| Clone Name | basd1e22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_192800.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1860 Score = 398 bits (201), Expect = e-108 Identities = 342/389 (87%) Strand = Plus / Plus Query: 157 atgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggca 216 ||||||||||| |||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 1 atgaagtacgtgctggtgaccggcggggtggtgagcgggctcgggaagggcgtcacggcg 60 Query: 217 agcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagatcgat 276 ||||||||||||||||| |||||| | ||||| ||||||||||||||||||||||||||| Sbjct: 61 agcagcatcggcgtcgtcctcaagtcgtgcgggctccgcattacctccatcaagatcgat 120 Query: 277 ccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgtt 336 |||||||||||||| |||||||| |||||||| || || |||||||| || || ||||| Sbjct: 121 ccttaccttaacacagatgctgggaccatgtccccgttcgaacatggtgaggtttttgtg 180 Query: 337 ctagatgatggtggcgaggtggacttggatctcggaaactatgagaggtttctagaaatt 396 || ||||||||||||||||||||||||||||| || || || ||||||||||| || ||| Sbjct: 181 cttgatgatggtggcgaggtggacttggatcttgggaattacgagaggtttcttgacatt 240 Query: 397 aagctgacacgcgacaataacataactactggaaagatctaccagtctgttattaataaa 456 || || || | |||||||| ||||| || ||||||||||||||||| ||| || | || Sbjct: 241 aaactaaccagggacaataatataaccacaggaaagatctaccagtccgttcttgaaaag 300 Query: 457 gaaagagagggagaatacctgggaaagactgtgcaggttgtcccgcacatcacaaatgcc 516 ||||| |||| |||||| ||||||||||||| |||||||||||||| |||||||||||| Sbjct: 301 gaaaggaagggggaatacttgggaaagactgttcaggttgtcccgcatatcacaaatgcc 360 Query: 517 atacaagattggatcgagcgtgttgcaat 545 |||||||| ||||| |||||||| ||||| Sbjct: 361 atacaagagtggattgagcgtgtcgcaat 389
>dbj|AK070411.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023053C07, full insert sequence Length = 2466 Score = 315 bits (159), Expect = 8e-83 Identities = 303/351 (86%) Strand = Plus / Plus Query: 156 gatgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggc 215 |||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||| Sbjct: 191 gatgaagtacgtgctggtgacgggcggggtggtgagcggcctcgggaagggggtgacggc 250 Query: 216 aagcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagatcga 275 ||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||| Sbjct: 251 gagcagcatcggcgtcgtgctcaaggactgcggcctccgcgtcacctccatcaagatcga 310 Query: 276 tccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgt 335 ||||||||| |||||||||||||||||||||||||| || || || || ||||||||||| Sbjct: 311 tccttacctcaacaccgatgctggaaccatgtctccattcgagcacggtgaagtgtttgt 370 Query: 336 tctagatgatggtggcgaggtggacttggatctcggaaactatgagaggtttctagaaat 395 | | || |||||||| |||||||||||||| || ||||| |||||| | ||||| || || Sbjct: 371 tttggacgatggtggtgaggtggacttggaccttggaaattatgagcgatttctggacat 430 Query: 396 taagctgacacgcgacaataacataactactggaaagatctaccagtctgttattaataa 455 ||| |||| || ||||| || ||||| || ||||||||||| ||| |||||||| | || Sbjct: 431 caagttgactcgtgacaacaatataaccacgggaaagatctatcaggctgttattgacaa 490 Query: 456 agaaagagagggagaatacctgggaaagactgtgcaggttgtcccgcacat 506 ||| || ||||| ||| ||||||| ||||| |||||||| || ||||| Sbjct: 491 ggaacgaagaggagactacttgggaaaaactgttcaggttgtaccacacat 541
>gb|AY107651.1| Zea mays PCO080366 mRNA sequence Length = 642 Score = 305 bits (154), Expect = 8e-80 Identities = 328/386 (84%) Strand = Plus / Plus Query: 157 atgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggca 216 |||||||||||||| || |||||||| || |||||||| || || ||||| || || || Sbjct: 208 atgaagtacgtccttgtcaccggcggggtagtgagcggcctgggcaagggcgttacagcc 267 Query: 217 agcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagatcgat 276 ||||||||||||||||| || ||||| ||||||||||||||||| ||||| ||||| ||| Sbjct: 268 agcagcatcggcgtcgtcctgaaggcgtgcggcctccgcattacgtccattaagattgat 327 Query: 277 ccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgtt 336 ||||| |||||||| |||||||| || |||||||| || |||||||| |||||||| || Sbjct: 328 ccttatcttaacactgatgctgggactatgtctccattcgaacatggtgaagtgttcgta 387 Query: 337 ctagatgatggtggcgaggtggacttggatctcggaaactatgagaggtttctagaaatt 396 || ||||||||||||||||||||||||||||| || || || ||||| ||| | || ||| Sbjct: 388 ctggatgatggtggcgaggtggacttggatcttggtaattacgagagatttttggacatt 447 Query: 397 aagctgacacgcgacaataacataactactggaaagatctaccagtctgttattaataaa 456 || || || || |||||||| ||||| |||||||||||||| |||||||| ||| | || Sbjct: 448 aaacttactcgggacaataatataaccactggaaagatctatcagtctgtaattgacaag 507 Query: 457 gaaagagagggagaatacctgggaaagactgtgcaggttgtcccgcacatcacaaatgcc 516 || || | || ||||| ||||||||||||| |||||||| || ||||||||||||||| Sbjct: 508 gagaggaaaggggaatatttgggaaagactgtccaggttgtgccacacatcacaaatgcc 567 Query: 517 atacaagattggatcgagcgtgttgc 542 ||||| || ||||||||||||||||| Sbjct: 568 atacaggagtggatcgagcgtgttgc 593
>ref|NM_192420.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1770 Score = 186 bits (94), Expect = 5e-44 Identities = 187/218 (85%) Strand = Plus / Plus Query: 157 atgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggca 216 ||||||||||| |||||||| || || ||||||||||| ||||| ||||| ||||| || Sbjct: 1 atgaagtacgtgctggtgacaggaggggtggtgagcggcctcggcaagggcgtgaccgcg 60 Query: 217 agcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagatcgat 276 |||||||||||||||||||||||||||||||| |||||| | ||| |||||||||| || Sbjct: 61 agcagcatcggcgtcgtgctcaaggcctgcgggctccgcgtcaccaccatcaagattgac 120 Query: 277 ccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgtt 336 || ||||| ||||| |||||||||||||||||||| || || ||||| || || || ||| Sbjct: 121 ccatacctcaacactgatgctggaaccatgtctccgttcgagcatggtgaggtcttcgtt 180 Query: 337 ctagatgatggtggcgaggtggacttggatctcggaaa 374 | || |||||||| |||||||||||||| || ||||| Sbjct: 181 ttggacgatggtggagaggtggacttggaccttggaaa 218
>dbj|AK069482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020O19, full insert sequence Length = 2451 Score = 186 bits (94), Expect = 5e-44 Identities = 187/218 (85%) Strand = Plus / Plus Query: 157 atgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggca 216 ||||||||||| |||||||| || || ||||||||||| ||||| ||||| ||||| || Sbjct: 189 atgaagtacgtgctggtgacaggaggggtggtgagcggcctcggcaagggcgtgaccgcg 248 Query: 217 agcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagatcgat 276 |||||||||||||||||||||||||||||||| |||||| | ||| |||||||||| || Sbjct: 249 agcagcatcggcgtcgtgctcaaggcctgcgggctccgcgtcaccaccatcaagattgac 308 Query: 277 ccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgtt 336 || ||||| ||||| |||||||||||||||||||| || || ||||| || || || ||| Sbjct: 309 ccatacctcaacactgatgctggaaccatgtctccgttcgagcatggtgaggtcttcgtt 368 Query: 337 ctagatgatggtggcgaggtggacttggatctcggaaa 374 | || |||||||| |||||||||||||| || ||||| Sbjct: 369 ttggacgatggtggagaggtggacttggaccttggaaa 406
>dbj|AK102275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089D14, full insert sequence Length = 2086 Score = 182 bits (92), Expect = 8e-43 Identities = 167/192 (86%) Strand = Plus / Plus Query: 175 accggcggcgtggtgagcgggctcgggaagggggtgacggcaagcagcatcggcgtcgtg 234 ||||||||||| || |||||||||||||||||||| ||||| |||||| |||||||||| Sbjct: 81 accggcggcgtcgtcagcgggctcgggaagggggtcacggccagcagcgtcggcgtcgtc 140 Query: 235 ctcaaggcctgcggcctccgcattacctccatcaagatcgatccttaccttaacaccgat 294 ||||||||||||||||||||| | |||| ||||||||||||||| || | ||||| ||| Sbjct: 141 ctcaaggcctgcggcctccgcgtcacctgcatcaagatcgatccatatttaaacacagat 200 Query: 295 gctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatgatggtggcgag 354 ||||| || |||||||||||||| ||||| || || ||||| || || |||||||| ||| Sbjct: 201 gctggtacaatgtctccttttgagcatggtgaggtctttgtgcttgacgatggtggagag 260 Query: 355 gtggacttggat 366 || ||||||||| Sbjct: 261 gttgacttggat 272
>gb|AY104075.1| Zea mays PCO065842 mRNA sequence Length = 1234 Score = 182 bits (92), Expect = 8e-43 Identities = 275/336 (81%) Strand = Plus / Plus Query: 160 aagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggcaagc 219 |||||||| ||| | ||||||||||| || ||||| ||||| ||||| || || || ||| Sbjct: 172 aagtacgtgctgatcaccggcggcgtcgtcagcggcctcggcaagggcgtcaccgccagc 231 Query: 220 agcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagatcgatcct 279 |||||||||||||| |||||||||||||| |||||| | || | ||||||||||||||| Sbjct: 232 agcatcggcgtcgtcctcaaggcctgcgggctccgcgtcacttgcatcaagatcgatcca 291 Query: 280 taccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttcta 339 ||| | ||||| |||||||| || ||||| || ||||| |||||||| ||||||||||| Sbjct: 292 tacttgaacacagatgctggtacaatgtccccctttgagcatggcgaggtgtttgttctt 351 Query: 340 gatgatggtggcgaggtggacttggatctcggaaactatgagaggtttctagaaattaag 399 ||||||||||| ||||| ||||||||| | || || |||||| | || |||| ||| Sbjct: 352 gatgatggtggagaggttgacttggatttggggaattatgagcgtttcatagatgttact 411 Query: 400 ctgacacgcgacaataacataactactggaaagatctaccagtctgttattaataaagaa 459 |||||| | || || ||||| || ||||||||||| ||||||||||| ||| | || || Sbjct: 412 ctgacaagggataacaacattaccactggaaagatataccagtctgtcattgagaaggag 471 Query: 460 agagagggagaatacctgggaaagactgtgcaggtt 495 ||| ||| || || || ||||||||||| |||||| Sbjct: 472 agaaggggtgattatcttggaaagactgtacaggtt 507
>gb|BT013487.1| Lycopersicon esculentum clone 132171F, mRNA sequence Length = 2418 Score = 178 bits (90), Expect = 1e-41 Identities = 249/302 (82%) Strand = Plus / Plus Query: 238 aaggcctgcggcctccgcattacctccatcaagatcgatccttaccttaacaccgatgct 297 ||||||||||| || || |||||||||| ||||| |||||||| | ||||| |||||| Sbjct: 216 aaggcctgcggtcttcgtgttacctccattaagattgatccttatttgaacactgatgct 275 Query: 298 ggaaccatgtctccttttgaacatggcgaagtgtttgttctagatgatggtggcgaggtg 357 || || ||||||||||| || ||||| ||||||| ||| | ||||||||||| |||||| Sbjct: 276 ggcacaatgtctcctttcgagcatggagaagtgtatgtcttggatgatggtggagaggtg 335 Query: 358 gacttggatctcggaaactatgagaggtttctagaaattaagctgacacgcgacaataac 417 ||| |||| || |||||||| ||| | |||||||| |||||| |||| ||||||| || Sbjct: 336 gacctggaccttggaaactacgagcgttttctagatattaagttgaccggcgacaacaat 395 Query: 418 ataactactggaaagatctaccagtctgttattaataaagaaagagagggagaatacctg 477 ||||||||||| || || || |||||||||||| |||| || ||| | || || || || Sbjct: 396 ataactactgggaaaatttatcagtctgttattgataaggagagaaaaggggattatttg 455 Query: 478 ggaaagactgtgcaggttgtcccgcacatcacaaatgccatacaagattggatcgagcgt 537 ||||||||||| ||||||||||| ||||| ||| ||||||| ||||| ||||| || ||| Sbjct: 456 ggaaagactgttcaggttgtccctcacattacagatgccattcaagagtggatagaacgt 515 Query: 538 gt 539 || Sbjct: 516 gt 517
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 172 bits (87), Expect = 8e-40 Identities = 111/119 (93%) Strand = Plus / Minus Query: 156 gatgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggc 215 |||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||| Sbjct: 121036 gatgaagtacgtgctggtgacgggcggggtggtgagcggcctcgggaagggggtgacggc 120977 Query: 216 aagcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagatcg 274 ||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||| Sbjct: 120976 gagcagcatcggcgtcgtgctcaaggactgcggcctccgcgtcacctccatcaagatcg 120918 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 ||||||||||| |||||||||||||||||||||||||| || || || || ||||||||| Sbjct: 119955 gatccttacctcaacaccgatgctggaaccatgtctccattcgagcacggtgaagtgttt 119896 Query: 334 gttctagatgatggtggcgaggt 356 ||| | || |||||||| ||||| Sbjct: 119895 gttttggacgatggtggtgaggt 119873 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 353 aggtggacttggatctcggaaactatgagaggtttctagaaattaagctgacacgcgaca 412 ||||||||||||| || ||||| |||||| | ||||| || || ||| |||| || |||| Sbjct: 119558 aggtggacttggaccttggaaattatgagcgatttctggacatcaagttgactcgtgaca 119499 Query: 413 ataacataactactggaaagatcta 437 | || ||||| || ||||||||||| Sbjct: 119498 acaatataaccacgggaaagatcta 119474
