ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd1e17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB040769.1| Hordeum vulgare mRNA for endo-1,4-beta-glucanase Cel1, complete cds Length = 2442 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 2 tcttcctaagcccagggtatccttatgaagaaatattaaggacattccacaaccaaactg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1358 tcttcctaagcccagggtatccttatgaagaaatattaaggacattccacaaccaaactg 1417 Query: 62 acaatgtcatgtgctcatatttaccagtattcaattcattcaacttcactaaaggaggac 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1418 acaatgtcatgtgctcatatttaccagtattcaattcattcaacttcactaaaggaggac 1477 Query: 122 tgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattcc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1478 tgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattcc 1537 Query: 182 ttgcctctctgtatgctgattatctggacactgcagatacaccagggtggtattgtggac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1538 ttgcctctctgtatgctgattatctggacactgcagatacaccagggtggtattgtggac 1597 Query: 242 ctaatttctataccacagatgtcctccgcaagtttgcaaagtcacagcttgattacattc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1598 ctaatttctataccacagatgtcctccgcaagtttgcaaagtcacagcttgattacattc 1657 Query: 302 taggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaagc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1658 taggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaagc 1717 Query: 362 gtgttcatcacagaggggcatcaatccctcataacggtgtcaaatatggatgcaaaggag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1718 gtgttcatcacagaggggcatcaatccctcataacggtgtcaaatatggatgcaaaggag 1777 Query: 422 gttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggagcaatggttg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1778 gttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggagcaatggttg 1837 Query: 482 ctgggcctgacaagcatgatggcttc 507 |||||||||||||||||||||||||| Sbjct: 1838 ctgggcctgacaagcatgatggcttc 1863
>gb|AY091512.1| Triticum aestivum endo-1,4-beta-glucanase mRNA, complete cds Length = 2196 Score = 892 bits (450), Expect = 0.0 Identities = 492/506 (97%) Strand = Plus / Plus Query: 2 tcttcctaagcccagggtatccttatgaagaaatattaaggacattccacaaccaaactg 61 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1172 tcttcctaagtccagggtatccttatgaagaaatattaaggacattccacaaccaaactg 1231 Query: 62 acaatgtcatgtgctcatatttaccagtattcaattcattcaacttcactaaaggaggac 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1232 acaatgtcatgtgctcatatttaccagtattcaattcattcaacttcactaaaggaggat 1291 Query: 122 tgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattcc 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1292 tgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgcagctttcc 1351 Query: 182 ttgcctctctgtatgctgattatctggacactgcagatacaccagggtggtattgtggac 241 |||||||| |||||||||||||||||||||| |||||||||||| ||||||||||| ||| Sbjct: 1352 ttgcctctttgtatgctgattatctggacaccgcagatacaccaaggtggtattgtagac 1411 Query: 242 ctaatttctataccacagatgtcctccgcaagtttgcaaagtcacagcttgattacattc 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 1412 ctaatttctataccacagatgtcctccgtaagtttgcaaagtcacagcttgattacatcc 1471 Query: 302 taggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaagc 361 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1472 taggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtacccgaagc 1531 Query: 362 gtgttcatcacagaggggcatcaatccctcataacggtgtcaaatatggatgcaaaggag 421 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 1532 gtgttcatcacagaggggcatcaatccctcataacggtgtcaagtacggatgcaaaggag 1591 Query: 422 gttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggagcaatggttg 481 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1592 gttttaaatggagagagtttaagaaagcaaaccctaatatcctcgtcggagcaatggttg 1651 Query: 482 ctgggcctgacaagcatgatggcttc 507 |||| ||||||||||||||||||||| Sbjct: 1652 ctggccctgacaagcatgatggcttc 1677
>ref|XM_469632.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2313 Score = 452 bits (228), Expect = e-124 Identities = 435/504 (86%) Strand = Plus / Plus Query: 4 ttcctaagcccagggtatccttatgaagaaatattaaggacattccacaaccaaactgac 63 |||||||| || || |||||||| ||||||||| | || ||||| ||||||||||| ||| Sbjct: 1281 ttcctaagtcctggatatccttacgaagaaatactgagaacatttcacaaccaaacagac 1340 Query: 64 aatgtcatgtgctcatatttaccagtattcaattcattcaacttcactaaaggaggactg 123 ||||| |||||||| ||| | || | | ||||||||||||||| || ||||||||| || Sbjct: 1341 aatgttatgtgctcgtatctgccgatgtacaattcattcaactttaccaaaggaggaatg 1400 Query: 124 atacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattcctt 183 ||||| |||||||| ||| ||||||| ||||||||||| || |||||||| || |||||| Sbjct: 1401 atacagctcaaccacggaaggcctcagccacttcagtatgttgtcaatgcggctttcctt 1460 Query: 184 gcctctctgtatgctgattatctggacactgcagatacaccagggtggtattgtggacct 243 |||||||| || ||||| ||||| ||||||||||||| |||||||||||||||||| Sbjct: 1461 gcctctctatacagcgattacctggatgctgcagatacacctgggtggtattgtggacct 1520 Query: 244 aatttctataccacagatgtcctccgcaagtttgcaaagtcacagcttgattacattcta 303 | |||||| || ||||| ||||||||||| ||||||| ||||||||| ||||| | ||| Sbjct: 1521 actttctacactacagaagtcctccgcaaatttgcaaggtcacagctcgattatgtccta 1580 Query: 304 ggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaagcgt 363 || |||||||||| |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 1581 ggtaagaacccactgaagatgagctacgttgtgggttttggaaacaagtaccccaagcgc 1640 Query: 364 gttcatcacagaggggcatcaatccctcataacggtgtcaaatatggatgcaaaggaggt 423 | |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1641 gctcatcacagaggtgcatcaatccctcataatggtgtcaaatatggatgcaaaggaggc 1700 Query: 424 tttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggagcaatggttgct 483 ||||||||||| ||| ||||||| |||| ||||||||||| | |||||| |||||||| Sbjct: 1701 tttaaatggagggagactaagaagccaaatcctaatatccttattggagcactggttgct 1760 Query: 484 gggcctgacaagcatgatggcttc 507 || ||||| | ||||||||||||| Sbjct: 1761 ggccctgataggcatgatggcttc 1784
