ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd1d23 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1247 bits (629), Expect = 0.0 Identities = 629/629 (100%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119635 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 119576 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119575 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 119516 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119515 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 119456 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119455 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 119396 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119395 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 119336 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119335 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 119276 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119275 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 119216 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119215 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 119156 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119155 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 119096 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119095 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 119036 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 119035 taaggcccctaaatgaccgctcagtgata 119007 Score = 1247 bits (629), Expect = 0.0 Identities = 629/629 (100%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95259 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 95318 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95319 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 95378 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95379 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 95438 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95439 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 95498 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95499 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 95558 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95559 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 95618 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95619 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 95678 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95679 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 95738 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95739 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 95798 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95799 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 95858 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 95859 taaggcccctaaatgaccgctcagtgata 95887
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118416 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 118357 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118356 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 118297 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118296 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 118237 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 118236 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 118177 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118176 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 118117 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118116 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 118057 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118056 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 117997 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117996 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 117937 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117936 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 117877 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117876 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 117817 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 117816 taaggcccctaaatgaccgctcagtgata 117788
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119500 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 119441 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119440 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 119381 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119380 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 119321 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 119320 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 119261 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119260 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 119201 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119200 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 119141 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119140 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 119081 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119080 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 119021 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119020 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 118961 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118960 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 118901 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 118900 taaggcccctaaatgaccgctcagtgata 118872 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95656 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 95715 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95716 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 95775 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95776 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 95835 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 95836 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 95895 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95896 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 95955 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95956 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 96015 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96016 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 96075 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96076 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 96135 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96136 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 96195 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96196 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 96255 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 96256 taaggcccctaaatgaccgctcagtgata 96284
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119500 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 119441 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119440 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 119381 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119380 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 119321 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 119320 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 119261 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119260 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 119201 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119200 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 119141 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119140 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 119081 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119080 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 119021 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119020 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 118961 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118960 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 118901 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 118900 taaggcccctaaatgaccgctcagtgata 118872 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95656 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 95715 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95716 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 95775 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95776 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 95835 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 95836 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 95895 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95896 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 95955 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95956 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 96015 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96016 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 96075 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96076 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 96135 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96136 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 96195 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96196 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 96255 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 96256 taaggcccctaaatgaccgctcagtgata 96284
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119449 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 119390 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119389 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 119330 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119329 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 119270 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 119269 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 119210 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119209 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 119150 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119149 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 119090 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119089 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 119030 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119029 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 118970 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118969 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 118910 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118909 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 118850 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 118849 taaggcccctaaatgaccgctcagtgata 118821 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95601 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 95660 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95661 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 95720 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95721 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 95780 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 95781 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 95840 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95841 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 95900 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95901 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 95960 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95961 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 96020 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96021 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 96080 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96081 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 96140 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96141 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 96200 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 96201 taaggcccctaaatgaccgctcagtgata 96229
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508234 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 31508293 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508294 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 31508353 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508354 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 31508413 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 31508414 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 31508473 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508474 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 31508533 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508534 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 31508593 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508594 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 31508653 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508654 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 31508713 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508714 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 31508773 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508774 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 31508833 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 31508834 taaggcccctaaatgaccgctcagtgata 31508862 Score = 155 bits (78), Expect = 2e-34 Identities = 78/78 (100%) Strand = Plus / Minus Query: 564 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 624 aatgaccgctcagtgata 641 |||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgata 11513240 Score = 107 bits (54), Expect = 4e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 580 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 639 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 640 ta 641 || Sbjct: 25722118 ta 25722117 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 583 gtcgagagggaaacagcccggatcaccagctaaggccc 620 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 482 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 536 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84362 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 84303 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84302 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 84243 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84242 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 84183 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 84182 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 84123 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84122 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 84063 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84062 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 84003 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84002 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 83943 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83942 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 83883 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83882 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 83823 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83822 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 83763 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 83762 taaggcccctaaatgaccgctcagtgata 83734
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119469 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 119410 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119409 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 119350 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119349 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 119290 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 119289 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 119230 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119229 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 119170 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119169 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 119110 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119109 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 119050 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119049 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 118990 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118989 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 118930 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118929 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 118870 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 118869 taaggcccctaaatgaccgctcagtgata 118841 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95649 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 95708 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95709 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 95768 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95769 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 95828 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 95829 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 95888 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95889 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 95948 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95949 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 96008 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96009 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 96068 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96069 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 96128 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96129 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 96188 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96189 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 96248 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 96249 taaggcccctaaatgaccgctcagtgata 96277
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14423 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 14482 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14483 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 14542 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14543 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 14602 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 14603 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 14662 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14663 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 14722 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14723 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 14782 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14783 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 14842 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14843 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 14902 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14903 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 14962 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14963 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 15022 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 15023 taaggcccctaaatgaccgctcagtgata 15051 Score = 1215 bits (613), Expect = 0.0 Identities = 626/629 (99%), Gaps = 1/629 (0%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122698 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 122757 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122758 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 122817 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122818 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 122877 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 122878 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 122937 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 122938 gtcactgcttatggacccgaac-taggtgatctatccatgaccaggatgaagcttggatg 122996 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122997 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 123056 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123057 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 123116 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123117 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 123176 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123177 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 123236 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123237 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 123296 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 123297 taaggcccctaaatgaccgctcagtgata 123325
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141231 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 141290 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141291 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 141350 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141351 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 141410 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 141411 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 141470 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141471 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 141530 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141531 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 141590 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141591 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 141650 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141651 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 141710 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141711 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 141770 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141771 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 141830 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 141831 taaggcccctaaatgaccgctcagtgata 141859
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58188 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 58129 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58128 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 58069 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58068 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 58009 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 58008 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 57949 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57948 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 57889 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57888 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 57829 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57828 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 57769 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57768 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 57709 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57708 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 57649 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57648 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 57589 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 57588 taaggcccctaaatgaccgctcagtgata 57560
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268583 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 9268642 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268643 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 9268702 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268703 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 9268762 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 9268763 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 9268822 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268823 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 9268882 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268883 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 9268942 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268943 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 9269002 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269003 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 9269062 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269063 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 9269122 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269123 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 9269182 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 9269183 taaggcccctaaatgaccgctcagtgata 9269211 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056497 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 9056556 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056557 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 9056616 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056617 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 9056676 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 9056677 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 9056736 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056737 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 9056796 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056797 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 9056856 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056857 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 9056916 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056917 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 9056976 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056977 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 9057036 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057037 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 9057096 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 9057097 taaggcccctaaatgaccgctcagtgata 9057125 Score = 1231 bits (621), Expect = 0.0 Identities = 627/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228083 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 9228142 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228143 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 9228202 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228203 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 9228262 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 9228263 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 9228322 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 9228323 gtcactgcttatggacccgaacctaggtgatctatccatgaccaggatgaagcttggatg 9228382 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228383 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 9228442 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228443 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 9228502 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228503 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 9228562 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228563 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 9228622 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228623 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 9228682 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 9228683 taaggcccctaaatgaccgctcagtgata 9228711 Score = 1215 bits (613), Expect = 0.0 Identities = 626/629 (99%), Gaps = 1/629 (0%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164672 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 9164731 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164732 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 9164791 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164792 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 9164851 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 9164852 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 9164911 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 9164912 gtcactgcttatggacccgaac-taggtgatctatccatgaccaggatgaagcttggatg 9164970 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164971 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 9165030 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165031 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 9165090 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165091 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 9165150 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165151 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 9165210 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165211 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 9165270 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 9165271 taaggcccctaaatgaccgctcagtgata 9165299 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 28 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 87 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 88 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 134 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938568 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 19938627 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938628 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 19938687 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938688 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 19938747 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 19938748 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 19938807 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938808 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 19938867 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938868 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 19938927 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938928 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 19938987 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938988 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 19939047 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939048 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 19939107 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939108 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 19939167 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 19939168 taaggcccctaaatgaccgctcagtgata 19939196 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276863 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 10276804 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276803 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 10276744 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276743 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 10276684 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10276683 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 10276624 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276623 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 10276564 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276563 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 10276504 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276503 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 10276444 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276443 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 10276384 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276383 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 10276324 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276323 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 10276264 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 10276263 taaggcccctaaatgaccgctcagtgata 10276235 Score = 1231 bits (621), Expect = 0.0 Identities = 627/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10387435 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaa 10387494 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387495 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 10387554 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387555 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 10387614 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10387615 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 10387674 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387675 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 10387734 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387735 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 10387794 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387795 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 10387854 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387855 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 10387914 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387915 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 10387974 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387975 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 10388034 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 10388035 taaggcccctaaatgaccgctcagtgata 10388063 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 46 agtaccgtgagggaaaggtgaaaagaacccc 76 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 54.0 bits (27), Expect = 6e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 489 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 548 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 549 tcggccagtgagacgatgggggataagcttcatcgtcgagag 590 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598750 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 31598809 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598810 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 31598869 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598870 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 31598929 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 31598930 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 31598989 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598990 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 31599049 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599050 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 31599109 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599110 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 31599169 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599170 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 31599229 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599230 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 31599289 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599290 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 31599349 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 31599350 taaggcccctaaatgaccgctcagtgata 31599378 Score = 155 bits (78), Expect = 2e-34 Identities = 78/78 (100%) Strand = Plus / Minus Query: 564 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 624 aatgaccgctcagtgata 641 |||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgata 11510003 Score = 107 bits (54), Expect = 4e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 580 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 639 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 640 ta 641 || Sbjct: 25813427 ta 25813426 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 583 gtcgagagggaaacagcccggatcaccagctaaggccc 620 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 482 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 536 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526066 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 33526125 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526126 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 33526185 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526186 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 33526245 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 33526246 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 33526305 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526306 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 33526365 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526366 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 33526425 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526426 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 33526485 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526486 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 33526545 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526546 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 33526605 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526606 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 33526665 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 33526666 taaggcccctaaatgaccgctcagtgata 33526694 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 50 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 109 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 110 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 169 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 170 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 64 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 123 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 124 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 173 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 121 bits (61), Expect = 3e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 573 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 632 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 633 tcagtgata 641 ||||||||| Sbjct: 527811 tcagtgata 527819 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 30 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 76 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 30 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 76 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 57 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 95 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47475 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 47416 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47415 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 47356 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47355 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 47296 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 47295 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 47236 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47235 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 47176 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47175 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 47116 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47115 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 47056 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47055 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 46996 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46995 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 46936 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46935 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 46876 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 46875 taaggcccctaaatgaccgctcagtgata 46847
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71263 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 71322 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71323 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 71382 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71383 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 71442 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 71443 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 71502 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71503 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 71562 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71563 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 71622 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71623 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 71682 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71683 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 71742 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71743 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 71802 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71803 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 71862 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 71863 taaggcccctaaatgaccgctcagtgata 71891 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 30 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 76 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 30 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 76 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 94 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 154 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 155 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 214 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 215 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 274 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 334 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 394 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 454 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 455 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 514 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 515 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 574 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 575 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 634 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 635 taaggcccctaaatgaccgctcagtgata 663
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 289 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 349 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 409 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 410 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 469 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 529 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 589 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 590 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 649 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 650 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 709 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 769 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 829 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 830 taaggcccctaaatgaccgctcagtgata 858
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 401 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 461 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 521 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 522 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 581 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 641 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 701 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 702 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 761 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 821 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 822 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 881 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 882 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 941 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 942 taaggcccctaaatgaccgctcagtgata 970
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 160 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 220 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 280 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 281 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 340 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 400 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 460 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 520 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 580 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 640 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 700 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 701 taaggcccctaaatgaccgctcagtgata 729
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 232 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 291 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 351 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 352 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 411 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 412 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 471 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 472 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 531 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 532 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 591 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 592 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 651 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 652 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 711 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 771 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 831 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 832 taaggcccctaaatgaccgctcagtgata 860
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 289 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 349 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 409 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 410 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 469 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 529 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 589 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 590 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 649 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 650 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 709 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 769 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 829 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 830 taaggcccctaaatgaccgctcagtgata 858
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 232 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 291 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 351 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 352 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 411 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 412 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 471 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 472 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 531 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 532 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 591 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 592 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 651 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 652 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 711 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 771 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 831 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 832 taaggcccctaaatgaccgctcagtgata 860
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949844 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 19949903 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949904 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 19949963 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949964 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 19950023 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 19950024 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 19950083 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950084 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 19950143 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950144 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 19950203 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950204 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 19950263 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950264 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 19950323 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950324 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 19950383 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950384 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 19950443 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 19950444 taaggcccctaaatgaccgctcagtgata 19950472 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282902 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 10282843 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282842 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 10282783 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282782 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 10282723 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10282722 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 10282663 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282662 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 10282603 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282602 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 10282543 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282542 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 10282483 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282482 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 10282423 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282422 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 10282363 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282362 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 10282303 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 10282302 taaggcccctaaatgaccgctcagtgata 10282274 Score = 1231 bits (621), Expect = 0.0 Identities = 627/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10393474 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaa 10393533 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393534 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 10393593 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393594 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 10393653 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10393654 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 10393713 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393714 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 10393773 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393774 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 10393833 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393834 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 10393893 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393894 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 10393953 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393954 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 10394013 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394014 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 10394073 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 10394074 taaggcccctaaatgaccgctcagtgata 10394102 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 30 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 76 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 54.0 bits (27), Expect = 6e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 489 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 548 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 549 tcggccagtgagacgatgggggataagcttcatcgtcgagag 590 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119443 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 119384 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119383 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 119324 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119323 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 119264 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 119263 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 119204 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119203 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 119144 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119143 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 119084 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119083 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 119024 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119023 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 118964 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118963 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 118904 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118903 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 118844 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 118843 taaggcccctaaatgaccgctcagtgata 118815 Score = 1239 bits (625), Expect = 0.0 Identities = 628/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95596 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 95655 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95656 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 95715 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95716 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 95775 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 95776 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 95835 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95836 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 95895 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95896 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 95955 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95956 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 96015 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96016 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 96075 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96076 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 96135 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96136 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 96195 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 96196 taaggcccctaaatgaccgctcagtgata 96224