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 172 bits (87), Expect = 8e-40 Identities = 111/119 (93%) Strand = Plus / Minus Query: 156 gatgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggc 215 |||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||| Sbjct: 28336794 gatgaagtacgtgctggtgacgggcggggtggtgagcggcctcgggaagggggtgacggc 28336735 Query: 216 aagcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagatcg 274 ||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||| Sbjct: 28336734 gagcagcatcggcgtcgtgctcaaggactgcggcctccgcgtcacctccatcaagatcg 28336676 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 156 gatgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggc 215 |||||||||||| |||||| || |||||| | ||||| ||||| |||||||||||||| Sbjct: 28171862 gatgaagtacgtggtggtgatgggaggcgtgatcagcggcctcggcaagggggtgacggc 28171921 Query: 216 aagcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagatcg 274 |||||||| |||||||| |||||||| |||||||||||| |||| ||||| ||||||| Sbjct: 28171922 gagcagcattggcgtcgtcctcaaggcgtgcggcctccgcgttacgtccattaagatcg 28171980 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Minus Query: 156 gatgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggc 215 |||||||||||| |||||| || |||||| | ||||| ||||| |||||||||||||| Sbjct: 28136482 gatgaagtacgtggtggtgatgggaggcgtgatcagcggcctcggcaagggggtgacggc 28136423 Query: 216 aagcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagatcg 274 |||||||| |||||||| |||||||| |||||||||||| |||| ||||| ||||||| Sbjct: 28136422 gagcagcattggcgtcgtcctcaaggcgtgcggcctccgcgttacgtccattaagatcg 28136364 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 ||||||||||| |||||||||||||||||||||||||| || || || || ||||||||| Sbjct: 28335713 gatccttacctcaacaccgatgctggaaccatgtctccattcgagcacggtgaagtgttt 28335654 Query: 334 gttctagatgatggtggcgaggt 356 ||| | || |||||||| ||||| Sbjct: 28335653 gttttggacgatggtggtgaggt 28335631 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 ||||||||| ||||| | ||||||||||| || |||||| |||||| |||||||||||| Sbjct: 28135752 gatccttactttaacgctgatgctggaactatatctcctcatgaacacggcgaagtgttt 28135693 Query: 334 gttctagatgatggtggcgaggt 356 || ||||||||||||| ||||| Sbjct: 28135692 gtattagatgatggtggtgaggt 28135670 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 ||||||||| ||||| | ||||| ||||| || |||||| |||||| |||||||||||| Sbjct: 28173002 gatccttactttaacgctgatgccggaactatatctcctcatgaacacggcgaagtgttt 28173061 Query: 334 gttctagatgatggtggcgaggt 356 || ||||||||||||| ||||| Sbjct: 28173062 gtgttagatgatggtggtgaggt 28173084 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 353 aggtggacttggatctcggaaactatgagaggtttctagaaattaagctgacacgcgaca 412 |||||||||||||||| |||||||||||||||||||| || ||||| || || || ||| Sbjct: 28135582 aggtggacttggatcttggaaactatgagaggtttctcgacattaaactaactcgagacc 28135523 Query: 413 ataacataactactggaaagatc 435 ||| |||||| | ||||||||| Sbjct: 28135522 atagcataaccgccggaaagatc 28135500 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 357 ggacttggatctcggaaactatgagaggtttctagaaattaa 398 |||||||||||| || ||||||||||||||||| || ||||| Sbjct: 28173175 ggacttggatcttgggaactatgagaggtttctcgacattaa 28173216 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 353 aggtggacttggatctcggaaactatgagaggtttctagaaattaagctgacacgcgaca 412 ||||||||||||| || ||||| |||||| | ||||| || || ||| |||| || |||| Sbjct: 28335316 aggtggacttggaccttggaaattatgagcgatttctggacatcaagttgactcgtgaca 28335257 Query: 413 ataacataactactggaaagatcta 437 | || ||||| || ||||||||||| Sbjct: 28335256 acaatataaccacgggaaagatcta 28335232 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 491 aggttgtcccgcacatcacaaatgccatacaagattggatcgagcgtgt 539 ||||| |||| || || ||||||| |||||||||||||| |||||||| Sbjct: 28173794 aggttatcccacatattacaaatgagatacaagattggattgagcgtgt 28173842
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 156 gatgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggc 215 |||||||||||| |||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 24500781 gatgaagtacgtgctggtgaccggcggggtggtgagcgggctcgggaagggcgtcacggc 24500722 Query: 216 aagcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagatcg 274 ||||||||||||||||| |||||| | ||||| ||||||||||||||||||||||||| Sbjct: 24500721 gagcagcatcggcgtcgtcctcaagtcgtgcgggctccgcattacctccatcaagatcg 24500663 Score = 127 bits (64), Expect = 4e-26 Identities = 103/116 (88%) Strand = Plus / Plus Query: 157 atgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggca 216 ||||||||||| |||||||| || || ||||||||||| ||||| ||||| ||||| || Sbjct: 26507988 atgaagtacgtgctggtgacaggaggggtggtgagcggcctcggcaagggcgtgaccgcg 26508047 Query: 217 agcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagat 272 |||||||||||||||||||||||||||||||| |||||| | ||| |||||||||| Sbjct: 26508048 agcagcatcggcgtcgtgctcaaggcctgcgggctccgcgtcaccaccatcaagat 26508103 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 ||||||||||||||||| |||||||| |||||||| || || |||||||| || || ||| Sbjct: 24499352 gatccttaccttaacacagatgctgggaccatgtccccgttcgaacatggtgaggttttt 24499293 Query: 334 gttctagatgatggtggcgaggt 356 || || ||||||||||||||||| Sbjct: 24499292 gtgcttgatgatggtggcgaggt 24499270 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 491 aggttgtcccgcacatcacaaatgccatacaagattggatcgagcgtgttgcaat 545 ||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 24498528 aggttgtcccgcatatcacaaatgccatacaagagtggattgagcgtgtcgcaat 24498474 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 353 aggtggacttggatctcggaaactatgagaggtttctagaaattaagctgacacgcgaca 412 |||||||||||||||| || || || ||||||||||| || ||||| || || | |||| Sbjct: 24499188 aggtggacttggatcttgggaattacgagaggtttcttgacattaaactaaccagggaca 24499129 Query: 413 ataacataactactggaaagatctaccag 441 |||| ||||| || ||||||||||||||| Sbjct: 24499128 ataatataaccacaggaaagatctaccag 24499100 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 280 taccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttcta 339 ||||| ||||| |||||||||||||||||||| || || ||||| || || || ||| | Sbjct: 26509403 tacctcaacactgatgctggaaccatgtctccgttcgagcatggtgaggtcttcgttttg 26509462 Query: 340 gatgatggtggcgaggt 356 || |||||||| ||||| Sbjct: 26509463 gacgatggtggagaggt 26509479 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 cctgggaaagactgtgcaggt 494 ||||||||||||||||||||| Sbjct: 152395 cctgggaaagactgtgcaggt 152415 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ggcggaggtcggaggcggcgtgcg 121 |||||||| ||||||||||||||| Sbjct: 42705383 ggcggagggcggaggcggcgtgcg 42705360 Score = 40.1 bits (20), Expect = 7.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 91 tcgcggcggcggaggtcggaggcggcgtgcgg 122 ||||||||||||||| ||||||||||| |||| Sbjct: 33477452 tcgcggcggcggagg-cggaggcggcgagcgg 33477482
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 156 gatgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggc 215 |||||||||||| |||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 81165 gatgaagtacgtgctggtgaccggcggggtggtgagcgggctcgggaagggcgtcacggc 81106 Query: 216 aagcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagatcg 274 ||||||||||||||||| |||||| | ||||| ||||||||||||||||||||||||| Sbjct: 81105 gagcagcatcggcgtcgtcctcaagtcgtgcgggctccgcattacctccatcaagatcg 81047 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 ||||||||||||||||| |||||||| |||||||| || || |||||||| || || ||| Sbjct: 79736 gatccttaccttaacacagatgctgggaccatgtccccgttcgaacatggtgaggttttt 79677 Query: 334 gttctagatgatggtggcgaggt 356 || || ||||||||||||||||| Sbjct: 79676 gtgcttgatgatggtggcgaggt 79654 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 491 aggttgtcccgcacatcacaaatgccatacaagattggatcgagcgtgttgcaat 545 ||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 78912 aggttgtcccgcatatcacaaatgccatacaagagtggattgagcgtgtcgcaat 78858 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 353 aggtggacttggatctcggaaactatgagaggtttctagaaattaagctgacacgcgaca 412 |||||||||||||||| || || || ||||||||||| || ||||| || || | |||| Sbjct: 79572 aggtggacttggatcttgggaattacgagaggtttcttgacattaaactaaccagggaca 79513 Query: 413 ataacataactactggaaagatctaccag 441 |||| ||||| || ||||||||||||||| Sbjct: 79512 ataatataaccacaggaaagatctaccag 79484
>gb|BT014620.1| Lycopersicon esculentum clone 134123F, mRNA sequence Length = 1912 Score = 157 bits (79), Expect = 5e-35 Identities = 232/283 (81%) Strand = Plus / Plus Query: 257 ttacctccatcaagatcgatccttaccttaacaccgatgctggaaccatgtctccttttg 316 |||| ||||| ||||| ||||||||| | ||||| ||||||||||| |||||||| |||| Sbjct: 271 ttacttccattaagatagatccttacttgaacactgatgctggaacaatgtctccatttg 330 Query: 317 aacatggcgaagtgtttgttctagatgatggtggcgaggtggacttggatctcggaaact 376 | ||||| ||||| ||||| | || |||||||| ||||||||| | || || || |||| Sbjct: 331 agcatggagaagtatttgtcttggacgatggtggagaggtggacctagaccttggtaact 390 Query: 377 atgagaggtttctagaaattaagctgacacgcgacaataacataactactggaaagatct 436 |||| | ||||| || |||||| ||||||| ||||| || |||||||||||||| || | Sbjct: 391 atgaacgctttctggatattaagttgacacgtgacaacaatataactactggaaaaattt 450 Query: 437 accagtctgttattaataaagaaagagagggagaatacctgggaaagactgtgcaggttg 496 ||||||||||| || |||| || ||| | ||||| || |||| |||||||| ||||| | Sbjct: 451 accagtctgttcttgataaggagagaaaaggagattatttggggaagactgttcaggtcg 510 Query: 497 tcccgcacatcacaaatgccatacaagattggatcgagcgtgt 539 |||| ||||| ||| ||||||| ||||| ||||| || ||||| Sbjct: 511 tccctcacattacagatgccattcaagagtggattgaacgtgt 553
>dbj|AK063965.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A03, full insert sequence Length = 2119 Score = 131 bits (66), Expect = 3e-27 Identities = 129/150 (86%) Strand = Plus / Plus Query: 217 agcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagatcgat 276 |||||| |||||||||| ||||||||||||||||||||| | |||| ||||||||||||| Sbjct: 137 agcagcgtcggcgtcgtcctcaaggcctgcggcctccgcgtcacctgcatcaagatcgat 196 Query: 277 ccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgtt 336 || || | ||||| |||||||| || |||||||||||||| ||||| || || ||||| Sbjct: 197 ccatatttaaacacagatgctggtacaatgtctccttttgagcatggtgaggtctttgtg 256 Query: 337 ctagatgatggtggcgaggtggacttggat 366 || || |||||||| ||||| ||||||||| Sbjct: 257 cttgacgatggtggagaggttgacttggat 286
>ref|NM_112102.2| Arabidopsis thaliana EMB2742; CTP synthase/ catalytic AT3G12670 (EMB2742) mRNA, complete cds Length = 2056 Score = 127 bits (64), Expect = 4e-26 Identities = 184/224 (82%) Strand = Plus / Plus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 |||||||| |||||||| ||||||||||| |||||||| ||||| ||||| ||||| ||| Sbjct: 167 gatccttatcttaacactgatgctggaacaatgtctccgtttgagcatggagaagtattt 226 Query: 334 gttctagatgatggtggcgaggtggacttggatctcggaaactatgagaggtttctagaa 393 || | ||||||||||| |||||||| ||||| || ||||||||||| | ||| |||| Sbjct: 227 gtattggatgatggtggagaggtggatttggaccttggaaactatgaacgatttttagac 286 Query: 394 attaagctgacacgcgacaataacataactactggaaagatctaccagtctgttattaat 453 | || |||| || ||||| || ||||||||||||||||| |||||||| |||||| | Sbjct: 287 agtacattgacccgtgacaacaatataactactggaaagatataccagtcagttattgac 346 Query: 454 aaagaaagagagggagaatacctgggaaagactgtgcaggttgt 497 || ||||| |||| || ||||| |||| ||||| |||||||| Sbjct: 347 aaggaaaggaagggggactacctcggaagaactgtacaggttgt 390