>dbj|AK104929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D09, full insert sequence Length = 1963 Score = 452 bits (228), Expect = e-124 Identities = 435/504 (86%) Strand = Plus / Plus Query: 4 ttcctaagcccagggtatccttatgaagaaatattaaggacattccacaaccaaactgac 63 |||||||| || || |||||||| ||||||||| | || ||||| ||||||||||| ||| Sbjct: 957 ttcctaagtcctggatatccttacgaagaaatactgagaacatttcacaaccaaacagac 1016 Query: 64 aatgtcatgtgctcatatttaccagtattcaattcattcaacttcactaaaggaggactg 123 ||||| |||||||| ||| | || | | ||||||||||||||| || ||||||||| || Sbjct: 1017 aatgttatgtgctcgtatctgccgatgtacaattcattcaactttaccaaaggaggaatg 1076 Query: 124 atacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattcctt 183 ||||| |||||||| ||| ||||||| ||||||||||| || |||||||| || |||||| Sbjct: 1077 atacagctcaaccacggaaggcctcagccacttcagtatgttgtcaatgcggctttcctt 1136 Query: 184 gcctctctgtatgctgattatctggacactgcagatacaccagggtggtattgtggacct 243 |||||||| || ||||| ||||| ||||||||||||| |||||||||||||||||| Sbjct: 1137 gcctctctatacagcgattacctggatgctgcagatacacctgggtggtattgtggacct 1196 Query: 244 aatttctataccacagatgtcctccgcaagtttgcaaagtcacagcttgattacattcta 303 | |||||| || ||||| ||||||||||| ||||||| ||||||||| ||||| | ||| Sbjct: 1197 actttctacactacagaagtcctccgcaaatttgcaaggtcacagctcgattatgtccta 1256 Query: 304 ggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaagcgt 363 || |||||||||| |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 1257 ggtaagaacccactgaagatgagctacgttgtgggttttggaaacaagtaccccaagcgc 1316 Query: 364 gttcatcacagaggggcatcaatccctcataacggtgtcaaatatggatgcaaaggaggt 423 | |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1317 gctcatcacagaggtgcatcaatccctcataatggtgtcaaatatggatgcaaaggaggc 1376 Query: 424 tttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggagcaatggttgct 483 ||||||||||| ||| ||||||| |||| ||||||||||| | |||||| |||||||| Sbjct: 1377 tttaaatggagggagactaagaagccaaatcctaatatccttattggagcactggttgct 1436 Query: 484 gggcctgacaagcatgatggcttc 507 || ||||| | ||||||||||||| Sbjct: 1437 ggccctgataggcatgatggcttc 1460
>dbj|AK070408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054M04, full insert sequence Length = 2397 Score = 452 bits (228), Expect = e-124 Identities = 435/504 (86%) Strand = Plus / Plus Query: 4 ttcctaagcccagggtatccttatgaagaaatattaaggacattccacaaccaaactgac 63 |||||||| || || |||||||| ||||||||| | || ||||| ||||||||||| ||| Sbjct: 1382 ttcctaagtcctggatatccttacgaagaaatactgagaacatttcacaaccaaacagac 1441 Query: 64 aatgtcatgtgctcatatttaccagtattcaattcattcaacttcactaaaggaggactg 123 ||||| |||||||| ||| | || | | ||||||||||||||| || ||||||||| || Sbjct: 1442 aatgttatgtgctcgtatctgccgatgtacaattcattcaactttaccaaaggaggaatg 1501 Query: 124 atacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattcctt 183 ||||| |||||||| ||| ||||||| ||||||||||| || |||||||| || |||||| Sbjct: 1502 atacagctcaaccacggaaggcctcagccacttcagtatgttgtcaatgcggctttcctt 1561 Query: 184 gcctctctgtatgctgattatctggacactgcagatacaccagggtggtattgtggacct 243 |||||||| || ||||| ||||| ||||||||||||| |||||||||||||||||| Sbjct: 1562 gcctctctatacagcgattacctggatgctgcagatacacctgggtggtattgtggacct 1621 Query: 244 aatttctataccacagatgtcctccgcaagtttgcaaagtcacagcttgattacattcta 303 | |||||| || ||||| ||||||||||| ||||||| ||||||||| ||||| | ||| Sbjct: 1622 actttctacactacagaagtcctccgcaaatttgcaaggtcacagctcgattatgtccta 1681 Query: 304 ggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaagcgt 363 || |||||||||| |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 1682 ggtaagaacccactgaagatgagctacgttgtgggttttggaaacaagtaccccaagcgc 1741 Query: 364 gttcatcacagaggggcatcaatccctcataacggtgtcaaatatggatgcaaaggaggt 423 | |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1742 gctcatcacagaggtgcatcaatccctcataatggtgtcaaatatggatgcaaaggaggc 1801 Query: 424 tttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggagcaatggttgct 483 ||||||||||| ||| ||||||| |||| ||||||||||| | |||||| |||||||| Sbjct: 1802 tttaaatggagggagactaagaagccaaatcctaatatccttattggagcactggttgct 1861 Query: 484 gggcctgacaagcatgatggcttc 507 || ||||| | ||||||||||||| Sbjct: 1862 ggccctgataggcatgatggcttc 1885
>gb|BT023982.1| Zea mays clone EL01N0414A03 mRNA sequence Length = 1870 Score = 381 bits (192), Expect = e-102 Identities = 411/484 (84%) Strand = Plus / Plus Query: 2 tcttcctaagcccagggtatccttatgaagaaatattaaggacattccacaaccaaactg 61 |||||||||| |||||||| ||||| ||||||||| | ||||||||||||||||| || | Sbjct: 863 tcttcctaagtccagggtacccttacgaagaaatactgaggacattccacaaccagaccg 922 Query: 62 acaatgtcatgtgctcatatttaccagtattcaattcattcaacttcactaaaggaggac 121 ||||||| |||||||||||| | || ||||||||||||||||||||||||||||||||| Sbjct: 923 acaatgttatgtgctcatatctgcctctattcaattcattcaacttcactaaaggaggac 982 Query: 122 tgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattcc 181 | |||||||||||||||||| ||||||| ||||||||||| | ||||| ||||| |||| Sbjct: 983 taatacaactcaaccatggaaggcctcagccacttcagtatgctgtcaacgcagctttcc 1042 Query: 182 ttgcctctctgtatgctgattatctggacactgcagatacaccagggtggtattgtggac 241 |||| ||||| || || ||||| || ||||||| || || |||||||| || |||| Sbjct: 1043 ttgcttctctatacagcgactatcttgaagctgcagacacgcctgggtggtactgcggac 1102 Query: 242 ctaatttctataccacagatgtcctccgcaagtttgcaaagtcacagcttgattacattc 301 |||| ||||| |||||||| ||||||||||||||||| | ||||||||| || ||||| | Sbjct: 1103 ctaacttctacaccacagaagtcctccgcaagtttgccaggtcacagctcgactacatcc 1162 Query: 302 taggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaagc 361 | |||||||||||| |||||||||||||| |||||||| ||||| |||||||| |||| Sbjct: 1163 ttggcaagaacccattgaagatgagctacgttgtgggtttcggaaacaagtacccgaagc 1222 Query: 362 gtgttcatcacagaggggcatcaatccctcataacggtgtcaaatatggatgcaaaggag 421 | |||||||||||| || || || ||||| ||||| ||||| ||||| |||||||||| Sbjct: 1223 gccctcatcacagaggcgcgtcgatacctcacaacggcgtcaagtatgggtgcaaaggag 1282 Query: 422 gttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggagcaatggttg 481 ||| || ||||| || | ||||| ||||||||||| ||||| |||||||||||||| | Sbjct: 1283 gttacaagtggagggacacaaagaaggcaaaccctaacatccttgtcggagcaatggtgg 1342 Query: 482 ctgg 485 |||| Sbjct: 1343 ctgg 1346
>gb|AY104195.1| Zea mays PCO094435 mRNA sequence Length = 2019 Score = 373 bits (188), Expect = e-100 Identities = 410/484 (84%) Strand = Plus / Plus Query: 2 tcttcctaagcccagggtatccttatgaagaaatattaaggacattccacaaccaaactg 61 |||||||||| |||||||| ||||| ||||||||| | |||||||||||||||||||| | Sbjct: 929 tcttcctaagtccagggtacccttacgaagaaatactgaggacattccacaaccaaaccg 988 Query: 62 acaatgtcatgtgctcatatttaccagtattcaattcattcaacttcactaaaggaggac 121 ||||||| |||||||||||| | || |||||||||||||||||||||||||||||||| Sbjct: 989 acaatgttatgtgctcatatctgcctctattcaattcattcaacttcactaaaggaggat 1048 Query: 122 tgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattcc 181 | |||||||||||||||||| ||||||| ||||||||||| | ||||| ||||| |||| Sbjct: 1049 taatacaactcaaccatggaaggcctcagccacttcagtatgctgtcaacgcagctttcc 1108 Query: 182 ttgcctctctgtatgctgattatctggacactgcagatacaccagggtggtattgtggac 241 |||| ||||| || || ||||| || ||||||| || || |||||||| || |||| Sbjct: 1109 ttgcttctctatacagcgactatcttgaagctgcagacacgcctgggtggtactgcggac 1168 Query: 242 ctaatttctataccacagatgtcctccgcaagtttgcaaagtcacagcttgattacattc 301 |||| ||||| |||||||| ||||||||||||||||| | ||||||||| || ||||| | Sbjct: 1169 ctaacttctacaccacagaagtcctccgcaagtttgccaggtcacagctcgactacatcc 1228 Query: 302 taggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaagc 361 | || ||||||||| |||||||||||||| |||||||| ||||| |||||||| |||| Sbjct: 1229 ttggaaagaacccattgaagatgagctacgttgtgggtttcggaaacaagtacccgaagc 1288 Query: 362 gtgttcatcacagaggggcatcaatccctcataacggtgtcaaatatggatgcaaaggag 421 | |||||||||||| || || || ||||| ||||| ||||| ||||| |||||||||| Sbjct: 1289 gccctcatcacagaggcgcgtcgatacctcacaacggcgtcaagtatgggtgcaaaggag 1348 Query: 422 gttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggagcaatggttg 481 ||| || ||||| || | ||||| ||||||||||| ||||| |||||||||||||| | Sbjct: 1349 gttacaagtggagggacacaaagaaggcaaaccctaacatccttgtcggagcaatggtgg 1408 Query: 482 ctgg 485 |||| Sbjct: 1409 ctgg 1412