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1231 bits (621), Expect = 0.0 Identities = 627/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 93827 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaa 93886 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93887 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 93946 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93947 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 94006 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 94007 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 94066 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94067 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 94126 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94127 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 94186 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94187 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 94246 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94247 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 94306 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94307 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 94366 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94367 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 94426 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 94427 taaggcccctaaatgaccgctcagtgata 94455
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1231 bits (621), Expect = 0.0 Identities = 627/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20658 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 20717 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20718 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 20777 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20778 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 20837 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 20838 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 20897 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20898 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 20957 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20958 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 21017 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21018 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 21077 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21078 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 21137 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21138 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 21197 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21198 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 21257 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 21258 taaggcccctaaatgaccgctcagtgata 21286 Score = 1193 bits (602), Expect = 0.0 Identities = 624/630 (99%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44460 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 44401 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44400 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 44341 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44340 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 44281 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| ||||||| |||||||||||| ||||||||||||| ||||||||||| Sbjct: 44280 ttggttaagggaatggaaccctccggagccgtagtgaaagcgagtcttcatagggcgatt 44221 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44220 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 44161 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44160 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 44101 Query: 373 gggtg-aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 431 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 44100 gggtgtaaatgccactcgaacccagagctagttggttctccccgaaatgcgttgaggcgc 44041 Query: 432 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44040 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 43981 Query: 492 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43980 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 43921 Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43920 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 43861 Query: 612 ctaaggcccctaaatgaccgctcagtgata 641 |||||||||||||||||||||||||||||| Sbjct: 43860 ctaaggcccctaaatgaccgctcagtgata 43831
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1231 bits (621), Expect = 0.0 Identities = 627/629 (99%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1089 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 1030 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1029 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 970 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 910 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 909 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 850 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 790 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 730 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 670 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 669 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 610 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 609 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 550 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 549 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 490 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 489 taaggcccctaaatgaccgctcagtgata 461
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1231 bits (621), Expect = 0.0 Identities = 627/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 27891 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaa 27950 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27951 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 28010 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28011 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 28070 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 28071 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 28130 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28131 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 28190 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28191 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 28250 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28251 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 28310 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28311 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 28370 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28371 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 28430 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28431 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 28490 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 28491 taaggcccctaaatgaccgctcagtgata 28519
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1231 bits (621), Expect = 0.0 Identities = 627/629 (99%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123299 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 123240 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123239 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 123180 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123179 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 123120 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 123119 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 123060 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123059 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 123000 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122999 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 122940 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122939 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 122880 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122879 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 122820 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122819 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 122760 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122759 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 122700 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 122699 taaggcccctaaatgaccgctcagtgata 122671 Score = 1231 bits (621), Expect = 0.0 Identities = 627/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99538 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 99597 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99598 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 99657 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99658 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 99717 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 99718 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 99777 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99778 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 99837 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99838 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 99897 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99898 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 99957 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99958 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 100017 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100018 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 100077 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100078 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 100137 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 100138 taaggcccctaaatgaccgctcagtgata 100166
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1231 bits (621), Expect = 0.0 Identities = 627/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 288 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 348 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 408 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 409 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 468 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 528 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 529 aaaccaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 588 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 589 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 648 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 708 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 768 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 769 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 828 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 829 taaggcccctaaatgaccgctcagtgata 857
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1231 bits (621), Expect = 0.0 Identities = 627/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 110 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 111 cccccagtgggtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggg 170 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 230 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 231 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 290 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 291 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 350 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 410 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 470 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 471 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 530 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 590 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 591 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 650 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 651 taaggcccctaaatgaccgctcagtgata 679
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1231 bits (621), Expect = 0.0 Identities = 627/629 (99%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124016 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 123957 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123956 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 123897 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123896 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 123837 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 123836 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 123777 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123776 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 123717 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123716 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 123657 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123656 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 123597 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123596 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 123537 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123536 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 123477 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123476 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 123417 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 123416 taaggcccctaaatgaccgctcagtgata 123388 Score = 1231 bits (621), Expect = 0.0 Identities = 627/629 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100215 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 100274 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100275 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 100334 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100335 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 100394 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 100395 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 100454 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100455 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 100514 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100515 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 100574 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100575 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 100634 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100635 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 100694 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100695 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 100754 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100755 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 100814 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 100815 taaggcccctaaatgaccgctcagtgata 100843
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 1225 bits (618), Expect = 0.0 Identities = 621/622 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 286 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 287 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 346 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 347 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 406 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 407 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 466 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 467 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 526 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 586 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 587 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 646 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 706 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 707 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 766 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 826 Query: 613 taaggcccctaaatgaccgctc 634 |||||||||||||||||||||| Sbjct: 827 taaggcccctaaatgaccgctc 848
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1223 bits (617), Expect = 0.0 Identities = 626/629 (99%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241698 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 9241639 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241638 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 9241579 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 9241578 gaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggc 9241519 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 9241518 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 9241459 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241458 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 9241399 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9241398 aaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatgagttgtggttag 9241339 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241338 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 9241279 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241278 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 9241219 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241218 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 9241159 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241158 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 9241099 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 9241098 taaggcccctaaatgaccgctcagtgata 9241070 Score = 188 bits (95), Expect = 2e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 454 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 513 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 514 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 573 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 574 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 619 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1223 bits (617), Expect = 0.0 Identities = 626/629 (99%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52911 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 52852 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52851 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 52792 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 52791 gaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggc 52732 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 52731 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 52672 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52671 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 52612 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 52611 aaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatgagttgtggttag 52552 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52551 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 52492 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52491 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 52432 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52431 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 52372 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 52312 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 52311 taaggcccctaaatgaccgctcagtgata 52283
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1207 bits (609), Expect = 0.0 Identities = 625/629 (99%), Gaps = 1/629 (0%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123239 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 123180 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123179 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 123120 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123119 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 123060 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 123059 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 123000 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122999 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 122940 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122939 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 122880 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122879 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 122820 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 122819 gcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtac 122761 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 122701 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 122641 Query: 613 taaggcccctaaatgaccgctcagtgata 641 |||||||||| |||||||||||||||||| Sbjct: 122640 taaggccccttaatgaccgctcagtgata 122612 Score = 1207 bits (609), Expect = 0.0 Identities = 625/629 (99%), Gaps = 1/629 (0%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99498 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 99557 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99558 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 99617 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99618 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 99677 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 99678 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 99737 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99738 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 99797 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99798 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 99857 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99858 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 99917 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 99918 gcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtac 99976 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99977 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 100036 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100037 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 100096 Query: 613 taaggcccctaaatgaccgctcagtgata 641 |||||||||| |||||||||||||||||| Sbjct: 100097 taaggccccttaatgaccgctcagtgata 100125
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1207 bits (609), Expect = 0.0 Identities = 625/629 (99%), Gaps = 1/629 (0%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5851 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 5910 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5911 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 5970 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5971 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 6030 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 6031 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 6090 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6091 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 6150 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6151 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 6210 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6211 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 6270 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 6271 gcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtac 6329 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6330 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 6389 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6390 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 6449 Query: 613 taaggcccctaaatgaccgctcagtgata 641 |||||||||| |||||||||||||||||| Sbjct: 6450 taaggccccttaatgaccgctcagtgata 6478
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1207 bits (609), Expect = 0.0 Identities = 625/629 (99%), Gaps = 1/629 (0%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 498 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 558 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 618 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 619 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 678 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 679 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 738 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 798 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 799 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 858 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 859 gcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtac 917 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 918 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 977 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 978 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 1037 Query: 613 taaggcccctaaatgaccgctcagtgata 641 |||||||||| |||||||||||||||||| Sbjct: 1038 taaggccccttaatgaccgctcagtgata 1066
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1197 bits (604), Expect = 0.0 Identities = 607/608 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 435 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 494 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 495 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 554 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 614 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 615 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 674 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 734 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 794 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 854 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 914 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 915 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 974 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 1034 Query: 613 taaggccc 620 |||||||| Sbjct: 1035 taaggccc 1042
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 1150 bits (580), Expect = 0.0 Identities = 619/631 (98%), Gaps = 2/631 (0%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122781 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 122722 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122721 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 122662 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg-- 190 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 122661 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggtgactcataggcagtgtg 122602 Query: 191 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga 250 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 122601 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcga 122542 Query: 251 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122541 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 122482 Query: 311 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 370 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 122481 tgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggatgagttgtggtt 122422 Query: 371 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122421 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 122362 Query: 431 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122361 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 122302 Query: 491 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 550 ||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct: 122301 accaaattgaggcaaactctgaatactagatatgacccaaaaataataggattcaaagtc 122242 Query: 551 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 610 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 122241 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcacca 122182 Query: 611 gctaaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||| ||||| Sbjct: 122181 gctaaggcccctaaatgaccgctcaatgata 122151
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 1150 bits (580), Expect = 0.0 Identities = 619/631 (98%), Gaps = 2/631 (0%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825322 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 12825263 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825262 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 12825203 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg-- 190 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12825202 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggtgactcataggcagtgtg 12825143 Query: 191 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga 250 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 12825142 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcga 12825083 Query: 251 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825082 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 12825023 Query: 311 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 370 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825022 tgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggatgagttgtggtt 12824963 Query: 371 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824962 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 12824903 Query: 431 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824902 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 12824843 Query: 491 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 550 ||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct: 12824842 accaaattgaggcaaactctgaatactagatatgacccaaaaataataggattcaaagtc 12824783 Query: 551 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 610 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 12824782 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcacca 12824723 Query: 611 gctaaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||| ||||| Sbjct: 12824722 gctaaggcccctaaatgaccgctcaatgata 12824692
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1067 bits (538), Expect = 0.0 Identities = 544/546 (99%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 487 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 486 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 427 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 367 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 366 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 307 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 247 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 187 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 127 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 67 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 7 Query: 553 ccagtg 558 |||||| Sbjct: 6 ccagtg 1
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 1053 bits (531), Expect = 0.0 Identities = 605/629 (96%), Gaps = 8/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141672 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 141613 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 141612 cccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaagcagtgggagga 141556 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141555 gaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 141496 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 141495 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 141441 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 141440 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 141381 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141380 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 141321 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141320 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 141261 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 141260 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 141201 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 141200 caaatcgaggcaaactctgaatactagatatgaccccaaaataacaggggtaaaggtcgg 141141 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141140 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 141081 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 141080 taaggcccctaaatgaccgctcagtgata 141052 Score = 1053 bits (531), Expect = 0.0 Identities = 605/629 (96%), Gaps = 8/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111985 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 112044 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 112045 cccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaagcagtgggagga 112101 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112102 gaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 112161 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 112162 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 112216 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 112217 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 112276 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112277 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 112336 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112337 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 112396 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 112397 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 112456 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 112457 caaatcgaggcaaactctgaatactagatatgaccccaaaataacaggggtaaaggtcgg 112516 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112517 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112576 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 112577 taaggcccctaaatgaccgctcagtgata 112605
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 1045 bits (527), Expect = 0.0 Identities = 605/629 (96%), Gaps = 9/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133787 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 133728 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 133727 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 133671 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133670 gaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 133611 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 133610 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcgatt 133556 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 133555 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 133496 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133495 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 133436 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133435 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 133376 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 133375 gcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 133316 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 133315 caaatcgaggcaaactctgaatactagatatgacccaaaaatcaca-gggtcaaggtcgg 133257 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133256 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 133197 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 133196 taaggcccctaaatgaccgctcagtgata 133168 Score = 1045 bits (527), Expect = 0.0 Identities = 605/629 (96%), Gaps = 9/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104184 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 104243 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 104244 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 104300 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104301 gaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 104360 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 104361 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcgatt 104415 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 104416 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 104475 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104476 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 104535 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104536 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 104595 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 104596 gcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 104655 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 104656 caaatcgaggcaaactctgaatactagatatgacccaaaaatcaca-gggtcaaggtcgg 104714 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104715 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 104774 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 104775 taaggcccctaaatgaccgctcagtgata 104803
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 1027 bits (518), Expect = 0.0 Identities = 602/629 (95%), Gaps = 12/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127428 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 127369 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 127368 cccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaagcagtgggagga 127312 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127311 gaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 127252 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 127251 ttggttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttcatagggcgatt 127197 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 127196 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 127137 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127136 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 127077 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127076 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 127017 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 127016 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 126957 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 126956 caaatcgaggcaaactctgaatactagatatgacccca----aacaggggtcaaggtcgg 126901 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126900 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 126841 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 126840 taaggcccctaaatgaccgctcagtgata 126812 Score = 1027 bits (518), Expect = 0.0 Identities = 602/629 (95%), Gaps = 12/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107494 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 107553 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 107554 cccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaagcagtgggagga 107610 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107611 gaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 107670 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 107671 ttggttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttcatagggcgatt 107725 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 107726 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 107785 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107786 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 107845 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107846 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 107905 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 107906 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 107965 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 |||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 107966 caaatcgaggcaaactctgaatactagatatgacccca----aacaggggtcaaggtcgg 108021 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108022 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 108081 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 108082 taaggcccctaaatgaccgctcagtgata 108110
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 1023 bits (516), Expect = 0.0 Identities = 605/634 (95%), Gaps = 13/634 (2%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139150 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 139091 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 139090 cccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaagcagtgggagga 139034 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139033 gaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 138974 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| Sbjct: 138973 ttggttaagggaac-----ccaccggagccatagcgaaagcgagtcttcatagggcaatt 138919 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 138918 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 138859 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138858 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 138799 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138798 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 138739 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 138738 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 138679 Query: 493 caaatcgaggcaaactctgaatactagatatgaccc-----aaaaataacaggggtcaag 547 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 138678 caaatcgaggcaaactctgaatactagatatgaccccaaaacaaaataacaggggtcaag 138619 Query: 548 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 607 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138618 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 138559 Query: 608 ccagctaaggcccctaaatgaccgctcagtgata 641 |||||||||||||||||||||||||||||||||| Sbjct: 138558 ccagctaaggcccctaaatgaccgctcagtgata 138525 Score = 1023 bits (516), Expect = 0.0 Identities = 605/634 (95%), Gaps = 13/634 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110795 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 110854 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 110855 cccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaagcagtgggagga 110911 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110912 gaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 110971 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| Sbjct: 110972 ttggttaagggaac-----ccaccggagccatagcgaaagcgagtcttcatagggcaatt 111026 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 111027 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 111086 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111087 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 111146 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111147 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 111206 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 111207 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 111266 Query: 493 caaatcgaggcaaactctgaatactagatatgaccc-----aaaaataacaggggtcaag 547 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 111267 caaatcgaggcaaactctgaatactagatatgaccccaaaacaaaataacaggggtcaag 111326 Query: 548 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 607 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111327 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 111386 Query: 608 ccagctaaggcccctaaatgaccgctcagtgata 641 |||||||||||||||||||||||||||||||||| Sbjct: 111387 ccagctaaggcccctaaatgaccgctcagtgata 111420
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 999 bits (504), Expect = 0.0 Identities = 599/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 136501 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 136442 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 136441 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 136385 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136384 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 136327 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 136326 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 136272 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 136271 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 136212 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136211 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 136152 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136151 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 136092 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 136091 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 136032 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 136031 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 135972 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135971 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 135912 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 135911 taaggcccctaaatgaccgctcagtgata 135883 Score = 999 bits (504), Expect = 0.0 Identities = 599/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107056 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 107115 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 107116 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 107172 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107173 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 107230 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 107231 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 107285 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 107286 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 107345 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107346 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 107405 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107406 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 107465 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 107466 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 107525 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107526 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 107585 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107586 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 107645 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 107646 taaggcccctaaatgaccgctcagtgata 107674
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 999 bits (504), Expect = 0.0 Identities = 599/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135109 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135050 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 135049 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 134993 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134992 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 134935 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 134934 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 134880 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134879 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 134820 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134819 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 134760 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134759 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 134700 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 134699 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 134640 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134639 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 134580 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134579 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 134520 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 134519 taaggcccctaaatgaccgctcagtgata 134491 Score = 999 bits (504), Expect = 0.0 Identities = 599/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105927 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 105986 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 105987 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 106043 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106044 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106101 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106102 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 106156 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106157 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 106216 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106217 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 106276 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106277 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 106336 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 106337 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 106396 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106397 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 106456 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106457 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 106516 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 106517 taaggcccctaaatgaccgctcagtgata 106545
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 999 bits (504), Expect = 0.0 Identities = 599/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 136155 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 136096 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 136095 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 136039 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136038 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 135981 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 135980 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 135926 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135925 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 135866 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135865 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 135806 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135805 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 135746 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 135745 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 135686 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135685 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 135626 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135625 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 135566 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 135565 taaggcccctaaatgaccgctcagtgata 135537 Score = 999 bits (504), Expect = 0.0 Identities = 599/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106270 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106329 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 106330 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 106386 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106387 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106444 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106445 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 106499 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106500 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 106559 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106560 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 106619 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106620 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 106679 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 106680 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 106739 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106740 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 106799 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106800 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 106859 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 106860 taaggcccctaaatgaccgctcagtgata 106888
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 999 bits (504), Expect = 0.0 Identities = 599/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135244 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135185 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 135184 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 135128 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135127 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 135070 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 135069 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 135015 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135014 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 134955 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134954 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 134895 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134894 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 134835 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 134834 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 134775 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134774 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 134715 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134714 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 134655 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 134654 taaggcccctaaatgaccgctcagtgata 134626 Score = 999 bits (504), Expect = 0.0 Identities = 599/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106099 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106158 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 106159 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 106215 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106216 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106273 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106274 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 106328 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106329 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 106388 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106389 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 106448 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106449 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 106508 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 106509 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 106568 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106569 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 106628 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106629 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 106688 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 106689 taaggcccctaaatgaccgctcagtgata 106717