>gb|BT008360.1| Arabidopsis thaliana At3g12670 gene, complete cds Length = 1776 Score = 127 bits (64), Expect = 4e-26 Identities = 184/224 (82%) Strand = Plus / Plus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 |||||||| |||||||| ||||||||||| |||||||| ||||| ||||| ||||| ||| Sbjct: 118 gatccttatcttaacactgatgctggaacaatgtctccgtttgagcatggagaagtattt 177 Query: 334 gttctagatgatggtggcgaggtggacttggatctcggaaactatgagaggtttctagaa 393 || | ||||||||||| |||||||| ||||| || ||||||||||| | ||| |||| Sbjct: 178 gtattggatgatggtggagaggtggatttggaccttggaaactatgaacgatttttagac 237 Query: 394 attaagctgacacgcgacaataacataactactggaaagatctaccagtctgttattaat 453 | || |||| || ||||| || ||||||||||||||||| |||||||| |||||| | Sbjct: 238 agtacattgacccgtgacaacaatataactactggaaagatataccagtcagttattgac 297 Query: 454 aaagaaagagagggagaatacctgggaaagactgtgcaggttgt 497 || ||||| |||| || ||||| |||| ||||| |||||||| Sbjct: 298 aaggaaaggaagggggactacctcggaagaactgtacaggttgt 341
>gb|AY093110.1| Arabidopsis thaliana CTP-synthetase, putative (At3g12670) mRNA, complete cds Length = 2056 Score = 127 bits (64), Expect = 4e-26 Identities = 184/224 (82%) Strand = Plus / Plus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 |||||||| |||||||| ||||||||||| |||||||| ||||| ||||| ||||| ||| Sbjct: 167 gatccttatcttaacactgatgctggaacaatgtctccgtttgagcatggagaagtattt 226 Query: 334 gttctagatgatggtggcgaggtggacttggatctcggaaactatgagaggtttctagaa 393 || | ||||||||||| |||||||| ||||| || ||||||||||| | ||| |||| Sbjct: 227 gtattggatgatggtggagaggtggatttggaccttggaaactatgaacgatttttagac 286 Query: 394 attaagctgacacgcgacaataacataactactggaaagatctaccagtctgttattaat 453 | || |||| || ||||| || ||||||||||||||||| |||||||| |||||| | Sbjct: 287 agtacattgacccgtgacaacaatataactactggaaagatataccagtcagttattgac 346 Query: 454 aaagaaagagagggagaatacctgggaaagactgtgcaggttgt 497 || ||||| |||| || ||||| |||| ||||| |||||||| Sbjct: 347 aaggaaaggaagggggactacctcggaagaactgtacaggttgt 390
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 127 bits (64), Expect = 4e-26 Identities = 91/100 (91%) Strand = Plus / Minus Query: 175 accggcggcgtggtgagcgggctcgggaagggggtgacggcaagcagcatcggcgtcgtg 234 ||||||||||| || |||||||||||||||||||| ||||| |||||| |||||||||| Sbjct: 22696061 accggcggcgtcgtcagcgggctcgggaagggggtcacggccagcagcgtcggcgtcgtc 22696002 Query: 235 ctcaaggcctgcggcctccgcattacctccatcaagatcg 274 ||||||||||||||||||||| | |||| ||||||||||| Sbjct: 22696001 ctcaaggcctgcggcctccgcgtcacctgcatcaagatcg 22695962 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 286 aacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatgat 345 ||||| |||||||| || |||||||||||||| ||||| || || ||||| || || ||| Sbjct: 22695024 aacacagatgctggtacaatgtctccttttgagcatggtgaggtctttgtgcttgacgat 22694965 Query: 346 ggtggcgaggt 356 ||||| ||||| Sbjct: 22694964 ggtggagaggt 22694954
>dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0006H05 Length = 154821 Score = 127 bits (64), Expect = 4e-26 Identities = 103/116 (88%) Strand = Plus / Plus Query: 157 atgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggca 216 ||||||||||| |||||||| || || ||||||||||| ||||| ||||| ||||| || Sbjct: 116607 atgaagtacgtgctggtgacaggaggggtggtgagcggcctcggcaagggcgtgaccgcg 116666 Query: 217 agcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagat 272 |||||||||||||||||||||||||||||||| |||||| | ||| |||||||||| Sbjct: 116667 agcagcatcggcgtcgtgctcaaggcctgcgggctccgcgtcaccaccatcaagat 116722 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 280 taccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttcta 339 ||||| ||||| |||||||||||||||||||| || || ||||| || || || ||| | Sbjct: 118022 tacctcaacactgatgctggaaccatgtctccgttcgagcatggtgaggtcttcgttttg 118081 Query: 340 gatgatggtggcgaggt 356 || |||||||| ||||| Sbjct: 118082 gacgatggtggagaggt 118098
>dbj|AK111300.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-B02, full insert sequence Length = 768 Score = 127 bits (64), Expect = 4e-26 Identities = 103/116 (88%) Strand = Plus / Plus Query: 157 atgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggca 216 ||||||||||| |||||||| || || ||||||||||| ||||| ||||| ||||| || Sbjct: 186 atgaagtacgtgctggtgacaggaggggtggtgagcggcctcggcaagggcgtgaccgcg 245 Query: 217 agcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagat 272 |||||||||||||||||||||||||||||||| |||||| | ||| |||||||||| Sbjct: 246 agcagcatcggcgtcgtgctcaaggcctgcgggctccgcgtcaccaccatcaagat 301
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 127 bits (64), Expect = 4e-26 Identities = 91/100 (91%) Strand = Plus / Minus Query: 175 accggcggcgtggtgagcgggctcgggaagggggtgacggcaagcagcatcggcgtcgtg 234 ||||||||||| || |||||||||||||||||||| ||||| |||||| |||||||||| Sbjct: 22624252 accggcggcgtcgtcagcgggctcgggaagggggtcacggccagcagcgtcggcgtcgtc 22624193 Query: 235 ctcaaggcctgcggcctccgcattacctccatcaagatcg 274 ||||||||||||||||||||| | |||| ||||||||||| Sbjct: 22624192 ctcaaggcctgcggcctccgcgtcacctgcatcaagatcg 22624153 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 286 aacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatgat 345 ||||| |||||||| || |||||||||||||| ||||| || || ||||| || || ||| Sbjct: 22623215 aacacagatgctggtacaatgtctccttttgagcatggtgaggtctttgtgcttgacgat 22623156 Query: 346 ggtggcgaggt 356 ||||| ||||| Sbjct: 22623155 ggtggagaggt 22623145
>emb|AL928745.3|CNS08CBI Oryza sativa chromosome 12, . BAC OSJNBb0092G12 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131603 Score = 127 bits (64), Expect = 4e-26 Identities = 91/100 (91%) Strand = Plus / Minus Query: 175 accggcggcgtggtgagcgggctcgggaagggggtgacggcaagcagcatcggcgtcgtg 234 ||||||||||| || |||||||||||||||||||| ||||| |||||| |||||||||| Sbjct: 7911 accggcggcgtcgtcagcgggctcgggaagggggtcacggccagcagcgtcggcgtcgtc 7852 Query: 235 ctcaaggcctgcggcctccgcattacctccatcaagatcg 274 ||||||||||||||||||||| | |||| ||||||||||| Sbjct: 7851 ctcaaggcctgcggcctccgcgtcacctgcatcaagatcg 7812 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 286 aacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatgat 345 ||||| |||||||| || |||||||||||||| ||||| || || ||||| || || ||| Sbjct: 6874 aacacagatgctggtacaatgtctccttttgagcatggtgaggtctttgtgcttgacgat 6815 Query: 346 ggtggcgaggt 356 ||||| ||||| Sbjct: 6814 ggtggagaggt 6804
>ref|NM_102819.2| Arabidopsis thaliana CTP synthase/ catalytic AT1G30820 mRNA, complete cds Length = 2472 Score = 123 bits (62), Expect = 6e-25 Identities = 218/270 (80%) Strand = Plus / Plus Query: 265 atcaagatcgatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggc 324 ||||| ||||||||||| || ||||| ||||||||||| |||||||| |||||||| || Sbjct: 440 atcaaaatcgatccttatctgaacactgatgctggaactatgtctccatttgaacacggt 499 Query: 325 gaagtgtttgttctagatgatggtggcgaggtggacttggatctcggaaactatgagagg 384 ||||| ||||| | || |||||||| |||||||| | ||||| |||||||| || ||| Sbjct: 500 gaagtttttgtcttggacgatggtggtgaggtggatcttgatcttggaaactacgaaagg 559 Query: 385 tttctagaaattaagctgacacgcgacaataacataactactggaaagatctaccagtct 444 |||||||| || || | ||| | ||||||||||| |||||||| || || || ||| | Sbjct: 560 tttctagatatcaaattaacaagagacaataacatcactactgggaaaatttatcagcat 619 Query: 445 gttattaataaagaaagagagggagaatacctgggaaagactgtgcaggttgtcccgcac 504 |||||| |||||| || | ||||| || ||||||||||||| |||||||| || || Sbjct: 620 gttattgctaaagagaggaaaggagattatttgggaaagactgttcaggttgttcctcat 679 Query: 505 atcacaaatgccatacaagattggatcgag 534 |||| |||| || ||||||||||||||| Sbjct: 680 gtcactgatgcaattcaagattggatcgag 709
>emb|BX813942.1|CNS0AASW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB49ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2201 Score = 123 bits (62), Expect = 6e-25 Identities = 218/270 (80%) Strand = Plus / Plus Query: 265 atcaagatcgatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggc 324 ||||| ||||||||||| || ||||| ||||||||||| |||||||| |||||||| || Sbjct: 344 atcaaaatcgatccttatctgaacactgatgctggaactatgtctccatttgaacacggt 403 Query: 325 gaagtgtttgttctagatgatggtggcgaggtggacttggatctcggaaactatgagagg 384 ||||| ||||| | || |||||||| |||||||| | ||||| |||||||| || ||| Sbjct: 404 gaagtttttgtcttggacgatggtggtgaggtggatcttgatcttggaaactacgaaagg 463 Query: 385 tttctagaaattaagctgacacgcgacaataacataactactggaaagatctaccagtct 444 |||||||| || || | ||| | ||||||||||| |||||||| || || || ||| | Sbjct: 464 tttctagatatcaaattaacaagagacaataacatcactactgggaaaatttatcagcat 523 Query: 445 gttattaataaagaaagagagggagaatacctgggaaagactgtgcaggttgtcccgcac 504 |||||| |||||| || | ||||| || ||||||||||||| |||||||| || || Sbjct: 524 gttattgctaaagagaggaaaggagattatttgggaaagactgttcaggttgttcctcat 583 Query: 505 atcacaaatgccatacaagattggatcgag 534 |||| |||| || ||||||||||||||| Sbjct: 584 gtcactgatgcaattcaagattggatcgag 613
>gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0040E06, complete sequence Length = 160907 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 156 gatgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggc 215 |||||||||||| |||||| || |||||| | ||||| ||||| |||||||||||||| Sbjct: 104537 gatgaagtacgtggtggtgatgggaggcgtgatcagcggcctcggcaagggggtgacggc 104596 Query: 216 aagcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagatcg 274 |||||||| |||||||| |||||||| |||||||||||| |||| ||||| ||||||| Sbjct: 104597 gagcagcattggcgtcgtcctcaaggcgtgcggcctccgcgttacgtccattaagatcg 104655 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Minus Query: 156 gatgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggc 215 |||||||||||| |||||| || |||||| | ||||| ||||| |||||||||||||| Sbjct: 69157 gatgaagtacgtggtggtgatgggaggcgtgatcagcggcctcggcaagggggtgacggc 69098 Query: 216 aagcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagatcg 274 |||||||| |||||||| |||||||| |||||||||||| |||| ||||| ||||||| Sbjct: 69097 gagcagcattggcgtcgtcctcaaggcgtgcggcctccgcgttacgtccattaagatcg 69039 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 ||||||||| ||||| | ||||||||||| || |||||| |||||| |||||||||||| Sbjct: 68427 gatccttactttaacgctgatgctggaactatatctcctcatgaacacggcgaagtgttt 68368 Query: 334 gttctagatgatggtggcgaggt 356 || ||||||||||||| ||||| Sbjct: 68367 gtattagatgatggtggtgaggt 68345 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 ||||||||| ||||| | ||||| ||||| || |||||| |||||| |||||||||||| Sbjct: 105677 gatccttactttaacgctgatgccggaactatatctcctcatgaacacggcgaagtgttt 105736 Query: 334 gttctagatgatggtggcgaggt 356 || ||||||||||||| ||||| Sbjct: 105737 gtgttagatgatggtggtgaggt 105759 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 353 aggtggacttggatctcggaaactatgagaggtttctagaaattaagctgacacgcgaca 412 |||||||||||||||| |||||||||||||||||||| || ||||| || || || ||| Sbjct: 68257 aggtggacttggatcttggaaactatgagaggtttctcgacattaaactaactcgagacc 68198 Query: 413 ataacataactactggaaagatc 435 ||| |||||| | ||||||||| Sbjct: 68197 atagcataaccgccggaaagatc 68175 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 357 ggacttggatctcggaaactatgagaggtttctagaaattaa 398 |||||||||||| || ||||||||||||||||| || ||||| Sbjct: 105850 ggacttggatcttgggaactatgagaggtttctcgacattaa 105891 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 491 aggttgtcccgcacatcacaaatgccatacaagattggatcgagcgtgt 539 ||||| |||| || || ||||||| |||||||||||||| |||||||| Sbjct: 106469 aggttatcccacatattacaaatgagatacaagattggattgagcgtgt 106517
>gb|AY742304.1| Malus x domestica CTP synthase 1b mRNA, partial cds Length = 345 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 ||||||||||| ||||||||||| ||||| ||||| || |||| ||||| ||||||||| Sbjct: 235 gatccttacctaaacaccgatgccggaactatgtccccagttgagcatggtgaagtgttt 294 Query: 334 gttctagatgatggtggcgaggtggacttggatctcggaaactatga 380 || | ||||||||||| |||||||||||||| || ||||||||||| Sbjct: 295 gtgttggatgatggtggtgaggtggacttggaccttggaaactatga 341