>gb|BT017857.1| Zea mays clone EL01N0511D04.c mRNA sequence Length = 894 Score = 301 bits (152), Expect = 1e-78 Identities = 356/424 (83%) Strand = Plus / Plus Query: 62 acaatgtcatgtgctcatatttaccagtattcaattcattcaacttcactaaaggaggac 121 ||||||| |||||||||||| | || ||||||| | ||||||||||||||||||||||| Sbjct: 12 acaatgttatgtgctcatatctgcctctattcaacttattcaacttcactaaaggaggac 71 Query: 122 tgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattcc 181 | |||||||||||||||||| ||||||| ||||||||||| | ||||| ||||| |||| Sbjct: 72 taatacaactcaaccatggaaggcctcagccacttcagtatgctgtcaacgcagctttcc 131 Query: 182 ttgcctctctgtatgctgattatctggacactgcagatacaccagggtggtattgtggac 241 |||| ||||| || || ||||| || ||||||| || || |||||||| || |||| Sbjct: 132 ttgcttctctatacagcgactatcttgaagctgcagacacgcctgggtggtactgcggac 191 Query: 242 ctaatttctataccacagatgtcctccgcaagtttgcaaagtcacagcttgattacattc 301 |||| ||||| |||||||| ||||||||||||||||| | ||||||||| || ||||| | Sbjct: 192 ctaacttctacaccacagaagtcctccgcaagtttgccaggtcacagctcgactacatcc 251 Query: 302 taggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaagc 361 | |||||||||||| |||||||||||||| |||||||| ||||| |||||||| |||| Sbjct: 252 ttggcaagaacccattgaagatgagctacgttgtgggtttcggaaacaagtacccgaagc 311 Query: 362 gtgttcatcacagaggggcatcaatccctcataacggtgtcaaatatggatgcaaaggag 421 | |||||||||||| || || || ||||| ||||| ||||| ||||| |||||||||| Sbjct: 312 gccctcatcacagaggcgcgtcgatacctcacaacggcgtcaagtatgggtgcaaaggag 371 Query: 422 gttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggagcaatggttg 481 ||| || ||||| || | ||||| ||||||||||| ||||| |||||||||||||| | Sbjct: 372 gttacaagtggagggacacaaagaaggcaaaccctaacatccttgtcggagcaatggtgg 431 Query: 482 ctgg 485 |||| Sbjct: 432 ctgg 435
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 236 bits (119), Expect = 6e-59 Identities = 185/207 (89%) Strand = Plus / Minus Query: 301 ctaggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaag 360 ||||| |||||||||| |||||||||||||| |||||||||||||| |||||||||||| Sbjct: 29890112 ctaggtaagaacccactgaagatgagctacgttgtgggttttggaaacaagtaccccaag 29890053 Query: 361 cgtgttcatcacagaggggcatcaatccctcataacggtgtcaaatatggatgcaaagga 420 || | |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 29890052 cgcgctcatcacagaggtgcatcaatccctcataatggtgtcaaatatggatgcaaagga 29889993 Query: 421 ggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggagcaatggtt 480 || ||||||||||| ||| ||||||| |||| ||||||||||| | |||||| ||||| Sbjct: 29889992 ggctttaaatggagggagactaagaagccaaatcctaatatccttattggagcactggtt 29889933 Query: 481 gctgggcctgacaagcatgatggcttc 507 ||||| ||||| | ||||||||||||| Sbjct: 29889932 gctggccctgataggcatgatggcttc 29889906 Score = 157 bits (79), Expect = 4e-35 Identities = 151/175 (86%) Strand = Plus / Minus Query: 114 aggaggactgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgc 173 ||||||| ||||||| |||||||| ||| ||||||| ||||||||||| || |||||||| Sbjct: 29890389 aggaggaatgatacagctcaaccacggaaggcctcagccacttcagtatgttgtcaatgc 29890330 Query: 174 agcattccttgcctctctgtatgctgattatctggacactgcagatacaccagggtggta 233 || |||||||||||||| || ||||| ||||| ||||||||||||| |||||||| Sbjct: 29890329 ggctttccttgcctctctatacagcgattacctggatgctgcagatacacctgggtggta 29890270 Query: 234 ttgtggacctaatttctataccacagatgtcctccgcaagtttgcaaagtcacag 288 ||||||||||| |||||| || ||||| ||||||||||| ||||||| ||||||| Sbjct: 29890269 ttgtggacctactttctacactacagaagtcctccgcaaatttgcaaggtcacag 29890215 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 4 ttcctaagcccagggtatccttatgaagaaatattaaggacattccacaaccaaactgac 63 |||||||| || || |||||||| ||||||||| | || ||||| ||||||||||| ||| Sbjct: 29890576 ttcctaagtcctggatatccttacgaagaaatactgagaacatttcacaaccaaacagac 29890517 Query: 64 aatgtcatgtgctcatatttaccagtattcaattcattcaacttcactaaagg 116 ||||| |||||||| ||| | || | | ||||||||||||||| || ||||| Sbjct: 29890516 aatgttatgtgctcgtatctgccgatgtacaattcattcaactttaccaaagg 29890464 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 412 tgcaaaggaggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcgga 471 ||||||||||||| || |||||||| | |||||| |||||||||| ||| |||||||| Sbjct: 12077729 tgcaaaggaggttggaagtggagagaaaccaagaaaccaaaccctaacatcatcgtcgga 12077670 Query: 472 gcaatggttgctgggcctga 491 || ||||| ||||| ||||| Sbjct: 12077669 gcgatggtagctggccctga 12077650 Score = 50.1 bits (25), Expect = 0.007 Identities = 79/97 (81%) Strand = Plus / Minus Query: 143 ggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctgtatgctgatt 202 |||| ||||| |||||||| || || || || ||||||||||| ||| |||| | ||| | Sbjct: 12078081 ggccacaacctcttcagtatgtggtgaacgctgcattccttgcttctttgtacggtgact 12078022 Query: 203 atctggacactgcagatacaccagggtggtattgtgg 239 |||| || |||||||||| || || ||||||||||| Sbjct: 12078021 atcttgaggctgcagatacccctggctggtattgtgg 12077985
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 236 bits (119), Expect = 6e-59 Identities = 185/207 (89%) Strand = Plus / Plus Query: 301 ctaggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaag 360 ||||| |||||||||| |||||||||||||| |||||||||||||| |||||||||||| Sbjct: 120494 ctaggtaagaacccactgaagatgagctacgttgtgggttttggaaacaagtaccccaag 120553 Query: 361 cgtgttcatcacagaggggcatcaatccctcataacggtgtcaaatatggatgcaaagga 420 || | |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 120554 cgcgctcatcacagaggtgcatcaatccctcataatggtgtcaaatatggatgcaaagga 120613 Query: 421 ggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggagcaatggtt 480 || ||||||||||| ||| ||||||| |||| ||||||||||| | |||||| ||||| Sbjct: 120614 ggctttaaatggagggagactaagaagccaaatcctaatatccttattggagcactggtt 120673 Query: 481 gctgggcctgacaagcatgatggcttc 507 ||||| ||||| | ||||||||||||| Sbjct: 120674 gctggccctgataggcatgatggcttc 120700 Score = 157 bits (79), Expect = 4e-35 Identities = 151/175 (86%) Strand = Plus / Plus Query: 114 aggaggactgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgc 173 ||||||| ||||||| |||||||| ||| ||||||| ||||||||||| || |||||||| Sbjct: 120217 aggaggaatgatacagctcaaccacggaaggcctcagccacttcagtatgttgtcaatgc 120276 Query: 174 agcattccttgcctctctgtatgctgattatctggacactgcagatacaccagggtggta 233 || |||||||||||||| || ||||| ||||| ||||||||||||| |||||||| Sbjct: 120277 ggctttccttgcctctctatacagcgattacctggatgctgcagatacacctgggtggta 120336 Query: 234 ttgtggacctaatttctataccacagatgtcctccgcaagtttgcaaagtcacag 288 ||||||||||| |||||| || ||||| ||||||||||| ||||||| ||||||| Sbjct: 120337 ttgtggacctactttctacactacagaagtcctccgcaaatttgcaaggtcacag 120391 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 4 ttcctaagcccagggtatccttatgaagaaatattaaggacattccacaaccaaactgac 63 |||||||| || || |||||||| ||||||||| | || ||||| ||||||||||| ||| Sbjct: 120030 ttcctaagtcctggatatccttacgaagaaatactgagaacatttcacaaccaaacagac 120089 Query: 64 aatgtcatgtgctcatatttaccagtattcaattcattcaacttcactaaagg 116 ||||| |||||||| ||| | || | | ||||||||||||||| || ||||| Sbjct: 120090 aatgttatgtgctcgtatctgccgatgtacaattcattcaactttaccaaagg 120142