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 999 bits (504), Expect = 0.0 Identities = 599/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135242 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135183 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 135182 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 135126 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135125 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 135068 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 135067 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 135013 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135012 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 134953 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134952 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 134893 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134892 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 134833 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 134832 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 134773 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134772 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 134713 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134712 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 134653 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 134652 taaggcccctaaatgaccgctcagtgata 134624 Score = 999 bits (504), Expect = 0.0 Identities = 599/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106096 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106155 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 106156 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 106212 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106213 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106270 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106271 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 106325 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106326 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 106385 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106386 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 106445 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106446 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 106505 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 106506 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 106565 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106566 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 106625 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106626 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 106685 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 106686 taaggcccctaaatgaccgctcagtgata 106714
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 999 bits (504), Expect = 0.0 Identities = 599/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135154 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135095 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 135094 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 135038 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135037 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 134980 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 134979 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 134925 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134924 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 134865 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134864 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 134805 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134804 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 134745 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 134744 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 134685 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134684 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 134625 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134624 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 134565 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 134564 taaggcccctaaatgaccgctcagtgata 134536 Score = 999 bits (504), Expect = 0.0 Identities = 599/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105974 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106033 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 106034 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 106090 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106091 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106148 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106149 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 106203 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106204 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 106263 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106264 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 106323 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106324 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 106383 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 106384 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 106443 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106444 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 106503 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106504 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 106563 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 106564 taaggcccctaaatgaccgctcagtgata 106592
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 997 bits (503), Expect = 0.0 Identities = 599/629 (95%), Gaps = 9/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 131231 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 131172 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 131171 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 131115 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131114 gcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 131056 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 131055 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 131001 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 131000 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 130941 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130940 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 130881 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130880 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 130821 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 130820 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 130761 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130760 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 130701 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130700 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 130641 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 130640 taaggcccctaaatgaccgctcagtgata 130612 Score = 997 bits (503), Expect = 0.0 Identities = 599/629 (95%), Gaps = 9/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 103404 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 103463 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 103464 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 103520 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103521 gcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 103579 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 103580 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 103634 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 103635 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 103694 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103695 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 103754 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103755 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 103814 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 103815 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 103874 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 103875 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 103934 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103935 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 103994 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 103995 taaggcccctaaatgaccgctcagtgata 104023
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 991 bits (500), Expect = 0.0 Identities = 598/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135863 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135804 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 135803 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 135747 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135746 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 135689 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 135688 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 135634 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135633 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 135574 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135573 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 135514 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135513 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 135454 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 135453 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 135394 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135393 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 135334 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135333 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 135274 Query: 613 taaggcccctaaatgaccgctcagtgata 641 |||||||||||||||| |||||||||||| Sbjct: 135273 taaggcccctaaatgatcgctcagtgata 135245 Score = 991 bits (500), Expect = 0.0 Identities = 598/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106767 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106826 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 106827 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 106883 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106884 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106941 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106942 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 106996 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106997 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 107056 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107057 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 107116 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107117 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 107176 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 107177 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 107236 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107237 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 107296 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107297 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 107356 Query: 613 taaggcccctaaatgaccgctcagtgata 641 |||||||||||||||| |||||||||||| Sbjct: 107357 taaggcccctaaatgatcgctcagtgata 107385
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 991 bits (500), Expect = 0.0 Identities = 598/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1961 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 2020 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 2021 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 2077 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2078 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 2135 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 2136 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 2190 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2191 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 2250 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2251 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 2310 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2311 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 2370 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 2371 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 2430 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2431 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 2490 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2491 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 2550 Query: 613 taaggcccctaaatgaccgctcagtgata 641 |||||||||||||||| |||||||||||| Sbjct: 2551 taaggcccctaaatgatcgctcagtgata 2579
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 991 bits (500), Expect = 0.0 Identities = 598/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135861 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135802 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 135801 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 135745 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135744 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 135687 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 135686 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 135632 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135631 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 135572 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135571 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 135512 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135511 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 135452 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 135451 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 135392 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135391 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 135332 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135331 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 135272 Query: 613 taaggcccctaaatgaccgctcagtgata 641 |||||||||||||||| |||||||||||| Sbjct: 135271 taaggcccctaaatgatcgctcagtgata 135243 Score = 991 bits (500), Expect = 0.0 Identities = 598/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106765 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106824 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 106825 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 106881 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106882 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106939 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106940 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 106994 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106995 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 107054 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107055 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 107114 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107115 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 107174 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 107175 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 107234 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107235 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 107294 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107295 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 107354 Query: 613 taaggcccctaaatgaccgctcagtgata 641 |||||||||||||||| |||||||||||| Sbjct: 107355 taaggcccctaaatgatcgctcagtgata 107383
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 991 bits (500), Expect = 0.0 Identities = 598/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135592 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135533 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 135532 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 135476 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135475 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 135418 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 135417 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 135363 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135362 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 135303 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135302 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 135243 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135242 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 135183 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 135182 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 135123 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135122 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 135063 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135062 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 135003 Query: 613 taaggcccctaaatgaccgctcagtgata 641 |||||||||||||||| |||||||||||| Sbjct: 135002 taaggcccctaaatgatcgctcagtgata 134974 Score = 991 bits (500), Expect = 0.0 Identities = 598/629 (95%), Gaps = 10/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106546 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106605 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 106606 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 106662 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106663 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106720 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106721 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 106775 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106776 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 106835 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106836 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 106895 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106896 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 106955 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 106956 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 107015 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107016 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 107075 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107076 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 107135 Query: 613 taaggcccctaaatgaccgctcagtgata 641 |||||||||||||||| |||||||||||| Sbjct: 107136 taaggcccctaaatgatcgctcagtgata 107164
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 989 bits (499), Expect = 0.0 Identities = 598/629 (95%), Gaps = 9/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 132339 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 132280 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 132279 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 132223 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132222 gcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 132164 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 132163 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 132109 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 132108 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 132049 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132048 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 131989 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131988 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 131929 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 131928 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 131869 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 131868 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 131809 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131808 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 131749 Query: 613 taaggcccctaaatgaccgctcagtgata 641 |||||||||||||||| |||||||||||| Sbjct: 131748 taaggcccctaaatgatcgctcagtgata 131720 Score = 989 bits (499), Expect = 0.0 Identities = 598/629 (95%), Gaps = 9/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 104539 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 104598 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 104599 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 104655 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104656 gcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 104714 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 104715 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 104769 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 104770 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 104829 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104830 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 104889 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104890 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 104949 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 104950 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 105009 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 105010 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 105069 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105070 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 105129 Query: 613 taaggcccctaaatgaccgctcagtgata 641 |||||||||||||||| |||||||||||| Sbjct: 105130 taaggcccctaaatgatcgctcagtgata 105158
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 989 bits (499), Expect = 0.0 Identities = 598/629 (95%), Gaps = 9/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 131355 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 131296 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| ||||| ||||||||||||||| Sbjct: 131295 cccccatcggggagtgaaatagaacatgaaaccgta---agctctcaagcagtgggaggg 131239 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | | || | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131238 ggaccagacc-ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 131180 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 131179 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 131125 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 131124 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 131065 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131064 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 131005 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131004 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 130945 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 130944 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 130885 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 130884 caaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcgg 130825 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130824 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 130765 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 130764 taaggcccctaaatgaccgctcagtgata 130736 Score = 989 bits (499), Expect = 0.0 Identities = 598/629 (95%), Gaps = 9/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 102090 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 102149 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| ||||| ||||||||||||||| Sbjct: 102150 cccccatcggggagtgaaatagaacatgaaaccgta---agctctcaagcagtgggaggg 102206 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | | || | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102207 ggaccagacc-ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 102265 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 102266 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 102320 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 102321 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 102380 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102381 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 102440 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102441 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 102500 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 102501 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 102560 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 102561 caaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcgg 102620 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102621 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 102680 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 102681 taaggcccctaaatgaccgctcagtgata 102709
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 989 bits (499), Expect = 0.0 Identities = 598/629 (95%), Gaps = 9/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 132332 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 132273 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 132272 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 132216 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132215 gcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 132157 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 132156 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 132102 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 132101 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 132042 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132041 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 131982 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131981 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 131922 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 131921 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 131862 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 131861 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 131802 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131801 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 131742 Query: 613 taaggcccctaaatgaccgctcagtgata 641 |||||||||||||||| |||||||||||| Sbjct: 131741 taaggcccctaaatgatcgctcagtgata 131713 Score = 989 bits (499), Expect = 0.0 Identities = 598/629 (95%), Gaps = 9/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 104537 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 104596 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 104597 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 104653 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104654 gcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 104712 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 104713 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 104767 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 104768 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 104827 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104828 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 104887 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104888 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 104947 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 104948 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 105007 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 105008 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 105067 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105068 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 105127 Query: 613 taaggcccctaaatgaccgctcagtgata 641 |||||||||||||||| |||||||||||| Sbjct: 105128 taaggcccctaaatgatcgctcagtgata 105156
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 989 bits (499), Expect = 0.0 Identities = 598/629 (95%), Gaps = 9/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 437 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaa 496 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 497 cccccaccggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 553 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 554 gcctgggg-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 612 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 613 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 667 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 668 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 727 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 787 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 847 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 848 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 907 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 908 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 967 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 968 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 1027 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 1028 taaggcccctaaatgaccgctcagtgata 1056
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 983 bits (496), Expect = 0.0 Identities = 596/629 (94%), Gaps = 19/629 (3%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134545 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 134486 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 134485 cccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaagcagtgggagga 134429 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134428 gaaa----tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 134373 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 134372 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 134318 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134317 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 134258 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134257 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 134198 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134197 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 134138 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 134137 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 134078 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||| || ||| ||||||||||||| Sbjct: 134077 caaatcgaggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcgg 134025 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134024 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 133965 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 133964 taaggcccctaaatgaccgctcagtgata 133936 Score = 983 bits (496), Expect = 0.0 Identities = 596/629 (94%), Gaps = 19/629 (3%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105737 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 105796 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 105797 cccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaagcagtgggagga 105853 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105854 gaaa----tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 105909 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 105910 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 105964 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 105965 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 106024 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106025 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 106084 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106085 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 106144 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 106145 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 106204 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||| || ||| ||||||||||||| Sbjct: 106205 caaatcgaggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcgg 106257 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106258 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 106317 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 106318 taaggcccctaaatgaccgctcagtgata 106346
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 983 bits (496), Expect = 0.0 Identities = 597/629 (94%), Gaps = 10/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 142442 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 142383 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 142382 cccccatcggggagtgaaatagaacatgaaaccgtag---gctcccaagcagtgggagga 142326 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142325 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 142268 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 142267 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 142213 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142212 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 142153 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142152 aaactaagcggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 142093 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 142092 gggtgaaatgccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgca 142033 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 142032 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 141973 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 141972 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 141913 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 141912 ctagtgagacgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagc 141853 Query: 613 taaggcccctaaatgaccgctcagtgata 641 |||||||||||||||| |||||||||||| Sbjct: 141852 taaggcccctaaatgatcgctcagtgata 141824 Score = 983 bits (496), Expect = 0.0 Identities = 597/629 (94%), Gaps = 10/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 110886 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 110945 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 110946 cccccatcggggagtgaaatagaacatgaaaccgtag---gctcccaagcagtgggagga 111002 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111003 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 111060 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 111061 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 111115 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111116 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 111175 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111176 aaactaagcggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 111235 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 111236 gggtgaaatgccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgca 111295 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 111296 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 111355 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 111356 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 111415 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 111416 ctagtgagacgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagc 111475 Query: 613 taaggcccctaaatgaccgctcagtgata 641 |||||||||||||||| |||||||||||| Sbjct: 111476 taaggcccctaaatgatcgctcagtgata 111504
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 983 bits (496), Expect = 0.0 Identities = 597/629 (94%), Gaps = 10/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135121 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135062 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 135061 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 135005 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135004 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggc 134947 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 134946 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 134892 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134891 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 134832 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134831 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 134772 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134771 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 134712 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 134711 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 134652 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 134651 caaatcgaggcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcgg 134592 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134591 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 134532 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 134531 taaggcccctaaatgaccgctcagtgata 134503 Score = 983 bits (496), Expect = 0.0 Identities = 597/629 (94%), Gaps = 10/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105941 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106000 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 106001 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 106057 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106058 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggc 106115 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106116 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 106170 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106171 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 106230 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106231 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 106290 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106291 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 106350 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 106351 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 106410 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 106411 caaatcgaggcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcgg 106470 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106471 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 106530 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 106531 taaggcccctaaatgaccgctcagtgata 106559
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 977 bits (493), Expect = 0.0 Identities = 598/630 (94%), Gaps = 11/630 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 139068 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 139009 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 ||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 139008 cccccgtcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 138952 Query: 133 gaa-agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 191 | || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138951 gcccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 138894 Query: 192 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 251 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 138893 cttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaat 138839 Query: 252 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 138838 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggt 138779 Query: 312 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 371 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138778 gaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 138719 Query: 372 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138718 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 138659 Query: 432 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 138658 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggta 138599 Query: 492 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 551 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 138598 ccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcg 138539 Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138538 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 138479 Query: 612 ctaaggcccctaaatgaccgctcagtgata 641 |||||||||||||||||||||||||||||| Sbjct: 138478 ctaaggcccctaaatgaccgctcagtgata 138449 Score = 977 bits (493), Expect = 0.0 Identities = 598/630 (94%), Gaps = 11/630 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 110029 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 110088 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 ||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 110089 cccccgtcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 110145 Query: 133 gaa-agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 191 | || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110146 gcccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 110203 Query: 192 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 251 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 110204 cttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaat 110258 Query: 252 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 110259 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggt 110318 Query: 312 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 371 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110319 gaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 110378 Query: 372 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110379 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 110438 Query: 432 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 110439 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggta 110498 Query: 492 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 551 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 110499 ccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcg 110558 Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110559 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 110618 Query: 612 ctaaggcccctaaatgaccgctcagtgata 641 |||||||||||||||||||||||||||||| Sbjct: 110619 ctaaggcccctaaatgaccgctcagtgata 110648
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 973 bits (491), Expect = 0.0 Identities = 596/629 (94%), Gaps = 9/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 135465 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaa 135406 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 135405 cccccatcggggagtgaaatagaacatgaaaccgta---agcttccaagcagtgggagga 135349 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135348 gacgagga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 135290 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| Sbjct: 135289 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaatt 135235 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135234 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 135175 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135174 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 135115 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135114 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 135055 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 135054 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 134995 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 134994 caaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcgg 134935 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134934 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 134875 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 134874 taaggcccctaaatgaccgctcagtgata 134846 Score = 973 bits (491), Expect = 0.0 Identities = 596/629 (94%), Gaps = 9/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 106441 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaa 106500 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 106501 cccccatcggggagtgaaatagaacatgaaaccgta---agcttccaagcagtgggagga 106557 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106558 gacgagga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106616 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| Sbjct: 106617 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaatt 106671 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106672 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 106731 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106732 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 106791 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106792 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 106851 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 106852 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 106911 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 106912 caaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcgg 106971 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106972 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 107031 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 107032 taaggcccctaaatgaccgctcagtgata 107060
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 973 bits (491), Expect = 0.0 Identities = 596/629 (94%), Gaps = 9/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 135744 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaa 135685 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 135684 cccccatcggggagtgaaatagaacatgaaaccgta---agcttccaagcagtgggagga 135628 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135627 gacgagga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 135569 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| Sbjct: 135568 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaatt 135514 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135513 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 135454 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135453 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 135394 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135393 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 135334 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 135333 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 135274 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 135273 caaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcgg 135214 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135213 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 135154 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 135153 taaggcccctaaatgaccgctcagtgata 135125 Score = 973 bits (491), Expect = 0.0 Identities = 596/629 (94%), Gaps = 9/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 106663 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaa 106722 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 106723 cccccatcggggagtgaaatagaacatgaaaccgta---agcttccaagcagtgggagga 106779 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106780 gacgagga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106838 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| Sbjct: 106839 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaatt 106893 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106894 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 106953 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106954 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 107013 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107014 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 107073 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 107074 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 107133 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 107134 caaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcgg 107193 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107194 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 107253 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 107254 taaggcccctaaatgaccgctcagtgata 107282
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 971 bits (490), Expect = 0.0 Identities = 597/631 (94%), Gaps = 10/631 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 139276 ggctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaa 139217 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 139216 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 139160 Query: 133 ga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 190 || | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139159 gactactaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 139100 Query: 191 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga 250 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | Sbjct: 139099 gcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaa 139045 Query: 251 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 310 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139044 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggg 138985 Query: 311 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 370 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138984 tgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 138925 Query: 371 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138924 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 138865 Query: 431 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 490 |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 138864 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggt 138805 Query: 491 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 550 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 138804 accaaatcgaggcaaactctgaatactagatatgacctccaaataataggggtcaaggtc 138745 Query: 551 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 610 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138744 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 138685 Query: 611 gctaaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||||| Sbjct: 138684 gctaaggcccctaaatgaccgctcagtgata 138654 Score = 971 bits (490), Expect = 0.0 Identities = 597/631 (94%), Gaps = 10/631 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 110023 ggctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaa 110082 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 110083 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 110139 Query: 133 ga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 190 || | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110140 gactactaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 110199 Query: 191 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga 250 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | Sbjct: 110200 gcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaa 110254 Query: 251 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 310 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110255 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggg 110314 Query: 311 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 370 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110315 tgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 110374 Query: 371 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110375 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 110434 Query: 431 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 490 |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 110435 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggt 110494 Query: 491 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 550 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 110495 accaaatcgaggcaaactctgaatactagatatgacctccaaataataggggtcaaggtc 110554 Query: 551 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 610 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110555 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 110614 Query: 611 gctaaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||||| Sbjct: 110615 gctaaggcccctaaatgaccgctcagtgata 110645
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 965 bits (487), Expect = 0.0 Identities = 595/629 (94%), Gaps = 9/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 435 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 494 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 495 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 551 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 552 gccc-tgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 610 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 611 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 665 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 666 gtcactgcttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtg 725 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 726 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 785 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 786 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 845 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 846 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 905 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 906 caaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcgg 965 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 1025 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 1026 taaggcccctaaatgaccgctcagtgata 1054