>gb|AY742303.1| Malus x domestica CTP synthase 1a mRNA, partial cds Length = 664 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 ||||||||||| ||||||||||| ||||| ||||| || |||| ||||| ||||||||| Sbjct: 554 gatccttacctaaacaccgatgccggaactatgtccccagttgagcatggtgaagtgttt 613 Query: 334 gttctagatgatggtggcgaggtggacttggatctcggaaactatga 380 || | ||||||||||| |||||||||||||| || ||||||||||| Sbjct: 614 gtgttggatgatggtggtgaggtggacttggaccttggaaactatga 660
>ref|NM_118151.3| Arabidopsis thaliana CTP synthase/ catalytic AT4G20320 mRNA, complete cds Length = 2348 Score = 97.6 bits (49), Expect = 4e-17 Identities = 133/161 (82%) Strand = Plus / Plus Query: 271 atcgatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtg 330 |||||||||||| | |||| |||||||| |||||||| ||| |||||||||| ||||| Sbjct: 202 atcgatccttacttaaacattgatgctgggaccatgtcacctattgaacatggtgaagtt 261 Query: 331 tttgttctagatgatggtggcgaggtggacttggatctcggaaactatgagaggtttcta 390 | || | ||||||||||||||||| || ||||||| || |||||||||||||| | Sbjct: 262 tacgtcttggatgatggtggcgaggttgatctggatcttgggaactatgagaggttcatg 321 Query: 391 gaaattaagctgacacgcgacaataacataactactggaaa 431 || ||||||||||| | || || ||||||||||||||||| Sbjct: 322 gatattaagctgactagtgaaaacaacataactactggaaa 362
>gb|AC155884.2| Medicago truncatula chromosome 2 BAC clone mth2-10d10, complete sequence Length = 79222 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 ||||| ||||| ||||| ||||| || || |||||||||||||||||||| ||||||| | Sbjct: 54365 gatccctacctgaacactgatgcggggacaatgtctccttttgaacatggagaagtgtat 54424 Query: 334 gttctagatgatggtggcgaggt 356 || |||||||||||||| ||||| Sbjct: 54425 gtcctagatgatggtggtgaggt 54447 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 401 tgacacgcgacaataacataactactggaaa 431 |||| |||||||||||||| ||||||||||| Sbjct: 54766 tgacccgcgacaataacatcactactggaaa 54796
>ref|NM_116444.2| Arabidopsis thaliana CTP synthase/ catalytic AT4G02120 mRNA, complete cds Length = 1890 Score = 81.8 bits (41), Expect = 2e-12 Identities = 161/201 (80%) Strand = Plus / Plus Query: 156 gatgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggc 215 |||||||||||| ||||||| || || |||||||| ||||| || || || || ||||| Sbjct: 32 gatgaagtacgtattggtgactggaggagtggtgagtgggcttggcaaaggcgttacggc 91 Query: 216 aagcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagatcga 275 || || |||||||| ||||| || || || ||||| | |||||||||| || || || Sbjct: 92 gagtagtatcggcgtggtgcttaaagcttgtggccttggagttacctccattaaaattga 151 Query: 276 tccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgt 335 ||| || || ||||| |||||||| || ||||| |||||||| ||||| || || ||||| Sbjct: 152 tccatatctgaacactgatgctggtacaatgtccccttttgagcatggagaggtttttgt 211 Query: 336 tctagatgatggtggcgaggt 356 || ||||||||||| ||||| Sbjct: 212 actcgatgatggtggagaggt 232
>gb|AY140051.1| Arabidopsis thaliana CTP synthase-like protein (At4g02120) mRNA, complete cds Length = 1889 Score = 81.8 bits (41), Expect = 2e-12 Identities = 161/201 (80%) Strand = Plus / Plus Query: 156 gatgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggc 215 |||||||||||| ||||||| || || |||||||| ||||| || || || || ||||| Sbjct: 32 gatgaagtacgtattggtgactggaggagtggtgagtgggcttggcaaaggcgttacggc 91 Query: 216 aagcagcatcggcgtcgtgctcaaggcctgcggcctccgcattacctccatcaagatcga 275 || || |||||||| ||||| || || || ||||| | |||||||||| || || || Sbjct: 92 gagtagtatcggcgtggtgcttaaagcttgtggccttggagttacctccattaaaattga 151 Query: 276 tccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgt 335 ||| || || ||||| |||||||| || ||||| |||||||| ||||| || || ||||| Sbjct: 152 tccatatctgaacactgatgctggtacaatgtccccttttgagcatggagaggtttttgt 211 Query: 336 tctagatgatggtggcgaggt 356 || ||||||||||| ||||| Sbjct: 212 actcgatgatggtggagaggt 232
>gb|AC069474.4|AC069474 Arabidopsis thaliana chromosome 3 BAC T2E22 genomic sequence, complete sequence Length = 105768 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 |||||||| |||||||| ||||||||||| |||||||| ||||| ||||| ||||| ||| Sbjct: 3988 gatccttatcttaacactgatgctggaacaatgtctccgtttgagcatggagaagtattt 4047 Query: 334 gttctagatgatggtggcgaggt 356 || | ||||||||||| ||||| Sbjct: 4048 gtattggatgatggtggagaggt 4070 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 409 gacaataacataactactggaaagatctaccag 441 ||||| || ||||||||||||||||| |||||| Sbjct: 4207 gacaacaatataactactggaaagatataccag 4239
>dbj|AB024033.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MBK21 Length = 79125 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 |||||||| |||||||| ||||||||||| |||||||| ||||| ||||| ||||| ||| Sbjct: 8718 gatccttatcttaacactgatgctggaacaatgtctccgtttgagcatggagaagtattt 8659 Query: 334 gttctagatgatggtggcgaggt 356 || | ||||||||||| ||||| Sbjct: 8658 gtattggatgatggtggagaggt 8636 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 gacaataacataactactggaaagatctaccag 441 ||||| || ||||||||||||||||| |||||| Sbjct: 8499 gacaacaatataactactggaaagatataccag 8467
>gb|BC084164.1| Xenopus laevis hypothetical LOC495047, mRNA (cDNA clone MGC:79082 IMAGE:5047203), complete cds Length = 4551 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 427 ggaaagatctaccagtctgttattaataaagaaagagagggagaatacctgggaaagact 486 |||||||||||||||||||| |||||||| || ||| |||| || ||||| ||||| ||| Sbjct: 372 ggaaagatctaccagtctgtgattaataaggagagaaagggtgattaccttggaaaaact 431 Query: 487 gtgcaggttgtcccgcacatcacaaatgccatacaaga 524 || || ||||| || ||||||||| |||| || ||||| Sbjct: 432 gttcaagttgttcctcacatcacagatgcaattcaaga 469
>ref|NM_129042.1| Arabidopsis thaliana CTP synthase/ catalytic AT2G34890 mRNA, complete cds Length = 1794 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 292 gatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatgatggtggc 351 |||||||||||||| || |||| |||||||| ||||||||||| | || |||||| | Sbjct: 136 gatgctggaaccatatccccttacgaacatggagaagtgtttgtcttggacgatggtagt 195 Query: 352 gaggtggacttggatctcggaaactatgagaggtttctaga 392 |||||||| | ||||| |||||||| |||||||||||||| Sbjct: 196 gaggtggatcttgatcttggaaactacgagaggtttctaga 236
>emb|BX025441.1|CNS08RSL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA39AB06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 888 Score = 73.8 bits (37), Expect = 5e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 265 atcaagatcgatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggc 324 |||||||||||||||||| | |||| ||| || ||||| | || || | ||||| || Sbjct: 341 atcaagatcgatccttacatcaacatcgacgcaggaacgttctccccatacgaacacggt 400 Query: 325 gaagtgtttgttctagatgatggtggcgaggtggacttggatctcggaaactatgag 381 || ||||||||||| |||||||| || |||||||| |||||||| |||||||||||| Sbjct: 401 gaggtgtttgttcttgatgatggcggtgaggtggatttggatctgggaaactatgag 457
>emb|BX017139.1|CNS08LDZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA25DA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 714 Score = 73.8 bits (37), Expect = 5e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 265 atcaagatcgatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggc 324 |||||||||||||||||| | |||| ||| || ||||| | || || | ||||| || Sbjct: 378 atcaagatcgatccttacatcaacatcgacgcaggaacgttctccccatacgaacacggt 437 Query: 325 gaagtgtttgttctagatgatggtggcgaggtggacttggatctcggaaactatgag 381 || ||||||||||| |||||||| || |||||||| |||||||| |||||||||||| Sbjct: 438 gaggtgtttgttcttgatgatggcggtgaggtggatttggatctgggaaactatgag 494
>ref|XM_318656.2| Anopheles gambiae str. PEST ENSANGP00000010220 (ENSANGG00000007731), partial mRNA Length = 1975 Score = 73.8 bits (37), Expect = 5e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 265 atcaagatcgatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggc 324 |||||||||||||||||| | |||| ||| || ||||| | || || | ||||| || Sbjct: 338 atcaagatcgatccttacatcaacatcgacgcaggaacgttctccccatacgaacacggt 397 Query: 325 gaagtgtttgttctagatgatggtggcgaggtggacttggatctcggaaactatgag 381 || ||||||||||| |||||||| || |||||||| |||||||| |||||||||||| Sbjct: 398 gaggtgtttgttcttgatgatggcggtgaggtggatttggatctgggaaactatgag 454
>gb|AC122168.14| Medicago truncatula clone mth2-4o4, complete sequence Length = 120886 Score = 69.9 bits (35), Expect = 8e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 176 ccggcggcgtggtgagcgggctcgggaagggggtgacggcaagcagcatcggcgtcgtgc 235 ||||||| || || ||||| ||||| || || || || || ||||||||||||||||| | Sbjct: 92788 ccggcggagtcgttagcggcctcggcaaaggcgtcaccgccagcagcatcggcgtcgtcc 92729 Query: 236 tcaaggcctgcggcctccgcattacctccatcaagatcg 274 |||| ||||||||||||||| | || |||||||| |||| Sbjct: 92728 tcaaagcctgcggcctccgcgtcacttccatcaaaatcg 92690 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 295 gctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatgatggtggcgag 354 ||||| ||||||||||| ||||||||||| || || |||||||| |||||||| || ||| Sbjct: 92579 gctggtaccatgtctccgtttgaacatggagaggtttttgttcttgatgatggcggagag 92520 Query: 355 gt 356 || Sbjct: 92519 gt 92518
>gb|BC003257.1| Mus musculus cytidine 5'-triphosphate synthase 2, mRNA (cDNA clone MGC:5926 IMAGE:3500778), complete cds Length = 2113 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 284 ttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatg 343 |||||| |||||||||||| | || |||| ||||||||| ||||| |||||| || ||| Sbjct: 195 ttaacatcgatgctggaactttctcaccttatgaacatggtgaagtatttgttttaaatg 254 Query: 344 atggtggcgaggtggacttggatctcggaaactatga 380 ||||||| || || || ||||| || ||||||||||| Sbjct: 255 atggtggagaagttgatttggaccttggaaactatga 291
>ref|NM_018737.2| Mus musculus cytidine 5'-triphosphate synthase 2 (Ctps2), mRNA Length = 3284 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 284 ttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatg 343 |||||| |||||||||||| | || |||| ||||||||| ||||| |||||| || ||| Sbjct: 403 ttaacatcgatgctggaactttctcaccttatgaacatggtgaagtatttgttttaaatg 462 Query: 344 atggtggcgaggtggacttggatctcggaaactatga 380 ||||||| || || || ||||| || ||||||||||| Sbjct: 463 atggtggagaagttgatttggaccttggaaactatga 499
>dbj|AK150966.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830018N24 product:cytidine 5'-triphosphate synthase 2, full insert sequence Length = 2248 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 284 ttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatg 343 |||||| |||||||||||| | || |||| ||||||||| ||||| |||||| || ||| Sbjct: 354 ttaacatcgatgctggaactttctcaccttatgaacatggtgaagtatttgttttaaatg 413 Query: 344 atggtggcgaggtggacttggatctcggaaactatga 380 ||||||| || || || ||||| || ||||||||||| Sbjct: 414 atggtggagaagttgatttggaccttggaaactatga 450
>dbj|AK151597.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830032A12 product:cytidine 5'-triphosphate synthase 2, full insert sequence Length = 2248 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 284 ttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatg 343 |||||| |||||||||||| | || |||| ||||||||| ||||| |||||| || ||| Sbjct: 354 ttaacatcgatgctggaactttctcaccttatgaacatggtgaagtatttgttttaaatg 413 Query: 344 atggtggcgaggtggacttggatctcggaaactatga 380 ||||||| || || || ||||| || ||||||||||| Sbjct: 414 atggtggagaagttgatttggaccttggaaactatga 450
>dbj|AK164206.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630049F24 product:cytidine 5'-triphosphate synthase 2, full insert sequence Length = 3224 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 284 ttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatg 343 |||||| |||||||||||| | || |||| ||||||||| ||||| |||||| || ||| Sbjct: 314 ttaacatcgatgctggaactttctcaccttatgaacatggtgaagtatttgttttaaatg 373 Query: 344 atggtggcgaggtggacttggatctcggaaactatga 380 ||||||| || || || ||||| || ||||||||||| Sbjct: 374 atggtggagaagttgatttggaccttggaaactatga 410