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete sequence Length = 139946 Score = 236 bits (119), Expect = 6e-59 Identities = 185/207 (89%) Strand = Plus / Minus Query: 301 ctaggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaag 360 ||||| |||||||||| |||||||||||||| |||||||||||||| |||||||||||| Sbjct: 56053 ctaggtaagaacccactgaagatgagctacgttgtgggttttggaaacaagtaccccaag 55994 Query: 361 cgtgttcatcacagaggggcatcaatccctcataacggtgtcaaatatggatgcaaagga 420 || | |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 55993 cgcgctcatcacagaggtgcatcaatccctcataatggtgtcaaatatggatgcaaagga 55934 Query: 421 ggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggagcaatggtt 480 || ||||||||||| ||| ||||||| |||| ||||||||||| | |||||| ||||| Sbjct: 55933 ggctttaaatggagggagactaagaagccaaatcctaatatccttattggagcactggtt 55874 Query: 481 gctgggcctgacaagcatgatggcttc 507 ||||| ||||| | ||||||||||||| Sbjct: 55873 gctggccctgataggcatgatggcttc 55847 Score = 157 bits (79), Expect = 4e-35 Identities = 151/175 (86%) Strand = Plus / Minus Query: 114 aggaggactgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgc 173 ||||||| ||||||| |||||||| ||| ||||||| ||||||||||| || |||||||| Sbjct: 56330 aggaggaatgatacagctcaaccacggaaggcctcagccacttcagtatgttgtcaatgc 56271 Query: 174 agcattccttgcctctctgtatgctgattatctggacactgcagatacaccagggtggta 233 || |||||||||||||| || ||||| ||||| ||||||||||||| |||||||| Sbjct: 56270 ggctttccttgcctctctatacagcgattacctggatgctgcagatacacctgggtggta 56211 Query: 234 ttgtggacctaatttctataccacagatgtcctccgcaagtttgcaaagtcacag 288 ||||||||||| |||||| || ||||| ||||||||||| ||||||| ||||||| Sbjct: 56210 ttgtggacctactttctacactacagaagtcctccgcaaatttgcaaggtcacag 56156 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 4 ttcctaagcccagggtatccttatgaagaaatattaaggacattccacaaccaaactgac 63 |||||||| || || |||||||| ||||||||| | || ||||| ||||||||||| ||| Sbjct: 56517 ttcctaagtcctggatatccttacgaagaaatactgagaacatttcacaaccaaacagac 56458 Query: 64 aatgtcatgtgctcatatttaccagtattcaattcattcaacttcactaaagg 116 ||||| |||||||| ||| | || | | ||||||||||||||| || ||||| Sbjct: 56457 aatgttatgtgctcgtatctgccgatgtacaattcattcaactttaccaaagg 56405
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 236 bits (119), Expect = 6e-59 Identities = 185/207 (89%) Strand = Plus / Minus Query: 301 ctaggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaag 360 ||||| |||||||||| |||||||||||||| |||||||||||||| |||||||||||| Sbjct: 29981534 ctaggtaagaacccactgaagatgagctacgttgtgggttttggaaacaagtaccccaag 29981475 Query: 361 cgtgttcatcacagaggggcatcaatccctcataacggtgtcaaatatggatgcaaagga 420 || | |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 29981474 cgcgctcatcacagaggtgcatcaatccctcataatggtgtcaaatatggatgcaaagga 29981415 Query: 421 ggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggagcaatggtt 480 || ||||||||||| ||| ||||||| |||| ||||||||||| | |||||| ||||| Sbjct: 29981414 ggctttaaatggagggagactaagaagccaaatcctaatatccttattggagcactggtt 29981355 Query: 481 gctgggcctgacaagcatgatggcttc 507 ||||| ||||| | ||||||||||||| Sbjct: 29981354 gctggccctgataggcatgatggcttc 29981328 Score = 157 bits (79), Expect = 4e-35 Identities = 151/175 (86%) Strand = Plus / Minus Query: 114 aggaggactgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgc 173 ||||||| ||||||| |||||||| ||| ||||||| ||||||||||| || |||||||| Sbjct: 29981811 aggaggaatgatacagctcaaccacggaaggcctcagccacttcagtatgttgtcaatgc 29981752 Query: 174 agcattccttgcctctctgtatgctgattatctggacactgcagatacaccagggtggta 233 || |||||||||||||| || ||||| ||||| ||||||||||||| |||||||| Sbjct: 29981751 ggctttccttgcctctctatacagcgattacctggatgctgcagatacacctgggtggta 29981692 Query: 234 ttgtggacctaatttctataccacagatgtcctccgcaagtttgcaaagtcacag 288 ||||||||||| |||||| || ||||| ||||||||||| ||||||| ||||||| Sbjct: 29981691 ttgtggacctactttctacactacagaagtcctccgcaaatttgcaaggtcacag 29981637 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 4 ttcctaagcccagggtatccttatgaagaaatattaaggacattccacaaccaaactgac 63 |||||||| || || |||||||| ||||||||| | || ||||| ||||||||||| ||| Sbjct: 29981998 ttcctaagtcctggatatccttacgaagaaatactgagaacatttcacaaccaaacagac 29981939 Query: 64 aatgtcatgtgctcatatttaccagtattcaattcattcaacttcactaaagg 116 ||||| |||||||| ||| | || | | ||||||||||||||| || ||||| Sbjct: 29981938 aatgttatgtgctcgtatctgccgatgtacaattcattcaactttaccaaagg 29981886 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 412 tgcaaaggaggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcgga 471 ||||||||||||| || |||||||| | |||||| |||||||||| ||| |||||||| Sbjct: 12074492 tgcaaaggaggttggaagtggagagaaaccaagaaaccaaaccctaacatcatcgtcgga 12074433 Query: 472 gcaatggttgctgggcctga 491 || ||||| ||||| ||||| Sbjct: 12074432 gcgatggtagctggccctga 12074413 Score = 50.1 bits (25), Expect = 0.007 Identities = 79/97 (81%) Strand = Plus / Minus Query: 143 ggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctgtatgctgatt 202 |||| ||||| |||||||| || || || || ||||||||||| ||| |||| | ||| | Sbjct: 12074844 ggccacaacctcttcagtatgtggtgaacgctgcattccttgcttctttgtacggtgact 12074785 Query: 203 atctggacactgcagatacaccagggtggtattgtgg 239 |||| || |||||||||| || || ||||||||||| Sbjct: 12074784 atcttgaggctgcagatacccctggctggtattgtgg 12074748
>gb|AY253447.1| Gossypium hirsutum endo-1,4-beta-glucanase mRNA, complete cds Length = 2031 Score = 91.7 bits (46), Expect = 2e-15 Identities = 205/258 (79%) Strand = Plus / Plus Query: 133 aaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctg 192 ||||||||| ||||||| ||||| || ||||| ||||||||||| ||| | ||| | || Sbjct: 1349 aaccatggaaggcctcagccactgcaatacgtagtcaatgcagccttcttagccgcccta 1408 Query: 193 tatgctgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 252 ||| ||||||||| || ||||| |||||||| || ||||||||||| || ||||||||| Sbjct: 1409 tatagtgattatcttgatactgctgatacacctggatggtattgtggtcccaatttctat 1468 Query: 253 accacagatgtcctccgcaagtttgcaaagtcacagcttgattacattctaggcaagaac 312 | || |||||||| || | ||||| || | ||| ||||||| || || ||||| || Sbjct: 1469 tcaactgatgtcctgcgtgaatttgccaaaacccagattgattatatccttggcaaaaat 1528 Query: 313 ccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaagcgtgttcatcac 372 || | ||| |||||||| || ||||| ||||| || | || || |||| |||||| || Sbjct: 1529 cctcgaaaaatgagctatgttgtgggctttggtaaccattatccaaagcatgttcaccat 1588 Query: 373 agaggggcatcaatccct 390 ||||||||||| |||||| Sbjct: 1589 agaggggcatctatccct 1606 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 469 ggagcaatggttgctgggcctgacaagcatgatgg 503 ||||| ||||| ||||| ||||||||||||||||| Sbjct: 1685 ggagccatggtagctggacctgacaagcatgatgg 1719