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 965 bits (487), Expect = 0.0 Identities = 595/629 (94%), Gaps = 9/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 132562 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 132503 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 132502 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 132446 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132445 gccc-tgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 132387 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 132386 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 132332 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 132331 gtcactgcttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtg 132272 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 132271 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 132212 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132211 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 132152 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 132151 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 132092 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 132091 caaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcgg 132032 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132031 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 131972 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 131971 taaggcccctaaatgaccgctcagtgata 131943 Score = 965 bits (487), Expect = 0.0 Identities = 595/629 (94%), Gaps = 9/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 104202 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 104261 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 104262 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 104318 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104319 gccc-tgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 104377 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 104378 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 104432 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 104433 gtcactgcttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtg 104492 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 104493 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 104552 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104553 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 104612 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 104613 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 104672 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 104673 caaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcgg 104732 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104733 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 104792 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 104793 taaggcccctaaatgaccgctcagtgata 104821
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 965 bits (487), Expect = 0.0 Identities = 595/629 (94%), Gaps = 9/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 133523 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 133464 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 133463 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 133407 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133406 gccc-tgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 133348 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 133347 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 133293 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 133292 gtcactgcttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtg 133233 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 133232 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 133173 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133172 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 133113 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 133112 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 133053 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 133052 caaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcgg 132993 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132992 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 132933 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 132932 taaggcccctaaatgaccgctcagtgata 132904 Score = 965 bits (487), Expect = 0.0 Identities = 595/629 (94%), Gaps = 9/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105126 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 105185 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 105186 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 105242 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105243 gccc-tgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 105301 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 105302 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 105356 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 105357 gtcactgcttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtg 105416 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 105417 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 105476 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105477 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 105536 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 105537 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 105596 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 105597 caaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcgg 105656 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105657 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 105716 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 105717 taaggcccctaaatgaccgctcagtgata 105745
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 963 bits (486), Expect = 0.0 Identities = 595/629 (94%), Gaps = 13/629 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 537 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 596 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||| | ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 597 cccc-atcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggc 652 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 653 caggg----ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 708 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 709 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 763 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 764 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 823 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 883 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 943 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 944 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 1003 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1004 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcgg 1063 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1064 ctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 1123 Query: 613 taaggcccctaaatgaccgctcagtgata 641 |||||||||||||||| |||||||||||| Sbjct: 1124 taaggcccctaaatgatcgctcagtgata 1152
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 959 bits (484), Expect = 0.0 Identities = 596/630 (94%), Gaps = 10/630 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 131432 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaa 131373 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg- 131 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 131372 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 131316 Query: 132 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 191 || | || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131315 ggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 131257 Query: 192 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 251 |||||||||||||| ||||||||||||||||||||||||||||| | ||||| || Sbjct: 131256 cttggttaagggaaa-----ccaccggagccgtagcgaaagcgagtcttcacagggcaat 131202 Query: 252 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 131201 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggt 131142 Query: 312 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 371 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131141 gaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 131082 Query: 372 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131081 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 131022 Query: 432 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 ||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 131021 agcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggta 130962 Query: 492 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 551 |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 130961 ccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcg 130902 Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130901 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 130842 Query: 612 ctaaggcccctaaatgaccgctcagtgata 641 |||||||||||||||||||||||||||||| Sbjct: 130841 ctaaggcccctaaatgaccgctcagtgata 130812 Score = 959 bits (484), Expect = 0.0 Identities = 596/630 (94%), Gaps = 10/630 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 103962 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaa 104021 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg- 131 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 104022 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 104078 Query: 132 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 191 || | || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104079 ggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 104137 Query: 192 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 251 |||||||||||||| ||||||||||||||||||||||||||||| | ||||| || Sbjct: 104138 cttggttaagggaaa-----ccaccggagccgtagcgaaagcgagtcttcacagggcaat 104192 Query: 252 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104193 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggt 104252 Query: 312 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 371 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104253 gaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 104312 Query: 372 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104313 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 104372 Query: 432 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 ||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 104373 agcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggta 104432 Query: 492 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 551 |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 104433 ccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcg 104492 Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104493 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 104552 Query: 612 ctaaggcccctaaatgaccgctcagtgata 641 |||||||||||||||||||||||||||||| Sbjct: 104553 ctaaggcccctaaatgaccgctcagtgata 104582
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 957 bits (483), Expect = 0.0 Identities = 594/629 (94%), Gaps = 9/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 444 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 503 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 504 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 560 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 gcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 619 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| Sbjct: 620 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaatt 674 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 675 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatggagcttgggtg 734 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 794 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 854 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 855 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 914 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 915 caaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcgg 974 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 ccagtgagacaatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 1034 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||| ||||| Sbjct: 1035 taaggcccctaaatgaccgctcaatgata 1063
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 955 bits (482), Expect = 0.0 Identities = 598/631 (94%), Gaps = 13/631 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2205 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 2264 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 2265 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 2321 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2322 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 2379 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 2380 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 2434 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2435 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 2494 Query: 313 aaactaagcagagg-tccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 371 |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2495 aaactaagtggagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 2554 Query: 372 ggggtgaaatg-ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2555 ggggtgaaatggccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 2614 Query: 431 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 490 |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 2615 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggt 2674 Query: 491 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 550 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 2675 accaaatcgaggcaaactctgaatactagatatgactc-aaaataacaggggtcaaggtc 2733 Query: 551 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 610 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2734 ggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagtccggatcacca 2793 Query: 611 gctaaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||||| Sbjct: 2794 gctaaggcccctaaatgaccgctcagtgata 2824
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 946 bits (477), Expect = 0.0 Identities = 592/629 (94%), Gaps = 11/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 444 ggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaa 503 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||| ||| ||||||||| ||||| |||||||||||||| Sbjct: 504 cccccatcggggagtgaaataaaacatgaaaccgta---agctctcaagcagtgggagga 560 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 || || |||||| ||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 561 gacagg---ctctgaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggc 617 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 618 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 672 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 673 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 732 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 733 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 792 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 793 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 852 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 853 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 912 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 913 caaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcgg 972 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 973 ccagtgagacgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagc 1032 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 1033 taaggcccctaaatgaccgctcagtgata 1061
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 944 bits (476), Expect = 0.0 Identities = 479/480 (99%) Strand = Plus / Plus Query: 162 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 222 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 281 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 282 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 342 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 241 Query: 402 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 301 Query: 462 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 361 Query: 522 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 421 Query: 582 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 641 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 481
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 942 bits (475), Expect = 0.0 Identities = 595/631 (94%), Gaps = 13/631 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtacc-gtgagggaaaggtgaaaaga 71 |||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||| Sbjct: 932 ggctaaatactcctgggtgaccgatagccaaatagtacccgtgagggaaaggtgaaaaga 991 Query: 72 acccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 131 ||||||| ||| ||||||||||||| ||||||||| ||||| |||||||||||||| Sbjct: 992 acccccatcggggagtgaaatagaacatgaaaccgta---agctctcaagcagtgggagg 1048 Query: 132 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 191 || || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1049 agacagg---ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 1105 Query: 192 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 251 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 1106 cttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaat 1160 Query: 252 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1161 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggt 1220 Query: 312 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 371 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1221 gaaactaagtgagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 1280 Query: 372 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1281 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 1340 Query: 432 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 1341 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggta 1400 Query: 492 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 551 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1401 ccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcg 1460 Query: 552 gccagtgagacgat-gggggataagcttcatcgtcgagagggaaacagcccggatcacca 610 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1461 gccagtgagacgatggggggataagcttcatcgtcgagagggaaacagcccggatcacca 1520 Query: 611 gctaaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||||| Sbjct: 1521 gctaaggcccctaaatgaccgctcagtgata 1551
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 942 bits (475), Expect = 0.0 Identities = 478/479 (99%) Strand = Plus / Plus Query: 163 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 223 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 282 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 283 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 180 Query: 343 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 240 Query: 403 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 300 Query: 463 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 360 Query: 523 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 420 Query: 583 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 479
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 922 bits (465), Expect = 0.0 Identities = 589/629 (93%), Gaps = 16/629 (2%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 139924 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 139865 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| || ||||||||||||||||| Sbjct: 139864 cccccatcggggagtgaaatagaacatgaaaccgta---agttcccaagcagtgggagga 139808 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 || | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139807 gacggggg-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 139749 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 139748 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 139694 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 139693 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 139634 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139633 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 139574 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139573 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 139514 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 || ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 139513 gcggttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 139454 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||| || || |||| |||||||||||| Sbjct: 139453 caaatcgaggcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcgg 139401 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139400 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 139341 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 139340 taaggcccctaaatgaccgctcagtgata 139312 Score = 922 bits (465), Expect = 0.0 Identities = 589/629 (93%), Gaps = 16/629 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 110136 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 110195 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| || ||||||||||||||||| Sbjct: 110196 cccccatcggggagtgaaatagaacatgaaaccgta---agttcccaagcagtgggagga 110252 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 || | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110253 gacggggg-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 110311 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 110312 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 110366 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 110367 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 110426 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110427 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 110486 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110487 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 110546 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 || ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 110547 gcggttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtac 110606 Query: 493 caaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcgg 552 ||||||||||||||||||||||||||||| || || |||| |||||||||||| Sbjct: 110607 caaatcgaggcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcgg 110659 Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110660 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 110719 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||| Sbjct: 110720 taaggcccctaaatgaccgctcagtgata 110748
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 900 bits (454), Expect = 0.0 Identities = 587/628 (93%), Gaps = 10/628 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 496 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 497 cccccataggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 553 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 554 gaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 613 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| Sbjct: 614 ctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaatt 668 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 669 gtcactacttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 728 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 729 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 788 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 848 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 849 gcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggta 908 Query: 492 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg-tcaaggtc 550 |||||||||||||||||||||||||||||||||| || |||||||||||| | |||||| Sbjct: 909 ccaaatcgaggcaaactctgaatactagatatgatccccaaataacaggggataaaggtc 968 Query: 551 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 610 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 969 aaccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcacca 1028 Query: 611 gctaaggcccctaaatgaccgctcagtg 638 |||||||||||||||||||||||||||| Sbjct: 1029 gctaaggcccctaaatgaccgctcagtg 1056
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 898 bits (453), Expect = 0.0 Identities = 588/630 (93%), Gaps = 11/630 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||| Sbjct: 52249 ggctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaa 52190 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| |||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 52189 cccccattggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 52133 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 52132 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggc 52075 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||| |||||||||||||| || ||||||| ||| Sbjct: 52074 ttggttaagggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaatt 52020 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 52019 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 51960 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51959 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 51900 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51899 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 51840 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 ||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||| Sbjct: 51839 gcagttgactggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtac 51780 Query: 493 caaatcgaggcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcg 551 |||||||| |||||||||||||||||| |||||||| | |||||| |||||| ||||||| Sbjct: 51779 caaatcgaagcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcg 51720 Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51719 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 51660 Query: 612 ctaaggcccctaaatgaccgctcagtgata 641 ||||||||||||| ||| |||||||||||| Sbjct: 51659 ctaaggcccctaattgatcgctcagtgata 51630 Score = 898 bits (453), Expect = 0.0 Identities = 588/630 (93%), Gaps = 11/630 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||| Sbjct: 37579 ggctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaa 37638 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| |||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 37639 cccccattggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 37695 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 37696 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggc 37753 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||| |||||||||||||| || ||||||| ||| Sbjct: 37754 ttggttaagggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaatt 37808 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 37809 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 37868 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37869 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 37928 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37929 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 37988 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 ||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||| Sbjct: 37989 gcagttgactggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtac 38048 Query: 493 caaatcgaggcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcg 551 |||||||| |||||||||||||||||| |||||||| | |||||| |||||| ||||||| Sbjct: 38049 caaatcgaagcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcg 38108 Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38109 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 38168 Query: 612 ctaaggcccctaaatgaccgctcagtgata 641 ||||||||||||| ||| |||||||||||| Sbjct: 38169 ctaaggcccctaattgatcgctcagtgata 38198
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 898 bits (453), Expect = 0.0 Identities = 588/630 (93%), Gaps = 11/630 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||| Sbjct: 4507 ggctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaa 4566 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| |||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 4567 cccccattggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 4623 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4624 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggc 4681 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||| |||||||||||||| || ||||||| ||| Sbjct: 4682 ttggttaagggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaatt 4736 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4737 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 4796 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4797 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 4856 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4857 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 4916 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 ||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||| Sbjct: 4917 gcagttgactggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtac 4976 Query: 493 caaatcgaggcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcg 551 |||||||| |||||||||||||||||| |||||||| | |||||| |||||| ||||||| Sbjct: 4977 caaatcgaagcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcg 5036 Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5037 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 5096 Query: 612 ctaaggcccctaaatgaccgctcagtgata 641 ||||||||||||| ||| |||||||||||| Sbjct: 5097 ctaaggcccctaattgatcgctcagtgata 5126
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 882 bits (445), Expect = 0.0 Identities = 586/629 (93%), Gaps = 13/629 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86700 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 86759 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 86760 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 86816 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 86817 aaattagatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 86876 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| |||||||||||||||||| |||||||||| || |||| ||| Sbjct: 86877 ttggttaagggaac-----ccaccggagccgtagcgagagcgagtcttcatggggcaatt 86931 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 86932 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 86991 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 86992 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 87051 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87052 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 87111 Query: 433 gcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 ||||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||| Sbjct: 87112 gcagttgactggaccatctaggggtaaagcactgtttcggtacgggccgcgagagcggta 87171 Query: 492 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 551 |||||||||||||||||||||||||||||| || ||| ||||| |||||| | |||| Sbjct: 87172 ccaaatcgaggcaaactctgaatactagat-tgcccc---aataaaaggggtaagggtca 87227 Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 87228 accagtgagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccag 87287 Query: 612 ctaaggcccctaaatgaccgctcagtgat 640 ||||||||||||||||||||||||||||| Sbjct: 87288 ctaaggcccctaaatgaccgctcagtgat 87316
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 860 bits (434), Expect = 0.0 Identities = 582/628 (92%), Gaps = 10/628 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 496 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 497 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 553 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 554 gaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 613 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||| || ||||||||||||||||||||||||||||| | |||| ||| Sbjct: 614 ctggttaaggggac-----ccaccggagccgtagcgaaagcgagtcttcctggggcaatt 668 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 669 gtcactacttatggacccgaacctgggtgatctatccatgaccaggatgaagctcgggtg 728 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 729 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 788 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 848 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 849 gcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggta 908 Query: 492 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg-tcaaggtc 550 |||||||||||||||||||||||||||||||||| | |||||| |||| | | |||| Sbjct: 909 ccaaatcgaggcaaactctgaatactagatatgatctccgaataacgggggataagggtc 968 Query: 551 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 610 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 969 aaccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcacca 1028 Query: 611 gctaaggcccctaaatgaccgctcagtg 638 |||||||||||||||||||||||||||| Sbjct: 1029 gctaaggcccctaaatgaccgctcagtg 1056
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 860 bits (434), Expect = 0.0 Identities = 582/628 (92%), Gaps = 10/628 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 117712 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaa 117653 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 117652 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 117596 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 117595 gaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 117536 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| Sbjct: 117535 ctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaatt 117481 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct: 117480 gtcactacttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtg 117421 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 117420 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 117361 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117360 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 117301 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 117300 gcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggta 117241 Query: 492 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtc 550 |||||||||||||||||||||||||||||||||| || |||||| | ||||| | |||| Sbjct: 117240 ccaaatcgaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtc 117181 Query: 551 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 610 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 117180 aaccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcacca 117121 Query: 611 gctaaggcccctaaatgaccgctcagtg 638 ||||||||||||||||||||||| |||| Sbjct: 117120 gctaaggcccctaaatgaccgctaagtg 117093 Score = 860 bits (434), Expect = 0.0 Identities = 582/628 (92%), Gaps = 10/628 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 90390 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaa 90449 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 90450 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 90506 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 90507 gaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 90566 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| Sbjct: 90567 ctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaatt 90621 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct: 90622 gtcactacttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtg 90681 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 90682 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 90741 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90742 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 90801 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 90802 gcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggta 90861 Query: 492 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtc 550 |||||||||||||||||||||||||||||||||| || |||||| | ||||| | |||| Sbjct: 90862 ccaaatcgaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtc 90921 Query: 551 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 610 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 90922 aaccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcacca 90981 Query: 611 gctaaggcccctaaatgaccgctcagtg 638 ||||||||||||||||||||||| |||| Sbjct: 90982 gctaaggcccctaaatgaccgctaagtg 91009
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 858 bits (433), Expect = 0.0 Identities = 584/630 (92%), Gaps = 12/630 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||| Sbjct: 437 ggctaaatactcctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa 496 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||| | |||| ||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 497 cccc-attggggagtgaaatagaacatgaaaccgta---agctaccaagcagtgggagga 552 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 553 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggc 610 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||| |||||||||||||| || ||||| | ||| Sbjct: 611 ttggttaagggaac-----ccaccggagccatagcgaaagcgagtattcataggactatt 665 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 666 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctttggtg 725 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 726 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 785 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 786 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 845 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 ||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||| Sbjct: 846 gcagttgactggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtac 905 Query: 493 caaatcgaggcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcg 551 |||||||| |||||||||||||||||| |||||||| ||||||||||||||| ||||||| Sbjct: 906 caaatcgaagcaaactctgaatactagaatatgacctaaaaataacaggggtaaaggtcg 965 Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 966 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccag 1025 Query: 612 ctaaggcccctaaatgaccgctcagtgata 641 ||||||||||||| ||| |||||||||||| Sbjct: 1026 ctaaggcccctaattgatcgctcagtgata 1055
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 856 bits (432), Expect = 0.0 Identities = 583/629 (92%), Gaps = 12/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88786 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 88845 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 88846 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 88902 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 88903 aaattagatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 88962 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| |||||||||||||||||| |||||||||| || |||| ||| Sbjct: 88963 ttggttaagggaac-----ccaccggagccgtagcgagagcgagtcttcatggggcaatt 89017 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 89018 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 89077 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 89078 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 89137 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89138 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 89197 Query: 433 gcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 ||||||||||||| ||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 89198 gcagttgactggaccatctaggggtaaagcactgtttcggtacgggccacgagagcggta 89257 Query: 492 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 551 |||||||||||||||||||||||||||||| | ||||| | || ||||| | |||| Sbjct: 89258 ccaaatcgaggcaaactctgaatactagat-taccccaata--aaagggggtaagggtca 89314 Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 89315 accagtgagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccag 89374 Query: 612 ctaaggcccctaaatgaccgctcagtgat 640 ||||||||||||||||||||||||||||| Sbjct: 89375 ctaaggcccctaaatgaccgctcagtgat 89403
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 852 bits (430), Expect = 0.0 Identities = 586/633 (92%), Gaps = 15/633 (2%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 146122 ggctaaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaa 146063 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 ||||| ||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 146062 cccccgtcggggagtgaaatagaacatgaaaccgtag---gctcccaagcagtgggagga 146006 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 146005 gaatcggatccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 145946 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| Sbjct: 145945 ctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaatt 145891 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 145890 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 145831 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 145830 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 145771 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145770 gggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 145711 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 145710 gcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggta 145651 Query: 492 ccaaatcgaggcaaactctgaatactagatatga--cccaa---aaataacagg-ggtca 545 |||||||||||||||||||||||||||| ||||| |||| ||| |||||| ||| | Sbjct: 145650 ccaaatcgaggcaaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaa 145591 Query: 546 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 605 ||||| |||||||||||| |||||||||||||||||||||||||||| |||||||| ||| Sbjct: 145590 aggtcagccagtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagat 145531 Query: 606 caccagctaaggcccctaaatgaccgctcagtg 638 ||||||||||||||||||||||||||||||||| Sbjct: 145530 caccagctaaggcccctaaatgaccgctcagtg 145498 Score = 852 bits (430), Expect = 0.0 Identities = 586/633 (92%), Gaps = 15/633 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 112340 ggctaaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaa 112399 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 ||||| ||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 112400 cccccgtcggggagtgaaatagaacatgaaaccgtag---gctcccaagcagtgggagga 112456 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 112457 gaatcggatccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 112516 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| Sbjct: 112517 ctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaatt 112571 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 112572 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 112631 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 112632 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 112691 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112692 gggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 112751 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 112752 gcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggta 112811 Query: 492 ccaaatcgaggcaaactctgaatactagatatga--cccaa---aaataacagg-ggtca 545 |||||||||||||||||||||||||||| ||||| |||| ||| |||||| ||| | Sbjct: 112812 ccaaatcgaggcaaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaa 112871 Query: 546 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 605 ||||| |||||||||||| |||||||||||||||||||||||||||| |||||||| ||| Sbjct: 112872 aggtcagccagtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagat 112931 Query: 606 caccagctaaggcccctaaatgaccgctcagtg 638 ||||||||||||||||||||||||||||||||| Sbjct: 112932 caccagctaaggcccctaaatgaccgctcagtg 112964
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 825 bits (416), Expect = 0.0 Identities = 479/500 (95%), Gaps = 5/500 (1%) Strand = Plus / Minus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 129795 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129794 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 129735 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129734 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 129675 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 129674 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 129615 Query: 502 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 561 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 129614 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 129555 Query: 562 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 621 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 129554 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccc 129495 Query: 622 taaatgaccgctcagtgata 641 |||||||||||||||||||| Sbjct: 129494 taaatgaccgctcagtgata 129475 Score = 825 bits (416), Expect = 0.0 Identities = 479/500 (95%), Gaps = 5/500 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 102661 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102662 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 102721 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102722 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 102781 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 102782 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 102841 Query: 502 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 561 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 102842 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 102901 Query: 562 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 621 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 102902 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccc 102961 Query: 622 taaatgaccgctcagtgata 641 |||||||||||||||||||| Sbjct: 102962 taaatgaccgctcagtgata 102981 Score = 153 bits (77), Expect = 8e-34 Identities = 109/119 (91%), Gaps = 3/119 (2%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 130099 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaa 130040 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 131 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 130039 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 153 bits (77), Expect = 8e-34 Identities = 109/119 (91%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 102357 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaa 102416 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 131 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 102417 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 102472
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 821 bits (414), Expect = 0.0 Identities = 577/628 (91%), Gaps = 10/628 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 500 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 501 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 557 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 558 gaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 617 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||||||||||||||||||| |||||| | |||| ||| Sbjct: 618 ctggttaagggaac-----ccaccggagccgtagcgaaagcaagtcttcctggggcaatt 672 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 673 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 732 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 733 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 792 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 793 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 852 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 |||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 853 gcagttgactagactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggta 912 Query: 492 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag-gggtcaaggtc 550 |||||||||||||||||||||||||| |||| ||| | ||||| || | || | |||| Sbjct: 913 ccaaatcgaggcaaactctgaatactggataggactccctaataatagagagtaagggtc 972 Query: 551 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 610 |||||||||| ||||||||||||||||| |||||||||| |||||||| ||||||| Sbjct: 973 aaccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatcaccg 1032 Query: 611 gctaaggcccctaaatgaccgctcagtg 638 ||||||||||||||||||||||| |||| Sbjct: 1033 gctaaggcccctaaatgaccgctaagtg 1060
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 819 bits (413), Expect = 0.0 Identities = 575/627 (91%), Gaps = 9/627 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 128004 ggctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaa 127945 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 127944 cccccataggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 127888 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 127887 gaattggatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggc 127828 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| Sbjct: 127827 ctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaatt 127773 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 127772 gtcactgctcatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggta 127713 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 127712 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 127653 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127652 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 127593 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 ||||||||| |||| | |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 127592 gcagttgaccggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggta 127533 Query: 492 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 551 |||||||||||||||||||||||||||| |||||||| || ||| ||| | |||| Sbjct: 127532 ccaaatcgaggcaaactctgaatactaggtatgacccccgaagaacggggaaaagggtca 127473 Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 ||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||| Sbjct: 127472 accagtgagacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccag 127413 Query: 612 ctaaggcccctaaatgaccgctcagtg 638 |||||||||||||||||| |||||||| Sbjct: 127412 ctaaggcccctaaatgactgctcagtg 127386 Score = 819 bits (413), Expect = 0.0 Identities = 575/627 (91%), Gaps = 9/627 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 95443 ggctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaa 95502 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 95503 cccccataggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 95559 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 95560 gaattggatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggc 95619 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| Sbjct: 95620 ctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaatt 95674 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 95675 gtcactgctcatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggta 95734 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 95735 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 95794 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95795 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 95854 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 ||||||||| |||| | |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95855 gcagttgaccggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggta 95914 Query: 492 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 551 |||||||||||||||||||||||||||| |||||||| || ||| ||| | |||| Sbjct: 95915 ccaaatcgaggcaaactctgaatactaggtatgacccccgaagaacggggaaaagggtca 95974 Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 ||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||| Sbjct: 95975 accagtgagacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccag 96034 Query: 612 ctaaggcccctaaatgaccgctcagtg 638 |||||||||||||||||| |||||||| Sbjct: 96035 ctaaggcccctaaatgactgctcagtg 96061
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 807 bits (407), Expect = 0.0 Identities = 478/500 (95%), Gaps = 5/500 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 935 Query: 502 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 561 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 936 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 995 Query: 562 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 621 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 996 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1055 Query: 622 taaatgaccgctcagtgata 641 |||||||||||||||||||| Sbjct: 1056 taaatgaccgctcagtgata 1075 Score = 145 bits (73), Expect = 2e-31 Identities = 108/119 (90%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 444 ggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaa 503 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 131 |||||| || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 504 cccccatccgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 805 bits (406), Expect = 0.0 Identities = 476/500 (95%), Gaps = 12/500 (2%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 220 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 280 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 281 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 340 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 341 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 400 Query: 502 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 561 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 401 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 453 Query: 562 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 621 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 513 Query: 622 taaatgaccgctcagtgata 641 |||||||||||||||||||| Sbjct: 514 taaatgaccgctcagtgata 533
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 797 bits (402), Expect = 0.0 Identities = 475/500 (95%), Gaps = 12/500 (2%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 236 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 296 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 297 gccgctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 356 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 357 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 416 Query: 502 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 561 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 417 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 469 Query: 562 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 621 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 529 Query: 622 taaatgaccgctcagtgata 641 |||||||||||||||||||| Sbjct: 530 taaatgaccgctcagtgata 549