>dbj|AK161564.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330413O21 product:cytidine 5'-triphosphate synthase 2, full insert sequence Length = 1666 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 284 ttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatg 343 |||||| |||||||||||| | || |||| ||||||||| ||||| |||||| || ||| Sbjct: 325 ttaacatcgatgctggaactttctcaccttatgaacatggtgaagtatttgttttaaatg 384 Query: 344 atggtggcgaggtggacttggatctcggaaactatga 380 ||||||| || || || ||||| || ||||||||||| Sbjct: 385 atggtggagaagttgatttggaccttggaaactatga 421
>dbj|AK052854.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched library, clone:D830005I19 product:cytidine 5'-triphosphate synthase 2, full insert sequence Length = 3284 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 284 ttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatg 343 |||||| |||||||||||| | || |||| ||||||||| ||||| |||||| || ||| Sbjct: 403 ttaacatcgatgctggaactttctcaccttatgaacatggtgaagtatttgttttaaatg 462 Query: 344 atggtggcgaggtggacttggatctcggaaactatga 380 ||||||| || || || ||||| || ||||||||||| Sbjct: 463 atggtggagaagttgatttggaccttggaaactatga 499
>dbj|AK084595.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330020A01 product:cytidine 5'-triphosphate synthase 2, full insert sequence Length = 3149 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 284 ttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatg 343 |||||| |||||||||||| | || |||| ||||||||| ||||| |||||| || ||| Sbjct: 284 ttaacatcgatgctggaactttctcaccttatgaacatggtgaagtatttgttttaaatg 343 Query: 344 atggtggcgaggtggacttggatctcggaaactatga 380 ||||||| || || || ||||| || ||||||||||| Sbjct: 344 atggtggagaagttgatttggaccttggaaactatga 380
>dbj|AK032018.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330547G18 product:cytidine 5'-triphosphate synthase 2, full insert sequence Length = 3100 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 284 ttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatg 343 |||||| |||||||||||| | || |||| ||||||||| ||||| |||||| || ||| Sbjct: 214 ttaacatcgatgctggaactttctcaccttatgaacatggtgaagtatttgttttaaatg 273 Query: 344 atggtggcgaggtggacttggatctcggaaactatga 380 ||||||| || || || ||||| || ||||||||||| Sbjct: 274 atggtggagaagttgatttggaccttggaaactatga 310
>dbj|AK085381.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630018O13 product:cytidine 5'-triphosphate synthase 2, full insert sequence Length = 3333 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 284 ttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatg 343 |||||| |||||||||||| | || |||| ||||||||| ||||| |||||| || ||| Sbjct: 262 ttaacatcgatgctggaactttctcaccttatgaacatggtgaagtatttgttttaaatg 321 Query: 344 atggtggcgaggtggacttggatctcggaaactatga 380 ||||||| || || || ||||| || ||||||||||| Sbjct: 322 atggtggagaagttgatttggaccttggaaactatga 358
>gb|U49385.1|MMU49385 Mus musculus CTP synthetase homolog (CTPsH) mRNA, complete cds Length = 2270 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 284 ttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatg 343 |||||| |||||||||||| | || |||| ||||||||| ||||| |||||| || ||| Sbjct: 377 ttaacatcgatgctggaactttctcaccttatgaacatggtgaagtatttgttttaaatg 436 Query: 344 atggtggcgaggtggacttggatctcggaaactatga 380 ||||||| || || || ||||| || ||||||||||| Sbjct: 437 atggtggagaagttgatttggaccttggaaactatga 473
>gb|AC158183.2| Selaginella moellendorffii clone JGIASXY-5D8, complete sequence Length = 39479 Score = 63.9 bits (32), Expect = 5e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 175 accggcggcgtggtgagcgggctcgggaagggggtgacggcaagcagcatcggcgtcgtg 234 ||||| || ||||||||||| ||||| |||||||| || || |||||||| ||| | || Sbjct: 9790 accggtggtgtggtgagcggcctcggtaagggggtaacagctagcagcattggcctgctg 9731 Query: 235 ctcaaggcctgcggcctccgcattacctccatcaagatcg 274 |||||| | || ||||| ||| | |||||||||||||||| Sbjct: 9730 ctcaagtcatgtggccttcgcgtcacctccatcaagatcg 9691 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 475 ctgggaaagactgtgcaggtt 495 ||||||||||||||||||||| Sbjct: 9321 ctgggaaagactgtgcaggtt 9301
>gb|AC004135.1|AC004135 Genomic sequence for Arabidopsis thaliana BAC T17H7 from Chromosome 1, complete sequence Length = 73805 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 |||||||| || ||||| ||||||||||| |||||||| |||||||| || ||||| ||| Sbjct: 28697 gatccttatctgaacactgatgctggaactatgtctccatttgaacacggtgaagttttt 28638 Query: 334 gttctagatgatggtggcgaggt 356 || | || |||||||| ||||| Sbjct: 28637 gtcttggacgatggtggtgaggt 28615 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Minus Query: 364 gatctcggaaactatgagaggtttctagaaattaagctgacacgcgacaataacataact 423 ||||| |||||||| || ||||||||||| || || | ||| | ||||||||||| ||| Sbjct: 28512 gatcttggaaactacgaaaggtttctagatatcaaattaacaagagacaataacatcact 28453 Query: 424 actgg 428 ||||| Sbjct: 28452 actgg 28448
>emb|AL009197.1|SPAC10F6 S.pombe chromosome I cosmid c10F6 Length = 38139 Score = 60.0 bits (30), Expect = 8e-06 Identities = 75/90 (83%) Strand = Plus / Minus Query: 292 gatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatgatggtggc 351 |||||||| || |||||||| |||||||||| ||||| |||||| | ||||||| || Sbjct: 10099 gatgctggcactatgtctccccttgaacatggggaagtttttgttttgaatgatggcggt 10040 Query: 352 gaggtggacttggatctcggaaactatgag 381 || || || |||||||| |||||||||||| Sbjct: 10039 gaagtcgatttggatcttggaaactatgag 10010
>ref|NM_001018651.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC10F6.03c), partial mRNA Length = 1803 Score = 60.0 bits (30), Expect = 8e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 292 gatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatgatggtggc 351 |||||||| || |||||||| |||||||||| ||||| |||||| | ||||||| || Sbjct: 136 gatgctggcactatgtctccccttgaacatggggaagtttttgttttgaatgatggcggt 195 Query: 352 gaggtggacttggatctcggaaactatgag 381 || || || |||||||| |||||||||||| Sbjct: 196 gaagtcgatttggatcttggaaactatgag 225
>ref|XM_716917.1| Candida albicans SC5314 hypothetical protein (CaO19_11423), mRNA Length = 1722 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 286 aacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatgat 345 |||| ||||||||| ||||||||||| || |||||||| ||| |||||| |||||||| Sbjct: 130 aacatcgatgctggtaccatgtctccattagaacatggggaatgttttgttttagatgat 189 Query: 346 ggtgg 350 ||||| Sbjct: 190 ggtgg 194
>ref|XM_716757.1| Candida albicans SC5314 hypothetical protein (CaO19_3941), mRNA Length = 1722 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 286 aacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatgat 345 |||| ||||||||| ||||||||||| || |||||||| ||| |||||| |||||||| Sbjct: 130 aacatcgatgctggtaccatgtctccattagaacatggggaatgttttgttttagatgat 189 Query: 346 ggtgg 350 ||||| Sbjct: 190 ggtgg 194
>gb|BC058048.1| Danio rerio CTP synthase, mRNA (cDNA clone MGC:65828 IMAGE:6794756), complete cds Length = 2172 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 319 catggcgaagtgtttgttctagatgatggtggcgaggtggacttggatctcggaaactat 378 ||||| || ||||||||| | |||||||| || || || || |||||||| ||||||||| Sbjct: 299 catggtgaggtgtttgttttggatgatgggggtgaagttgatttggatctgggaaactat 358 Query: 379 gagaggtttctagaaattaagctgacacgcgacaataacataactactggaaagatctac 438 || | ||||| || || | ||| || ||||||||| | || || |||||||||||| Sbjct: 359 gaacgttttctggacatcaggctcaccaaagacaataacctgaccacaggaaagatctac 418 Query: 439 cagtctgttattaataaaga 458 |||||||| ||||| ||||| Sbjct: 419 cagtctgtcattaacaaaga 438
>gb|BC044325.1| Xenopus laevis cytidine 5'-triphosphate synthase, mRNA (cDNA clone MGC:52832 IMAGE:4884716), complete cds Length = 2188 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 419 taactactggaaagatctaccagtctgttattaataaagaaagagagggagaatacctgg 478 |||| |||||||| |||||||||||||||||||| || || ||| | || || ||||| | Sbjct: 315 taacaactggaaaaatctaccagtctgttattaacaaggagagaaaaggcgattaccttg 374 Query: 479 gaaagactgtgcaggttgtcccgcacatcaca 510 |||| || || || ||||| || ||||||||| Sbjct: 375 gaaaaacagttcaagttgttcctcacatcaca 406
>ref|NM_199211.1| Danio rerio CTP synthase (ctps), mRNA Length = 2172 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 319 catggcgaagtgtttgttctagatgatggtggcgaggtggacttggatctcggaaactat 378 ||||| || ||||||||| | |||||||| || || || || |||||||| ||||||||| Sbjct: 299 catggtgaggtgtttgttttggatgatgggggtgaagttgatttggatctgggaaactat 358 Query: 379 gagaggtttctagaaattaagctgacacgcgacaataacataactactggaaagatctac 438 || | ||||| || || | ||| || ||||||||| | || || |||||||||||| Sbjct: 359 gaacgttttctggacatcaggctcaccaaagacaataacctgaccacaggaaagatctac 418 Query: 439 cagtctgttattaataaaga 458 |||||||| ||||| ||||| Sbjct: 419 cagtctgtcattaacaaaga 438
>ref|XM_446164.1| Candida glabrata CBS138, CAGL0F04433g partial mRNA Length = 1737 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 257 ttacctccatcaagatcgatccttaccttaacaccgatgctggaaccatgtctcc 311 ||||||| |||||||| ||||| ||| | |||| ||||||||| ||||||||||| Sbjct: 101 ttacctctatcaagattgatccatacatgaacatcgatgctggtaccatgtctcc 155
>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence Length = 927101 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 257 ttacctccatcaagatcgatccttaccttaacaccgatgctggaaccatgtctcc 311 ||||||| |||||||| ||||| ||| | |||| ||||||||| ||||||||||| Sbjct: 442306 ttacctctatcaagattgatccatacatgaacatcgatgctggtaccatgtctcc 442360
>emb|AL161552.2|ATCHRIV52 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 52 Length = 198427 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 ||||||||| | |||| |||||||| |||||||| ||| |||||||||| ||||| | Sbjct: 173105 gatccttacttaaacattgatgctgggaccatgtcacctattgaacatggtgaagtttac 173164 Query: 334 gttctagatgatggtggcgaggt 356 || | ||||||||||||||||| Sbjct: 173165 gtcttggatgatggtggcgaggt 173187 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 362 tggatctcggaaactatgagaggtttctagaaattaagctgacacgcgacaataacataa 421 ||||||| || |||||||||||||| | || ||||||||||| | || || ||||||| Sbjct: 173310 tggatcttgggaactatgagaggttcatggatattaagctgactagtgaaaacaacataa 173369 Query: 422 ctactggaaa 431 |||||||||| Sbjct: 173370 ctactggaaa 173379
>emb|AL161493.2|ATCHRIV5 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 5 Length = 198220 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 286 aacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatgat 345 ||||| |||||||| || ||||| |||||||| ||||| || || ||||| || |||||| Sbjct: 169947 aacactgatgctggtacaatgtccccttttgagcatggagaggtttttgtactcgatgat 170006 Query: 346 ggtggcgaggt 356 ||||| ||||| Sbjct: 170007 ggtggagaggt 170017 Score = 42.1 bits (21), Expect = 1.9 Identities = 66/81 (81%) Strand = Plus / Plus Query: 156 gatgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggc 215 |||||||||||| ||||||| || || |||||||| ||||| || || || || ||||| Sbjct: 169741 gatgaagtacgtattggtgactggaggagtggtgagtgggcttggcaaaggcgttacggc 169800 Query: 216 aagcagcatcggcgtcgtgct 236 || || |||||||| ||||| Sbjct: 169801 gagtagtatcggcgtggtgct 169821
>emb|AL022224.1|ATF1C12 Arabidopsis thaliana DNA chromosome 4, BAC clone F1C12 (ESSA project) Length = 111945 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 274 gatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgttt 333 ||||||||| | |||| |||||||| |||||||| ||| |||||||||| ||||| | Sbjct: 105682 gatccttacttaaacattgatgctgggaccatgtcacctattgaacatggtgaagtttac 105741 Query: 334 gttctagatgatggtggcgaggt 356 || | ||||||||||||||||| Sbjct: 105742 gtcttggatgatggtggcgaggt 105764 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 362 tggatctcggaaactatgagaggtttctagaaattaagctgacacgcgacaataacataa 421 ||||||| || |||||||||||||| | || ||||||||||| | || || ||||||| Sbjct: 105887 tggatcttgggaactatgagaggttcatggatattaagctgactagtgaaaacaacataa 105946 Query: 422 ctactggaaa 431 |||||||||| Sbjct: 105947 ctactggaaa 105956
