ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd1g08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FUCO2_MOUSE (Q99KR8) Plasma alpha-L-fucosidase precursor (EC 3.2... 30 4.2
2CP17A_PAPHU (Q9GLD2) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVI... 28 9.4
3CP17A_PAPCY (Q8HYN0) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVI... 28 9.4
4CP17A_MACMU (Q8HYM9) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVI... 28 9.4
5CP17A_MACFA (Q2XVA1) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVI... 28 9.4

>FUCO2_MOUSE (Q99KR8) Plasma alpha-L-fucosidase precursor (EC 3.2.1.51)|
           (Alpha-L-fucosidase 2) (Alpha-L-fucoside fucohydrolase
           2)
          Length = 461

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
 Frame = -2

Query: 401 YNKIKATLHPCLXXXXXXXXXXXSFLMSGSNPEACLSTIFRY-PSASWSETLNSTMDPYW 225
           Y  +    HP              F +S + PE     + RY P   WS+      D YW
Sbjct: 174 YYSLFEWFHPLFLEDQSSSFQKQRFPVSKTLPEL-YELVNRYQPEVLWSDGDGGAPDHYW 232

Query: 224 KTTI*WQWLSSMTPVLK 174
            +T    WL + +PV K
Sbjct: 233 NSTGFLAWLYNESPVRK 249



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>CP17A_PAPHU (Q9GLD2) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)|
           (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase)
          Length = 508

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 190 IDESHCHYMVVFQYGSIVLFNVSDHEADGYLKIVERHASGLLPDMRKD 333
           ID S   ++ +    S++ FN+S    D  LKIV  +  G++  + K+
Sbjct: 165 IDISFPVFVAITNVISLICFNISYKNGDPELKIVHNYNEGIIDSLGKE 212



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>CP17A_PAPCY (Q8HYN0) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)|
           (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase)
          Length = 508

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 190 IDESHCHYMVVFQYGSIVLFNVSDHEADGYLKIVERHASGLLPDMRKD 333
           ID S   ++ +    S++ FN+S    D  LKIV  +  G++  + K+
Sbjct: 165 IDISFPVFVAITNVISLICFNISYKNGDPELKIVHNYNEGIIDSLGKE 212



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>CP17A_MACMU (Q8HYM9) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)|
           (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase)
          Length = 508

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 190 IDESHCHYMVVFQYGSIVLFNVSDHEADGYLKIVERHASGLLPDMRKD 333
           ID S   ++ +    S++ FN+S    D  LKIV  +  G++  + K+
Sbjct: 165 IDISFPVFVAITNVISLICFNISYKNGDPELKIVHNYNEGIIDSLGKE 212



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>CP17A_MACFA (Q2XVA1) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)|
           (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase)
          Length = 508

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 190 IDESHCHYMVVFQYGSIVLFNVSDHEADGYLKIVERHASGLLPDMRKD 333
           ID S   ++ +    S++ FN+S    D  LKIV  +  G++  + K+
Sbjct: 165 IDISFPVFVAITNVISLICFNISYKNGDPELKIVHNYNEGIIDSLGKE 212


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,742,491
Number of Sequences: 219361
Number of extensions: 1277036
Number of successful extensions: 3009
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3009
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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