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 795 bits (401), Expect = 0.0 Identities = 478/501 (95%), Gaps = 7/501 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 202 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 260 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 261 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 320 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 321 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 814 Query: 381 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 874 Query: 441 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 500 ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 875 ctggacatctaagggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 934 Query: 501 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 560 |||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 935 ggcaaactctgaatactaaatatgacctcaaaataacaggggttaaggtcggccagtgag 994 Query: 561 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 620 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 995 acgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggccc 1054 Query: 621 ctaaatgaccgctcagtgata 641 ||||||||||||||||||||| Sbjct: 1055 ctaaatgaccgctcagtgata 1075 Score = 153 bits (77), Expect = 8e-34 Identities = 109/119 (91%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 444 ggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaa 503 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 131 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 504 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 795 bits (401), Expect = 0.0 Identities = 478/501 (95%), Gaps = 7/501 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 177579 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 177580 ggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtgaaat 177638 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177639 gccactcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 177698 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| Sbjct: 177699 tggacatctaggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcgag 177758 Query: 502 gcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtgag 560 |||||||||||||||||||||||||| ||||||| | |||| |||||||||| |||||| Sbjct: 177759 gcaaactctgaatactagatatgacctcaaaataagaggggggcaaggtcggctagtgag 177818 Query: 561 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 620 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 177819 acgatgggggataagcttcatcgtcgagagggaaagagcccggatcaccagctaaggccc 177878 Query: 621 ctaaatgaccgctcagtgata 641 ||||||||||||||||||||| Sbjct: 177879 ctaaatgaccgctcagtgata 177899 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 30 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 75 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 30 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 75 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 615 aggcccctaaatgaccgctcag 636 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 583 gtcgagagggaaacagcccggatc 606 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 583 gtcgagagggaaacagcccggatc 606 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 793 bits (400), Expect = 0.0 Identities = 476/500 (95%), Gaps = 6/500 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 754 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 814 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 874 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 875 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 934 Query: 502 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 561 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 935 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 994 Query: 562 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 621 | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 995 ccatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccc 1054 Query: 622 taaatgaccgctcagtgata 641 |||||||||||||||||||| Sbjct: 1055 taaatgaccgctcagtgata 1074 Score = 145 bits (73), Expect = 2e-31 Identities = 108/119 (90%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 444 ggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaa 503 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 131 |||||| ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 504 cccccatcggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 789 bits (398), Expect = 0.0 Identities = 449/466 (96%), Gaps = 5/466 (1%) Strand = Plus / Plus Query: 176 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 235 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 236 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 295 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 296 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 355 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 766 Query: 356 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 826 Query: 416 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 886 Query: 476 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaata 535 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 887 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaata 946 Query: 536 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 595 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 acaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 1006 Query: 596 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 641 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1007 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 1052 Score = 145 bits (73), Expect = 2e-31 Identities = 108/119 (90%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 444 ggctaaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaa 503 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 131 |||||| ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 504 cccccatcggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 775 bits (391), Expect = 0.0 Identities = 424/435 (97%) Strand = Plus / Plus Query: 207 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 266 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 267 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 326 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 327 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 781 Query: 387 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 841 Query: 447 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 506 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 842 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 901 Query: 507 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 566 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 902 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 961 Query: 567 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1021 Query: 627 gaccgctcagtgata 641 |||||| |||||||| Sbjct: 1022 gaccgcccagtgata 1036 Score = 133 bits (67), Expect = 8e-28 Identities = 112/125 (89%), Gaps = 4/125 (3%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 444 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 503 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 ||||| ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| Sbjct: 504 -ccccatcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggagga 559 Query: 133 gaaag 137 ||||| Sbjct: 560 gaaag 564
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 771 bits (389), Expect = 0.0 Identities = 472/500 (94%), Gaps = 11/500 (2%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgag 935 Query: 502 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 561 |||||||||||||||||||||||||| | |||||||| ||||||||||| ||||| Sbjct: 936 gcaaactctgaatactagatatgacc------tcacaggggttaaggtcggccaatgaga 989 Query: 562 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 621 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 990 cgatgggggataagcttcatcttccagagggaaacagcccggatcaccagctaaggcccc 1049 Query: 622 taaatgaccgctcagtgata 641 |||||||||||||||||||| Sbjct: 1050 taaatgaccgctcagtgata 1069 Score = 145 bits (73), Expect = 2e-31 Identities = 108/119 (90%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 444 ggctaaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaa 503 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 131 |||||| || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 504 cccccatccgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 757 bits (382), Expect = 0.0 Identities = 478/508 (94%), Gaps = 9/508 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115774 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 115715 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 115714 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 115658 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 115657 gaattgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 115598 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||| | ||||||||||||||||||||||||||||| |||||| ||| Sbjct: 115597 ctggttaagggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaatt 115543 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 115542 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 115483 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 115482 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 115423 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115422 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 115363 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 115362 gcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggta 115303 Query: 492 ccaaatcgaggcaaactctgaatactag 519 |||||||||||||||||||||||||||| Sbjct: 115302 ccaaatcgaggcaaactctgaatactag 115275 Score = 757 bits (382), Expect = 0.0 Identities = 478/508 (94%), Gaps = 9/508 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86346 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 86405 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 86406 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 86462 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 86463 gaattgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 86522 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||| | ||||||||||||||||||||||||||||| |||||| ||| Sbjct: 86523 ctggttaagggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaatt 86577 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 86578 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 86637 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 86638 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 86697 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86698 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 86757 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 86758 gcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggta 86817 Query: 492 ccaaatcgaggcaaactctgaatactag 519 |||||||||||||||||||||||||||| Sbjct: 86818 ccaaatcgaggcaaactctgaatactag 86845 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 547 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 606 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 607 accagctaaggcccctaaatgaccgctcagtg 638 |||||||||||||||||||||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtg 115155 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 547 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 606 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 607 accagctaaggcccctaaatgaccgctcagtg 638 |||||||||||||||||||||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtg 86965
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 749 bits (378), Expect = 0.0 Identities = 478/508 (94%), Gaps = 10/508 (1%) Strand = Plus / Plus Query: 85 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 144 ||||||||||||| ||||||||| |||||||||||||||||||| | || ||| Sbjct: 364690 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctc 364745 Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364746 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 364805 Query: 205 acggaacccaccggagccgtagcgaaag-cgagtcttaatagggcgattgtcactgctta 263 || ||||||||||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 364806 ac-----ccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgctta 364860 Query: 264 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 323 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | Sbjct: 364861 tggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtgg 364920 Query: 324 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 383 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 364921 aggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgc 364980 Query: 384 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364981 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 365040 Query: 444 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 503 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 365041 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 365100 Query: 504 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 563 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 365101 aaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacg 365160 Query: 564 atgggggataagcttcatcgtcgagagg 591 ||||||||||||||||||||||||||| Sbjct: 365161 gtgggggataagcttcatcgtcgagagg 365188 Score = 87.7 bits (44), Expect = 4e-14 Identities = 50/52 (96%) Strand = Plus / Minus Query: 586 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 637 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagt 129296 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 30 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 75 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 11520 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 11475 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 583 gtcgagagggaaacagcccggatc 606 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 747 bits (377), Expect = 0.0 Identities = 422/437 (96%), Gaps = 5/437 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 46992 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46993 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 47052 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47053 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 47112 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 47113 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 47172 Query: 502 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 561 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 47173 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 47232 Query: 562 cgatgggggataagctt 578 ||||||||||||||||| Sbjct: 47233 cgatgggggataagctt 47249 Score = 153 bits (77), Expect = 8e-34 Identities = 109/119 (91%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 46688 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 46747 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 131 |||||| ||| ||||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 46748 cccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagg 46803
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 735 bits (371), Expect = 0.0 Identities = 398/408 (97%), Gaps = 8/408 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75259 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 75200 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 75199 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc--------ggaggg 75148 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75147 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 75088 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 75087 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 75028 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75027 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 74968 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74967 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 74908 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 420 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74907 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 74860 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 30 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 76 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 583 gtcgagagggaaacagcccggatc 606 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 735 bits (371), Expect = 0.0 Identities = 398/408 (97%), Gaps = 8/408 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382279 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 382338 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 382339 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc--------ggaggg 382390 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382391 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 382450 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 382451 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 382510 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382511 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 382570 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382571 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 382630 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 420 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382631 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 382678 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 30 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 76 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 30 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 76 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 583 gtcgagagggaaacagcccggatc 606 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 583 gtcgagagggaaacagcccggatc 606 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 735 bits (371), Expect = 0.0 Identities = 398/408 (97%), Gaps = 8/408 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113350 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 113291 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 113290 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc--------ggaggg 113239 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113238 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 113179 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 113178 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 113119 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113118 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 113059 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113058 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 112999 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 420 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112998 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 112951 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 30 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 76 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 583 gtcgagagggaaacagcccggatc 606 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 735 bits (371), Expect = 0.0 Identities = 401/412 (97%), Gaps = 8/412 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368032 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 367973 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 367972 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc--------ggaggg 367921 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367920 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 367861 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 367860 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 367801 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367800 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 367741 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367740 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 367681 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 424 ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 367680 gggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgtt 367629 Score = 735 bits (371), Expect = 0.0 Identities = 401/412 (97%), Gaps = 8/412 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184637 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 184578 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 184577 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc--------ggaggg 184526 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184525 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 184466 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 184465 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 184406 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184405 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 184346 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184345 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 184286 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 424 ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 184285 gggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgtt 184234 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 30 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 76 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 583 gtcgagagggaaacagcccggatc 606 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 735 bits (371), Expect = 0.0 Identities = 479/513 (93%), Gaps = 9/513 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4326 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 4385 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||| ||| |||| |||||||||| |||| Sbjct: 4386 cccccatcggggagtgaaatagaacatgaaatcgta---agcttccaagcagtgagagga 4442 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4443 gaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 4502 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||| |||||||||||||||||||||||||||| |||||| ||| Sbjct: 4503 ctggttaagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaatt 4557 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4558 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 4617 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4618 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 4677 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4678 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 4737 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4738 gcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggta 4797 Query: 492 ccaaatcgaggcaaactctgaatactagatatg 524 |||||||||||||||||||||||||||| |||| Sbjct: 4798 ccaaatcgaggcaaactctgaatactaggtatg 4830 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 547 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 606 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 607 accagctaaggcccctaaatgaccgctcagtg 638 |||||||||||||||||||||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtg 4949
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 735 bits (371), Expect = 0.0 Identities = 479/513 (93%), Gaps = 9/513 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 495 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||| ||| |||| |||||||||| |||| Sbjct: 496 cccccatcggggagtgaaatagaacatgaaatcgta---agcttccaagcagtgagagga 552 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 553 gaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 612 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||| |||||||||||||||||||||||||||| |||||| ||| Sbjct: 613 ctggttaagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaatt 667 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 668 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 727 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 728 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 787 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 847 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 848 gcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggta 907 Query: 492 ccaaatcgaggcaaactctgaatactagatatg 524 |||||||||||||||||||||||||||| |||| Sbjct: 908 ccaaatcgaggcaaactctgaatactaggtatg 940 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 547 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 606 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 607 accagctaaggcccctaaatgaccgctcagtg 638 |||||||||||||||||||||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtg 1059
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 735 bits (371), Expect = 0.0 Identities = 479/513 (93%), Gaps = 9/513 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150809 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 150750 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||| ||| |||| |||||||||| |||| Sbjct: 150749 cccccatcggggagtgaaatagaacatgaaatcgta---agcttccaagcagtgagagga 150693 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 150692 gaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 150633 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||| |||||||||||||||||||||||||||| |||||| ||| Sbjct: 150632 ctggttaagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaatt 150578 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 150577 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 150518 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 150517 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 150458 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150457 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 150398 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 150397 gcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggta 150338 Query: 492 ccaaatcgaggcaaactctgaatactagatatg 524 |||||||||||||||||||||||||||| |||| Sbjct: 150337 ccaaatcgaggcaaactctgaatactaggtatg 150305 Score = 735 bits (371), Expect = 0.0 Identities = 479/513 (93%), Gaps = 9/513 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117857 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 117916 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||| ||| |||| |||||||||| |||| Sbjct: 117917 cccccatcggggagtgaaatagaacatgaaatcgta---agcttccaagcagtgagagga 117973 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 117974 gaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 118033 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||| |||||||||||||||||||||||||||| |||||| ||| Sbjct: 118034 ctggttaagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaatt 118088 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 118089 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 118148 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 118149 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 118208 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118209 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 118268 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 118269 gcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggta 118328 Query: 492 ccaaatcgaggcaaactctgaatactagatatg 524 |||||||||||||||||||||||||||| |||| Sbjct: 118329 ccaaatcgaggcaaactctgaatactaggtatg 118361 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Minus Query: 547 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 606 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 607 accagctaaggcccctaaatgaccgctcagtg 638 |||||||||||||||||||||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtg 150186 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 547 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 606 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 607 accagctaaggcccctaaatgaccgctcagtg 638 |||||||||||||||||||||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtg 118480
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 735 bits (371), Expect = 0.0 Identities = 479/513 (93%), Gaps = 9/513 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 495 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||| ||| |||| |||||||||| |||| Sbjct: 496 cccccatcggggagtgaaatagaacatgaaatcgta---agcttccaagcagtgagagga 552 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 553 gaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 612 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||| |||||||||||||||||||||||||||| |||||| ||| Sbjct: 613 ctggttaagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaatt 667 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 668 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 727 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 728 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 787 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 847 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 848 gcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggta 907 Query: 492 ccaaatcgaggcaaactctgaatactagatatg 524 |||||||||||||||||||||||||||| |||| Sbjct: 908 ccaaatcgaggcaaactctgaatactaggtatg 940 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 547 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 606 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 607 accagctaaggcccctaaatgaccgctcagtg 638 |||||||||||||||||||||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtg 1059
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 733 bits (370), Expect = 0.0 Identities = 478/511 (93%), Gaps = 6/511 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 480 cccccatcggggagtgaaatagaacatgaaaccgta---agcttccaagcagtgggagga 536 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 537 gaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 596 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||| | | ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 597 ctggttaagggaaagaa--ccaccggagccatagcgaaagcgagtcttcccagggcaatt 654 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 655 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 714 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 715 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 774 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 834 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 ||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 835 acagttgactggactatctaggggtaaagcactgtttcggtgcgggccgcgagagcggta 894 Query: 492 ccaaatcgaggcaaactctgaatactagata 522 |||||||||||||||||||||||||| |||| Sbjct: 895 ccaaatcgaggcaaactctgaatactggata 925 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 613 taaggcccctaaatgaccgctcagtg 638 ||||||||||||||||||||| |||| Sbjct: 1015 taaggcccctaaatgaccgctaagtg 1040
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 726 bits (366), Expect = 0.0 Identities = 476/511 (93%), Gaps = 10/511 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 4667 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaa 4726 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 4727 cccctgtcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 4783 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4784 gctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 4841 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 4842 ttggttaagggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctatt 4896 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 4897 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtg 4956 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4957 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 5016 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5017 cggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 5076 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||| Sbjct: 5077 gcagttgactggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtac 5136 Query: 493 caaatcgaggcaaactctgaatactagatat 523 ||||||||||||||||||||||||||||||| Sbjct: 5137 caaatcgaggcaaactctgaatactagatat 5167 Score = 170 bits (86), Expect = 4e-39 Identities = 92/94 (97%) Strand = Plus / Plus Query: 548 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 607 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 608 ccagctaaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||| |||||||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgata 5275
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 726 bits (366), Expect = 0.0 Identities = 476/511 (93%), Gaps = 10/511 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 23258 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaa 23199 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 23198 cccctgtcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 23142 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23141 gctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 23084 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 23083 ttggttaagggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctatt 23029 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 23028 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtg 22969 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 22968 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 22909 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22908 cggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 22849 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||| Sbjct: 22848 gcagttgactggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtac 22789 Query: 493 caaatcgaggcaaactctgaatactagatat 523 ||||||||||||||||||||||||||||||| Sbjct: 22788 caaatcgaggcaaactctgaatactagatat 22758 Score = 170 bits (86), Expect = 4e-39 Identities = 92/94 (97%) Strand = Plus / Minus Query: 548 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 607 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 608 ccagctaaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||| |||||||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgata 22650
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 714 bits (360), Expect = 0.0 Identities = 441/464 (95%), Gaps = 8/464 (1%) Strand = Plus / Plus Query: 182 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 240 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 241 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 298 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 299 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 358 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 788 Query: 359 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc-gaa 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 789 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaa 848 Query: 418 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 908 Query: 478 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 537 | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 909 ccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataac 968 Query: 538 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 597 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 aagggtcaaggtcggcaagtgagacgatgggggataagcttcatcgtcgagagggaaaca 1028 Query: 598 gcccggatcaccagctaaggcccctaaatgaccgctcagtgata 641 |||| ||||||| |||||||||||||||||| |||||||||||| Sbjct: 1029 gccctgatcacccgctaaggcccctaaatgatcgctcagtgata 1072 Score = 67.9 bits (34), Expect = 4e-08 Identities = 47/50 (94%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 28 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 77 |||||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 446 ggtgaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 712 bits (359), Expect = 0.0 Identities = 479/516 (92%), Gaps = 11/516 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 4936 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaa 4995 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||| | ||| ||||||||||||| ||||||||| ||||||||| |||||||||| Sbjct: 4996 cccctggcggggagtgaaatagaacatgaaaccgta---agctcccaa-cagtgggagga 5051 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5052 gctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 5109 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 5110 ttggttaagggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctatt 5164 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||| || | || Sbjct: 5165 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtg 5224 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 5225 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 5284 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5285 cggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 5344 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||| Sbjct: 5345 gcagttgactggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtac 5404 Query: 493 caaatcgaggcaaactctgaatactagatatgaccc 528 |||||||||||||||||||||||||||||||||||| Sbjct: 5405 caaatcgaggcaaactctgaatactagatatgaccc 5440 Score = 172 bits (87), Expect = 9e-40 Identities = 100/103 (97%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 540 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 598 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 599 cccggatcaccagctaaggcccctaaatgaccgctcagtgata 641 ||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgata 5547
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 712 bits (359), Expect = 0.0 Identities = 479/516 (92%), Gaps = 11/516 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 4936 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaa 4995 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||| | ||| ||||||||||||| ||||||||| ||||||||| |||||||||| Sbjct: 4996 cccctggcggggagtgaaatagaacatgaaaccgta---agctcccaa-cagtgggagga 5051 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5052 gctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 5109 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 5110 ttggttaagggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctatt 5164 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||| || | || Sbjct: 5165 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtg 5224 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 5225 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 5284 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5285 cggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 5344 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||| Sbjct: 5345 gcagttgactggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtac 5404 Query: 493 caaatcgaggcaaactctgaatactagatatgaccc 528 |||||||||||||||||||||||||||||||||||| Sbjct: 5405 caaatcgaggcaaactctgaatactagatatgaccc 5440 Score = 172 bits (87), Expect = 9e-40 Identities = 100/103 (97%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 540 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 598 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 599 cccggatcaccagctaaggcccctaaatgaccgctcagtgata 641 ||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgata 5547
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 698 bits (352), Expect = 0.0 Identities = 562/629 (89%), Gaps = 11/629 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138831 ggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaa 138772 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| ||||||| |||||||||||| Sbjct: 138771 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccgagcagtgggagga 138715 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| ||||||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 138714 gaattggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcggcggc 138655 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 138654 ctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcccagggcaact 138600 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 138599 gtcgctgcttatggacccgaacccgggtgatctatccatgaccaggatgaagcttggata 138540 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 ||| | | ||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 138539 gaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttag 138480 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 138479 gggtgaaatgccactcgaacccggagctagctggttctccccgaaatgcgttgaggcgca 138420 Query: 433 gcagttgact-ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 || ||||||| || | || | |||||||||||||| |||||||||||||| |||| ||| Sbjct: 138419 gcggttgactaggctacctggaggtaaagcactgttacggtgcgggctgcgagagcagta 138360 Query: 492 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca--ggggtcaaggt 549 ||||| |||||||||||||||||||| | |||| ||| | | | ||| |||| ||||| Sbjct: 138359 ccaaaccgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaaggt 138300 Query: 550 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 609 |||||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 138299 cggccagtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcacc 138240 Query: 610 agctaaggcccctaaatgaccgctcagtg 638 ||||||||||||| ||||||||||||||| Sbjct: 138239 agctaaggcccctgaatgaccgctcagtg 138211 Score = 698 bits (352), Expect = 0.0 Identities = 562/629 (89%), Gaps = 11/629 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 83046 ggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaa 83105 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| ||||||| |||||||||||| Sbjct: 83106 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccgagcagtgggagga 83162 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| ||||||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 83163 gaattggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcggcggc 83222 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 83223 ctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcccagggcaact 83277 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 83278 gtcgctgcttatggacccgaacccgggtgatctatccatgaccaggatgaagcttggata 83337 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 ||| | | ||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 83338 gaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttag 83397 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 83398 gggtgaaatgccactcgaacccggagctagctggttctccccgaaatgcgttgaggcgca 83457 Query: 433 gcagttgact-ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 || ||||||| || | || | |||||||||||||| |||||||||||||| |||| ||| Sbjct: 83458 gcggttgactaggctacctggaggtaaagcactgttacggtgcgggctgcgagagcagta 83517 Query: 492 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca--ggggtcaaggt 549 ||||| |||||||||||||||||||| | |||| ||| | | | ||| |||| ||||| Sbjct: 83518 ccaaaccgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaaggt 83577 Query: 550 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 609 |||||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 83578 cggccagtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcacc 83637 Query: 610 agctaaggcccctaaatgaccgctcagtg 638 ||||||||||||| ||||||||||||||| Sbjct: 83638 agctaaggcccctgaatgaccgctcagtg 83666
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 650 bits (328), Expect = 0.0 Identities = 468/510 (91%), Gaps = 6/510 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 144356 ggctaaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaa 144415 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 144416 cccccgtcggggagtgaaatagaacatgaaaccgcg---agctcccaagcagtgggagga 144472 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| | ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 144473 gaatgagatctctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggc 144532 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||| | ||||| |||||||||||||||||||||||||| | |||| ||| Sbjct: 144533 ccggttaagggggag-aaccc-ccggagccgtagcgaaagcgagtcttgctggggcaatt 144590 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 144591 gtcaccgcttataaacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 144650 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 144651 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 144710 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144711 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 144770 Query: 433 gcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 |||||||||| || |||||||||||||||||| ||| |||||||||||||| |||||||| Sbjct: 144771 gcagttgactagaccatctaggggtaaagcaccgttccggtgcgggctgcgagagcggta 144830 Query: 492 ccaaatcgaggcaaactctgaatactagat 521 |||||||||||||||||||||||||||||| Sbjct: 144831 ccaaatcgaggcaaactctgaatactagat 144860 Score = 650 bits (328), Expect = 0.0 Identities = 468/510 (91%), Gaps = 6/510 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 88495 ggctaaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaa 88436 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 88435 cccccgtcggggagtgaaatagaacatgaaaccgcg---agctcccaagcagtgggagga 88379 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| | ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 88378 gaatgagatctctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggc 88319 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||| | ||||| |||||||||||||||||||||||||| | |||| ||| Sbjct: 88318 ccggttaagggggag-aaccc-ccggagccgtagcgaaagcgagtcttgctggggcaatt 88261 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 88260 gtcaccgcttataaacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 88201 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 88200 aaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 88141 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88140 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 88081 Query: 433 gcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 |||||||||| || |||||||||||||||||| ||| |||||||||||||| |||||||| Sbjct: 88080 gcagttgactagaccatctaggggtaaagcaccgttccggtgcgggctgcgagagcggta 88021 Query: 492 ccaaatcgaggcaaactctgaatactagat 521 |||||||||||||||||||||||||||||| Sbjct: 88020 ccaaatcgaggcaaactctgaatactagat 87991 Score = 139 bits (70), Expect = 1e-29 Identities = 82/86 (95%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 613 taaggcccctaaatgaccgctcagtg 638 |||||||||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtg 144984 Score = 139 bits (70), Expect = 1e-29 Identities = 82/86 (95%) Strand = Plus / Minus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 613 taaggcccctaaatgaccgctcagtg 638 |||||||||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtg 87867
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 650 bits (328), Expect = 0.0 Identities = 471/514 (91%), Gaps = 11/514 (2%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6111 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 6052 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||| | ||| ||||||||||||| ||||||||| ||| ||||||||||||||| Sbjct: 6051 cccctatcggggagtgaaatagaacatgaaaccgta---agcctccaagcagtgggagga 5995 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| | |||||||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 5994 gaatggaatctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggc 5935 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||| || |||||||||||||||||| |||||||||| ||||||| ||| Sbjct: 5934 ttggttaagggcac-----ccaccggagccgtagcgagagcgagtcttcatagggcaatt 5880 Query: 253 gtcactgctt-atggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 311 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5879 gtcactgctttatggacccgaacctgggtgatctatccatgaccaggatgaagct-ggat 5821 Query: 312 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 371 ||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 5820 gaaactaagtagaggtccgaaccgactgatgttgcaaaatcagcggatgagttgtggtta 5761 Query: 372 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5760 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 5701 Query: 432 agcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 490 |||||||||||||| | ||||||||||||||||||||||||| ||| | | |||||| Sbjct: 5700 agcagttgactggaccgtctaggggtaaagcactgtttcggtataggccgtgtaagcggt 5641 Query: 491 accaaatcgaggcaaactctgaatactagatatg 524 || | ||||||||||||| ||||||||||||||| Sbjct: 5640 acgacatcgaggcaaactatgaatactagatatg 5607 Score = 131 bits (66), Expect = 3e-27 Identities = 87/94 (92%) Strand = Plus / Minus Query: 547 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 606 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 607 accagctaaggcccctaaatgaccgctcagtgat 640 ||||| |||||||||||||||||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgat 5509
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 634 bits (320), Expect = e-179 Identities = 413/442 (93%), Gaps = 9/442 (2%) Strand = Plus / Plus Query: 49 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta 60 Query: 109 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 168 || ||||||||||||||||| || | | ||||||||||||||||||||||||||| Sbjct: 61 ---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatg 116 Query: 169 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 228 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 117 agccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcg 171 Query: 229 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 288 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 172 aaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatc 231 Query: 289 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 348 ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 232 catgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaag 291 Query: 349 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 351 Query: 409 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 468 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 352 ctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgttt 411 Query: 469 cggtgcgggctgcgcgagcggt 490 |||||||||| ||| ||||||| Sbjct: 412 cggtgcgggccgcgagagcggt 433
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 615 bits (310), Expect = e-173 Identities = 390/415 (93%), Gaps = 10/415 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 411 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 470 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 471 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 527 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 528 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 586 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 640 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 641 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 700 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 760 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 427 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 815
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 613 bits (309), Expect = e-172 Identities = 461/508 (90%), Gaps = 9/508 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 436 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaa 495 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| ||| ||||||||||||||| Sbjct: 496 cccccatcggggagtgaaatagaacatgaaaccgta---agcctccaagcagtgggagga 552 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 553 gaatggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 612 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||| | ||| || |||||||||||||||||||||||| |||||||| | Sbjct: 613 ctggttaaggcga--gaagcc---ggagccgtagcgaaagcgagtctttctagggcgaat 667 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| || Sbjct: 668 gtcactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtg 727 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 || | ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 728 aagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttag 787 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 788 gggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 847 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 || ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 848 gcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggta 907 Query: 492 ccaaatcgaggcaaactctgaatactag 519 |||||||||||||||||||||||||||| Sbjct: 908 ccaaatcgaggcaaactctgaatactag 935 Score = 143 bits (72), Expect = 8e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 547 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 606 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 607 accagctaaggcccctaaatgaccgctcagtg 638 |||||||||||||||||||||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtg 1037
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 613 bits (309), Expect = e-172 Identities = 461/508 (90%), Gaps = 9/508 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 449 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaa 508 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| ||| ||||||||||||||| Sbjct: 509 cccccatcggggagtgaaatagaacatgaaaccgta---agcctccaagcagtgggagga 565 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 566 gaatggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 625 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||| | ||| || |||||||||||||||||||||||| |||||||| | Sbjct: 626 ctggttaaggcga--gaagcc---ggagccgtagcgaaagcgagtctttctagggcgaat 680 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| || Sbjct: 681 gtcactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtg 740 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 || | ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 741 aagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttag 800 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 801 gggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 860 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 || ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 861 gcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggta 920 Query: 492 ccaaatcgaggcaaactctgaatactag 519 |||||||||||||||||||||||||||| Sbjct: 921 ccaaatcgaggcaaactctgaatactag 948 Score = 143 bits (72), Expect = 8e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 547 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 606 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 607 accagctaaggcccctaaatgaccgctcagtg 638 |||||||||||||||||||||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtg 1050