>emb|CR385068.11| Zebrafish DNA sequence from clone CH211-245H7 in linkage group 19, complete sequence Length = 177489 Score = 54.0 bits (27), Expect = 5e-04 Identities = 105/131 (80%) Strand = Plus / Plus Query: 328 gtgtttgttctagatgatggtggcgaggtggacttggatctcggaaactatgagaggttt 387 ||||||||| | |||||||| || || || || |||||||| ||||||||||| | ||| Sbjct: 94307 gtgtttgttttggatgatgggggtgaagttgatttggatctgggaaactatgaacgtttt 94366 Query: 388 ctagaaattaagctgacacgcgacaataacataactactggaaagatctaccagtctgtt 447 || || || | ||| || ||||||||| | || || |||||||||||||||||||| Sbjct: 94367 ctggacatcaggctcaccaaagacaataacctgaccacaggaaagatctaccagtctgtc 94426 Query: 448 attaataaaga 458 ||||| ||||| Sbjct: 94427 attaacaaaga 94437
>ref|XM_233467.3| PREDICTED: Rattus norvegicus cytidine 5'-triphosphate synthase (predicted) (Ctps_predicted), mRNA Length = 3596 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 284 ttaacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatg 343 |||||| |||||| ||||| | ||||||| ||||||||| ||||| ||||| || |||| Sbjct: 1163 ttaacatcgatgcaggaacattctctccttatgaacatggagaagtctttgtgctggatg 1222 Query: 344 atggtgg 350 ||||||| Sbjct: 1223 atggtgg 1229 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 484 actgtgcaggttgtcccgcacatcacaaatgccatacaaga 524 ||||| ||||||||||| ||||||||| |||| || ||||| Sbjct: 1363 actgttcaggttgtccctcacatcacagatgcaattcaaga 1403
>gb|AF001308.1|ATAF001308 Arabidopsis thaliana BAC T10M13 from chromosome IV, from 10.8 cM to 11.6 cM, complete sequence Length = 105654 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 286 aacaccgatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatgat 345 ||||| |||||||| || ||||| |||||||| ||||| || || ||||| || |||||| Sbjct: 67343 aacactgatgctggtacaatgtccccttttgagcatggagaggtttttgtactcgatgat 67402 Query: 346 ggtggcgaggt 356 ||||| ||||| Sbjct: 67403 ggtggagaggt 67413 Score = 42.1 bits (21), Expect = 1.9 Identities = 66/81 (81%) Strand = Plus / Plus Query: 156 gatgaagtacgtcctggtgaccggcggcgtggtgagcgggctcgggaagggggtgacggc 215 |||||||||||| ||||||| || || |||||||| ||||| || || || || ||||| Sbjct: 67137 gatgaagtacgtattggtgactggaggagtggtgagtgggcttggcaaaggcgttacggc 67196 Query: 216 aagcagcatcggcgtcgtgct 236 || || |||||||| ||||| Sbjct: 67197 gagtagtatcggcgtggtgct 67217
>gb|BC085949.1| Rattus norvegicus cytidine triphosphate synthase II, mRNA (cDNA clone MGC:95203 IMAGE:7132135), complete cds Length = 2153 Score = 52.0 bits (26), Expect = 0.002 Identities = 95/118 (80%) Strand = Plus / Plus Query: 263 ccatcaagatcgatccttaccttaacaccgatgctggaaccatgtctccttttgaacatg 322 ||||||||||||| || ||| |||||| |||||||| || | || |||| ||||||| Sbjct: 197 ccatcaagatcgacccctacattaacattgatgctggcactttctcaccttacgaacatg 256 Query: 323 gcgaagtgtttgttctagatgatggtggcgaggtggacttggatctcggaaactatga 380 | ||||| |||||| || |||||||||| || || || ||||| || ||||| ||||| Sbjct: 257 gtgaagtatttgttttaaatgatggtggagaagttgatttggaccttggaaattatga 314
>gb|BC050512.1| Danio rerio CTP synthase, mRNA (cDNA clone IMAGE:5602452), containing frame-shift errors Length = 2035 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 319 catggcgaagtgtttgttctagatgatggtggcgaggtggacttggatctcggaaactat 378 ||||| || ||||||||| | |||||||| || ||||| || |||||||| ||||||||| Sbjct: 322 catggtgaggtgtttgttttggatgatgggggtgaggttgatttggatctgggaaactat 381 Query: 379 ga 380 || Sbjct: 382 ga 383
>ref|NM_001034998.1| Rattus norvegicus cytidine triphosphate synthase II (Ctps2), mRNA Length = 2153 Score = 52.0 bits (26), Expect = 0.002 Identities = 95/118 (80%) Strand = Plus / Plus Query: 263 ccatcaagatcgatccttaccttaacaccgatgctggaaccatgtctccttttgaacatg 322 ||||||||||||| || ||| |||||| |||||||| || | || |||| ||||||| Sbjct: 197 ccatcaagatcgacccctacattaacattgatgctggcactttctcaccttacgaacatg 256 Query: 323 gcgaagtgtttgttctagatgatggtggcgaggtggacttggatctcggaaactatga 380 | ||||| |||||| || |||||||||| || || || ||||| || ||||| ||||| Sbjct: 257 gtgaagtatttgttttaaatgatggtggagaagttgatttggaccttggaaattatga 314
>emb|CT485693.1| Xenopus tropicalis finished cDNA, clone TEgg031m17 Length = 3634 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 427 ggaaagatctaccagtctgttattaataaagaaagagagggagaatacctgggaaagact 486 ||||| |||||||||||||||||||| || || ||| | || || ||||| ||||| || Sbjct: 334 ggaaaaatctaccagtctgttattaacaaggagagaaaaggcgattaccttggaaaaacc 393 Query: 487 gtgcaggttgtcccgcacatcacaaatgccatacaaga 524 || || ||||| || ||||||||| |||| || ||||| Sbjct: 394 gttcaagttgttcctcacatcacagatgcaatccaaga 431
>ref|XM_635962.1| Dictyostelium discoideum CTP synthase (DDB0230162), partial mRNA Length = 1710 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Plus Query: 292 gatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatgatggtggc 351 |||||||| |||||| ||| || |||||||| ||||| ||||| ||||||||||||| Sbjct: 136 gatgctggtaccatgagtccattcgaacatggtgaagtatttgtattagatgatggtggt 195 Query: 352 gaggtggacttggatctcggaaactatga 380 || || || || ||||| ||||| ||||| Sbjct: 196 gaagtagatttagatcttggaaattatga 224
>emb|AL445063.1|TACID1 Thermoplasma acidophilum complete genome; segment 1/5 Length = 344000 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 317 aacatggcgaagtgtttgttctagatgatggtggcgaggtggacttggatctcggaaact 376 ||||||| || || |||||||| || |||||||||||||| ||| | ||||| || |||| Sbjct: 42403 aacatggagaggtctttgttctggacgatggtggcgaggttgaccttgatcttggcaact 42344 Query: 377 atgag 381 ||||| Sbjct: 42343 atgag 42339
>ref|NM_016748.1| Mus musculus cytidine 5'-triphosphate synthase (Ctps), mRNA Length = 2681 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 307 tctccttttgaacatggcgaagtgtttgttctagatgatggtgg 350 ||||||| ||||||||| ||||| ||||| || ||||||||||| Sbjct: 262 tctccttatgaacatggagaagtctttgtgctggatgatggtgg 305 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 481 aagactgtgcaggttgtcccgcacatcac 509 |||||||| ||||||||||| |||||||| Sbjct: 436 aagactgtccaggttgtccctcacatcac 464
>gb|BC006698.1| Mus musculus cytidine 5'-triphosphate synthase, mRNA (cDNA clone MGC:5946 IMAGE:3498717), complete cds Length = 2762 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 307 tctccttttgaacatggcgaagtgtttgttctagatgatggtgg 350 ||||||| ||||||||| ||||| ||||| || ||||||||||| Sbjct: 264 tctccttatgaacatggagaagtctttgtgctggatgatggtgg 307 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 481 aagactgtgcaggttgtcccgcacatcac 509 |||||||| ||||||||||| |||||||| Sbjct: 438 aagactgtccaggttgtccctcacatcac 466
>ref|XM_786061.1| PREDICTED: Strongylocentrotus purpuratus similar to cytidine triphosphate synthase II (LOC586273), partial mRNA Length = 696 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 466 ggagaatacctgggaaagactgtgcaggttgtcccgcacatcac 509 ||||| ||||| ||||||||||| || |||||||| |||||||| Sbjct: 568 ggagactaccttggaaagactgtacaagttgtccctcacatcac 611
>gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I3 map ve016, complete sequence Length = 108484 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Minus Query: 292 gatgctggaaccatgtctccttttgaacatggcgaagtgtttgt 335 |||||||||||||| || |||| |||||||| ||||||||||| Sbjct: 49729 gatgctggaaccatatccccttacgaacatggagaagtgtttgt 49686 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 364 gatctcggaaactatgagaggtttctaga 392 ||||| |||||||| |||||||||||||| Sbjct: 49571 gatcttggaaactacgagaggtttctaga 49543
>dbj|AK148259.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370067N16 product:cytidine 5'-triphosphate synthase, full insert sequence Length = 2051 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 307 tctccttttgaacatggcgaagtgtttgttctagatgatggtgg 350 ||||||| ||||||||| ||||| ||||| || ||||||||||| Sbjct: 238 tctccttatgaacatggagaagtctttgtgctggatgatggtgg 281 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 481 aagactgtgcaggttgtcccgcacatcac 509 |||||||| ||||||||||| |||||||| Sbjct: 412 aagactgtccaggttgtccctcacatcac 440
>dbj|AK146476.1| Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920011H05 product:cytidine 5'-triphosphate synthase, full insert sequence Length = 2708 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 307 tctccttttgaacatggcgaagtgtttgttctagatgatggtgg 350 ||||||| ||||||||| ||||| ||||| || ||||||||||| Sbjct: 290 tctccttatgaacatggagaagtctttgtgctggatgatggtgg 333 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 481 aagactgtgcaggttgtcccgcacatcac 509 |||||||| ||||||||||| |||||||| Sbjct: 464 aagactgtccaggttgtccctcacatcac 492
>dbj|AK161110.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732440A01 product:cytidine 5'-triphosphate synthase, full insert sequence Length = 2366 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 307 tctccttttgaacatggcgaagtgtttgttctagatgatggtgg 350 ||||||| ||||||||| ||||| ||||| || ||||||||||| Sbjct: 237 tctccttatgaacatggagaagtctttgtgctggatgatggtgg 280 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 481 aagactgtgcaggttgtcccgcacatcac 509 |||||||| ||||||||||| |||||||| Sbjct: 411 aagactgtccaggttgtccctcacatcac 439
>dbj|AK164232.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030025G16 product:cytidine 5'-triphosphate synthase, full insert sequence Length = 805 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 307 tctccttttgaacatggcgaagtgtttgttctagatgatggtgg 350 ||||||| ||||||||| ||||| ||||| || ||||||||||| Sbjct: 279 tctccttatgaacatggagaagtctttgtgctggatgatggtgg 322 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 481 aagactgtgcaggttgtcccgcacatcac 509 |||||||| ||||||||||| |||||||| Sbjct: 453 aagactgtccaggttgtccctcacatcac 481
>gb|U49350.1|MMU49350 Mus musculus CTP synthetase mRNA, complete cds Length = 2681 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 307 tctccttttgaacatggcgaagtgtttgttctagatgatggtgg 350 ||||||| ||||||||| ||||| ||||| || ||||||||||| Sbjct: 262 tctccttatgaacatggagaagtctttgtgctggatgatggtgg 305 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 481 aagactgtgcaggttgtcccgcacatcac 509 |||||||| ||||||||||| |||||||| Sbjct: 436 aagactgtccaggttgtccctcacatcac 464
>ref|NM_001030807.1| Gallus gallus CTP synthase II (CTPS2), mRNA Length = 2903 Score = 46.1 bits (23), Expect = 0.12 Identities = 95/119 (79%) Strand = Plus / Plus Query: 265 atcaagatcgatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggc 324 ||||| || ||||||||| | |||| ||||||||||| | || || | ||||||||| Sbjct: 346 atcaaaattgatccttacataaacatagatgctggaacgttttcaccatatgaacatgga 405 Query: 325 gaagtgtttgttctagatgatggtggcgaggtggacttggatctcggaaactatgagag 383 ||||| ||||| || |||||||||| || || ||||| ||| | ||||| |||||||| Sbjct: 406 gaagtttttgtactgaatgatggtggagaagttgacttagatttgggaaattatgagag 464 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Plus Query: 444 tgttattaataaagaaagagagggagaatacctgggaaagactgtgcaggttgt 497 |||||| ||||||||||| | || || ||||||||||||||||| || ||||| Sbjct: 525 tgttatcaataaagaaaggcacggtgattacctgggaaagactgttcaagttgt 578
>ref|NM_198889.1| Homo sapiens ankyrin repeat domain 17 (ANKRD17), transcript variant 2, mRNA Length = 8637 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 92 cgcggcggcggaggtcggaggcggcgt 118 |||||||||||||||||| |||||||| Sbjct: 207 cgcggcggcggaggtcggcggcggcgt 233
