42 2.2
13gb|AC022349.3| Drosophila melanogaster clone BACR33D04, complete... 42 2.2
14gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 42 2.2
15gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 42 2.2
16gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 42 2.2
17ref|NM_005427.1| Homo sapiens tumor protein p73 (TP73), mRNA 42 2.2
18emb|AL136528.11| Human DNA sequence from clone RP5-1092A11 on ch... 42 2.2
19emb|CR599961.1| full-length cDNA clone CS0DD001YD24 of Neuroblas... 42 2.2
20gb|AY040829.1| Homo sapiens DN p73 gamma (TP73) mRNA, complete c... 42 2.2
21gb|AY040828.1| Homo sapiens DN p73 beta (TP73) mRNA, complete cd... 42 2.2
22gb|AY040827.1| Homo sapiens DN p73 alpha (TP73) mRNA, complete c... 42 2.2
23ref|NM_132950.1| Drosophila melanogaster CG13002-RA (CG13002), mRNA 42 2.2
24ref|NM_132831.1| Drosophila melanogaster CG8184-RB (CG8184), mRNA 42 2.2
25gb|AC092401.1|AC092401 Drosophila melanogaster, chromosome X, re... 42 2.2
26gb|AC013431.9|AC013431 Drosophila melanogaster, chromosome X, re... 42 2.2
27emb|BX890556.7| Zebrafish DNA sequence from clone CH211-243O12, ... 42 2.2
28gb|AF077621.1|HSP73S06 Homo sapiens p73 gene, exons 6, 7 and 8 42 2.2
29emb|BX321894.8| Zebrafish DNA sequence from clone DKEYP-56B7 in ... 42 2.2
30emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 2.2
31emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 42 2.2
32gb|AC102839.24| Mus musculus chromosome 5, clone RP24-343D8, com... 42 2.2
33gb|AF079089.1|HSP73G08 Homo sapiens p73 (TP73) gene, exon 9 42 2.2
34gb|AE003503.4| Drosophila melanogaster chromosome X, section 55 ... 42 2.2
35gb|AE003500.4| Drosophila melanogaster chromosome X, section 52 ... 42 2.2
36emb|Y11416.1|HSY11416 H.sapiens mRNA for P73 42 2.2
37dbj|AB055066.1| Homo sapiens hDNp73B mRNA for deltaN p73 beta, c... 42 2.2
38dbj|AB055065.1| Homo sapiens hDNp73A mRNA for deltaN p73 alpha, ... 42 2.2
39gb|AC168276.3| Mus musculus BAC RP24-485I12 (Roswell Park Cance... 40 8.7
40gb|AC115878.12| Mus musculus chromosome 15, clone RP24-358G9, co... 40 8.7
41gb|AC120922.4| Rattus norvegicus 9 BAC CH230-104J1 (Children's H... 40 8.7
42gb|AC126280.4| Mus musculus BAC clone RP23-10P23 from 16, comple... 40 8.7
43gb|AC113064.8| Mus musculus chromosome 5, clone RP23-262H7, comp... 40 8.7
44gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 8.7
45emb|AL391241.21| Human DNA sequence from clone RP13-158L7 on chr... 40 8.7
46gb|AC159978.4| Mus musculus chromosome 15, clone RP24-173F4, com... 40 8.7
47emb|AL662843.11| Mouse DNA sequence from clone RP23-411E22 on ch... 40 8.7
48emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4,... 40 8.7
49gb|U77166.1|PMU77166 Porphyrio martinicus cytochrome-b gene, mit... 40 8.7
50gb|AC092531.16| Rattus norvegicus clone rp32-475b19, complete se... 40 8.7
51gb|AC092530.35| Rattus norvegicus clone rp32-28p17, complete seq... 40 8.7
52dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
53dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
54gb|AC154659.2| Mus musculus BAC clone RP24-269K6 from chromosome... 40 8.7
55dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 40 8.7
56dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.7
57gb|AE004876.1| Pseudomonas aeruginosa PAO1, section 437 of 529 o... 40 8.7
58gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 8.7
59dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 8.7
60dbj|BS000227.1| Pan troglodytes chromosome 22 clone:PTB-059D22, ... 40 8.7
61dbj|AK068351.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.7
62dbj|AK068058.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.7
63dbj|AP001745.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.7
64gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 8.7
65gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.7
66emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119... 40 8.7
67dbj|AP001622.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 8.7
68dbj|AP001621.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 8.7 
>dbj|AK101299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033J09, full
           insert sequence
          Length = 2658