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 609 bits (307), Expect = e-171 Identities = 462/509 (90%), Gaps = 11/509 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 553 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaa 612 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| Sbjct: 613 cccccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggagga 669 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 670 gaatggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 729 Query: 193 ttggttaagggaacg-gaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 251 ||||||||| || ||| || |||||||||||||||||||||||| |||||||| Sbjct: 730 ctggttaagg---cgtgaagcc---ggagccgtagcgaaagcgagtctttctagggcgaa 783 Query: 252 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 311 |||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| | Sbjct: 784 tgtcactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggt 843 Query: 312 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 371 ||| | ||| ||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 844 gaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggtta 903 Query: 372 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 431 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 904 ggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgc 963 Query: 432 agcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 490 ||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 964 agcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggt 1023 Query: 491 accaaatcgaggcaaactctgaatactag 519 ||||||||||||||||||||||||||||| Sbjct: 1024 accaaatcgaggcaaactctgaatactag 1052 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 547 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 606 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 607 accagctaaggcccctaaatgaccgctcagtg 638 |||||||||||||||||||||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtg 1154
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 589 bits (297), Expect = e-165 Identities = 396/426 (92%), Gaps = 11/426 (2%) Strand = Plus / Plus Query: 51 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 110 |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 1 cgtgagggaagggtgaaaagaaccc--atcggggagtgaaatagaacatgaaaccgta-- 56 Query: 111 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 170 || ||||||||||||||||| || | | ||||||||||||||||||||||||||||| Sbjct: 57 -agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgag 114 Query: 171 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 230 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 115 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 169 Query: 231 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 290 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 229 Query: 291 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 350 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 230 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 289 Query: 351 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 290 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggctct 349 Query: 411 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 470 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 350 ccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcg 409 Query: 471 gtgcgg 476 |||||| Sbjct: 410 gtgcgg 415
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 575 bits (290), Expect = e-161 Identities = 456/508 (89%), Gaps = 10/508 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 438 ggctaaatactcctgggtgaccgatagagaagaagtaccgcgagggaaaggtgaaaagaa 497 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||| ||| |||| |||||||||||||| Sbjct: 498 cccccatcggggagtgaaatagaacatgaaatcgta---agctttcaagcagtgggagga 554 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 555 gaattcaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 614 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||| ||||||||||||||||||||||||||| || ||||||||| Sbjct: 615 gtggttaagggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgatt 668 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| || Sbjct: 669 gtcactgcttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtg 728 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||| ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 729 aaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttag 788 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||| ||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 789 cggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 848 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 || ||| | ||| | |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 849 gcggttaattgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggta 908 Query: 492 ccaaatcgaggcaaactctgaatactag 519 |||||||||||||||||||||||||||| Sbjct: 909 ccaaatcgaggcaaactctgaatactag 936 Score = 133 bits (67), Expect = 8e-28 Identities = 82/87 (94%) Strand = Plus / Plus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 612 ctaaggcccctaaatgaccgctcagtg 638 ||||||||||||||||||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtg 1039
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 569 bits (287), Expect = e-159 Identities = 290/291 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 397 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 457 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 458 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 517 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 518 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 577 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 303 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 628
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 567 bits (286), Expect = e-158 Identities = 445/494 (90%), Gaps = 8/494 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 ||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaagt 740 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 800 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 |||| || |||||| |||||| ||||||||||||||||||||| |||||||| |||| || Sbjct: 801 gccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt-ac 859 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||||||||||||||||||||||||||||| |||| ||| |||| ||||||||| ||| Sbjct: 860 cagacatctaggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattgag 919 Query: 502 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 559 ||||||| ||||||||||||||||| ||||||||||||||| | ||||| | ||||||| Sbjct: 920 gcaaactatgaatactagatatgacctccaaaaataacagggataaaggtggaccagtga 979 Query: 560 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 619 ||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 980 gaccatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcc 1039 Query: 620 cctaaatgaccgct 633 |||||||||||||| Sbjct: 1040 cctaaatgaccgct 1053 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 442 ggctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaa 501 Query: 73 cccccagtgggtagtgaaatagaacgtgaaa 103 || | | |||| ||||||||||||| ||||| Sbjct: 502 cctctactggggagtgaaatagaacatgaaa 532
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 559 bits (282), Expect = e-156 Identities = 454/508 (89%), Gaps = 10/508 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 124827 ggctaaatactcctgggtgaccgatagagaagaagtaccgcgagggaaaggtgaaaagaa 124768 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||| ||| |||| |||||||||||||| Sbjct: 124767 cccccatcggggagtgaaatagaacatgaaatcgta---agctttcaagcagtgggagga 124711 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 124710 gaattcaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 124651 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||| ||||||||||||||||||||||||||| || ||||||||| Sbjct: 124650 gtggttaagggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgatt 124597 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| || Sbjct: 124596 gtcactgcttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtg 124537 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 || | ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 124536 aagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttag 124477 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||| ||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 124476 cggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 124417 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 || ||| | ||| | |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 124416 gcggttaattgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggta 124357 Query: 492 ccaaatcgaggcaaactctgaatactag 519 |||||||||| ||||||||||||||||| Sbjct: 124356 ccaaatcgagtcaaactctgaatactag 124329 Score = 559 bits (282), Expect = e-156 Identities = 454/508 (89%), Gaps = 10/508 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 95039 ggctaaatactcctgggtgaccgatagagaagaagtaccgcgagggaaaggtgaaaagaa 95098 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||| ||| |||| |||||||||||||| Sbjct: 95099 cccccatcggggagtgaaatagaacatgaaatcgta---agctttcaagcagtgggagga 95155 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95156 gaattcaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 95215 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||| ||||||||||||||||||||||||||| || ||||||||| Sbjct: 95216 gtggttaagggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgatt 95269 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| || Sbjct: 95270 gtcactgcttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtg 95329 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 || | ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 95330 aagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttag 95389 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||| ||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 95390 cggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 95449 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 || ||| | ||| | |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95450 gcggttaattgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggta 95509 Query: 492 ccaaatcgaggcaaactctgaatactag 519 |||||||||| ||||||||||||||||| Sbjct: 95510 ccaaatcgagtcaaactctgaatactag 95537 Score = 133 bits (67), Expect = 8e-28 Identities = 82/87 (94%) Strand = Plus / Minus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 612 ctaaggcccctaaatgaccgctcagtg 638 ||||||||||||||||||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtg 124226 Score = 133 bits (67), Expect = 8e-28 Identities = 82/87 (94%) Strand = Plus / Plus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 612 ctaaggcccctaaatgaccgctcagtg 638 ||||||||||||||||||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtg 95640
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 553 bits (279), Expect = e-154 Identities = 457/513 (89%), Gaps = 10/513 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 438 ggctaaatactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaa 497 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||| | |||| |||||||||||||| Sbjct: 498 cccccataggggagtgaaatagaacatgaaaccata---agctttcaagcagtgggagga 554 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | | | || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 555 ggattgaacctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 614 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||| |||||| |||| |||||||||| |||||| ||||||||| Sbjct: 615 atggttaagggaat-----ccaccgaagccatagcgaaagcaagtctttc-agggcgatt 668 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 669 gtcactgtttatggacccgaacccgggtgatctatccatgaccaggatgaagcttgggta 728 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 729 aaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttag 788 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 789 gggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 848 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 || ||| | ||| | || ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 849 gcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggta 908 Query: 492 ccaaatcgaggcaaactctgaatactagatatg 524 ||||||||| ||||||||||||||||| ||||| Sbjct: 909 ccaaatcgatgcaaactctgaatactaaatatg 941 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 612 ctaaggcccctaaat 626 |||||||||||||| Sbjct: 1011 ttaaggcccctaaat 1025
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 547 bits (276), Expect = e-152 Identities = 458/514 (89%), Gaps = 11/514 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||| ||||||||| |||| ||||||||||| |||||||| ||||||||||| Sbjct: 455 ggctaaatactcttgggtgaccaatagtgaagtagtaccatgagggaagggtgaaaagaa 514 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||| | |||| ||||||||||||| ||||| | | |||| ||||||||||||||| Sbjct: 515 cccctattggggagtgaaatagaacatgaaaacata---agctaccaagcagtgggagga 571 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | |||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 572 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataagtagtggc 629 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||| |||| ||||||||||| |||||||||| |||||| ||||||| | | Sbjct: 630 ctggttaagg----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggcaaat 684 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||| |||||||| |||||||| ||||||||||| |||||||||||||||| |||| || Sbjct: 685 gtcattgcttatgtacccgaacttgggtgatctaaccatgaccaggatgaaatttggttg 744 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 aaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 804 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||| ||| Sbjct: 805 gggtgaaatgccaatcgaacccaaagctagctggttctccccgaaatgcgtttaggggca 864 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||| || ||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 865 gcagtt-accggacatctaggggtaaagcactgtttcggtgcgggtctcgagagcggtac 923 Query: 493 caaatcgaggcaaactctgaatactagatatgac 526 ||||| |||||||||| ||||||||||||||||| Sbjct: 924 caaattgaggcaaactatgaatactagatatgac 957 Score = 133 bits (67), Expect = 8e-28 Identities = 79/83 (95%) Strand = Plus / Plus Query: 551 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 610 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 611 gctaaggcccctaaatgaccgct 633 ||||||||||||||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgct 1082
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 533 bits (269), Expect = e-148 Identities = 452/508 (88%), Gaps = 10/508 (1%) Strand = Plus / Plus Query: 15 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 74 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 437 ctaaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacc 496 Query: 75 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 134 |||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 497 cccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggagg 553 Query: 135 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 194 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 554 ttttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggcta 613 Query: 195 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 254 |||||||| | | || ||||||||| |||||||||||||||||||||||||||| || Sbjct: 614 ggttaaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gt 668 Query: 255 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 314 ||||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | |||| Sbjct: 669 cactgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaa 728 Query: 315 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 374 ||| || || |||||||||||| ||||||||| |||| ||||||||||||||||||||| Sbjct: 729 actcagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggg 788 Query: 375 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 434 ||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 789 gtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 848 Query: 435 agttgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||| | || ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 849 ggttggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtac 908 Query: 493 caaatcgaggcaaactctgaatactaga 520 |||||||| ||||||||||||||||||| Sbjct: 909 caaatcgatgcaaactctgaatactaga 936 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 613 taaggcccctaaatgaccgctcagtg 638 ||||||||||||||| ||||| |||| Sbjct: 1012 taaggcccctaaatggccgctaagtg 1037
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 533 bits (269), Expect = e-148 Identities = 452/508 (88%), Gaps = 10/508 (1%) Strand = Plus / Minus Query: 15 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 74 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 115225 ctaaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacc 115166 Query: 75 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 134 |||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115165 cccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggagg 115109 Query: 135 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 194 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 115108 ttttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggcta 115049 Query: 195 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 254 |||||||| | | || ||||||||| |||||||||||||||||||||||||||| || Sbjct: 115048 ggttaaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gt 114994 Query: 255 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 314 ||||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | |||| Sbjct: 114993 cactgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaa 114934 Query: 315 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 374 ||| || || |||||||||||| ||||||||| |||| ||||||||||||||||||||| Sbjct: 114933 actcagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggg 114874 Query: 375 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 434 ||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 114873 gtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 114814 Query: 435 agttgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||| | || ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 114813 ggttggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtac 114754 Query: 493 caaatcgaggcaaactctgaatactaga 520 |||||||| ||||||||||||||||||| Sbjct: 114753 caaatcgatgcaaactctgaatactaga 114726 Score = 533 bits (269), Expect = e-148 Identities = 452/508 (88%), Gaps = 10/508 (1%) Strand = Plus / Plus Query: 15 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 74 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 86763 ctaaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacc 86822 Query: 75 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 134 |||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86823 cccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggagg 86879 Query: 135 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 194 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 86880 ttttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggcta 86939 Query: 195 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 254 |||||||| | | || ||||||||| |||||||||||||||||||||||||||| || Sbjct: 86940 ggttaaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gt 86994 Query: 255 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 314 ||||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | |||| Sbjct: 86995 cactgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaa 87054 Query: 315 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 374 ||| || || |||||||||||| ||||||||| |||| ||||||||||||||||||||| Sbjct: 87055 actcagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggg 87114 Query: 375 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 434 ||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 87115 gtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 87174 Query: 435 agttgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||| | || ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 87175 ggttggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtac 87234 Query: 493 caaatcgaggcaaactctgaatactaga 520 |||||||| ||||||||||||||||||| Sbjct: 87235 caaatcgatgcaaactctgaatactaga 87262 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Minus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 613 taaggcccctaaatgaccgctcagtg 638 ||||||||||||||| ||||| |||| Sbjct: 114650 taaggcccctaaatggccgctaagtg 114625 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 613 taaggcccctaaatgaccgctcagtg 638 ||||||||||||||| ||||| |||| Sbjct: 87338 taaggcccctaaatggccgctaagtg 87363
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 523 bits (264), Expect = e-145 Identities = 448/506 (88%), Gaps = 5/506 (0%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 4482 ggctaaatactcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaa 4541 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||| ||||| ||||||||| || |||||||||||||| Sbjct: 4542 cccccataggggagtgaaagagaacatgaaaccgtag---gccttcaagcagtgggagga 4598 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4599 gaattgtatctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 4658 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| | || ||||||||| |||||||||| |||||| |||||| ||| Sbjct: 4659 ttggttaagggaaattatcc-accggagccatagcgaaagcaagtctttttagggctatt 4717 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||| |||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 4718 gtcactgtctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 4777 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 4778 aaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 4837 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 4838 tggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 4897 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 ||| || |||| || ||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 4898 gcaattaactgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggta 4957 Query: 492 ccaaatcgaggcaaactctgaatact 517 |||||||||||||||||||||||||| Sbjct: 4958 ccaaatcgaggcaaactctgaatact 4983 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 555 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 614 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 615 aggcccctaaatgaccgctcagtg 638 ||||||||||||| ||||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtg 5088
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 523 bits (264), Expect = e-145 Identities = 448/506 (88%), Gaps = 5/506 (0%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 449 ggctaaatactcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaa 508 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||| ||||| ||||||||| || |||||||||||||| Sbjct: 509 cccccataggggagtgaaagagaacatgaaaccgtag---gccttcaagcagtgggagga 565 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 566 gaattgtatctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 625 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| | || ||||||||| |||||||||| |||||| |||||| ||| Sbjct: 626 ttggttaagggaaattatcc-accggagccatagcgaaagcaagtctttttagggctatt 684 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||| |||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 685 gtcactgtctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 744 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 745 aaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 804 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 805 tggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 864 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 ||| || |||| || ||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 865 gcaattaactgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggta 924 Query: 492 ccaaatcgaggcaaactctgaatact 517 |||||||||||||||||||||||||| Sbjct: 925 ccaaatcgaggcaaactctgaatact 950 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 555 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 614 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 615 aggcccctaaatgaccgctcagtg 638 ||||||||||||| ||||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtg 1055
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 523 bits (264), Expect = e-145 Identities = 448/506 (88%), Gaps = 5/506 (0%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 449 ggctaaatactcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaa 508 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||| ||||| ||||||||| || |||||||||||||| Sbjct: 509 cccccataggggagtgaaagagaacatgaaaccgtag---gccttcaagcagtgggagga 565 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 566 gaattgtatctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 625 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| | || ||||||||| |||||||||| |||||| |||||| ||| Sbjct: 626 ttggttaagggaaattatcc-accggagccatagcgaaagcaagtctttttagggctatt 684 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||| |||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 685 gtcactgtctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 744 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 745 aaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 804 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 805 tggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 864 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 ||| || |||| || ||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 865 gcaattaactgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggta 924 Query: 492 ccaaatcgaggcaaactctgaatact 517 |||||||||||||||||||||||||| Sbjct: 925 ccaaatcgaggcaaactctgaatact 950 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 555 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 614 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 615 aggcccctaaatgaccgctcagtg 638 ||||||||||||| ||||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtg 1055
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 502 bits (253), Expect = e-139 Identities = 450/513 (87%), Gaps = 12/513 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 395 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaa 454 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 ||||| ||| ||||||||||||| ||||||||| ||| |||||||||||||| Sbjct: 455 cccccgtaggggagtgaaatagaacatgaaaccgta---agcctacaagcagtgggagga 511 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 512 gaatagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggc 571 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||| ||| || ||||||||||||||||| |||| || | || || | Sbjct: 572 ctggttaagagaat-------actggagccgtagcgaaagcaagtcatatttgg-cgcat 623 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||| |||| |||||||||| |||||||||||||||| ||||| |||| ||||| || Sbjct: 624 gtcactgtttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggtg 683 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 || | ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 684 aagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttag 743 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 744 gggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 803 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 || |||| ||||| | ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 804 gcgattgattggactacttaggggtaaagcactgtttcggtgcgggctgcgaaagcggta 863 Query: 492 ccaaatcgaggcaaactctgaatactagatatg 524 |||||||||||||||||||||||||||| |||| Sbjct: 864 ccaaatcgaggcaaactctgaatactaggtatg 896 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 554 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 613 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 614 aaggcccctaaatgaccgctcagtgata 641 |||||||| ||||||||||||||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgata 999
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 502 bits (253), Expect = e-139 Identities = 449/511 (87%), Gaps = 5/511 (0%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 444 ggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaa 503 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||| ||||| ||||||||| ||| ||||||||||||| Sbjct: 504 cccccataggggagtgaaaaagaacatgaaaccgtag---gctttcaagcagtgggagaa 560 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| | |||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 561 gaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatagtggc 620 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 | ||||||||||| | | || |||||| |||||||||| |||||| ||||| ||| Sbjct: 621 tgggttaagggaatttatgc-actggagccatagcgaaagcaagtcttttcagggctatt 679 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||| |||||||||||||| |||||||||| ||||| |||||||||||||||| || Sbjct: 680 gtcactgtctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtg 739 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaactaagtggaggtcccaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 tggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 ||| || ||||||| ||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 860 gcaattaactggactatccaggggtaaagcactgtttcggtgcgggctgcgaaagcggta 919 Query: 492 ccaaatcgaggcaaactctgaatactagata 522 |||||||||| ||||||||||||||| |||| Sbjct: 920 ccaaatcgagacaaactctgaatactggata 950 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 555 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 614 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 615 aggcccctaaatgaccgctcagtg 638 ||||||||||||| ||||| |||| Sbjct: 1027 aggcccctaaatggccgctaagtg 1050
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 480 bits (242), Expect = e-132 Identities = 447/514 (86%), Gaps = 11/514 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||| Sbjct: 842 ggctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaa 901 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||| ||||||||| |||| ||||||||||||| Sbjct: 902 cccccataggggagtgaaatagactatgaaaccgta---agcttacaagcagtgggagaa 958 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 959 gaatctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggc 1018 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||| | |||| |||||||||||||||||||| | |||||| | Sbjct: 1019 ctggttaagggtat-------accgaagccgtagcgaaagcgagtcattcaagggcgcat 1071 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||| || Sbjct: 1072 gtcactgtttatggacccgaacccgggtgatctatccatggccagggtgaagcttgggtg 1131 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 || | ||| |||| |||||||||||| ||||||| || ||||||||||| ||||||||| Sbjct: 1132 aagccaagtggaggcccgaaccgactggtgttgaaaaaccagcggatgagctgtggttag 1191 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 1192 gggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 1251 Query: 433 gcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 491 || |||||| || | ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1252 gcgattgactaaactgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggta 1311 Query: 492 ccaaatcgaggcaaactctgaatactagatatga 525 ||||||||||||||||||||||||||||| |||| Sbjct: 1312 ccaaatcgaggcaaactctgaatactagacatga 1345 Score = 121 bits (61), Expect = 3e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 554 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 613 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 614 aaggcccctaaatgaccgctcagtg 638 ||||||||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtg 1442
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 204 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 205 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 264 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 265 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 324 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 740 Query: 325 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 384 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 385 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 444 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 445 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 503 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 504 aaactctgaatactagatatg 524 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 137 bits (69), Expect = 5e-29 Identities = 87/93 (93%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 438 ggctaaatactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaa 497 Query: 73 cccccagtgggtagtgaaatagaacgtgaaacc 105 |||||| ||| ||||||||||||| ||||||| Sbjct: 498 cccccataggggagtgaaatagaacatgaaacc 530 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 612 ctaaggcccctaaat 626 |||||||||||||| Sbjct: 1011 ttaaggcccctaaat 1025
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 204 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 205 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 264 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 265 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 324 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 3715 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 3774 Query: 325 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 384 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3775 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 3834 Query: 385 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 444 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 3835 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 3894 Query: 445 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 503 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 3895 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 3954 Query: 504 aaactctgaatactagatatg 524 ||||||||||||||| ||||| Sbjct: 3955 aaactctgaatactaaatatg 3975 Score = 137 bits (69), Expect = 5e-29 Identities = 87/93 (93%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 3472 ggctaaatactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaa 3531 Query: 73 cccccagtgggtagtgaaatagaacgtgaaacc 105 |||||| ||| ||||||||||||| ||||||| Sbjct: 3532 cccccataggggagtgaaatagaacatgaaacc 3564 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 612 ctaaggcccctaaat 626 |||||||||||||| Sbjct: 4045 ttaaggcccctaaat 4059
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 452 bits (228), Expect = e-124 Identities = 446/514 (86%), Gaps = 11/514 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 430 ggctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaa 489 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| |||| |||||| |||||| ||||| | | ||| ||||||||||||||| Sbjct: 490 cccccattggggagtgaactagaacatgaaaacatat---gctaccaagcagtgggagga 546 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 || || | |||||||| |||||| ||||||||||||| |||||||||||| | |||||| Sbjct: 547 gacaggg--ctctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggc 604 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||| |||| ||||||||||| |||||||||| |||||| |||||| | | Sbjct: 605 ctggttaagg----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggaaaat 659 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||| ||||| ||||||||||| ||||||||||| |||||||||||||| | |||| | Sbjct: 660 gtcattgcttgtggacccgaacttgggtgatctaaccatgaccaggatgcaatttggtta 719 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 720 aaactaagtgggggtctgaaccgactgatgttgaagaatcagcggatgagttgtggttag 779 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 ||||||||||||| ||||||||| ||||||||||||| ||||||||||| || ||||||| Sbjct: 780 gggtgaaatgccaatcgaacccaaagctagctggttcgccccgaaatgcatttaggcgca 839 Query: 433 gcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 492 |||||| || || ||||||||||||||||| ||||| |||||||| || ||||||||| Sbjct: 840 gcagtt-accgggcatctaggggtaaagcattgttttggtgcgggtcacgagagcggtac 898 Query: 493 caaatcgaggcaaactctgaatactagatatgac 526 ||||| |||||| ||| ||||||||||||||||| Sbjct: 899 caaattgaggcagactatgaatactagatatgac 932 Score = 105 bits (53), Expect = 2e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 529 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 588 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 589 agggaaacagcccggatcaccagctaaggcccctaaatgaccgct 633 |||| |||| || |||||| ||||||| |||||||||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgct 1048
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 442 bits (223), Expect = e-121 Identities = 317/347 (91%), Gaps = 1/347 (0%) Strand = Plus / Minus Query: 295 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 354 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 355 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 414 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 415 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 474 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 475 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 534 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 535 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 594 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 595 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 641 ||| || |||||||||||||||||||||||||||| ||||||||||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgata 2766 Score = 157 bits (79), Expect = 5e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 262 tatggacccgaacct 276 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 22 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 81 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 82 ggtagtgaaatagaacgtgaaacc 105 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 420 bits (212), Expect = e-114 Identities = 267/284 (94%), Gaps = 6/284 (2%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 200 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 201 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 260 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 261 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 320 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 194 Query: 321 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 254 Query: 381 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 424 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 298 Score = 349 bits (176), Expect = 7e-93 Identities = 194/200 (97%) Strand = Plus / Plus Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 502 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 561 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 562 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 621 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 622 taaatgaccgctcagtgata 641 ||||||| |||||||||||| Sbjct: 497 taaatgatcgctcagtgata 516
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 410 bits (207), Expect = e-111 Identities = 423/491 (86%), Gaps = 8/491 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 502 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 559 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 560 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 619 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 620 cctaaatgacc 630 ||||||||||| Sbjct: 1016 cctaaatgacc 1026 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||| |||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 419 ggctagatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaa 478 Query: 73 cccccagtgggtagtgaaatagaacgtgaaa 103 ||| | |||| ||||||||||||| ||||| Sbjct: 479 cccttattggggagtgaaatagaacatgaaa 509
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 410 bits (207), Expect = e-111 Identities = 423/491 (86%), Gaps = 8/491 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 502 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 559 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 560 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 619 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 620 cctaaatgacc 630 ||||||||||| Sbjct: 1016 cctaaatgacc 1026 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||| |||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 419 ggctagatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaa 478 Query: 73 cccccagtgggtagtgaaatagaacgtgaaa 103 ||| | |||| ||||||||||||| ||||| Sbjct: 479 cccttattggggagtgaaatagaacatgaaa 509
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 410 bits (207), Expect = e-111 Identities = 423/491 (86%), Gaps = 8/491 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 502 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 559 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 560 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 619 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 620 cctaaatgacc 630 ||||||||||| Sbjct: 1016 cctaaatgacc 1026 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||| |||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 419 ggctagatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaa 478 Query: 73 cccccagtgggtagtgaaatagaacgtgaaa 103 ||| | |||| ||||||||||||| ||||| Sbjct: 479 cccttattggggagtgaaatagaacatgaaa 509
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 410 bits (207), Expect = e-111 Identities = 423/491 (86%), Gaps = 8/491 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 502 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 559 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 560 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 619 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 620 cctaaatgacc 630 ||||||||||| Sbjct: 1016 cctaaatgacc 1026 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||| |||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 419 ggctagatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaa 478 Query: 73 cccccagtgggtagtgaaatagaacgtgaaa 103 ||| | |||| ||||||||||||| ||||| Sbjct: 479 cccttattggggagtgaaatagaacatgaaa 509
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 410 bits (207), Expect = e-111 Identities = 423/491 (86%), Gaps = 8/491 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 502 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 559 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 560 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 619 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 620 cctaaatgacc 630 ||||||||||| Sbjct: 1016 cctaaatgacc 1026 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||| |||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 419 ggctagatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaa 478 Query: 73 cccccagtgggtagtgaaatagaacgtgaaa 103 ||| | |||| ||||||||||||| ||||| Sbjct: 479 cccttattggggagtgaaatagaacatgaaa 509
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 410 bits (207), Expect = e-111 Identities = 423/491 (86%), Gaps = 8/491 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 502 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 559 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 560 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 619 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 620 cctaaatgacc 630 ||||||||||| Sbjct: 1015 cctaaatgacc 1025 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||| |||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 418 ggctagatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaa 477 Query: 73 cccccagtgggtagtgaaatagaacgtgaaa 103 ||| | |||| ||||||||||||| ||||| Sbjct: 478 cccttattggggagtgaaatagaacatgaaa 508
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 410 bits (207), Expect = e-111 Identities = 423/491 (86%), Gaps = 8/491 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 502 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 559 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 560 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 619 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 620 cctaaatgacc 630 ||||||||||| Sbjct: 1016 cctaaatgacc 1026 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||| |||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 419 ggctagatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaa 478 Query: 73 cccccagtgggtagtgaaatagaacgtgaaa 103 ||| | |||| ||||||||||||| ||||| Sbjct: 479 cccttattggggagtgaaatagaacatgaaa 509
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 410 bits (207), Expect = e-111 Identities = 423/491 (86%), Gaps = 8/491 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 502 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 559 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 560 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 619 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 620 cctaaatgacc 630 ||||||||||| Sbjct: 1016 cctaaatgacc 1026 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||| |||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 419 ggctagatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaa 478 Query: 73 cccccagtgggtagtgaaatagaacgtgaaa 103 ||| | |||| ||||||||||||| ||||| Sbjct: 479 cccttattggggagtgaaatagaacatgaaa 509
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 410 bits (207), Expect = e-111 Identities = 423/491 (86%), Gaps = 8/491 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 502 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 559 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 560 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 619 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 620 cctaaatgacc 630 ||||||||||| Sbjct: 1016 cctaaatgacc 1026 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||| |||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 419 ggctagatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaa 478 Query: 73 cccccagtgggtagtgaaatagaacgtgaaa 103 ||| | |||| ||||||||||||| ||||| Sbjct: 479 cccttattggggagtgaaatagaacatgaaa 509
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 410 bits (207), Expect = e-111 Identities = 423/491 (86%), Gaps = 8/491 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 502 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 559 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 560 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 619 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 620 cctaaatgacc 630 ||||||||||| Sbjct: 1016 cctaaatgacc 1026 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||| |||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 419 ggctagatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaa 478 Query: 73 cccccagtgggtagtgaaatagaacgtgaaa 103 ||| | |||| ||||||||||||| ||||| Sbjct: 479 cccttattggggagtgaaatagaacatgaaa 509
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 410 bits (207), Expect = e-111 Identities = 423/491 (86%), Gaps = 8/491 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 502 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 559 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 560 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 619 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 620 cctaaatgacc 630 ||||||||||| Sbjct: 1016 cctaaatgacc 1026 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||| |||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 419 ggctagatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaa 478 Query: 73 cccccagtgggtagtgaaatagaacgtgaaa 103 ||| | |||| ||||||||||||| ||||| Sbjct: 479 cccttattggggagtgaaatagaacatgaaa 509
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 410 bits (207), Expect = e-111 Identities = 291/317 (91%), Gaps = 9/317 (2%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 308 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 249 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 248 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 192 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 gcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 133 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 132 ttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaatt 78 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 77 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 18 Query: 313 aaactaagcagaggtcc 329 |||||||| ||||||| Sbjct: 17 aaactaagtggaggtcc 1
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 402 bits (203), Expect = e-109 Identities = 422/491 (85%), Gaps = 8/491 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 502 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 559 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 560 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 619 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 620 cctaaatgacc 630 ||||||||||| Sbjct: 1015 cctaaatgacc 1025 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||| |||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 418 ggctagatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaa 477 Query: 73 cccccagtgggtagtgaaatagaacgtgaaa 103 ||| | |||| ||||||||||||| ||||| Sbjct: 478 cccttattggggagtgaaatagaacatgaaa 508
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 402 bits (203), Expect = e-109 Identities = 423/491 (86%), Gaps = 9/491 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gtt-ac 834 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 502 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 559 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 560 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 619 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 620 cctaaatgacc 630 ||||||||||| Sbjct: 1015 cctaaatgacc 1025 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||| |||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 419 ggctagatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaa 478 Query: 73 cccccagtgggtagtgaaatagaacgtgaaa 103 ||| | |||| ||||||||||||| ||||| Sbjct: 479 cccttattggggagtgaaatagaacatgaaa 509
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 402 bits (203), Expect = e-109 Identities = 422/491 (85%), Gaps = 8/491 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 | || ||||||||| |||||||||||||||||||||||||||| ||||| || ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgtt-ac 835 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 502 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 559 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 560 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 619 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 620 cctaaatgacc 630 ||||||||||| Sbjct: 1016 cctaaatgacc 1026 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||| |||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 419 ggctagatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaa 478 Query: 73 cccccagtgggtagtgaaatagaacgtgaaa 103 ||| | |||| ||||||||||||| ||||| Sbjct: 479 cccttattggggagtgaaatagaacatgaaa 509
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 394 bits (199), Expect = e-106 Identities = 421/491 (85%), Gaps = 8/491 (1%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 202 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 261 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | | Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg-tatc 835 Query: 442 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 502 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 559 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 560 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 619 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 620 cctaaatgacc 630 ||||||||||| Sbjct: 1016 cctaaatgacc 1026 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||| |||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 419 ggctagatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaa 478 Query: 73 cccccagtgggtagtgaaatagaacgtgaaa 103 ||| | |||| ||||||||||||| ||||| Sbjct: 479 cccttattggggagtgaaatagaacatgaaa 509
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 389 bits (196), Expect = e-105 Identities = 332/375 (88%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 258 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 317 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 318 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 377 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 378 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 437 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 438 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 497 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 498 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 555 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 556 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 615 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 616 ggcccctaaatgacc 630 ||||||||||||||| Sbjct: 1012 ggcccctaaatgacc 1026 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||| |||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 419 ggctagatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaa 478 Query: 73 cccccagtgggtagtgaaatagaacgtgaaa 103 ||| | |||| ||||||||||||| ||||| Sbjct: 479 cccttattggggagtgaaatagaacatgaaa 509 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 201 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 202 gg 203 || Sbjct: 602 gg 603
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 387 bits (195), Expect = e-104 Identities = 195/195 (100%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 491 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 492 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 551 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 552 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 611 Query: 193 ttggttaagggaacg 207 ||||||||||||||| Sbjct: 612 ttggttaagggaacg 626