>gb|AY574906.1| Gossypium hirsutum membrane-anchored endo-1,4-beta-glucanase (CEL) mRNA, complete cds Length = 2293 Score = 83.8 bits (42), Expect = 5e-13 Identities = 204/258 (79%) Strand = Plus / Plus Query: 133 aaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctg 192 ||||||||| ||||||| ||||| || ||||| ||||||||||| ||| | ||| | || Sbjct: 1363 aaccatggaaggcctcagccactgcaatacgtagtcaatgcagccttcttagccgcccta 1422 Query: 193 tatgctgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 252 ||| ||||||||| || |||| |||||||| || ||||||||||| || ||||||||| Sbjct: 1423 tatagtgattatcttgatgctgctgatacacctggatggtattgtggtcccaatttctat 1482 Query: 253 accacagatgtcctccgcaagtttgcaaagtcacagcttgattacattctaggcaagaac 312 | || |||||||| || | ||||| || | ||| ||||||| || || ||||| || Sbjct: 1483 tcaactgatgtcctgcgtgaatttgccaaaacccagattgattatatccttggcaaaaat 1542 Query: 313 ccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaagcgtgttcatcac 372 || | ||| |||||||| || ||||| ||||| || | || || |||| |||||| || Sbjct: 1543 cctcgaaaaatgagctatgttgtgggctttggtaaccattatccaaagcatgttcaccat 1602 Query: 373 agaggggcatcaatccct 390 ||||||||||| |||||| Sbjct: 1603 agaggggcatctatccct 1620
>gb|AF511408.1| Gossypium hirsutum endo-1,4-beta-glucanase mRNA, complete cds Length = 2282 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 133 aaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctg 192 ||||||||| ||||||| ||||| || ||||| ||||||||||| ||| | ||| | || Sbjct: 1382 aaccatggaaggcctcagccactgcaatacgtagtcaatgcagccttcttagccgcccta 1441 Query: 193 tatgctgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 252 ||| ||||||||| || |||| |||||||| || ||||||||||| || ||||||||| Sbjct: 1442 tatagtgattatcttgatgctgctgatacacctggatggtattgtggtcccaatttctat 1501 Query: 253 accacagatgtcct 266 | || |||||||| Sbjct: 1502 tcaactgatgtcct 1515 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 469 ggagcaatggttgctgggcctgacaagcatgatgg 503 ||||| ||||| ||||| ||||||||||||||||| Sbjct: 1718 ggagccatggtagctggacctgacaagcatgatgg 1752
>emb|AJ621355.1| Pisum sativum partial mRNA for endo-1,4-beta-D-glucanase KORRIGAN (kor-1 gene) Length = 688 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 226 gggtggtattgtggacctaatttctataccacagatgtcctccgcaagtttgcaaagtca 285 ||||||||||||||||||||||||||| | || ||| |||||| ||||||| | | || Sbjct: 248 gggtggtattgtggacctaatttctattcaaccgataaactccgcgagtttgccaggaca 307 Query: 286 cagcttgattacattctaggcaagaacccacaaaagatgagctacgtcgtgggttttgga 345 ||| |||||||||| || || ||||| |||| || |||||||| | || ||||||||| Sbjct: 308 cagattgattacatccttgggaagaatccacggaaaatgagctatattgtaggttttgga 367 Query: 346 aa 347 || Sbjct: 368 aa 369 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Plus Query: 16 gggtatccttatgaagaaatattaaggacattccacaa 53 |||||||| ||||||||||| ||||||| |||||||| Sbjct: 38 gggtatccatatgaagaaattctaaggaccttccacaa 75
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20, complete sequence Length = 144969 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 412 tgcaaaggaggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcgga 471 ||||||||||||| || |||||||| | |||||| |||||||||| ||| |||||||| Sbjct: 98309 tgcaaaggaggttggaagtggagagaaaccaagaaaccaaaccctaacatcatcgtcgga 98250 Query: 472 gcaatggttgctgggcctga 491 || ||||| ||||| ||||| Sbjct: 98249 gcgatggtagctggccctga 98230 Score = 50.1 bits (25), Expect = 0.007 Identities = 79/97 (81%) Strand = Plus / Minus Query: 143 ggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctgtatgctgatt 202 |||| ||||| |||||||| || || || || ||||||||||| ||| |||| | ||| | Sbjct: 98661 ggccacaacctcttcagtatgtggtgaacgctgcattccttgcttctttgtacggtgact 98602 Query: 203 atctggacactgcagatacaccagggtggtattgtgg 239 |||| || |||||||||| || || ||||||||||| Sbjct: 98601 atcttgaggctgcagatacccctggctggtattgtgg 98565
>dbj|AK102748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106K04, full insert sequence Length = 2189 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 412 tgcaaaggaggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcgga 471 ||||||||||||| || |||||||| | |||||| |||||||||| ||| |||||||| Sbjct: 1693 tgcaaaggaggttggaagtggagagaaaccaagaaaccaaaccctaacatcatcgtcgga 1752 Query: 472 gcaatggttgctgggcctga 491 || ||||| ||||| ||||| Sbjct: 1753 gcgatggtagctggccctga 1772 Score = 50.1 bits (25), Expect = 0.007 Identities = 79/97 (81%) Strand = Plus / Plus Query: 143 ggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctgtatgctgatt 202 |||| ||||| |||||||| || || || || ||||||||||| ||| |||| | ||| | Sbjct: 1424 ggccacaacctcttcagtatgtggtgaacgctgcattccttgcttctttgtacggtgact 1483 Query: 203 atctggacactgcagatacaccagggtggtattgtgg 239 |||| || |||||||||| || || ||||||||||| Sbjct: 1484 atcttgaggctgcagatacccctggctggtattgtgg 1520
>gb|AY660967.1| Populus tremula x Populus tremuloides Cel9A mRNA, complete cds Length = 1860 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 133 aaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctg 192 ||||||||| ||||||| || |||||||| ||||||||||| || ||||| || | || Sbjct: 1303 aaccatggaaggcctcagccccttcagtatgtcgtcaatgctgccttcctagcaacccta 1362 Query: 193 tatgctgattatctggacactgcagatacaccagggtggtattgtggacctaatttcta 251 | | ||||||||| || |||| |||||||| || ||||| |||||||| |||||||| Sbjct: 1363 tttagtgattatcttgaagctgctgatacacctggatggtactgtggaccaaatttcta 1421 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 469 ggagcaatggttgctgggcctgacaagcatgatgg 503 ||||| ||||||||||| ||||||| ||||||||| Sbjct: 1639 ggagccatggttgctggccctgacaggcatgatgg 1673
>gb|AY535003.1| Populus tremuloides endo-1,4-beta-glucanase (Kor1) mRNA, complete cds Length = 2562 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 133 aaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctg 192 ||||||||| ||||||| || |||||||| ||||||||||| || ||||| || | || Sbjct: 1565 aaccatggaaggcctcagccccttcagtatgtcgtcaatgctgccttcctagcaacccta 1624 Query: 193 tatgctgattatctggacactgcagatacaccagggtggtattgtggacctaatttcta 251 | | ||||||||| || |||| |||||||| || ||||| |||||||| |||||||| Sbjct: 1625 tttagtgattatcttgaagctgctgatacacctggatggtactgtggaccaaatttcta 1683 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 469 ggagcaatggttgctgggcctgacaagcatgatgg 503 ||||| ||||||||||| ||||||| ||||||||| Sbjct: 1901 ggagccatggttgctggccctgacaggcatgatgg 1935