 Score =  174 bits (88), Expect = 2e-40
 Identities = 247/298 (82%), Gaps = 9/298 (3%)
 Strand = Plus / Plus

                                                                       
Query: 346 gtggacaggtcgataacgcccctgctccaggaggccatggaccccaactttttctaccag 405
           |||||||||||||| || |||||||||||||||||| || |  ||||| | || || |||
Sbjct: 438 gtggacaggtcgatcactcccctgctccaggaggccgtgaatgccaacatcttgtatcag 497

                                                                       
Query: 406 cccaatggatac---ccctcaccggcctactactaccctagcggttatgatggctctacc 462
            ||||||||||    ||||||   || || ||||| ||||  |||||||| |||||  ||
Sbjct: 498 accaatggatatggaccctca---gcatattactatcctactggttatgacggctcagcc 554

                                                                       
Query: 463 aatgagtgggactctaggtatgctggtcatgaaggaatggaagtgccccagagtgtgtat 522
           ||||| |||||||| || |||||||  ||||| |||| |||  |||| |  ||||| |||
Sbjct: 555 aatgaatgggactccagatatgctgcccatgatggaacggagatgcctcctagtgtttat 614

                                                                       
Query: 523 ggtgacatgtaccatggatatggttatgctccctatggcccgtatccttcaggttctcct 582
           |||||||||||   ||||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct: 615 ggtgacatgta---tggatatggctatgctccctatggcccatatccttctggttctcct 671

                                                                     
Query: 583 gtcccaactgttgggcatgacgggcaatcatacggcacacagcaatatcagtaccctg 640
           |||||||||||||||||||| || || ||||||||| ||||||| || ||||||||||
Sbjct: 672 gtcccaactgttgggcatgatggccagtcatacggcgcacagcattaccagtaccctg 729



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 6  cctccccctcccctagggtttatcc 30
          |||||||||| ||||||||||||||
Sbjct: 68 cctccccctctcctagggtttatcc 92
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>ref|XM_469739.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2463

 Score =  168 bits (85), Expect = 1e-38
 Identities = 249/301 (82%), Gaps = 12/301 (3%)
 Strand = Plus / Plus

                                                                       
Query: 346 gtggacaggtcgataacgcccctgctccaggaggccatggaccccaactttttctaccag 405
           |||||||||||||| || |||||||||||||||||| || |  ||||| | || || |||
Sbjct: 244 gtggacaggtcgatcactcccctgctccaggaggccgtgaatgccaacatcttgtatcag 303

                                                                       
Query: 406 cccaatggatac---ccctcaccggcctactactaccctagcggttatgatggctctacc 462
            ||||||||||    ||||||   || || ||||| ||||  |||||||| |||||  ||
Sbjct: 304 accaatggatatggaccctca---gcatattactatcctactggttatgacggctcagcc 360

                                                                       
Query: 463 aatgagtgggactctaggtatgctggtcatgaaggaatggaagtgcccc---agagtgtg 519
           ||||| |||||||| || |||||||  ||||| |||| |||  |||| |   ||||||| 
Sbjct: 361 aatgaatgggactccagatatgctgcccatgatggaacggagatgcctcctcagagtgtt 420

                                                                       
Query: 520 tatggtgacatgtaccatggatatggttatgctccctatggcccgtatccttcaggttct 579
           ||||||||||||||   ||||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 421 tatggtgacatgta---tggatatggctatgctccctatggcccatatccttctggttct 477

                                                                       
Query: 580 cctgtcccaactgttgggcatgacgggcaatcatacggcacacagcaatatcagtaccct 639
           ||||||||||||||||||||||| || || ||||||||| ||||||| || |||||||||
Sbjct: 478 cctgtcccaactgttgggcatgatggccagtcatacggcgcacagcattaccagtaccct 537

            
Query: 640 g 640
           |
Sbjct: 538 g 538
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  151 bits (76), Expect = 3e-33
 Identities = 117/130 (90%), Gaps = 3/130 (2%)
 Strand = Plus / Plus