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 377 bits (190), Expect = e-101 Identities = 336/381 (88%), Gaps = 9/381 (2%) Strand = Plus / Plus Query: 144 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 203 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 204 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 261 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 |||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 745 tatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagt 804 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 805 ggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaat 864 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga- 440 |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 865 gccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgat 924 Query: 441 -ctg-gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 498 || | ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 925 gttgagctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 984 Query: 499 gaggcaaactctgaatactag 519 | ||||||| ||||||||| Sbjct: 985 gtagcaaactaagaatactag 1005 Score = 111 bits (56), Expect = 3e-21 Identities = 87/96 (90%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaaga 71 ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| Sbjct: 503 ggctaaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaaga 562 Query: 72 acccccagtgggtagtgaaatagaacgtgaaaccgt 107 ||||| ||| ||||||||||||| ||||||||| Sbjct: 563 tcccccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 613 taaggcccctaaatgaccgctcagtg 638 |||||||||| |||| ||||| |||| Sbjct: 1083 taaggcccctgaatggccgctaagtg 1108
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 377 bits (190), Expect = e-101 Identities = 193/194 (99%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 451 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 511 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 gaaattgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 571 Query: 193 ttggttaagggaac 206 |||||||||||||| Sbjct: 572 ttggttaagggaac 585
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 375 bits (189), Expect = e-100 Identities = 437/513 (85%), Gaps = 15/513 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-ga 71 |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || Sbjct: 412 ggctaaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaaga 471 Query: 72 acccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 131 ||||| | ||| ||||||| ||||| ||||||| || |||| |||||||||||||| Sbjct: 472 acccctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtgggagg 528 Query: 132 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 191 | | | |||||||||||||||||||||||||||||||||||||| || | ||||| Sbjct: 529 --acttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtgg 586 Query: 192 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga- 250 |||||||||||| ||| | ||| |||| ||||||||| ||||| |||||||| | Sbjct: 587 cttggttaaggg---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaa 642 Query: 251 -ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 309 | |||||| ||| ||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 643 atcgtcactttttagggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 702 Query: 310 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 369 | |||| ||| ||||||||||||||| ||||||||| |||| ||||||||| |||||| Sbjct: 703 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggt 762 Query: 370 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 429 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 763 taggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggc 822 Query: 430 gcagcagtt---gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgag 486 ||||| ||| ||| || |||||||||||||||||||||||||||||||| || || Sbjct: 823 gcagcggttggcgacgggctgtctaggggtaaagcactgtttcggtgcgggctacgaaag 882 Query: 487 cggtaccaaatcgaggcaaactctgaatactag 519 |||||||||||| ||||||| ||||||||| Sbjct: 883 tggtaccaaatcgtagcaaactaagaatactag 915 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 613 taaggcccctaaatgaccgctcagtg 638 ||||||||| |||| ||||| |||| Sbjct: 993 taaggccccagaatggccgctaagtg 1018
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 369 bits (186), Expect = 8e-99 Identities = 186/186 (100%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 364 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 424 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 484 Query: 193 ttggtt 198 |||||| Sbjct: 485 ttggtt 490
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 367 bits (185), Expect = 3e-98 Identities = 268/295 (90%), Gaps = 8/295 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2481 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaa 2540 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 2541 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagga 2597 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2598 gaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2657 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 252 ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| Sbjct: 2658 ctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaatt 2712 Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 307 |||||| ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2713 gtcactacttatggacccgaacctgggtgatctaaccatgaccaggatgaagctt 2767
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 337 bits (170), Expect = 3e-89 Identities = 329/379 (86%), Gaps = 6/379 (1%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 204 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 205 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 264 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 265 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 324 ||||||||||| |||||||||| |||||||||||||||||||| | | |||| || || Sbjct: 830 ggacccgaacccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggagtgga 889 Query: 325 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 384 |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 890 agtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 949 Query: 385 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tg 443 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || || Sbjct: 950 aatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtg 1009 Query: 444 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 502 | | ||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 1010 ggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtag 1069 Query: 503 caaactctgaatactagat 521 |||||| ||||||||||| Sbjct: 1070 caaactaagaatactagat 1088 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 613 taaggcccctaaatgaccgctcagtg 638 |||||||||| |||| ||||| |||| Sbjct: 1163 taaggcccctcaatggccgctaagtg 1188 Score = 111 bits (56), Expect = 3e-21 Identities = 87/96 (90%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | Sbjct: 584 ggctaaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaaga 643 Query: 73 cccccagt-gggtagtgaaatagaacgtgaaaccgt 107 ||||||| ||| ||||||||||||| ||||||||| Sbjct: 644 accccagtcggggagtgaaatagaacatgaaaccgt 679
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 337 bits (170), Expect = 3e-89 Identities = 278/311 (89%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 215 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 272 |||||||| ||||||||||||||| |||||||| || |||||| |||||||||||| Sbjct: 632 ccggagccaaagcgaaagcgagtctgaatagggcacttttgtcactttttatggacccga 691 Query: 273 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 332 ||| |||||||||| |||||||||||||||||||||| | |||| ||| |||||||||| Sbjct: 692 acccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaa 751 Query: 333 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 392 ||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 752 ccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaac 811 Query: 393 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-at 448 | ||||||||||||||||||||||||||||||||||||||| |||||| ||| | || Sbjct: 812 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctat 871 Query: 449 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 508 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 872 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaact 931 Query: 509 ctgaatactag 519 ||||||||| Sbjct: 932 aagaatactag 942 Score = 145 bits (73), Expect = 2e-31 Identities = 85/89 (95%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 613 taaggcccctaaatgaccgctcagtgata 641 ||||||||||||||| ||||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgata 1048 Score = 87.7 bits (44), Expect = 4e-14 Identities = 84/96 (87%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaaga 71 ||||||||||||||| |||||| |||||||| |||||||| |||||||||||| |||||| Sbjct: 434 ggctaaatactcctgagtgaccaatagcgaaatagtaccgcgagggaaaggtgaaaaaga 493 Query: 72 acccccagtgggtagtgaaatagaacgtgaaaccgt 107 ||||| ||| ||||||| ||||| ||||||||| Sbjct: 494 acccctgtaggggagtgaaaaagaacatgaaaccgt 529 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 202 ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgacttatagaaagtggcttggttaagg 623
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 50 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 109 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 110 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 169 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 170 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 107875
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 327 bits (165), Expect = 3e-86 Identities = 277/313 (88%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 214 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 273 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 274 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 333 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 334 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 393 |||||| ||||||| || || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 712 cgactggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaact 771 Query: 394 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctag 452 | ||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||| Sbjct: 772 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttag 831 Query: 453 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 512 |||||||||||||||||||||||||||| | | ||||||||||| || ||||||||||| Sbjct: 832 gggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctga 891 Query: 513 atactagatatga 525 |||||| |||||| Sbjct: 892 atactaaatatga 904 Score = 206 bits (104), Expect = 7e-50 Identities = 169/190 (88%), Gaps = 3/190 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 401 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaa 460 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| |||| ||||||||||| |||||||| | ||| |||||||||||||| Sbjct: 461 cccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtgggagga 517 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 || | || ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 518 aaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 577 Query: 193 ttggttaagg 202 ||||||||| Sbjct: 578 ctggttaagg 587 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 612 ctaaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||| ||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgata 1004
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 323 bits (163), Expect = 4e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Minus Query: 143 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 202 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 114870 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 114812 Query: 203 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 261 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 114811 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 114754 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 114753 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 114694 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 114693 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 114634 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 114633 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 114574 Query: 442 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 500 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 114573 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 114514 Query: 501 ggcaaactctgaatacta 518 |||||||||||||||||| Sbjct: 114513 ggcaaactctgaatacta 114496 Score = 323 bits (163), Expect = 4e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Plus Query: 143 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 202 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 2647 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 2705 Query: 203 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 261 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 2706 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 2763 Query: 262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 321 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 2764 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 2823 Query: 322 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 381 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 2824 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 2883 Query: 382 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 441 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 2884 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 2943 Query: 442 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 500 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2944 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 3003 Query: 501 ggcaaactctgaatacta 518 |||||||||||||||||| Sbjct: 3004 ggcaaactctgaatacta 3021 Score = 79.8 bits (40), Expect = 1e-11 Identities = 83/96 (86%), Gaps = 1/96 (1%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||| ||||| |||||||||||| | ||||||||||||||||||||||||||| Sbjct: 114996 ggctaaatattcctgaatgaccgatagcgcaacagtaccgtgagggaaaggtgaaaagaa 114937 Query: 73 cccccagt-gggtagtgaaatagaacgtgaaaccgt 107 |||| | ||| |||||||||||| ||||||||| Sbjct: 114936 ccccgggcaggggagtgaaatagaatatgaaaccgt 114901 Score = 79.8 bits (40), Expect = 1e-11 Identities = 83/96 (86%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||| ||||| |||||||||||| | ||||||||||||||||||||||||||| Sbjct: 2521 ggctaaatattcctgaatgaccgatagcgcaacagtaccgtgagggaaaggtgaaaagaa 2580 Query: 73 cccccagt-gggtagtgaaatagaacgtgaaaccgt 107 |||| | ||| |||||||||||| ||||||||| Sbjct: 2581 ccccgggcaggggagtgaaatagaatatgaaaccgt 2616 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 612 ctaaggcccctaaat 626 |||||||||||||| Sbjct: 114423 ttaaggcccctaaat 114409 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 612 ctaaggcccctaaat 626 |||||||||||||| Sbjct: 3094 ttaaggcccctaaat 3108
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 317 bits (160), Expect = 2e-83 Identities = 322/371 (86%), Gaps = 5/371 (1%) Strand = Plus / Plus Query: 150 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 209 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| || | Sbjct: 2385 gcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaaggtaatg-- 2441 Query: 210 acccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggac 268 | || |||||| |||||||||||||| ||||||| ||| || |||||| |||| ||| Sbjct: 2442 atttactggagccatagcgaaagcgagttttaatagagcgtttagtcactatttatagac 2501 Query: 269 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 328 ||||||| |||||||||| ||||| ||||| |||||||| | | ||||||| |||| | Sbjct: 2502 ccgaacccgggtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcc 2561 Query: 329 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 388 |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| || Sbjct: 2562 cgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatc 2621 Query: 389 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggaca 447 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct: 2622 gaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataa 2681 Query: 448 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 507 | |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 2682 tttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaac 2741 Query: 508 tctgaatacta 518 ||||||||||| Sbjct: 2742 tctgaatacta 2752 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 625 at 626 || Sbjct: 2838 at 2839 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 69 ||||||||| ||||| |||||||||||| | |||||||||||||||||||||||| Sbjct: 2249 ggctaaatattcctgaatgaccgatagcgtaacagtaccgtgagggaaaggtgaaaa 2305
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 315 bits (159), Expect = 1e-82 Identities = 174/179 (97%) Strand = Plus / Plus Query: 207 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 266 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 267 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 326 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 327 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 385 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 2e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 323 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 382 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 383 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 442 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 443 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 502 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 503 caaactctgaatactagatat 523 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 250 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 309 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 310 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 369 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 370 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 429 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 430 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 486 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 487 cggtaccaaatcgaggcaaactctgaatactaga 520 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 613 taaggcccctaaatgaccgctcagtg 638 ||||||||| ||||||||||| |||| Sbjct: 1150 taaggccccaaaatgaccgctaagtg 1175 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 202 ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| Sbjct: 693 tgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaagg 750 Score = 87.7 bits (44), Expect = 4e-14 Identities = 84/96 (87%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaaga 71 ||||||||||| ||| |||||||||| ||| ||||||||||||||||||||| |||||| Sbjct: 547 ggctaaatacttttggatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaaaga 606 Query: 72 acccccagtgggtagtgaaatagaacgtgaaaccgt 107 ||||| ||| ||||||||||||| ||||||||| Sbjct: 607 acccctgtaggggagtgaaatagaacatgaaaccgt 642
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 266 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 325 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 326 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 385 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 386 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 444 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 445 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 503 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 504 aaactctgaatactagatatgac 526 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||| | |||||||||| ||| |||||||||||||||| ||||||||||| Sbjct: 6108 ggctaaatactcctagatgaccgatagtgaaatagtaccgtgagggaatggtgaaaagaa 6167 Query: 73 cccc 76 |||| Sbjct: 6168 cccc 6171 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 555 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 614 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 615 aggcccctaaatg 627 ||||||| ||||| Sbjct: 6706 aggccccaaaatg 6718 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 144 ctgaccgcgtgcctgttgaagaatgagccggcgact 179 |||||||| ||||||||||||||||||||||||||| Sbjct: 6234 ctgaccgcatgcctgttgaagaatgagccggcgact 6269 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 219 agccgtagcgaaagcgagtcttaatagggcgat 251 ||||||||| ||||||||||| ||||||||||| Sbjct: 6304 agccgtagcaaaagcgagtctgaatagggcgat 6336
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 299 bits (151), Expect = 6e-78 Identities = 151/151 (100%) Strand = Plus / Minus Query: 491 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 551 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 610 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 611 gctaaggcccctaaatgaccgctcagtgata 641 ||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgata 369
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 266 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 325 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 326 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 385 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 386 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 444 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 445 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 503 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 504 aaactctgaatactagatatgac 526 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||| | |||||||||| ||| |||||||||||||||| ||||||||||| Sbjct: 3171 ggctaaatactcctagatgaccgatagtgaaatagtaccgtgagggaatggtgaaaagaa 3230 Query: 73 cccc 76 |||| Sbjct: 3231 cccc 3234 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 555 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 614 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 615 aggcccctaaatg 627 ||||||| ||||| Sbjct: 3769 aggccccaaaatg 3781 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 144 ctgaccgcgtgcctgttgaagaatgagccggcgact 179 |||||||| ||||||||||||||||||||||||||| Sbjct: 3297 ctgaccgcatgcctgttgaagaatgagccggcgact 3332 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 219 agccgtagcgaaagcgagtcttaatagggcgat 251 ||||||||| ||||||||||| ||||||||||| Sbjct: 3367 agccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 266 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 325 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 326 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 385 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 386 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 444 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 445 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 503 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 504 aaactctgaatactagatatgac 526 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||| | |||||||||| ||| |||||||||||||||| ||||||||||| Sbjct: 459 ggctaaatactcctagatgaccgatagtgaaatagtaccgtgagggaatggtgaaaagaa 518 Query: 73 cccc 76 |||| Sbjct: 519 cccc 522 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 555 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 614 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 615 aggcccctaaatg 627 ||||||| ||||| Sbjct: 1057 aggccccaaaatg 1069 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 144 ctgaccgcgtgcctgttgaagaatgagccggcgact 179 |||||||| ||||||||||||||||||||||||||| Sbjct: 585 ctgaccgcatgcctgttgaagaatgagccggcgact 620 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 219 agccgtagcgaaagcgagtcttaatagggcgat 251 ||||||||| ||||||||||| ||||||||||| Sbjct: 655 agccgtagcaaaagcgagtctgaatagggcgat 687
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 295 bits (149), Expect = 9e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 204 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 192429 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 192488 Query: 205 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 264 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 192489 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 192543 Query: 265 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 324 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 192544 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 192603 Query: 325 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 384 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 192604 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 192663 Query: 385 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 442 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 192664 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 192723 Query: 443 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 192724 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 192783 Query: 502 gcaaactctgaatacta 518 ||||||| |||||||| Sbjct: 192784 gcaaactaagaatacta 192800 Score = 295 bits (149), Expect = 9e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Minus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 204 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 144353 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 144294 Query: 205 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 264 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 144293 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 144239 Query: 265 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 324 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 144238 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 144179 Query: 325 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 384 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 144178 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 144119 Query: 385 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 442 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 144118 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 144059 Query: 443 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 144058 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 143999 Query: 502 gcaaactctgaatacta 518 ||||||| |||||||| Sbjct: 143998 gcaaactaagaatacta 143982 Score = 105 bits (53), Expect = 2e-19 Identities = 89/97 (91%), Gaps = 3/97 (3%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-aga 71 ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 192307 ggctaaatactcctgaatgaccgatagtgaagtagtaccgtgagggaaaggtgaaacaga 192366 Query: 72 acccccagt-gggtagtgaaatagaacgtgaaaccgt 107 | ||||||| ||| ||||||||||||| ||||||||| Sbjct: 192367 a-ccccagtcggggagtgaaatagaacatgaaaccgt 192402 Score = 105 bits (53), Expect = 2e-19 Identities = 89/97 (91%), Gaps = 3/97 (3%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-aga 71 ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 144475 ggctaaatactcctgaatgaccgatagtgaagtagtaccgtgagggaaaggtgaaacaga 144416 Query: 72 acccccagt-gggtagtgaaatagaacgtgaaaccgt 107 | ||||||| ||| ||||||||||||| ||||||||| Sbjct: 144415 a-ccccagtcggggagtgaaatagaacatgaaaccgt 144380 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 625 atgaccgctcagtg 638 ||| ||||| |||| Sbjct: 192890 atggccgctaagtg 192903 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 625 atgaccgctcagtg 638 ||| ||||| |||| Sbjct: 143892 atggccgctaagtg 143879
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 289 bits (146), Expect = 6e-75 Identities = 263/302 (87%) Strand = Plus / Plus Query: 216 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 275 ||||||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| Sbjct: 2189 cggagccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacc 2248 Query: 276 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 335 || ||||||| |||| |||||||||||||| | | | ||| || ||||||||||||| Sbjct: 2249 cggatgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccg 2308 Query: 336 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 395 |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 2309 actgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccg 2368 Query: 396 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 455 ||||||||||||||||||||||||||||||||||||||| ||| | | | | |||| Sbjct: 2369 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttggggg 2428 Query: 456 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 515 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 2429 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaata 2488 Query: 516 ct 517 || Sbjct: 2489 ct 2490 Score = 99.6 bits (50), Expect = 1e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 613 taaggcccctaaat 626 |||||||||||||| Sbjct: 2565 taaggcccctaaat 2578 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||| |||| | | |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 1994 ggctaaatattcctagataaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaa 2053 Query: 73 cccccagtgggtagtgaaatagaacgtgaaacc 105 |||| | ||| ||||||||||||| ||||||| Sbjct: 2054 ccccgtgaggggagtgaaatagaacatgaaacc 2086 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 143 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2121 tctgacctcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2170
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 253 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 312 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 313 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 372 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 373 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 432 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 433 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 489 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 490 taccaaatcgaggcaaactctgaatactaga 520 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 147 bits (74), Expect = 5e-32 Identities = 83/86 (96%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 613 taaggcccctaaatgaccgctcagtg 638 ||||||||||||||||||||| |||| Sbjct: 1026 taaggcccctaaatgaccgctaagtg 1051 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 144 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 200 |||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 571 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaa 627 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 69 ||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 444 ggctaaatacttttggatgaccgatagcgaaatagtaccgtgagggaaaggtgaaaa 500
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 285 bits (144), Expect = 9e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 215 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 272 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 273 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 332 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 740 Query: 333 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 392 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 741 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 800 Query: 393 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 451 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 801 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 860 Query: 452 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 511 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 861 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 920 Query: 512 aatactagata 522 ||||||||||| Sbjct: 921 aatactagata 931 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 612 ctaaggcccctaaatga 628 |||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatga 1020 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 428 ggctaaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaa 487 Query: 73 cccccagtgggtagtgaaatagaacgtgaaacc 105 |||| ||| ||||||||||||| ||||||| Sbjct: 488 cccctgtaggggagtgaaatagaacatgaaacc 520 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 144 ctgaccgcgtgcctgttgaagaatgagccggcgact 179 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 285 bits (144), Expect = 9e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 215 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 272 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 273 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 332 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 25549 Query: 333 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 392 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 25550 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 25609 Query: 393 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 451 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 25610 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 25669 Query: 452 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 511 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 25670 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 25729 Query: 512 aatactagata 522 ||||||||||| Sbjct: 25730 aatactagata 25740 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 612 ctaaggcccctaaatga 628 |||||||||| |||||| Sbjct: 25813 ctaaggccccaaaatga 25829 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 25237 ggctaaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaa 25296 Query: 73 cccccagtgggtagtgaaatagaacgtgaaacc 105 |||| ||| ||||||||||||| ||||||| Sbjct: 25297 cccctgtaggggagtgaaatagaacatgaaacc 25329 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 144 ctgaccgcgtgcctgttgaagaatgagccggcgact 179 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 285 bits (144), Expect = 9e-74 Identities = 424/509 (83%), Gaps = 10/509 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||| ||||| |||||||||| ||| ||||||| || |||||||||||||| Sbjct: 2194 ggctaaatattcctgaatgaccgatagtgaaacagtaccgcgatttaaaggtgaaaagaa 2253 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||| | ||| ||||||||||||| ||||||||| |||| |||||||||||||| Sbjct: 2254 ccccgggaggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggagga 2310 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | | | ||||||| ||||| ||||||||||||||||||||||| || |||||||| Sbjct: 2311 cgacttaacgtctgacctcgtgcatgttgaagaatgagccggcgacttgtatgcagtggc 2370 Query: 193 ttggttaagg-gaacggaacccaccggagccgtagcgaaagcgagtcttaatagg-gcga 250 |||||||| | | ||| ||||||||| ||| ||||||||| ||| ||| | ||| Sbjct: 2371 a-ggttaaggcgtaaagaat--accggagccatagtgaaagcgag-cttgataagagcgt 2426 Query: 251 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 310 | ||||||| ||| |||||||||| || ||||||| |||| ||||| |||||||| | Sbjct: 2427 tcgtcactgtttacagacccgaacccggatgatctagtcatggccagggtgaagcttagg 2486 Query: 311 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 370 | | |||||| ||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 2487 taacactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgatt 2546 Query: 371 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||| Sbjct: 2547 aggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcg 2606 Query: 431 cagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcgg 489 |||| ||||| | | | ||||||||||||||||||||||| ||||||| | ||||| Sbjct: 2607 cagcggttgatgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcgg 2666 Query: 490 taccaaatcgaggcaaactctgaatacta 518 ||||||||||||||||||||||||||||| Sbjct: 2667 taccaaatcgaggcaaactctgaatacta 2695 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 613 taaggcccctaaat 626 |||||||||||||| Sbjct: 2769 taaggcccctaaat 2782
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 283 bits (143), Expect = 3e-73 Identities = 264/303 (87%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 215 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 274 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 275 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 334 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 335 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 394 ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaaccc 428 Query: 395 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag-g 453 ||||||||||||||||||||||||| ||| ||||||||| || | |||||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaacgattaaatctaggg 488 Query: 454 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 513 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| Sbjct: 489 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaa 548 Query: 514 tac 516 ||| Sbjct: 549 tac 551 Score = 125 bits (63), Expect = 2e-25 Identities = 87/95 (91%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 55 ggctaaatactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaa 114 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgt 107 |||| | ||| ||||||||||||| ||||||||| Sbjct: 115 ccccgggaggggagtgaaatagaacatgaaaccgt 149 Score = 87.7 bits (44), Expect = 4e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 612 ctaaggcccctaaatg 627 |||||| ||| ||||| Sbjct: 626 ctaaggtcccaaaatg 641 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 152 gtgcctgttgaagaatgagccggcgactcatagg 185 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 219 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 278 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 279 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 338 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 339 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 398 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 399 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 455 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 456 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 515 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 934 Query: 516 ctaga 520 ||||| Sbjct: 935 ctaga 939 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 613 taaggcccctaaatgaccgctcagtg 638 ||||||||||||||| ||||| |||| Sbjct: 1017 taaggcccctaaatggccgctaagtg 1042 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 200 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 618 Score = 79.8 bits (40), Expect = 1e-11 Identities = 83/96 (86%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-aga 71 |||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||| ||| Sbjct: 426 ggctaaatactcctaagtgaccgatagtgaacaagtaccgcgagggaaaggtgaaataga 485 Query: 72 acccccagtgggtagtgaaatagaacgtgaaaccgt 107 ||||| ||| ||||||||||||| ||||||||| Sbjct: 486 acccctgaaggggagtgaaatagaacatgaaaccgt 521
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 3e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 225 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 283 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 284 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 343 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 344 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 403 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 404 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 460 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 461 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 517 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 613 taaggcccctaaat 626 |||||||||||||| Sbjct: 995 taaggcccctaaat 1008 Score = 95.6 bits (48), Expect = 2e-16 Identities = 85/96 (88%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaaga 71 ||||||||||||||| || |||||||| |||||||||||| |||||||||||| |||||| Sbjct: 415 ggctaaatactcctgagtcaccgatagtgaagtagtaccgcgagggaaaggtgaaaaaga 474 Query: 72 acccccagtgggtagtgaaatagaacgtgaaaccgt 107 ||||| ||| ||||||||||||| ||||||||| Sbjct: 475 acccctgcaggggagtgaaatagaacatgaaaccgt 510 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 185 ||||||||| ||||||||||||||| ||||||||| ||||| Sbjct: 543 tgaccgcgttcctgttgaagaatgaaccggcgacttatagg 583
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 219 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 278 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 279 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 338 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 339 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 398 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 399 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 455 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 456 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 515 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 2816 Query: 516 ctaga 520 ||||| Sbjct: 2817 ctaga 2821 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 613 taaggcccctaaatgaccgctcagtg 638 ||||||||||||||| ||||| |||| Sbjct: 2899 taaggcccctaaatggccgctaagtg 2924 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 142 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 200 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2442 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 2500 Score = 79.8 bits (40), Expect = 1e-11 Identities = 83/96 (86%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-aga 71 |||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||| ||| Sbjct: 2307 ggctaaatactcctaagtgaccgatagtgaacaagtaccgcgagggaaaggtgaaataga 2366 Query: 72 acccccagtgggtagtgaaatagaacgtgaaaccgt 107 ||||| ||| ||||||||||||| ||||||||| Sbjct: 2367 acccctgaaggggagtgaaatagaacatgaaaccgt 2402
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 228 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 287 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 288 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 347 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 348 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 407 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 408 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 466 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 467 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 228 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 287 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 288 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 347 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 348 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 407 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 408 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 466 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 467 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 99.6 bits (50), Expect = 1e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 613 taaggcccctaaat 626 |||||||||||||| Sbjct: 189932 taaggcccctaaat 189945 Score = 99.6 bits (50), Expect = 1e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 613 taaggcccctaaat 626 |||||||||||||| Sbjct: 151359 taaggcccctaaat 151372 Score = 93.7 bits (47), Expect = 7e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||| | ||| |||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 189359 ggctaaatattactgaatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaa 189418 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgt 107 |||| | ||| ||||||||||||| |||| |||| Sbjct: 189419 ccccgggaggggagtgaaatagaacatgaacccgt 189453 Score = 93.7 bits (47), Expect = 7e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||| | ||| |||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 150786 ggctaaatattactgaatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaa 150845 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgt 107 |||| | ||| ||||||||||||| |||| |||| Sbjct: 150846 ccccgggaggggagtgaaatagaacatgaacccgt 150880 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 151 cgtgcctgttgaagaatgagccggcgactcatag 184 ||||| ||||||||||||||||||||||| |||| Sbjct: 189494 cgtgcatgttgaagaatgagccggcgacttatag 189527 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 151 cgtgcctgttgaagaatgagccggcgactcatag 184 ||||| ||||||||||||||||||||||| |||| Sbjct: 150921 cgtgcatgttgaagaatgagccggcgacttatag 150954
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 280 bits (141), Expect = 5e-72 Identities = 321/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 204 ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 598 tgaccgcatgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggca 657 Query: 205 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 264 | || || |||||| ||||||||| ||||| ||||||||| |||||||| |||| Sbjct: 658 aa--aagcc---ggagccaaagcgaaagcaagtctgaatagggcgcttgtcactttttat 712 Query: 265 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 324 ||||||||||||| |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 713 ggacccgaacctgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 772 Query: 325 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 384 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 773 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 832 Query: 385 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 442 | |||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 833 agtcgaactcagagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 892 Query: 443 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 501 || | | ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 893 gggctagttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 952 Query: 502 gcaaactctgaatacta 518 ||||||| |||||||| Sbjct: 953 gcaaactaagaatacta 969 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/97 (90%), Gaps = 3/97 (3%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-aga 71 ||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||| Sbjct: 476 ggctaaatactcctgaatgaccgatagcgaaatagtaccgtgagggaaaggtgaaacaga 535 Query: 72 acccccagt-gggtagtgaaatagaacgtgaaaccgt 107 | ||||||| ||| ||||||| ||||| ||||||||| Sbjct: 536 a-ccccagtcggggagtgaaaaagaacatgaaaccgt 571 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 625 atgaccgctcagtg 638 ||| ||||| |||| Sbjct: 1059 atggccgctaagtg 1072
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 278 bits (140), Expect = 2e-71 Identities = 315/369 (85%), Gaps = 7/369 (1%) Strand = Plus / Plus Query: 152 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 211 |||| ||||||||||||||||||||||| ||| | |||||| |||||||| || | | Sbjct: 188572 gtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggtaaagaat- 188629 Query: 212 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 271 |||| |||| || ||||||||| | ||||| ||| | |||||| |||| |||||| Sbjct: 188630 --accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttatagacccg 188687 Query: 272 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 331 |||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||||||||| Sbjct: 188688 aacccggatgatctagccatggccagggtgaagcttaggtaacactaagtggaggtccga 188747 Query: 332 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 391 ||||||| |||||||| ||| |||||||||||||||| |||||||||||||||| ||||| Sbjct: 188748 accgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgccaatcgaa 188807 Query: 392 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggacatc 449 || ||||||||||||||||||||||||| ||||||||||||| ||||| || | | Sbjct: 188808 tccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct-taaact 188866 Query: 450 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 509 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 188867 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 188926 Query: 510 tgaatacta 518 ||||||||| Sbjct: 188927 tgaatacta 188935 Score = 276 bits (139), Expect = 8e-71 Identities = 320/376 (85%), Gaps = 7/376 (1%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 204 ||||| ||||| ||||||||||||||||||||||| ||| | |||||| |||||||| | Sbjct: 150122 tgacctcgtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggta 150180 Query: 205 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 264 | | | |||| |||| || ||||||||| | ||||| ||| | |||||| |||| Sbjct: 150181 aagaat---accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttat 150237 Query: 265 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 324 |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| || Sbjct: 150238 agacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaagtgga 150297 Query: 325 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 384 ||||||| |||||| |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 150298 ggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgcc 150357 Query: 385 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 442 | ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| || Sbjct: 150358 aatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct 150417 Query: 443 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 502 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 150418 -taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagg 150476 Query: 503 caaactctgaatacta 518 |||||||||||||||| Sbjct: 150477 caaactctgaatacta 150492 Score = 93.7 bits (47), Expect = 7e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||| | ||| |||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 188436 ggctaaatattactgaatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaa 188495 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgt 107 |||| | ||| ||||||||||||| |||| |||| Sbjct: 188496 ccccgggaggggagtgaaatagaacatgaacccgt 188530 Score = 93.7 bits (47), Expect = 7e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||| | ||| |||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 149993 ggctaaatattactgaatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaa 150052 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgt 107 |||| | ||| ||||||||||||| |||| |||| Sbjct: 150053 ccccgggaggggagtgaaatagaacatgaacccgt 150087 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 555 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 614 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 615 aggcccctaaat 626 ||||||| |||| Sbjct: 189011 aggccccaaaat 189022 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 555 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 614 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 615 aggcccctaaat 626 ||||||| |||| Sbjct: 150568 aggccccaaaat 150579
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Minus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 5974 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 5915 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 5914 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 5855 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 5854 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 5795 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 5794 agctagctggttctccccgaaatacgttgaggcg 5761 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||| ||| ||||||||||||| | ||||||| ||||||||||||||||||| Sbjct: 6171 ggctaagtactactgtgtgaccgatagcgcaacagtaccgcgagggaaaggtgaaaagaa 6112 Query: 73 cccccagtgggtagtgaaatagaacgtgaaacc 105 |||| | ||| ||||||||||||| ||||||| Sbjct: 6111 ccccgggaggggagtgaaatagaacatgaaacc 6079 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 6041 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 5994 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 5586 Query: 625 at 626 || Sbjct: 5585 at 5584
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 211798 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 211857 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 211858 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 211917 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 211918 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 211977 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 211978 agctagctggttctccccgaaatacgttgaggcg 212011 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||| ||| ||||||||||||| | ||||||| ||||||||||||||||||| Sbjct: 211601 ggctaagtactactgtgtgaccgatagcgcaacagtaccgcgagggaaaggtgaaaagaa 211660 Query: 73 cccccagtgggtagtgaaatagaacgtgaaacc 105 |||| | ||| ||||||||||||| ||||||| Sbjct: 211661 ccccgggaggggagtgaaatagaacatgaaacc 211693 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 211731 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 211778 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 212186 Query: 625 at 626 || Sbjct: 212187 at 212188
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||||||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 289 ggctaagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaa 348 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 349 ccccgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 261 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 320 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 321 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 380 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 381 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 440 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 441 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 497 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 498 cgaggcaaactctgaatact 517 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 123 bits (62), Expect = 8e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 613 taaggcccctaaat 626 |||||||||||||| Sbjct: 1025 taaggcccctaaat 1038 Score = 87.7 bits (44), Expect = 4e-14 Identities = 84/96 (87%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaaga 71 ||||||||||||||| || |||||||| |||||||||||| |||||||||||| |||||| Sbjct: 438 ggctaaatactcctgagtcaccgatagtgaagtagtaccgcgagggaaaggtgaaaaaga 497 Query: 72 acccccagtgggtagtgaaatagaacgtgaaaccgt 107 ||||| ||| ||||||| ||||| ||||||||| Sbjct: 498 acccctgtaggggagtgaaaaagaacatgaaaccgt 533 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 144 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 570 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 618