>gb|DQ382354.1| Glycine max clone pSC12a endo-1,4-beta-glucancase precursor (Cel12) mRNA, partial cds Length = 1841 Score = 61.9 bits (31), Expect = 2e-06 Identities = 118/147 (80%) Strand = Plus / Plus Query: 198 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctataccac 257 ||||||||| || |||| |||||||| || |||||||||||||||||||||| | | || Sbjct: 1395 tgattatcttgatgctgctgatacacctggatggtattgtggacctaatttcttttcaac 1454 Query: 258 agatgtcctccgcaagtttgcaaagtcacagcttgattacattctaggcaagaacccaca 317 || || ||||| | ||||| ||||| ||| |||||||||| || || || |||||| Sbjct: 1455 cgacgtgctccgtagctttgccaagtcccagattgattacatccttggaaataacccaag 1514 Query: 318 aaagatgagctacgtcgtgggttttgg 344 || ||||| || ||||| |||||||| Sbjct: 1515 gaaaatgagttatgtcgtaggttttgg 1541 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 475 atggttgctgggcctgacaagcatgatggcttc 507 |||||||| || ||||||||||||||||||||| Sbjct: 1672 atggttgccggtcctgacaagcatgatggcttc 1704
>dbj|AB084463.1| Pyrus communis PC-EG1 mRNA for endo-1,4-beta-D-glucanase, encodes membrane-spanning domain, complete cds Length = 2242 Score = 60.0 bits (30), Expect = 7e-06 Identities = 189/242 (78%) Strand = Plus / Plus Query: 10 agcccagggtatccttatgaagaaatattaaggacattccacaaccaaactgacaatgtc 69 ||||| |||||||| ||||||||||| || |||||||| |||||||| ||| || || Sbjct: 1260 agccctgggtatccgtatgaagaaattttgaggacatttcacaaccagactagcataatc 1319 Query: 70 atgtgctcatatttaccagtattcaattcattcaacttcactaaaggaggactgatacaa 129 ||||||||||| | ||||| || | | |||||| || |||||||| |||| || Sbjct: 1320 atgtgctcatacctgccagtttttacaaccttcaacagaaccaaaggaggcttgatccag 1379 Query: 130 ctcaaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctct 189 | || |||||| |||| ||||| |||||||| || ||||||||||| ||| | || | Sbjct: 1380 ttgaatcatggaaggccacaacctcttcagtatgtagtcaatgcagccttcttagctaca 1439 Query: 190 ctgtatgctgattatctggacactgcagatacaccagggtggtattgtggacctaatttc 249 ||||| ||| ||||| || |||| |||||||| ||||||||||||||||| || ||| Sbjct: 1440 ttgtatagtgagtatcttgatgctgctgatacacctgggtggtattgtggacccaacttc 1499 Query: 250 ta 251 || Sbjct: 1500 ta 1501 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 475 atggttgctgggcctgacaagcatgatgg 503 ||||||||||| |||||||| |||||||| Sbjct: 1725 atggttgctggtcctgacaaacatgatgg 1753
>gb|BT013492.1| Lycopersicon esculentum clone 132176F, mRNA sequence Length = 2314 Score = 58.0 bits (29), Expect = 3e-05 Identities = 137/173 (79%) Strand = Plus / Plus Query: 10 agcccagggtatccttatgaagaaatattaaggacattccacaaccaaactgacaatgtc 69 ||||| || ||||||||||||||||| ||||||||||| || ||||| ||| || || Sbjct: 1332 agccctggatatccttatgaagaaattttaaggacatttcataaccagactagcataatc 1391 Query: 70 atgtgctcatatttaccagtattcaattcattcaacttcactaaaggaggactgatacaa 129 |||||||| || | ||| | |||| ||| || || ||| |||||||| || || ||| Sbjct: 1392 atgtgctcctacctgccaatcttcacttcttttaatcgcacaaaaggagggctaatccaa 1451 Query: 130 ctcaaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattcct 182 | ||||||||| ||||||| || || ||||| || ||||||||||| ||||| Sbjct: 1452 ttaaaccatggaaggcctcagcctctccagtatgtagtcaatgcagccttcct 1504 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 469 ggagcaatggttgctgggcctgacaagcatgatgg 503 ||||| ||||||||||| || |||||||||||||| Sbjct: 1791 ggagccatggttgctggaccagacaagcatgatgg 1825
>gb|U78526.1|LEU78526 Lycopersicon esculentum endo-1,4-beta-glucanase (Cel3) mRNA, complete cds Length = 2286 Score = 58.0 bits (29), Expect = 3e-05 Identities = 137/173 (79%) Strand = Plus / Plus Query: 10 agcccagggtatccttatgaagaaatattaaggacattccacaaccaaactgacaatgtc 69 ||||| || ||||||||||||||||| ||||||||||| || ||||| ||| || || Sbjct: 1322 agccctggatatccttatgaagaaattttaaggacatttcataaccagactagcataatc 1381 Query: 70 atgtgctcatatttaccagtattcaattcattcaacttcactaaaggaggactgatacaa 129 |||||||| || | ||| | |||| ||| || || ||| |||||||| || || ||| Sbjct: 1382 atgtgctcctacctgccaatcttcacttcttttaatcgcacaaaaggagggctaatccaa 1441 Query: 130 ctcaaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattcct 182 | ||||||||| ||||||| || || ||||| || ||||||||||| ||||| Sbjct: 1442 ttaaaccatggaaggcctcagcctctccagtatgtagtcaatgcagccttcct 1494 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 469 ggagcaatggttgctgggcctgacaagcatgatgg 503 ||||| ||||||||||| || |||||||||||||| Sbjct: 1781 ggagccatggttgctggaccagacaagcatgatgg 1815
>ref|NM_124350.2| Arabidopsis thaliana KOR1 (KORRIGAN); hydrolase, hydrolyzing O-glycosyl compounds AT5G49720 (KOR1) mRNA, complete cds Length = 2360 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 198 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 252 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 1488 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 1542 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 469 ggagcaatggttgctgggcctgacaagc 496 ||||| ||||||||||| |||||||||| Sbjct: 1759 ggagccatggttgctggtcctgacaagc 1786
>gb|BT013449.1| Lycopersicon esculentum clone 132105F, mRNA sequence Length = 2203 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 112 aaaggaggactgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaat 171 ||||| || |||||| || | ||||||||| ||||||| ||||||||||| || |||||| Sbjct: 1341 aaaggtgggctgatagaattaaaccatggaaggcctcagccacttcagtatgtagtcaat 1400 Query: 172 gcagcattcct 182 || || ||||| Sbjct: 1401 gctgccttcct 1411 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 229 tggtattgtggacctaatttctataccacagatgtcct 266 ||||||||||||||||||||||| |||| |||||||| Sbjct: 1458 tggtattgtggacctaatttctactccaccgatgtcct 1495
>dbj|AK222193.1| Arabidopsis thaliana mRNA for cellulase homolog OR16pep precursor, partial cds, clone: RAFL24-21-F09 Length = 1102 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 198 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 252 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 274 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 328 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 469 ggagcaatggttgctgggcctgacaagc 496 ||||| ||||||||||| |||||||||| Sbjct: 545 ggagccatggttgctggtcctgacaagc 572
>gb|AY037218.1| Arabidopsis thaliana AT5g49720/K2I5_8 mRNA, complete cds Length = 2307 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 198 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 252 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 1488 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 1542 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 469 ggagcaatggttgctgggcctgacaagc 496 ||||| ||||||||||| |||||||||| Sbjct: 1759 ggagccatggttgctggtcctgacaagc 1786