                                                                            
Query: 511      cagagtgtgtatggtgacatgtaccatggatatggttatgctccctatggcccgtatcct 570
                |||||||| ||||||||||||||   ||||||||| ||||||||||||||||| ||||||
Sbjct: 30486506 cagagtgtttatggtgacatgta---tggatatggctatgctccctatggcccatatcct 30486562

                                                                            
Query: 571      tcaggttctcctgtcccaactgttgggcatgacgggcaatcatacggcacacagcaatat 630
                || ||||||||||||||||||||||||||||| || || ||||||||| ||||||| || 
Sbjct: 30486563 tctggttctcctgtcccaactgttgggcatgatggccagtcatacggcgcacagcattac 30486622

                          
Query: 631      cagtaccctg 640
                ||||||||||
Sbjct: 30486623 cagtaccctg 30486632



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                    
Query: 346      gtggacaggtcgataacgcccctgctccaggaggcc 381
                |||||||||||||| || ||||||||||||||||||
Sbjct: 30486031 gtggacaggtcgatcactcccctgctccaggaggcc 30486066



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 6        cctccccctcccctagggtttatcc 30
                |||||||||| ||||||||||||||
Sbjct: 30485324 cctccccctctcctagggtttatcc 30485348
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>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete
             sequence
          Length = 139872

 Score =  151 bits (76), Expect = 3e-33
 Identities = 117/130 (90%), Gaps = 3/130 (2%)
 Strand = Plus / Plus

                                                                         
Query: 511   cagagtgtgtatggtgacatgtaccatggatatggttatgctccctatggcccgtatcct 570
             |||||||| ||||||||||||||   ||||||||| ||||||||||||||||| ||||||
Sbjct: 18079 cagagtgtttatggtgacatgta---tggatatggctatgctccctatggcccatatcct 18135

                                                                         
Query: 571   tcaggttctcctgtcccaactgttgggcatgacgggcaatcatacggcacacagcaatat 630
             || ||||||||||||||||||||||||||||| || || ||||||||| ||||||| || 
Sbjct: 18136 tctggttctcctgtcccaactgttgggcatgatggccagtcatacggcgcacagcattac 18195

                       
Query: 631   cagtaccctg 640
             ||||||||||
Sbjct: 18196 cagtaccctg 18205



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 346   gtggacaggtcgataacgcccctgctccaggaggcc 381
             |||||||||||||| || ||||||||||||||||||
Sbjct: 17604 gtggacaggtcgatcactcccctgctccaggaggcc 17639



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 6     cctccccctcccctagggtttatcc 30
             |||||||||| ||||||||||||||
Sbjct: 16897 cctccccctctcctagggtttatcc 16921
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  151 bits (76), Expect = 3e-33
 Identities = 117/130 (90%), Gaps = 3/130 (2%)
 Strand = Plus / Plus

                                                                            
Query: 511      cagagtgtgtatggtgacatgtaccatggatatggttatgctccctatggcccgtatcct 570
                |||||||| ||||||||||||||   ||||||||| ||||||||||||||||| ||||||
Sbjct: 30577928 cagagtgtttatggtgacatgta---tggatatggctatgctccctatggcccatatcct 30577984

                                                                            
Query: 571      tcaggttctcctgtcccaactgttgggcatgacgggcaatcatacggcacacagcaatat 630
                || ||||||||||||||||||||||||||||| || || ||||||||| ||||||| || 
Sbjct: 30577985 tctggttctcctgtcccaactgttgggcatgatggccagtcatacggcgcacagcattac 30578044

                          
Query: 631      cagtaccctg 640
                ||||||||||
Sbjct: 30578045 cagtaccctg 30578054



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                    
Query: 346      gtggacaggtcgataacgcccctgctccaggaggcc 381
                |||||||||||||| || ||||||||||||||||||
Sbjct: 30577453 gtggacaggtcgatcactcccctgctccaggaggcc 30577488



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 6        cctccccctcccctagggtttatcc 30
                |||||||||| ||||||||||||||
Sbjct: 30576746 cctccccctctcctagggtttatcc 30576770
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>gb|AY106497.1| Zea mays PCO135122 mRNA sequence
          Length = 503

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                       
Query: 346 gtggacaggtcgataacgcccctgctccaggaggccatggaccccaactttttctaccag 405
           ||||||||||||||||| || || || |||||||||||||| || || || |||||||||
Sbjct: 408 gtggacaggtcgataacacctctactacaggaggccatggatcctaatttcttctaccag 467

