>dbj|AK173590.1| Ciona intestinalis cDNA, clone:cicl008n01, full insert sequence
          Length = 1064

 Score =  283 bits (143), Expect = 7e-74
 Identities = 145/146 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgtcatcgatcacctccgaggtcaagttaccgcgacgacgacagatacaggaagaatgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cgtcatcgatcacctccgaggtcaagttaccgcgacgacgacagatacaggaagaatgaa 247

                                                                       
Query: 61  gggccgtggaagactcctttagacgcacaggttaatctaacactanggggcagtcttggg 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 248 gggccgtggaagactcctttagacgcacaggttaatctaacactagggggcagtcttggg 307

                                     
Query: 121 gttaaaggtccgaagaaaaagaagaa 146
           ||||||||||||||||||||||||||
Sbjct: 308 gttaaaggtccgaagaaaaagaagaa 333

>gb|AC154235.2| Mus musculus BAC clone RP24-347C11 from 17, complete sequence
          Length = 214934

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 39     cgacagatacaggaagaatgaa 60
              ||||||||||||||||||||||
Sbjct: 122157 cgacagatacaggaagaatgaa 122136

>emb|CT573084.4| Mouse DNA sequence from clone RP23-226G14 on chromosome 17, complete
             sequence
          Length = 221319

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 39    cgacagatacaggaagaatgaa 60
             ||||||||||||||||||||||
Sbjct: 15736 cgacagatacaggaagaatgaa 15757

>gb|AC117489.3| Homo sapiens 3 BAC CTD-2006M22 (CalTech BAC Library D) complete
             sequence
          Length = 145729

 Score = 42.1 bits (21), Expect = 0.45
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 120   ggttaaaggtccgaagaaaaa 140
             |||||||||||||||||||||
Sbjct: 26896 ggttaaaggtccgaagaaaaa 26916

>gb|AC153528.2| Mus musculus 10 BAC RP23-75N1 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 159605

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    acagatacaggaagaatgaa 60
             ||||||||||||||||||||
Sbjct: 27402 acagatacaggaagaatgaa 27421

>gb|AC116503.17| Mus musculus chromosome 9, clone RP24-302M3, complete sequence
          Length = 199065

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 111  cagtcttggggttaaaggt 129
            |||||||||||||||||||
Sbjct: 6318 cagtcttggggttaaaggt 6336

>gb|AY458641.2| Uncultured bacterium 463 clone EBAC080-L32B05 genomic sequence
          Length = 111495

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 57    tgaagggccgtggaagact 75
             |||||||||||||||||||
Sbjct: 93635 tgaagggccgtggaagact 93617

>gb|AC122273.4| Mus musculus BAC clone RP23-228B2 from 9, complete sequence
          Length = 196627

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 111   cagtcttggggttaaaggt 129
             |||||||||||||||||||
Sbjct: 18497 cagtcttggggttaaaggt 18479

>emb|AL645904.13| Mouse DNA sequence from clone RP23-121P11 on chromosome 11 Contains the
             gene for a novel protein (1700121K02Rik), the Hnrph1 gene
             for heterogeneous nuclear ribonucleoprotein H1, the Rufy1
             gene for RUN and FYVE domain containing 1, a novel
             pseudogene and three CpG islands, complete sequence
          Length = 193696

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 111   cagtcttggggttaaaggt 129
             |||||||||||||||||||
Sbjct: 59152 cagtcttggggttaaaggt 59134


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,414,438
Number of Sequences: 3902068
Number of extensions: 1414438
Number of successful extensions: 106025
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106008
Number of HSP's gapped (non-prelim): 17
length of query: 146
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 125
effective length of database: 17,151,101,840
effective search space: 2143887730000
effective search space used: 2143887730000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)