>gb|AY086165.1| Arabidopsis thaliana clone 21922 mRNA, complete sequence Length = 2303 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 198 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 252 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 1488 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 1542 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 469 ggagcaatggttgctgggcctgacaagc 496 ||||| ||||||||||| |||||||||| Sbjct: 1759 ggagccatggttgctggtcctgacaagc 1786
>dbj|AB025613.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2I5 Length = 71807 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 198 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 252 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 35438 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 35384 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 469 ggagcaatggttgctgggcctgacaagc 496 ||||| ||||||||||| |||||||||| Sbjct: 34997 ggagccatggttgctggtcctgacaagc 34970
>gb|BT002221.1| Arabidopsis thaliana At5g49720/K2I5_8 mRNA, complete cds Length = 1866 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 198 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 252 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 1368 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 1422 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 469 ggagcaatggttgctgggcctgacaagc 496 ||||| ||||||||||| |||||||||| Sbjct: 1639 ggagccatggttgctggtcctgacaagc 1666
>gb|U37702.1|ATU37702 Arabidopsis thaliana cellulase (OR16pep) mRNA, complete cds Length = 2257 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 198 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 252 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 1438 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 1492 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 469 ggagcaatggttgctgggcctgacaagc 496 ||||| ||||||||||| |||||||||| Sbjct: 1709 ggagccatggttgctggtcctgacaagc 1736
>gb|AF073875.1|AF073875 Arabidopsis thaliana endo-1,4-beta-D-glucanase KORRIGAN (KOR) gene, KOR-1 allele, complete cds Length = 2873 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 198 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 252 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 1884 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 1938 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 469 ggagcaatggttgctgggcctgacaagc 496 ||||| ||||||||||| |||||||||| Sbjct: 2325 ggagccatggttgctggtcctgacaagc 2352
>gb|AF074375.1|AF074375 Arabidopsis thaliana cellulase (DEC) mRNA, complete cds Length = 2179 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 198 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 252 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 1431 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 1485 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 469 ggagcaatggttgctgggcctgacaagc 496 ||||| ||||||||||| |||||||||| Sbjct: 1702 ggagccatggttgctggtcctgacaagc 1729
>gb|AF074092.1|AF074092 Arabidopsis thaliana cellulase (DEC) gene, complete cds Length = 4033 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 198 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 252 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 2723 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 2777 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 469 ggagcaatggttgctgggcctgacaagc 496 ||||| ||||||||||| |||||||||| Sbjct: 3164 ggagccatggttgctggtcctgacaagc 3191
>ref|NM_118559.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds AT4G24260 mRNA, complete cds Length = 1863 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 ggagcaatggttgctgggcctgacaagcatga 500 ||||||||||||||||| || ||||||||||| Sbjct: 1639 ggagcaatggttgctggaccagacaagcatga 1670
>emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BAC clone T22A6 (ESSA project) Length = 108459 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 ggagcaatggttgctgggcctgacaagcatga 500 ||||||||||||||||| || ||||||||||| Sbjct: 29146 ggagcaatggttgctggaccagacaagcatga 29115
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61 Length = 198402 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 ggagcaatggttgctgggcctgacaagcatga 500 ||||||||||||||||| || ||||||||||| Sbjct: 45803 ggagcaatggttgctggaccagacaagcatga 45772
>gb|AC114689.4| Homo sapiens chromosome 18, clone RP11-638L3, complete sequence Length = 177781 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 287 agcttgattacattctaggcaa 308 |||||||||||||||||||||| Sbjct: 3171 agcttgattacattctaggcaa 3150
>gb|AC079239.6| Homo sapiens BAC clone RP11-722M1 from 4, complete sequence Length = 182406 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 64 aatgtcatgtgctcatatttac 85 |||||||||||||||||||||| Sbjct: 83192 aatgtcatgtgctcatatttac 83213
>ref|NM_179018.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds AT4G09740 mRNA, complete cds Length = 1437 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 274 tttgcaaagtcacagcttgattacattct 302 ||||| ||||||||| ||||||||||||| Sbjct: 1099 tttgccaagtcacaggttgattacattct 1127
>emb|CR381708.8| Zebrafish DNA sequence from clone DKEYP-10H11 in linkage group 1, complete sequence Length = 161310 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 tcatgtgctcatatttaccagtatt 92 |||||||||||||||||||| |||| Sbjct: 69199 tcatgtgctcatatttaccaatatt 69175
>emb|AJ242807.1|BNA242807 Brassica napus Cel16 gene for endo-1,4-beta-D-glucanase (cellulase) Length = 5454 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 212 ctgcagatacaccagggtggtattgtggacctaatttctat 252 |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 3694 ctgctgatactcctggatggtactgtggacctaatttctat 3734 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 469 ggagcaatggttgctgggcctgacaagc 496 ||||| ||||||||||| |||||||||| Sbjct: 4225 ggagccatggttgctggtcctgacaagc 4252
>gb|AC069359.5| Homo sapiens chromosome 8, clone CTD-2003P13, complete sequence Length = 86991 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 246 tttctataccacagatgtcct 266 ||||||||||||||||||||| Sbjct: 60177 tttctataccacagatgtcct 60157
>ref|XM_629076.1| Dictyostelium discoideum hypothetical protein (DDB0192074), partial mRNA Length = 3399 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ttcaattcattcaacttcac 110 |||||||||||||||||||| Sbjct: 1086 ttcaattcattcaacttcac 1105
>emb|BX511137.14| Zebrafish DNA sequence from clone DKEY-192A11 in linkage group 7, complete sequence Length = 214145 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 gaagaaatattaaggacatt 47 |||||||||||||||||||| Sbjct: 23166 gaagaaatattaaggacatt 23147