               
Query: 406 ccca 409
           ||||
Sbjct: 468 ccca 471
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>emb|AL133282.15| Human DNA sequence from clone RP11-264C15 on chromosome 9q32-34.11
             Contains part of the ASTN2 gene for astrotactin2
             (KIAA0634) and a novel gene, complete sequence
          Length = 130526

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 492   tgaaggaatggaagtgccccagag 515
             ||||||||||||||||||||||||
Sbjct: 27723 tgaaggaatggaagtgccccagag 27700
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>dbj|AK122046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114A14, full
           insert sequence
          Length = 779

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 249 gaagaaggatgccgccggcgccgacgcggcc 279
           ||||||||| ||||||| |||||||||||||
Sbjct: 524 gaagaaggacgccgccgccgccgacgcggcc 554
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>gb|AF284037.1| Streptomyces ansochromogenes putative 2-nitropropane dioxygenase
           (2-npdl) gene, complete cds
          Length = 1350

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 262 gccggcgccgacgcggcccagc 283
           ||||||||||||||||||||||
Sbjct: 865 gccggcgccgacgcggcccagc 886
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 256     gatgccgccggcgccgacgcgg 277
               ||||||||||||||||||||||
Sbjct: 3868909 gatgccgccggcgccgacgcgg 3868888
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>gb|AC153729.1| Mus musculus  BAC RP23-88C11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 250801

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 5      ccctccccctcccctagggtt 25
              |||||||||||||||||||||
Sbjct: 168226 ccctccccctcccctagggtt 168246
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>gb|AC018489.7| Drosophila melanogaster clone BACR19G19, complete sequence
          Length = 179077

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 222   ggacatgcagaagctgtccct 242
             |||||||||||||||||||||
Sbjct: 79216 ggacatgcagaagctgtccct 79236
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>gb|AC022349.3| Drosophila melanogaster clone BACR33D04, complete sequence
          Length = 177576

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 222  ggacatgcagaagctgtccct 242
            |||||||||||||||||||||
Sbjct: 5580 ggacatgcagaagctgtccct 5600
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 259     gccgccggcgccgacgcggcccagc 283
               |||||||||||||||||||| ||||
Sbjct: 1128089 gccgccggcgccgacgcggcgcagc 1128113
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 334     gtggagccgcatgtggacagg 354
               |||||||||||||||||||||
Sbjct: 3107164 gtggagccgcatgtggacagg 3107184
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 255    ggatgccgccggcgccgacgcggcc 279
              ||||||||||||||||||| |||||
Sbjct: 714191 ggatgccgccggcgccgactcggcc 714215
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>ref|NM_005427.1| Homo sapiens tumor protein p73 (TP73), mRNA
          Length = 2234

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  gcccccctgccgtccccgccc 128
            |||||||||||||||||||||
Sbjct: 1108 gcccccctgccgtccccgccc 1128
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>emb|AL136528.11| Human DNA sequence from clone RP5-1092A11 on chromosome 1p36.2-36.33
             Contains the 5' end of the gene for a novel protein
             (FLJ32825), a novel gene (KIAA0495), two novel genes, the
             TP73 gene for tumor protein p73, the 5' end of the WDR8
             gene for WD repeat domain 8 and five CpG islands, complete
             sequence
          Length = 138941

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 108   gcccccctgccgtccccgccc 128
             |||||||||||||||||||||
Sbjct: 41090 gcccccctgccgtccccgccc 41070
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>emb|CR599961.1| full-length cDNA clone CS0DD001YD24 of Neuroblastoma Cot
            50-normalized of Homo sapiens (human)
          Length = 1889

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  gcccccctgccgtccccgccc 128
            |||||||||||||||||||||
Sbjct: 1092 gcccccctgccgtccccgccc 1112
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>gb|AY040829.1| Homo sapiens DN p73 gamma (TP73) mRNA, complete cds, alternatively
            spliced
          Length = 2062

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  gcccccctgccgtccccgccc 128
            |||||||||||||||||||||
Sbjct: 1085 gcccccctgccgtccccgccc 1105
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>gb|AY040828.1| Homo sapiens DN p73 beta (TP73) mRNA, complete cds, alternatively
            spliced
          Length = 2117