>ref|NM_032217.3| Homo sapiens ankyrin repeat domain 17 (ANKRD17), transcript variant 1, mRNA Length = 9390 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 92 cgcggcggcggaggtcggaggcggcgt 118 |||||||||||||||||| |||||||| Sbjct: 207 cgcggcggcggaggtcggcggcggcgt 233
>gb|BC043394.1| Homo sapiens ankyrin repeat domain 17, mRNA (cDNA clone IMAGE:5532386), complete cds Length = 3588 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 92 cgcggcggcggaggtcggaggcggcgt 118 |||||||||||||||||| |||||||| Sbjct: 189 cgcggcggcggaggtcggcggcggcgt 215
>gb|BC004173.2| Homo sapiens ankyrin repeat domain 17, mRNA (cDNA clone IMAGE:2907081), partial cds Length = 4613 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 92 cgcggcggcggaggtcggaggcggcgt 118 |||||||||||||||||| |||||||| Sbjct: 201 cgcggcggcggaggtcggcggcggcgt 227
>gb|AF308285.1| Homo sapiens serologically defined breast cancer antigen NY-BR-16 mRNA, complete cds Length = 3684 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 92 cgcggcggcggaggtcggaggcggcgt 118 |||||||||||||||||| |||||||| Sbjct: 207 cgcggcggcggaggtcggcggcggcgt 233
>emb|AJ851509.1| Gallus gallus mRNA for hypothetical protein, clone 4c5 Length = 2903 Score = 46.1 bits (23), Expect = 0.12 Identities = 95/119 (79%) Strand = Plus / Plus Query: 265 atcaagatcgatccttaccttaacaccgatgctggaaccatgtctccttttgaacatggc 324 ||||| || ||||||||| | |||| ||||||||||| | || || | ||||||||| Sbjct: 346 atcaaaattgatccttacataaacatagatgctggaacgttttcaccatatgaacatgga 405 Query: 325 gaagtgtttgttctagatgatggtggcgaggtggacttggatctcggaaactatgagag 383 ||||| ||||| || |||||||||| || || ||||| ||| | ||||| |||||||| Sbjct: 406 gaagtttttgtactgaatgatggtggagaagttgacttagatttgggaaattatgagag 464 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Plus Query: 444 tgttattaataaagaaagagagggagaatacctgggaaagactgtgcaggttgt 497 |||||| ||||||||||| | || || ||||||||||||||||| || ||||| Sbjct: 525 tgttatcaataaagaaaggcacggtgattacctgggaaagactgttcaagttgt 578
>gb|AC053527.8| Homo sapiens BAC clone RP11-692D12 from 4, complete sequence Length = 233250 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 92 cgcggcggcggaggtcggaggcggcgt 118 |||||||||||||||||| |||||||| Sbjct: 155679 cgcggcggcggaggtcggcggcggcgt 155653
>dbj|AB062980.1| Macaca fascicularis brain cDNA clone:QmoA-10611, full insert sequence Length = 2606 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 92 cgcggcggcggaggtcggaggcggcgt 118 |||||||||||||||||| |||||||| Sbjct: 221 cgcggcggcggaggtcggcggcggcgt 247
>ref|XM_417709.1| PREDICTED: Gallus gallus similar to CTP synthase (UTP--ammonia ligase) (CTP synthetase) (LOC419561), mRNA Length = 1247 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 340 gatgatggtggcgaggtggacttggatctcggaaacta 377 |||||||| || ||||||||| |||| ||||||||||| Sbjct: 252 gatgatggcggggaggtggacctggacctcggaaacta 289
>ref|XM_500526.1| Yarrowia lipolytica CLIB122, YALI0B05368g predicted mRNA Length = 1719 Score = 44.1 bits (22), Expect = 0.47 Identities = 52/62 (83%) Strand = Plus / Plus Query: 478 ggaaagactgtgcaggttgtcccgcacatcacaaatgccatacaagattggatcgagcgt 537 ||||||||||||||| |||| || || |||| || ||||| ||||| ||||| |||||| Sbjct: 322 ggaaagactgtgcagattgttcctcatctcaccaacgccattcaagactggattgagcgt 381 Query: 538 gt 539 || Sbjct: 382 gt 383
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Minus Query: 472 tacctgggaaagactgtgcaggttgtcccgcacatcac 509 |||||||| ||||| |||||||| ||||||||||||| Sbjct: 4801028 tacctgggcaagaccgtgcaggtgatcccgcacatcac 4800991 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accggcggcgtggtgagcgggctcgggaagggg 207 |||||||||||||||||| |||||| |||||| Sbjct: 4801325 accggcggcgtggtgagctcgctcggcaagggg 4801293
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Minus Query: 349 ggcgaggtggacttggatctcggaaactatgagaggtt 386 ||||| || ||| |||||||||||||||| |||||||| Sbjct: 147962 ggcgaagttgacctggatctcggaaactacgagaggtt 147925
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 44.1 bits (22), Expect = 0.47 Identities = 52/62 (83%) Strand = Plus / Minus Query: 478 ggaaagactgtgcaggttgtcccgcacatcacaaatgccatacaagattggatcgagcgt 537 ||||||||||||||| |||| || || |||| || ||||| ||||| ||||| |||||| Sbjct: 732649 ggaaagactgtgcagattgttcctcatctcaccaacgccattcaagactggattgagcgt 732590 Query: 538 gt 539 || Sbjct: 732589 gt 732588
>ref|XM_549820.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2990 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 cctgggaaagactgtgcaggt 494 ||||||||||||||||||||| Sbjct: 391 cctgggaaagactgtgcaggt 411
>ref|XM_629500.1| Dictyostelium discoideum hypothetical protein (DDB0219763), partial mRNA Length = 234 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 tgttattaataaagaaagaga 464 ||||||||||||||||||||| Sbjct: 57 tgttattaataaagaaagaga 77
>ref|XM_472593.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 516 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 gcggcggcggaggtcggaggcggcg 117 ||||||||||||| ||||||||||| Sbjct: 297 gcggcggcggagggcggaggcggcg 321
>emb|AL450483.1| Human DNA sequence from clone RP11-445L13 on chromosome 6 Contains a leucine aminopeptidase pseudogene and parts of 2 novel genes, complete sequence Length = 61221 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 460 agagagggagaatacctggga 480 ||||||||||||||||||||| Sbjct: 5797 agagagggagaatacctggga 5817
>ref|XM_778132.1| PREDICTED: Strongylocentrotus purpuratus similar to carnitine palmitoyltransferase 1A (LOC577934), mRNA Length = 2256 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 gagggagaatacctgggaaag 483 ||||||||||||||||||||| Sbjct: 63 gagggagaatacctgggaaag 83
>emb|BX927152.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 5/10 Length = 349799 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 465 gggagaatacctgggaaagactgtgcaggttgtcccgcacatcac 509 |||||| |||||||| || ||||||||||| |||| |||||||| Sbjct: 99623 gggagagtacctgggtaaaactgtgcaggtcatcccacacatcac 99667
>ref|NM_168606.1| Drosophila melanogaster CG6854-RC, transcript variant C (CG6854), mRNA Length = 2380 Score = 42.1 bits (21), Expect = 1.9 Identities = 72/89 (80%) Strand = Plus / Plus Query: 292 gatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatgatggtggc 351 |||||||||||| | || |||| ||| |||||||| || | ||| | || ||||| | | Sbjct: 350 gatgctggaaccttttcgccttatgagcatggcgaggtttacgttttggacgatggcgcc 409 Query: 352 gaggtggacttggatctcggaaactatga 380 |||||||| ||||||| ||||||||||| Sbjct: 410 gaggtggatctggatctgggaaactatga 438
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 gcggcggcggaggtcggaggcggcg 117 ||||||||||||| ||||||||||| Sbjct: 21794149 gcggcggcggagggcggaggcggcg 21794125
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 465 gggagaatacctgggaaagactgtgcaggttgtcccgcacatcac 509 |||||| |||||||| || ||||||||||| |||| |||||||| Sbjct: 1493848 gggagagtacctgggtaaaactgtgcaggtcatcccacacatcac 1493892
>gb|BT003255.1| Drosophila melanogaster LD25005 full insert cDNA Length = 2397 Score = 42.1 bits (21), Expect = 1.9 Identities = 72/89 (80%) Strand = Plus / Plus Query: 292 gatgctggaaccatgtctccttttgaacatggcgaagtgtttgttctagatgatggtggc 351 |||||||||||| | || |||| ||| |||||||| || | ||| | || ||||| | | Sbjct: 325 gatgctggaaccttttcgccttatgagcatggcgaggtttacgttttggacgatggcgcc 384 Query: 352 gaggtggacttggatctcggaaactatga 380 |||||||| ||||||| ||||||||||| Sbjct: 385 gaggtggatctggatctgggaaactatga 413
>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08 Length = 173729 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 cctgggaaagactgtgcaggt 494 ||||||||||||||||||||| Sbjct: 150197 cctgggaaagactgtgcaggt 150217
>dbj|AB111944.1| Oryza sativa (japonica cultivar-group) OsCSB mRNA for Cockayne syndrome group B, complete cds Length = 3564 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 cctgggaaagactgtgcaggt 494 ||||||||||||||||||||| Sbjct: 1200 cctgggaaagactgtgcaggt 1220
>dbj|AK026699.1| Homo sapiens cDNA: FLJ23046 fis, clone LNG02491 Length = 1924 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 460 agagagggagaatacctggga 480 ||||||||||||||||||||| Sbjct: 969 agagagggagaatacctggga 949
>dbj|AK064456.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-110-F11, full insert sequence Length = 2990 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 cctgggaaagactgtgcaggt 494 ||||||||||||||||||||| Sbjct: 391 cctgggaaagactgtgcaggt 411
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 296 ctggaaccatgtctccttttgaacatggcgaagtgtttgtt 336 ||||||||||| ||||||| ||||||| ||||| |||||| Sbjct: 1711551 ctggaaccatgagtccttttcaacatggagaagtttttgtt 1711591
>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20, complete sequence Length = 141915 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 gcggcggcggaggtcggaggcggcg 117 ||||||||||||| ||||||||||| Sbjct: 105766 gcggcggcggagggcggaggcggcg 105742
>emb|AL845488.7| Mouse DNA sequence from clone RP23-215P8 on chromosome 2, complete sequence Length = 153445 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 451 aataaagaaagagagggagaa 471 ||||||||||||||||||||| Sbjct: 35803 aataaagaaagagagggagaa 35783
>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455C04 Length = 147940 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 cctgggaaagactgtgcaggt 494 ||||||||||||||||||||| Sbjct: 100941 cctgggaaagactgtgcaggt 100961
>dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0402A09 Length = 141966 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 cctgggaaagactgtgcaggt 494 ||||||||||||||||||||| Sbjct: 137325 cctgggaaagactgtgcaggt 137345
>gb|AC164116.4| Mus musculus BAC clone RP24-242F4 from chromosome 13, complete sequence Length = 155449 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 attaataaagaaagagagggagaa 471 ||||||||| |||||||||||||| Sbjct: 133644 attaataaaaaaagagagggagaa 133621
>gb|DQ213789.1| Taeniopygia guttata clone 0063P0027B04 mRNA sequence Length = 1362 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 gcggcggcggaggtcggaggcggc 116 |||||||||||| ||||||||||| Sbjct: 61 gcggcggcggagctcggaggcggc 84
>ref|XM_524681.1| PREDICTED: Pan troglodytes CTP synthase (LOC469296), mRNA Length = 2667 Score = 40.1 bits (20), Expect = 7.4 Identities = 74/92 (80%) Strand = Plus / Plus Query: 424 actggaaagatctaccagtctgttattaataaagaaagagagggagaatacctgggaaag 483 ||||||||||| ||||||| ||| ||||| || ||| | | ||||| ||| |||| || Sbjct: 1189 actggaaagatataccagtatgtcattaacaaggaacggaaaggagattacttggggaaa 1248 Query: 484 actgtgcaggttgtcccgcacatcacaaatgc 515 ||||| || |||||||| || |||||| |||| Sbjct: 1249 actgtccaagttgtccctcatatcacagatgc 1280
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 465 gggagaatacctgggaaagactgtgcaggttgtccc 500 |||||| ||||||||||| ||||| ||| ||||||| Sbjct: 64599 gggagattacctgggaaaaactgttcagattgtccc 64564
>gb|L11124.1|MUSYREPD Mus musculus (clone 144) gene, Y chromosomal repetitive sequence Length = 3604 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 aaagaaagagagggagaata 473 |||||||||||||||||||| Sbjct: 33 aaagaaagagagggagaata 14
>ref|XM_883135.1| PREDICTED: Bos taurus similar to fem-1 homolog a (C.elegans), transcript variant 3 (LOC516550), mRNA Length = 3467 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ccacactcgcgccgcaccgg 85 |||||||||||||||||||| Sbjct: 316 ccacactcgcgccgcaccgg 297
>ref|XM_883130.1| PREDICTED: Bos taurus similar to fem-1 homolog a (C.elegans), transcript variant 2 (LOC516550), mRNA Length = 3464 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ccacactcgcgccgcaccgg 85 |||||||||||||||||||| Sbjct: 316 ccacactcgcgccgcaccgg 297