>emb|AL773535.8| Human DNA sequence from clone DAQB-170I5 on chromosome 6 Contains the 5'end of the HCG18 gene for HLA complex group 18, the TRIM39 gene for tripartite motif-containing 39, the RPP21 gene for ribonuclease P 21kDa subunit, the HLA-N pseudogene for major histocompatibility complex, class I, N (pseudogene), the HCG19P pseudogene for HLA complex group 19, the UBQLN1P pseudogene for ubiquilin 1, and 2 CpG islands, complete sequence Length = 88074 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tcttcctaagcccagggtat 21 |||||||||||||||||||| Sbjct: 2846 tcttcctaagcccagggtat 2827
>emb|BX248580.4| Human DNA sequence from clone DASS-179M10 on chromosome 6, complete sequence Length = 57170 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tcttcctaagcccagggtat 21 |||||||||||||||||||| Sbjct: 21970 tcttcctaagcccagggtat 21951
>emb|AL662832.5| Human DNA sequence from clone XXbac-141O14 on chromosome 6 contains the 5' end of the TRIM26 gene for tripartite motif containing 26, two putative novel transcript, a tripartite motif containing 26 (TRIM26) pseudogene, a MHC class 1 pseudogene, the TRIM39 gene for tripartite motif containing 39, the RPP21 gene for ribonuclease p subunit and four CpG islands, complete sequence Length = 161348 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tcttcctaagcccagggtat 21 |||||||||||||||||||| Sbjct: 118137 tcttcctaagcccagggtat 118118
>emb|AL662795.5| Human DNA sequence from clone XXbac-283O16 on chromosome 6 contains the TRIM39 gene for tripartite motif containing 39, the RPP21 gene for ribonuclease P subunit, a putative novel transcript and two CpG islands, complete sequence Length = 115104 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tcttcctaagcccagggtat 21 |||||||||||||||||||| Sbjct: 41062 tcttcctaagcccagggtat 41043
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 tattcaattcattcaacttc 108 |||||||||||||||||||| Sbjct: 127503 tattcaattcattcaacttc 127522
>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06, complete sequence Length = 151506 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 gtgtcaaatatggatgcaaa 417 |||||||||||||||||||| Sbjct: 8515 gtgtcaaatatggatgcaaa 8534
>emb|AJ505579.1|LLU505579 Lupinus luteus mRNA for putative acid phosphatase (acpase2 gene) Length = 1701 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cttgcctctctgtatgctga 200 |||||||||||||||||||| Sbjct: 1285 cttgcctctctgtatgctga 1266
>emb|CR759281.4| Human DNA sequence from clone DADB-50B12 on chromosome 6, complete sequence Length = 107020 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tcttcctaagcccagggtat 21 |||||||||||||||||||| Sbjct: 39437 tcttcctaagcccagggtat 39418
>gb|AC092994.4| Homo sapiens 3 BAC RP11-656A15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159445 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 caaagtcacagcttgattac 297 |||||||||||||||||||| Sbjct: 24268 caaagtcacagcttgattac 24249
>dbj|AK081831.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130080K17 product:hypothetical protein, full insert sequence Length = 1228 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 taggcaagaacccacaaaagatga 325 |||||||||||||| ||||||||| Sbjct: 808 taggcaagaacccagaaaagatga 785
>gb|AC148683.1| Macaca mulatta Major Histocompatibility Complex BAC MMU162B17, complete sequence Length = 181079 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tcttcctaagcccagggtat 21 |||||||||||||||||||| Sbjct: 135624 tcttcctaagcccagggtat 135605
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 gtgtcaaatatggatgcaaa 417 |||||||||||||||||||| Sbjct: 33236254 gtgtcaaatatggatgcaaa 33236273
>emb|BX927189.6| Human DNA sequence from clone DAMA-83L10 on chromosome 6, complete sequence Length = 124330 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tcttcctaagcccagggtat 21 |||||||||||||||||||| Sbjct: 113741 tcttcctaagcccagggtat 113722
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tcttcctaagcccagggtat 21 |||||||||||||||||||| Sbjct: 2086512 tcttcctaagcccagggtat 2086531
>emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on chromosome 2, complete sequence Length = 180092 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 taggcaagaacccacaaaagatga 325 |||||||||||||| ||||||||| Sbjct: 173299 taggcaagaacccagaaaagatga 173322
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tcttcctaagcccagggtat 21 |||||||||||||||||||| Sbjct: 1634491 tcttcctaagcccagggtat 1634510
>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region Length = 1750601 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tcttcctaagcccagggtat 21 |||||||||||||||||||| Sbjct: 1176330 tcttcctaagcccagggtat 1176349
>gb|AC154522.3| Mus musculus BAC clone RP23-480O9 from 13, complete sequence Length = 176876 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 agtttgcaaagtcacagctt 291 |||||||||||||||||||| Sbjct: 59351 agtttgcaaagtcacagctt 59370
>gb|AC115761.12| Mus musculus chromosome 7, clone RP23-62N10, complete sequence Length = 215013 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 aaatattaaggacattccacaacc 55 |||||||||| ||||||||||||| Sbjct: 77487 aaatattaagaacattccacaacc 77510
>emb|AL954672.9| Zebrafish DNA sequence from clone CH211-237K3 in linkage group 7, complete sequence Length = 180588 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 gaagaaatattaaggacatt 47 |||||||||||||||||||| Sbjct: 127029 gaagaaatattaaggacatt 127048
>gb|AC004188.1|AC004188 Homo sapiens clone UWGC:y17c090 from 6p21, complete sequence Length = 40057 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tcttcctaagcccagggtat 21 |||||||||||||||||||| Sbjct: 29163 tcttcctaagcccagggtat 29182
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 gtgtcaaatatggatgcaaa 417 |||||||||||||||||||| Sbjct: 118903 gtgtcaaatatggatgcaaa 118922
>dbj|AB014087.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region, Cosmid clone:TY6D9, complete sequence Length = 27356 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tcttcctaagcccagggtat 21 |||||||||||||||||||| Sbjct: 2921 tcttcctaagcccagggtat 2940
>emb|AJ297524.1|MCI297524 Mucor circinelloides cigB gene, exons 1-7 Length = 4341 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ccacaaccaaactgacaatg 67 |||||||||||||||||||| Sbjct: 2916 ccacaaccaaactgacaatg 2935 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,465,863 Number of Sequences: 3902068 Number of extensions: 4465863 Number of successful extensions: 81419 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81046 Number of HSP's gapped (non-prelim): 356 length of query: 507 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 485 effective length of database: 17,147,199,772 effective search space: 8316391889420 effective search space used: 8316391889420 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