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  gcccccctgccgtccccgccc 128
            |||||||||||||||||||||
Sbjct: 1085 gcccccctgccgtccccgccc 1105
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>gb|AY040827.1| Homo sapiens DN p73 alpha (TP73) mRNA, complete cds, alternatively
            spliced
          Length = 2211

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  gcccccctgccgtccccgccc 128
            |||||||||||||||||||||
Sbjct: 1085 gcccccctgccgtccccgccc 1105
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>ref|NM_132950.1| Drosophila melanogaster CG13002-RA (CG13002), mRNA
          Length = 639

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 222 ggacatgcagaagctgtccct 242
           |||||||||||||||||||||
Sbjct: 399 ggacatgcagaagctgtccct 379
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>ref|NM_132831.1| Drosophila melanogaster CG8184-RB (CG8184), mRNA
          Length = 15782

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 362  cgcccctgctccaggaggccatgga 386
            ||||| |||||||||||||||||||
Sbjct: 6113 cgcccgtgctccaggaggccatgga 6137
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>gb|AC092401.1|AC092401 Drosophila melanogaster, chromosome X, region 13E-13F, BAC clone
             BACR25C18, complete sequence
          Length = 185200

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 362   cgcccctgctccaggaggccatgga 386
             ||||| |||||||||||||||||||
Sbjct: 32443 cgcccgtgctccaggaggccatgga 32467
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>gb|AC013431.9|AC013431 Drosophila melanogaster, chromosome X, region 13E-13F, BAC clone
             BACR22H11, complete sequence
          Length = 191558

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 362   cgcccctgctccaggaggccatgga 386
             ||||| |||||||||||||||||||
Sbjct: 11173 cgcccgtgctccaggaggccatgga 11197
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>emb|BX890556.7| Zebrafish DNA sequence from clone CH211-243O12, complete sequence
          Length = 73520

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 420   ctcaccggcctactactaccc 440
             |||||||||||||||||||||
Sbjct: 15359 ctcaccggcctactactaccc 15339
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>gb|AF077621.1|HSP73S06 Homo sapiens p73 gene, exons 6, 7 and 8
          Length = 1358

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  gcccccctgccgtccccgccc 128
            |||||||||||||||||||||
Sbjct: 1133 gcccccctgccgtccccgccc 1153
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>emb|BX321894.8| Zebrafish DNA sequence from clone DKEYP-56B7 in linkage group 19,
              complete sequence
          Length = 181789

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 420    ctcaccggcctactactaccc 440
              |||||||||||||||||||||
Sbjct: 136082 ctcaccggcctactactaccc 136102
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 188     acgccggcaatgggcagggcgcggg 212
               ||||||||||||| |||||||||||
Sbjct: 2052764 acgccggcaatggccagggcgcggg 2052740
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 262     gccggcgccgacgcggcccag 282
               |||||||||||||||||||||
Sbjct: 1503841 gccggcgccgacgcggcccag 1503821
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>gb|AC102839.24| Mus musculus chromosome 5, clone RP24-343D8, complete sequence
          Length = 196090

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     gctaccctccccctcccctag 21
             |||||||||||||||||||||
Sbjct: 54048 gctaccctccccctcccctag 54028
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>gb|AF079089.1|HSP73G08 Homo sapiens p73 (TP73) gene, exon 9
          Length = 227

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 108 gcccccctgccgtccccgccc 128
           |||||||||||||||||||||
Sbjct: 60  gcccccctgccgtccccgccc 80
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>gb|AE003503.4| Drosophila melanogaster chromosome X, section 55 of 74 of the complete
              sequence
          Length = 300468

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 222    ggacatgcagaagctgtccct 242
              |||||||||||||||||||||
Sbjct: 252809 ggacatgcagaagctgtccct 252789
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>gb|AE003500.4| Drosophila melanogaster chromosome X, section 52 of 74 of the complete
             sequence
          Length = 303344

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 362   cgcccctgctccaggaggccatgga 386
             ||||| |||||||||||||||||||
Sbjct: 15163 cgcccgtgctccaggaggccatgga 15187
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>emb|Y11416.1|HSY11416 H.sapiens mRNA for P73
          Length = 2234

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  gcccccctgccgtccccgccc 128
            |||||||||||||||||||||
Sbjct: 1108 gcccccctgccgtccccgccc 1128
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>dbj|AB055066.1| Homo sapiens hDNp73B mRNA for deltaN p73 beta, complete cds
          Length = 2117