>ref|XM_594705.2| PREDICTED: Bos taurus similar to fem-1 homolog a (C.elegans), transcript variant 1 (LOC516550), mRNA Length = 3569 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ccacactcgcgccgcaccgg 85 |||||||||||||||||||| Sbjct: 316 ccacactcgcgccgcaccgg 297
>gb|AY523973.1|AY523972S2 Azospirillum brasilense plasmid 90 MDa, partial sequence Length = 67651 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 cgtcctggtgaccggcggcg 184 |||||||||||||||||||| Sbjct: 44989 cgtcctggtgaccggcggcg 45008
>ref|XM_569392.1| Cryptococcus neoformans var. neoformans JEC21 CTP synthase (CNC00220) partial mRNA Length = 2181 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 465 gggagaatacctgggaaagactgtgcaggttgtccc 500 |||||| ||||||||||| ||||| ||| ||||||| Sbjct: 475 gggagattacctgggaaaaactgttcagattgtccc 510
>gb|AC126024.3| Mus musculus BAC clone RP24-423I20 from chromosome 1, complete sequence Length = 177041 Score = 40.1 bits (20), Expect = 7.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 307 tctccttttgaacatggcgaagtgtttgttctagatgatggtgg 350 ||||||| || |||||| ||||| ||||| || ||||||||||| Sbjct: 35555 tctccttatggacatggagaagtctttgtgctggatgatggtgg 35512
>gb|AC124359.3| Mus musculus BAC clone RP24-495G2 from chromosome 1, complete sequence Length = 174750 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 448 attaataaagaaagagagggagaa 471 ||||||||||| |||||||||||| Sbjct: 112444 attaataaagagagagagggagaa 112467
>gb|AY351266.1| Chlamydomonas reinhardtii putative NADH:ubiquinone oxidoreductase subunit 3 precursor, gene, complete cds; nuclear gene for mitochondrial product Length = 3158 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 tggtgagcgggctcgggaaggggg 208 ||||||||||||| |||||||||| Sbjct: 1393 tggtgagcgggctggggaaggggg 1416
>gb|BC114111.1| Bos taurus similar to fem-1 homolog a (C.elegans), transcript variant 1, mRNA (cDNA clone MGC:137753 IMAGE:8176420), complete cds Length = 3597 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ccacactcgcgccgcaccgg 85 |||||||||||||||||||| Sbjct: 333 ccacactcgcgccgcaccgg 314
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ctcgcgccgcaccggacgaa 90 |||||||||||||||||||| Sbjct: 4030087 ctcgcgccgcaccggacgaa 4030106
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 cgtcctggtgaccggcggcg 184 |||||||||||||||||||| Sbjct: 121400 cgtcctggtgaccggcggcg 121419
>emb|BX088648.9| Mouse DNA sequence from clone RP23-156M16 on chromosome 11, complete sequence Length = 199838 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 taataaagaaagagagggag 469 |||||||||||||||||||| Sbjct: 184820 taataaagaaagagagggag 184801
>gb|BC009408.1| Homo sapiens CTP synthase, mRNA (cDNA clone MGC:10396 IMAGE:3355881), complete cds Length = 2860 Score = 40.1 bits (20), Expect = 7.4 Identities = 74/92 (80%) Strand = Plus / Plus Query: 424 actggaaagatctaccagtctgttattaataaagaaagagagggagaatacctgggaaag 483 ||||||||||| ||||||| ||| ||||| || ||| | | ||||| ||| |||| || Sbjct: 419 actggaaagatataccagtatgtcattaacaaggaacggaaaggagattacttggggaaa 478 Query: 484 actgtgcaggttgtcccgcacatcacaaatgc 515 ||||| || |||||||| || |||||| |||| Sbjct: 479 actgtccaagttgtccctcatatcacagatgc 510
>emb|CR602579.1| full-length cDNA clone CS0DJ010YB12 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1902 Score = 40.1 bits (20), Expect = 7.4 Identities = 74/92 (80%) Strand = Plus / Plus Query: 424 actggaaagatctaccagtctgttattaataaagaaagagagggagaatacctgggaaag 483 ||||||||||| ||||||| ||| ||||| || ||| | | ||||| ||| |||| || Sbjct: 401 actggaaagatataccagtatgtcattaacaaggaacggaaaggagattacttggggaaa 460 Query: 484 actgtgcaggttgtcccgcacatcacaaatgc 515 ||||| || |||||||| || |||||| |||| Sbjct: 461 actgtccaagttgtccctcatatcacagatgc 492
>gb|AE011629.1| Xanthomonas axonopodis pv. citri str. 306, section 7 of 469 of the complete genome Length = 14030 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 accggcggcgtggtgagcgg 194 |||||||||||||||||||| Sbjct: 13545 accggcggcgtggtgagcgg 13564
>gb|AC104237.2| Homo sapiens chromosome 11, clone RP11-35J10, complete sequence Length = 164732 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 taataaagaaagagagggag 469 |||||||||||||||||||| Sbjct: 144140 taataaagaaagagagggag 144121
>gb|AC093240.2| Homo sapiens chromosome 5 clone RP11-103P4, complete sequence Length = 163673 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 gaaagatctaccagtctgtt 447 |||||||||||||||||||| Sbjct: 29660 gaaagatctaccagtctgtt 29641
>gb|AC034242.6| Homo sapiens chromosome 5 clone CTD-2514M18, complete sequence Length = 221452 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 ggagaatacctgggaaagac 485 |||||||||||||||||||| Sbjct: 10787 ggagaatacctgggaaagac 10768
>gb|AC153647.4| Mus musculus BAC clone RP24-396E16 from chromosome 1, complete sequence Length = 177775 Score = 40.1 bits (20), Expect = 7.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 307 tctccttttgaacatggcgaagtgtttgttctagatgatggtgg 350 ||||||| || |||||| ||||| ||||| || ||||||||||| Sbjct: 89384 tctccttatggacatggagaagtctttgtgctggatgatggtgg 89341
>gb|AF350373.1|AF350373 Rattus norvegicus serologically defined breast cancer antigen NY-BR-16-like protein mRNA, partial cds Length = 368 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cgcggcggcggaggtcggaggcgg 115 |||||||||||||||||| ||||| Sbjct: 188 cgcggcggcggaggtcggcggcgg 211
>gb|AC016637.7| Homo sapiens chromosome 5 clone RP11-34J15, complete sequence Length = 173317 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 ggagaatacctgggaaagac 485 |||||||||||||||||||| Sbjct: 61 ggagaatacctgggaaagac 80
>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1656_A11 Length = 148887 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ggcggaggtcggaggcggcgtgcg 121 |||||||| ||||||||||||||| Sbjct: 38148 ggcggagggcggaggcggcgtgcg 38125
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 40.1 bits (20), Expect = 7.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 91 tcgcggcggcggaggtcggaggcggcgtgcgg 122 ||||||||||||||| ||||||||||| |||| Sbjct: 22649 tcgcggcggcggagg-cggaggcggcgagcgg 22679
>gb|AC093528.3| Homo sapiens chromosome 5 clone RP11-297K24, complete sequence Length = 198167 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 gaaagatctaccagtctgtt 447 |||||||||||||||||||| Sbjct: 196866 gaaagatctaccagtctgtt 196847
>ref|XM_214012.3| PREDICTED: Rattus norvegicus similar to ankyrin repeat domain protein 17 isoform b (LOC289521), mRNA Length = 9269 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cgcggcggcggaggtcggaggcgg 115 |||||||||||||||||| ||||| Sbjct: 213 cgcggcggcggaggtcggcggcgg 236
>dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415A04 Length = 160669 Score = 40.1 bits (20), Expect = 7.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 91 tcgcggcggcggaggtcggaggcggcgtgcgg 122 ||||||||||||||| ||||||||||| |||| Sbjct: 153618 tcgcggcggcggagg-cggaggcggcgagcgg 153648
>emb|BX682536.4| Mouse DNA sequence from clone RP23-190M5 on chromosome 4, complete sequence Length = 34150 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 cacgaggctcccctccctcc 26 |||||||||||||||||||| Sbjct: 14395 cacgaggctcccctccctcc 14376
>dbj|AB072275.1| Ipomoea nil transposon Tpn105 DNA, complete sequence Length = 6500 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 cggcggcggaggtcggaggcggcg 117 ||||||||||||| |||||||||| Sbjct: 2807 cggcggcggaggttggaggcggcg 2784
>emb|AL671906.15| Mouse DNA sequence from clone RP23-300B11 on chromosome X, complete sequence Length = 216692 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 ggtttctagaaattaagctg 402 |||||||||||||||||||| Sbjct: 63748 ggtttctagaaattaagctg 63767
>emb|BX511169.2|RN224C24 Rattus norvegicus chromosome 1 BAC RP32-224C24, complete sequence Length = 163386 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 accctcccacccccacacca 68 |||||||||||||||||||| Sbjct: 67762 accctcccacccccacacca 67781
>dbj|AK130549.1| Homo sapiens cDNA FLJ27039 fis, clone SLV08494, highly similar to CTP synthase (EC 6.3.4.2) Length = 2037 Score = 40.1 bits (20), Expect = 7.4 Identities = 74/92 (80%) Strand = Plus / Plus Query: 424 actggaaagatctaccagtctgttattaataaagaaagagagggagaatacctgggaaag 483 ||||||||||| ||||||| ||| ||||| || ||| | | ||||| ||| |||| || Sbjct: 398 actggaaagatataccagtatgtcattaacaaggaacggaaaggagattacttggggaaa 457 Query: 484 actgtgcaggttgtcccgcacatcacaaatgc 515 ||||| || |||||||| || |||||| |||| Sbjct: 458 actgtccaagttgtccctcatatcacagatgc 489
>ref|NM_001905.1| Homo sapiens CTP synthase (CTPS), mRNA Length = 2758 Score = 40.1 bits (20), Expect = 7.4 Identities = 74/92 (80%) Strand = Plus / Plus Query: 424 actggaaagatctaccagtctgttattaataaagaaagagagggagaatacctgggaaag 483 ||||||||||| ||||||| ||| ||||| || ||| | | ||||| ||| |||| || Sbjct: 343 actggaaagatataccagtatgtcattaacaaggaacggaaaggagattacttggggaaa 402 Query: 484 actgtgcaggttgtcccgcacatcacaaatgc 515 ||||| || |||||||| || |||||| |||| Sbjct: 403 actgtccaagttgtccctcatatcacagatgc 434
>gb|AC159264.3| Mus musculus BAC clone RP24-67G10 from chromosome 13, complete sequence Length = 164748 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 448 attaataaagaaagagagggagaa 471 ||||||||| |||||||||||||| Sbjct: 142466 attaataaaaaaagagagggagaa 142489
>emb|AL627385.13| Mouse DNA sequence from clone RP23-229I19 on chromosome X, complete sequence Length = 209817 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 315 tgaacatggcgaagtgtttgttctagatgatggtgg 350 ||||||||| ||||| ||||| || ||||||||||| Sbjct: 43591 tgaacatggagaagtctttgtgctggatgatggtgg 43556
>emb|AL807822.7| Mouse DNA sequence from clone RP23-31A20 on chromosome X, complete sequence Length = 116719 Score = 40.1 bits (20), Expect = 7.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 325 gaagtgtttgttctagatgatggtggcgaggtggacttggatctcggaaactatga 380 ||||| |||||| || |||||||||| || || || ||||| || ||||||||||| Sbjct: 76828 gaagtatttgttttaaatgatggtggagaagttgatttggaccttggaaactatga 76883
>emb|X52142.1|HSCTPSYN Human mRNA for CTP synthetase (EC 6.3.4.2) Length = 2758 Score = 40.1 bits (20), Expect = 7.4 Identities = 74/92 (80%) Strand = Plus / Plus Query: 424 actggaaagatctaccagtctgttattaataaagaaagagagggagaatacctgggaaag 483 ||||||||||| ||||||| ||| ||||| || ||| | | ||||| ||| |||| || Sbjct: 343 actggaaagatataccagtatgtcattaacaaggaacggaaaggagattacttggggaaa 402 Query: 484 actgtgcaggttgtcccgcacatcacaaatgc 515 ||||| || |||||||| || |||||| |||| Sbjct: 403 actgtccaagttgtccctcatatcacagatgc 434
>gb|J02818.1|RABCYPP2 Rabbit cytochrome P-450p-2 mRNA, 3' end Length = 2929 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ccgatgctggaaccatgtct 309 |||||||||||||||||||| Sbjct: 369 ccgatgctggaaccatgtct 350 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,225,596 Number of Sequences: 3902068 Number of extensions: 5225596 Number of successful extensions: 132318 Number of sequences better than 10.0: 157 Number of HSP's better than 10.0 without gapping: 154 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 131006 Number of HSP's gapped (non-prelim): 1322 length of query: 545 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 522 effective length of database: 17,143,297,704 effective search space: 8948801401488 effective search space used: 8948801401488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)