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  gcccccctgccgtccccgccc 128
            |||||||||||||||||||||
Sbjct: 1085 gcccccctgccgtccccgccc 1105
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>dbj|AB055065.1| Homo sapiens hDNp73A mRNA for deltaN p73 alpha, complete cds
          Length = 2211

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  gcccccctgccgtccccgccc 128
            |||||||||||||||||||||
Sbjct: 1085 gcccccctgccgtccccgccc 1105
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>gb|AC168276.3| Mus musculus  BAC RP24-485I12 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 186675

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      ctaccctccccctcccctag 21
              ||||||||||||||||||||
Sbjct: 111264 ctaccctccccctcccctag 111283
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>gb|AC115878.12| Mus musculus chromosome 15, clone RP24-358G9, complete sequence
          Length = 173049

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 570    ttcaggttctcctgtcccaa 589
              ||||||||||||||||||||
Sbjct: 170665 ttcaggttctcctgtcccaa 170684
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>gb|AC120922.4| Rattus norvegicus 9 BAC CH230-104J1 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 256354

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 494    aaggaatggaagtgccccagagtg 517
              |||||||||||| |||||||||||
Sbjct: 221214 aaggaatggaagagccccagagtg 221191
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>gb|AC126280.4| Mus musculus BAC clone RP23-10P23 from 16, complete sequence
          Length = 211237

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 381   catggaccccaactttttctacca 404
             ||||| ||||||||||||||||||
Sbjct: 85457 catggcccccaactttttctacca 85480
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>gb|AC113064.8| Mus musculus chromosome 5, clone RP23-262H7, complete sequence
          Length = 176176

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 481   tatgctggtcatgaaggaat 500
             ||||||||||||||||||||
Sbjct: 77238 tatgctggtcatgaaggaat 77257
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 198     tgggcagggcgcggggcttc 217
               ||||||||||||||||||||
Sbjct: 1147987 tgggcagggcgcggggcttc 1148006
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>emb|AL391241.21| Human DNA sequence from clone RP13-158L7 on chromosome X Contains a
            zinc finger pseudogene, heat shock 70kD protein 8 (HSPA8)
            pseudogene and a nucleophosmin (nucleolar phosphoprotein
            B23, numatrin (NPM1)) pseudogene, complete sequence
          Length = 157860

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 229  cagaagctgtccctggaggg 248
            ||||||||||||||||||||
Sbjct: 5942 cagaagctgtccctggaggg 5923
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>gb|AC159978.4| Mus musculus chromosome 15, clone RP24-173F4, complete sequence
          Length = 113570

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 570   ttcaggttctcctgtcccaa 589
             ||||||||||||||||||||
Sbjct: 48141 ttcaggttctcctgtcccaa 48160
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>emb|AL662843.11| Mouse DNA sequence from clone RP23-411E22 on chromosome 11 Contains the
             3' end of the Col23a1 gene for procollagen (type XXIII,
             alpha 1), the 5' end of a novel gene and a CpG island,
             complete sequence
          Length = 155917

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   gcttcacgtggacatgcaga 232
             ||||||||||||||||||||
Sbjct: 80645 gcttcacgtggacatgcaga 80664
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>emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14,
             complete sequence
          Length = 158312

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     gctaccctccccctcccctagggt 24
             ||||||| ||||||||||||||||
Sbjct: 77056 gctacccaccccctcccctagggt 77033
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>gb|U77166.1|PMU77166 Porphyrio martinicus cytochrome-b gene, mitochondrial gene encoding
           mitochondrial protein, partial cds
          Length = 246

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 419 cctcaccggcctactactac 438
           ||||||||||||||||||||
Sbjct: 9   cctcaccggcctactactac 28
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>gb|AC092531.16| Rattus norvegicus clone rp32-475b19, complete sequence
          Length = 160215

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 494   aaggaatggaagtgccccagagtg 517
             |||||||||||| |||||||||||
Sbjct: 99298 aaggaatggaagagccccagagtg 99275
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>gb|AC092530.35| Rattus norvegicus clone rp32-28p17, complete sequence
          Length = 221618

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 494    aaggaatggaagtgccccagagtg 517
              |||||||||||| |||||||||||
Sbjct: 173807 aaggaatggaagagccccagagtg 173830
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 1        gctaccctccccctcccctagggt 24
                ||||||| ||||||||||||||||
Sbjct: 20014393 gctacccaccccctcccctagggt 20014370
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 255      ggatgccgccggcgccgacg 274
                ||||||||||||||||||||
Sbjct: 27397004 ggatgccgccggcgccgacg 27397023



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 255      ggatgccgccggcgccgacg 274
                ||||||||||||||||||||
Sbjct: 27383910 ggatgccgccggcgccgacg 27383929
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>gb|AC154659.2| Mus musculus BAC clone RP24-269K6 from chromosome 17, complete sequence
          Length = 177071

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 376   gaggccatggaccccaactt 395
             ||||||||||||||||||||
Sbjct: 70583 gaggccatggaccccaactt 70564
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>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence
          Length = 3288558

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 387    ccccaactttttctaccagc 406
              ||||||||||||||||||||
Sbjct: 564431 ccccaactttttctaccagc 564412
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 261     cgccggcgccgacgcggccc 280
               ||||||||||||||||||||
Sbjct: 6316679 cgccggcgccgacgcggccc 6316698
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>gb|AE004876.1| Pseudomonas aeruginosa PAO1, section 437 of 529 of the complete
            genome
          Length = 16704

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 259  gccgccggcgccgacgcggc 278
            ||||||||||||||||||||
Sbjct: 2478 gccgccggcgccgacgcggc 2459
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 259    gccgccggcgccgacgcggc 278
              ||||||||||||||||||||
Sbjct: 516654 gccgccggcgccgacgcggc 516635
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 273     cgcggcccagcagccttccgggat 296
               |||||||||||| |||||||||||
Sbjct: 3012829 cgcggcccagcatccttccgggat 3012852
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>dbj|BS000227.1| Pan troglodytes chromosome 22 clone:PTB-059D22, map 22, complete
             sequences
          Length = 148847

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   ggcccagcagccttccggga 295
             ||||||||||||||||||||
Sbjct: 40307 ggcccagcagccttccggga 40326
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>dbj|AK068351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136K21, full
           insert sequence
          Length = 2075

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 255 ggatgccgccggcgccgacg 274
           ||||||||||||||||||||
Sbjct: 614 ggatgccgccggcgccgacg 595
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>dbj|AK068058.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132P13, full
           insert sequence
          Length = 1988

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 255 ggatgccgccggcgccgacg 274
           ||||||||||||||||||||
Sbjct: 589 ggatgccgccggcgccgacg 570
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>dbj|AP001745.1| Homo sapiens genomic DNA, chromosome 21q, section 89/105
          Length = 336578

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    ggcccagcagccttccggga 295
              ||||||||||||||||||||
Sbjct: 316580 ggcccagcagccttccggga 316599
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 259    gccgccggcgccgacgcggcccag 282
              |||||| |||||||||||||||||
Sbjct: 737151 gccgcccgcgccgacgcggcccag 737128
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 255      ggatgccgccggcgccgacg 274
                ||||||||||||||||||||
Sbjct: 27322604 ggatgccgccggcgccgacg 27322623



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 255      ggatgccgccggcgccgacg 274
                ||||||||||||||||||||
Sbjct: 27309510 ggatgccgccggcgccgacg 27309529
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>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 124605

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   ggatgccgccggcgccgacg 274
             ||||||||||||||||||||
Sbjct: 65324 ggatgccgccggcgccgacg 65343



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   ggatgccgccggcgccgacg 274
             ||||||||||||||||||||
Sbjct: 52230 ggatgccgccggcgccgacg 52249
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>dbj|AP001622.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1430A10, MX1-D21S171
            region, complete sequence
          Length = 149850

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 276  ggcccagcagccttccggga 295
            ||||||||||||||||||||
Sbjct: 6271 ggcccagcagccttccggga 6290
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>dbj|AP001621.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1342D7, MX1-D21S171
             region, complete sequence
          Length = 144087

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   ggcccagcagccttccggga 295
             ||||||||||||||||||||
Sbjct: 80834 ggcccagcagccttccggga 80853


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,358,574
Number of Sequences: 3902068
Number of extensions: 4358574
Number of successful extensions: 116712
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115175
Number of HSP's gapped (non-prelim): 1532
length of query: 640
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 617
effective length of database: 17,143,297,704
effective search space: 10577414683368
effective search space used: 10577414683368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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