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 261 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 320 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 321 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 380 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 381 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 440 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 441 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 497 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 498 cgaggcaaactctgaatact 517 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 123 bits (62), Expect = 8e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 613 taaggcccctaaat 626 |||||||||||||| Sbjct: 2763 taaggcccctaaat 2776 Score = 87.7 bits (44), Expect = 4e-14 Identities = 84/96 (87%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaaga 71 ||||||||||||||| || |||||||| |||||||||||| |||||||||||| |||||| Sbjct: 2176 ggctaaatactcctgagtcaccgatagtgaagtagtaccgcgagggaaaggtgaaaaaga 2235 Query: 72 acccccagtgggtagtgaaatagaacgtgaaaccgt 107 ||||| ||| ||||||| ||||| ||||||||| Sbjct: 2236 acccctgtaggggagtgaaaaagaacatgaaaccgt 2271 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 144 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 2308 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 2356
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 270 bits (136), Expect = 5e-69 Identities = 251/286 (87%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 204 |||||| |||||||||||||||||||||||||||| ||||| | |||| ||||||||| Sbjct: 2776 tgaccgtgtgcctgttgaagaatgagccggcgacttataggtactggca-ggttaaggg- 2833 Query: 205 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 264 |||| | |||||||| ||||||||||||||| ||||||||||| |||| | |||| Sbjct: 2834 --ggaaatc-ccggagccacagcgaaagcgagtctgaatagggcgatggtcagtatttat 2890 Query: 265 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 324 |||||||||| |||||||||| ||||| |||||||||||||||| ||| || | | || Sbjct: 2891 agacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgataccacgtgga 2950 Query: 325 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 384 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2951 ggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcc 3010 Query: 385 actcgaacccagagctagctggttctccccgaaatgcgttgaggcg 430 | |||||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 3011 aatcgaacccggagctagctggttctccccgaaatacgtttaggcg 3056 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||||||| ||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 2647 ggctaagtactcctgtgtgaccgatagtgaagcagtaccgcgagggaaaggtgaaaagaa 2706 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 2707 ccccgggaggggagtgaaatagaacatgaaaccgtg 2742 Score = 91.7 bits (46), Expect = 3e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 452 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 510 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 511 gaatac 516 |||||| Sbjct: 3139 gaatac 3144 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 625 atgaccgctcagtgata 641 || | |||| ||||||| Sbjct: 3232 ataagcgctaagtgata 3248
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 215 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 269 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 270 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 329 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 330 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 389 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 390 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 446 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 447 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 505 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 506 actctgaatactagata 522 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 144 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 202 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 77.8 bits (39), Expect = 4e-11 Identities = 82/95 (86%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| | | ||||||| ||||||| ||||| ||||| Sbjct: 566 ggctaaatactcctgggtgaccgatagtgca-aagtaccgcgagggaatggtgataagaa 624 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgt 107 |||| ||| ||||||||||||| ||||||||| Sbjct: 625 cccctgtaggggagtgaaatagaacatgaaaccgt 659 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 587 agagggaaacagcccggatcaccagctaaggcccctaaatg 627 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 215 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 269 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 270 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 329 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 330 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 389 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 390 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 446 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 447 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 505 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 506 actctgaatactagata 522 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 144 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 202 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 77.8 bits (39), Expect = 4e-11 Identities = 82/95 (86%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| | | ||||||| ||||||| ||||| ||||| Sbjct: 566 ggctaaatactcctgggtgaccgatagtgca-aagtaccgcgagggaatggtgataagaa 624 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgt 107 |||| ||| ||||||||||||| ||||||||| Sbjct: 625 cccctgtaggggagtgaaatagaacatgaaaccgt 659 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 587 agagggaaacagcccggatcaccagctaaggcccctaaatg 627 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 8e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 228 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 287 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 288 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 347 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 348 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 407 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 408 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 464 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 465 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 129 bits (65), Expect = 1e-26 Identities = 148/175 (84%), Gaps = 3/175 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||| Sbjct: 55 ggctaaatactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaa 114 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||| ||| ||||||||||||| |||||||| | |||| |||||||||||||| Sbjct: 115 ccccggaaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggagga 171 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 187 | | | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 172 ctatttaaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226 Score = 91.7 bits (46), Expect = 3e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 612 ctaaggcccctaaatgaccgctcagtgata 641 |||||| ||| |||| | |||| ||||||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgata 655
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 266 bits (134), Expect = 8e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 215 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 274 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 137118 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 137177 Query: 275 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 334 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 137178 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 137237 Query: 335 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 394 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 137238 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 137297 Query: 395 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 451 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 137298 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 137357 Query: 452 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 511 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 137358 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 137417 Query: 512 aatactag 519 |||||||| Sbjct: 137418 aatactag 137425 Score = 266 bits (134), Expect = 8e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Minus Query: 215 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 274 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 48426 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 48367 Query: 275 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 334 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 48366 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 48307 Query: 335 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 394 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 48306 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 48247 Query: 395 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 451 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 48246 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 48187 Query: 452 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 511 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 48186 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 48127 Query: 512 aatactag 519 |||||||| Sbjct: 48126 aatactag 48119 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 613 taaggcccctaaatg 627 ||||||||||||||| Sbjct: 137502 taaggcccctaaatg 137516 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 613 taaggcccctaaatg 627 ||||||||||||||| Sbjct: 48042 taaggcccctaaatg 48028 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/95 (90%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-aga 71 |||||||||||| |||||||||||||| ||| |||||||||||||||||||||||| ||| Sbjct: 136922 ggctaaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaataga 136981 Query: 72 acccccagt-gggtagtgaaatagaacgtgaaacc 105 | ||||||| ||| |||| |||||||| ||||||| Sbjct: 136982 a-ccccagtaggggagtgcaatagaacatgaaacc 137015 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/95 (90%), Gaps = 3/95 (3%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-aga 71 |||||||||||| |||||||||||||| ||| |||||||||||||||||||||||| ||| Sbjct: 48622 ggctaaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaataga 48563 Query: 72 acccccagt-gggtagtgaaatagaacgtgaaacc 105 | ||||||| ||| |||| |||||||| ||||||| Sbjct: 48562 a-ccccagtaggggagtgcaatagaacatgaaacc 48529 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 202 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 137110 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 202 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 48434
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 266 bits (134), Expect = 8e-68 Identities = 267/310 (86%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 214 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 273 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 274 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 333 || |||||||||| ||||| |||||| ||||||||| |||||| | || |||||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaac 743 Query: 334 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 393 |||| || |||||||| || |||||||||||||||||||||||||||| ||| |||||| Sbjct: 744 cgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaact 803 Query: 394 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca- 447 | ||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 804 cggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcag 863 Query: 448 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 507 ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 864 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaac 923 Query: 508 tctgaatact 517 | ||||||| Sbjct: 924 taagaatact 933 Score = 161 bits (81), Expect = 3e-36 Identities = 164/190 (86%), Gaps = 5/190 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 433 ggctacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaa 492 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 ||||| ||| ||||||| ||| | |||||||| || ||| ||||||||||||||| Sbjct: 493 cccccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggaggg 549 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | ||| | |||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 550 g--cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggc 607 Query: 193 ttggttaagg 202 |||||||||| Sbjct: 608 ttggttaagg 617 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 549 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 608 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 609 cagctaaggcccctaaatgaccgctcagtgata 641 ||||||||||||| |||| ||||||||||||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgata 1040
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 266 bits (134), Expect = 8e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||||||||||||| |||||| || |||| |||||||||| Sbjct: 356101 ggagccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccc 356160 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 ||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 356161 tggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 356220 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 356221 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccagg 356280 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 356281 agctagctggttctccccgaaatacgttgaggcg 356314 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||||||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 355905 ggctaagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaa 355964 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 355965 ccccgggaggggagtgaaatagaacatgaaaccgtg 356000 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 356034 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 356081 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcga 500 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386 Score = 44.1 bits (22), Expect = 0.56 Identities = 52/62 (83%) Strand = Plus / Plus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| || |||| ||||||||||||| || | |||||||||| ||| || Sbjct: 356430 tgggggataagctccacactcgaaagggaaacagcccagaccgccagctaaggtcccaaa 356489 Query: 625 at 626 || Sbjct: 356490 at 356491
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 264 bits (133), Expect = 3e-67 Identities = 133/133 (100%) Strand = Plus / Plus Query: 509 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 569 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 629 ccgctcagtgata 641 ||||||||||||| Sbjct: 121 ccgctcagtgata 133
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2138158 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 2138099 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2138098 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2138039 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2138038 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 2137979 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 2137978 agctagctggttctccccgaaatacgttgaggcg 2137945 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 476702 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 476761 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 476762 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 476821 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 476822 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 476881 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 476882 agctagctggttctccccgaaatacgttgaggcg 476915 Score = 103 bits (52), Expect = 7e-19 Identities = 85/96 (88%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||| ||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 2138354 ggctaagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaa 2138295 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 2138294 ccccgggaggggagtgaaatagaacatgaaaccgtg 2138259 Score = 103 bits (52), Expect = 7e-19 Identities = 85/96 (88%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||| ||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 476506 ggctaagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaa 476565 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 476566 ccccgggaggggagtgaaatagaacatgaaaccgtg 476601 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2138225 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2138178 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 476635 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 476682 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 625 at 626 || Sbjct: 2137769 at 2137768 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 625 at 626 || Sbjct: 477091 at 477092
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 2e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 228 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 287 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 288 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 347 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 348 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 407 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 408 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 464 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 465 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||| Sbjct: 55 ggctaaatactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaa 114 Query: 73 cccccagtgggtagtgaaatagaacgtgaaacc 105 |||| ||| ||||||||||||| ||||||| Sbjct: 115 ccccggaaggggagtgaaatagaacatgaaacc 147 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 612 ctaaggcccctaaat 626 |||||| ||| |||| Sbjct: 626 ctaaggtccccaaat 640 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 187 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 258 bits (130), Expect = 2e-65 Identities = 253/292 (86%), Gaps = 4/292 (1%) Strand = Plus / Plus Query: 143 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 202 |||||| |||||||||||||||||||||||||||||| ||| | |||||| |||||||| Sbjct: 2303 tctgactgcgtgcctgttgaagaatgagccggcgacttataagtagtggca-ggttaagg 2361 Query: 203 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 262 | | | ||||||||| ||| ||||||||| || ||||||||| ||||||||| || Sbjct: 2362 tagagaat---accggagccatagtgaaagcgagcctgaatagggcgtttgtcactggtt 2418 Query: 263 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 322 || |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| Sbjct: 2419 atagacccgaacccggatgatctaaccatggccaggttgaagcttaggtaatactaagtg 2478 Query: 323 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 382 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2479 gaggaccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 2538 Query: 383 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 434 ||| ||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2539 ccaatcgaattcggagctagctggttctccccgaaatgcgtttaggcgcagc 2590 Score = 89.7 bits (45), Expect = 1e-14 Identities = 82/93 (88%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||| ||||| |||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 2176 ggctaaatattcctgaatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaa 2235 Query: 73 cccccagtgggtagtgaaatagaacgtgaaacc 105 |||| | ||| ||||||| ||||| ||||||| Sbjct: 2236 ccccgggaggggagtgaaa-agaacatgaaacc 2267 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 554 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 613 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 614 aaggcccctaaat 626 ||||||||||||| Sbjct: 2751 aaggcccctaaat 2763
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 339409 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 339350 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 339349 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 339290 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 339289 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 339230 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 339229 agctagctggttctccccgaaatacgttgaggcg 339196 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 132469 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 132410 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 132409 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 132350 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 132349 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 132290 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 132289 agctagctggttctccccgaaatacgttgaggcg 132256 Score = 103 bits (52), Expect = 7e-19 Identities = 85/96 (88%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||| ||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 339605 ggctaagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaa 339546 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 339545 ccccgggaggggagtgaaatagaacatgaaaccgtg 339510 Score = 103 bits (52), Expect = 7e-19 Identities = 85/96 (88%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||| ||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 132665 ggctaagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaa 132606 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 132605 ccccgggaggggagtgaaatagaacatgaaaccgtg 132570 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 339476 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 339429 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 132536 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 132489 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 339021 Query: 625 at 626 || Sbjct: 339020 at 339019 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 132081 Query: 625 at 626 || Sbjct: 132080 at 132079
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||||||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 289 ggctaagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaa 348 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 349 ccccgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||||||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 289 ggctaagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaa 348 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 349 ccccgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||||||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 289 ggctaagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaa 348 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 349 ccccgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||||||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 289 ggctaagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaa 348 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 349 ccccgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||||||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 289 ggctaagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaa 348 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 349 ccccgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 258 bits (130), Expect = 2e-65 Identities = 271/312 (86%), Gaps = 7/312 (2%) Strand = Plus / Plus Query: 219 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 276 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 | ||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | | Sbjct: 776 ccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcgg 835 Query: 397 agctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctagg 453 |||||||||| ||||||||||||||||||||||||||| || || || || |||| || Sbjct: 836 agctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttgg 894 Query: 454 ggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 512 |||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| || Sbjct: 895 ggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcaga 954 Query: 513 atactagatatg 524 |||| ||||||| Sbjct: 955 atacaagatatg 966 Score = 117 bits (59), Expect = 5e-23 Identities = 86/95 (90%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 459 ggctaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaa 518 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgt 107 |||| |||| ||||||||||||| ||||||||| Sbjct: 519 cccctgttggggagtgaaatagaacatgaaaccgt 553 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 613 taaggcccctaaatg 627 ||||||||||||||| Sbjct: 1038 taaggcccctaaatg 1052 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 203 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 256 bits (129), Expect = 8e-65 Identities = 351/421 (83%), Gaps = 13/421 (3%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||| ||||||||||||||| |||||||| |||||||||| |||||||| Sbjct: 428 ggctaaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaa 487 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 ||||| | ||| |||||||||||||| |||||||| | ||| |||||||||||| | Sbjct: 488 cccccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--g 542 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 ||| ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 543 gaagaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 601 Query: 193 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc---g 249 |||||||||| | | | |||||||| |||||||||||||||| |||||||| Sbjct: 602 ttggttaaggaa----attcatccggagccatagcgaaagcgagtctgaatagggcatta 657 Query: 250 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 309 || |||||| |||||||||||||||| || ||||||||||||| |||| |||||| | | Sbjct: 658 atggtcacttcttatggacccgaaccgggatgatctatccatggccagattgaagcgttg 717 Query: 310 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 369 | ||||| | ||| ||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 718 gtaaaacttcgtgaaggatcgaaccgaccgatgttgaaaaatcggcggatgagttgtgga 777 Query: 370 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 429 ||| || ||||| || ||||| || ||||||||||| |||| ||||||| |||||||| Sbjct: 778 tagcggagaaattcctatcgaatcccgagctagctggatctctccgaaatttgttgaggc 837 Query: 430 g 430 | Sbjct: 838 g 838 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 587 agagggaaacagcccggatcaccagctaaggcccctaaatg 627 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 982 agagggaaacagcccagatcaccagctaaggcccctaaatg 1022 Score = 52.0 bits (26), Expect = 0.002 Identities = 57/66 (86%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 452 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 510 |||||||||| || |||||||||||||||||| ||||||||||| ||| | | ||||| Sbjct: 862 ggggtaaagctaccgtttcggtgcgggctgcgaaagcggtaccaagtcgtgacgaactca 921 Query: 511 gaatac 516 |||||| Sbjct: 922 gaatac 927
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Minus Query: 155 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 214 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 39855 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 39800 Query: 215 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 273 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 39799 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 39740 Query: 274 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 333 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 39739 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 39680 Query: 334 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 393 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 39679 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 39620 Query: 394 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 452 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 39619 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 39560 Query: 453 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 512 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 39559 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 39500 Query: 513 atacta 518 |||||| Sbjct: 39499 atacta 39494 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 155 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 214 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 19545 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 19600 Query: 215 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 273 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 19601 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 19660 Query: 274 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 333 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 19661 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 19720 Query: 334 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 393 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 19721 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 19780 Query: 394 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 452 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 19781 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 19840 Query: 453 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 512 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 19841 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 19900 Query: 513 atacta 518 |||||| Sbjct: 19901 atacta 19906 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 39994 ggctaaatattcctgaatgaccgatagcgaacaagtaccgcgagggaaaggtgaaaagaa 39935 Query: 73 cccc 76 |||| Sbjct: 39934 cccc 39931 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 19406 ggctaaatattcctgaatgaccgatagcgaacaagtaccgcgagggaaaggtgaaaagaa 19465 Query: 73 cccc 76 |||| Sbjct: 19466 cccc 19469 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 625 at 626 || Sbjct: 39408 at 39407 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 625 at 626 || Sbjct: 19992 at 19993
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 252 bits (127), Expect = 1e-63 Identities = 272/317 (85%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 215 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 269 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 270 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 329 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 935 Query: 330 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 389 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 936 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 995 Query: 390 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 446 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 996 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1054 Query: 447 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 505 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1055 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1114 Query: 506 actctgaatactagata 522 |||| |||||||||||| Sbjct: 1115 actcagaatactagata 1131 Score = 109 bits (55), Expect = 1e-20 Identities = 160/191 (83%), Gaps = 8/191 (4%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| | | ||||||| ||||||| ||||| ||||| Sbjct: 624 ggctaaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaa 682 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||| ||| ||||||||||||| |||||||| | |||| ||||||||||||| Sbjct: 683 cccctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc- 738 Query: 133 gaaagtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 191 |||| | || ||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 739 --aagttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 796 Query: 192 cttggttaagg 202 | |||||||| Sbjct: 797 caaggttaagg 807 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 587 agagggaaacagcccggatcaccagctaaggcccctaaatg 627 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1180 agagggaaacagcccagatcaccagctaaggcccctaaatg 1220
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 5e-63 Identities = 310/368 (84%), Gaps = 5/368 (1%) Strand = Plus / Plus Query: 150 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 209 |||||||||||||||||||||||||||||| ||||||| |||| ||||||||| | | Sbjct: 188 gcgtgcctgttgaagaatgagccggcgacttataggcactggca-ggttaaggggaataa 246 Query: 210 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 269 |||| | |||| || |||| ||||||| ||||||||| | |||| || |||| |||| Sbjct: 247 accc---gaagccaaagggaaaccgagtctgaatagggcgttagtcagtgtttatagacc 303 Query: 270 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 329 |||||| |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||| Sbjct: 304 cgaacccgggtgatctaaccatgtccaggatgaagcttgggtgacaccaagtggaggtcc 363 Query: 330 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 389 |||||||| |||||| | ||||||||| |||||||||||||||||||||| ||| Sbjct: 364 gaaccgaccaccgttgaaaaggtggcggatgaggtgtggttaggggtgaaatgccaatcg 423 Query: 390 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 449 ||||| ||||||||||||||||| ||||||| |||||||| |||| |||| ||| | Sbjct: 424 aacccggagctagctggttctcctcgaaatgtgttgaggcacagcggttgtgattacagc 483 Query: 450 t-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 508 | |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| Sbjct: 484 tggggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaact 543 Query: 509 ctgaatac 516 | |||||| Sbjct: 544 cagaatac 551 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 612 ctaaggcccctaaatg 627 |||||| ||||||||| Sbjct: 626 ctaaggtccctaaatg 641 Score = 97.6 bits (49), Expect = 4e-17 Identities = 83/93 (89%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 16 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 75 |||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||||| || Sbjct: 58 taaatactcctgcgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaa-cc 116 Query: 76 ccagtgggtagtgaaatagaacgtgaaaccgtg 108 || | ||| ||||||||||||| |||||||||| Sbjct: 117 ccggaggggagtgaaatagaacatgaaaccgtg 149
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 5e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 225 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 284 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 285 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 344 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 345 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 404 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 405 ggttctccccgaaatgcgttgaggcgcagc 434 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 117 bits (59), Expect = 5e-23 Identities = 139/165 (84%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||||| Sbjct: 55 ggctaaatactcctgtgtgaccgatagagaaccagtaccgcgagggaaaggtgaaaagaa 114 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||| | ||| ||||||||||||| ||||||||| |||| |||||||||||||| Sbjct: 115 ccccgggaggggagtgaaatagaacctgaaaccgtt---agcttacaagcagtgggagga 171 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 177 | | |||||||||||||||||||||| |||||||||||| Sbjct: 172 cgattaaacgtctgaccgcgtgcctgttgaagcatgagccggcga 216 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 452 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 511 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 512 aatac 516 ||||| Sbjct: 548 aatac 552 Score = 101 bits (51), Expect = 3e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 613 taaggcccctaaatgaccgctcagtga 639 ||||| ||| |||| ||| || ||||| Sbjct: 628 taaggtccccaaataaccactaagtga 654
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 5e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 225 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 284 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 285 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 344 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 345 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 404 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 405 ggttctccccgaaatgcgttgaggcgcagc 434 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 452 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 511 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 512 aatac 516 ||||| Sbjct: 548 aatac 552 Score = 107 bits (54), Expect = 4e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 612 ctaaggcccctaaatgaccgctcagtgata 641 |||||| ||| ||||||| ||| ||||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgata 656 Score = 101 bits (51), Expect = 3e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||| Sbjct: 55 ggctaaatactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaa 114 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgt 107 |||| | ||| ||||||||||||| ||||||||| Sbjct: 115 ccccgaaaggggagtgaaatagaacctgaaaccgt 149 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| ||||||||||||| |||||||||||| | |||||||||||| Sbjct: 184 tgaccgtgtgcctgttgaagcatgagccggcgagttataggcagtggc 231
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 250 bits (126), Expect = 5e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 215 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 273 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 274 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 333 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 334 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 393 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 394 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 451 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 452 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 510 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 511 gaatactagatatg 524 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 613 taaggcccctaaatg 627 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047 Score = 117 bits (59), Expect = 5e-23 Identities = 86/95 (90%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 451 ggctaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaa 510 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgt 107 |||| |||| ||||||||||||| ||||||||| Sbjct: 511 cccctgttggggagtgaaatagaacatgaaaccgt 545 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 193 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 5e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||||||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 276 ggctaagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaa 335 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 336 ccccgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 185 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 5e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||||||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 276 ggctaagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaa 335 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 336 ccccgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 185 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 5e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||||||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 276 ggctaagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaa 335 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 336 ccccgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 185 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 5e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 323 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 382 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 383 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 442 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 443 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 499 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 500 aggcaaactctgaatactag 519 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 146 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 202 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 431 ggctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaa 490 Query: 73 cccc 76 |||| Sbjct: 491 cccc 494 Score = 81.8 bits (41), Expect = 3e-12 Identities = 69/77 (89%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 611 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 612 ctaaggcccctaaatga 628 ||||||||||| ||||| Sbjct: 1013 ctaaggcccctcaatga 1029 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 252 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 307 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 250 bits (126), Expect = 5e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 215 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 273 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 274 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 333 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 334 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 393 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 394 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 451 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 452 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 510 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 511 gaatactagatatg 524 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 613 taaggcccctaaatg 627 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047 Score = 117 bits (59), Expect = 5e-23 Identities = 86/95 (90%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 451 ggctaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaa 510 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgt 107 |||| |||| ||||||||||||| ||||||||| Sbjct: 511 cccctgttggggagtgaaatagaacatgaaaccgt 545 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 193 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 248 bits (125), Expect = 2e-62 Identities = 197/221 (89%) Strand = Plus / Plus Query: 214 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 273 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 274 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 333 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 334 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 393 |||| ||||||||| |||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 742 cgaccgatgttgaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaact 801 Query: 394 cagagctagctggttctccccgaaatgcgttgaggcgcagc 434 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 802 cggagctagctggttctccccgaaatgcgttgaggcgcagc 842 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 612 ctaaggcccctaaatgaccgctcagtg 638 |||||||||| ||||||||||| |||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtg 1030 Score = 113 bits (57), Expect = 7e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 15 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 74 ||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 430 ctaaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaacc 489 Query: 75 cccagtgggtagtgaaatagaacgtgaaaccgt 107 |||| ||| ||||||||||| | ||||||||| Sbjct: 490 cccataggggagtgaaatagatcatgaaaccgt 522 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 143 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 202 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 447 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 506 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 507 ctctgaatactagata 522 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 246 bits (124), Expect = 8e-62 Identities = 273/317 (86%), Gaps = 8/317 (2%) Strand = Plus / Plus Query: 215 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 271 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 272 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 331 |||| ||||||||||| ||||||||||||||||||||| | | || ||| ||||||||| Sbjct: 704 aacccgggtgatctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccga 763 Query: 332 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 391 |||||| ||||||||| |||| |||||||||||||| |||||| ||||| ||| ||||| Sbjct: 764 accgaccgatgttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaa 823 Query: 392 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-at 448 | | ||||||||||| ||||||||||||||||||||||||||| || || || || || Sbjct: 824 ctcggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactat 882 Query: 449 ctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 507 || |||||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||| Sbjct: 883 cttggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaac 942 Query: 508 tctgaatactagatatg 524 || |||||| ||||||| Sbjct: 943 tcagaatacaagatatg 959 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 17 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 76 ||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 455 aaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaacccc 514 Query: 77 cagtgggtagtgaaatagaacgtgaaaccgt 107 |||| ||||||||||||| ||||||||| Sbjct: 515 tgttggggagtgaaatagaacatgaaaccgt 545 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 573 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 627 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatg 2761 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 202 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 246 bits (124), Expect = 8e-62 Identities = 269/314 (85%), Gaps = 5/314 (1%) Strand = Plus / Plus Query: 215 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 272 |||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 718 ccggagccttagcgaaagcaagtcttaatagggcgataaagtcacttcttatggacccga 777 Query: 273 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 332 ||| ||||||||||| |||| |||||||||||||||| | | || || |||||||||| Sbjct: 778 acccgggtgatctattcatggccaggatgaagcttgggtaacacctagtggaggtccgaa 837 Query: 333 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 392 ||||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 838 ccgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaac 897 Query: 393 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg--actggacatct 450 | ||||||||||| ||||||||||||||||||||||||||| || | | | |||| Sbjct: 898 tcggagctagctggatctccccgaaatgcgttgaggcgcagcggtggctatgagctatct 957 Query: 451 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 509 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 958 agaggtaaagcgactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1017 Query: 510 tgaatactagatat 523 ||||||||||||| Sbjct: 1018 agaatactagatat 1031 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 144 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 202 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 651 ctgaccgcgtgcctgttgaagaatgagcctgcgacttatagggagtggcaaggttaagg 709 Score = 77.8 bits (39), Expect = 4e-11 Identities = 82/95 (86%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||||||||||||||| | | ||||||| ||||||| ||| ||||||| Sbjct: 526 ggctaaatactcctgggtgaccgatagtgca-aagtaccgcgagggaatggtaaaaagaa 584 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgt 107 |||| ||| ||||||||||||| ||||||||| Sbjct: 585 cccctgtaggggagtgaaatagaacatgaaaccgt 619 Score = 75.8 bits (38), Expect = 2e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 587 agagggaaacagcccggatcaccagctaaggcccctaaatga 628 ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1079 agagggaaacagcccagatcaccagctaaggcccctaaatga 1120
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 225 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 284 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 285 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 344 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 345 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 404 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 405 ggttctccccgaaatgcgttgaggcgcagcagttg 439 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 55 ggctaaatactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaa 114 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgt 107 |||| | ||| ||||||||||||| ||||||||| Sbjct: 115 ccccgaaaggggagtgaaatagaacatgaaaccgt 149 Score = 113 bits (57), Expect = 7e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 612 ctaaggcccctaaatgaccgctcagtgat 640 |||||| ||| ||||| ||||||||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgat 657 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 452 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 511 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 512 aatac 516 ||||| Sbjct: 550 aatac 554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 143 tctgaccgcgtgcctgttgaagaatgagccggcga 177 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 244 bits (123), Expect = 3e-61 Identities = 262/305 (85%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 215 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 274 |||||||| || |||| ||||||| || ||||||| ||| || |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaac 308 Query: 275 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 334 | ||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 cctggtgatctaaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 335 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 394 ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacca 428 Query: 395 agagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag 452 ||||||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctgg 486 Query: 453 -gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 511 |||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 512 aatac 516 ||||| Sbjct: 547 aatac 551 Score = 93.7 bits (47), Expect = 7e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||| Sbjct: 55 ggctaaatactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaa 114 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgt 107 |||| ||| ||||||||||||| ||||||||| Sbjct: 115 ccccggaaggggagtgaaatagaacatgaaaccgt 149 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 612 ctaaggcccctaaat 626 |||||| ||| |||| Sbjct: 626 ctaaggtccccaaat 640 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 187 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 244 bits (123), Expect = 3e-61 Identities = 267/310 (86%), Gaps = 5/310 (1%) Strand = Plus / Plus Query: 215 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 274 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 275 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 334 | |||||||||| |||| |||||||||| |||| | | || || | |||||||||||| Sbjct: 878 ccgggtgatctaatcatggccaggatgaaatttgggtaacaccaaccggaggtccgaacc 937 Query: 335 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 394 ||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | Sbjct: 938 gaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactc 997 Query: 395 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt--gactggacatctag 452 ||||||||||| ||||||||||||||||||||||||||| ||| || | ||||||| Sbjct: 998 ggagctagctggatctccccgaaatgcgttgaggcgcagcggttaagatttaccatctag 1057 Query: 453 gggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 511 ||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||| | Sbjct: 1058 gggtaaagcgactgtttcggtgcgggctgcgaaagcggtaccaagtcgtggcaaactcag 1117 Query: 512 aatactagat 521 |||||||||| Sbjct: 1118 aatactagat 1127 Score = 117 bits (59), Expect = 5e-23 Identities = 86/95 (90%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 615 ggctaaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaa 674 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgt 107 || | | | ||||||||||||| ||||||||| Sbjct: 675 cctctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 144 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 587 agagggaaacagcccggatcaccagctaaggcccctaaatg 627 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatg 1217
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 225 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 284 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 285 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 344 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 345 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 404 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 405 ggttctccccgaaatgcgttgaggcg 430 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||| Sbjct: 320029 ggctaagtactactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaa 320088 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 320089 ccccgggaggggagtgaaatagaacatgaaaccgtg 320124 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 320158 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 320205 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 625 atgaccgctcagtgata 641 || | |||| ||||||| Sbjct: 320614 attaacgctaagtgata 320630 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcga 500 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Minus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 1775855 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 1775796 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 1775795 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 1775736 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 1775735 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 1775676 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 1775675 agctagctggttctccccgaaatacgttgaggcg 1775642 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 376214 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 376273 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 376274 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 376333 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 376334 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 376393 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 376394 agctagctggttctccccgaaatacgttgaggcg 376427 Score = 103 bits (52), Expect = 7e-19 Identities = 85/96 (88%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||| ||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1776051 ggctaagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaa 1775992 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 1775991 ccccgggaggggagtgaaatagaacatgaaaccgtg 1775956 Score = 103 bits (52), Expect = 7e-19 Identities = 85/96 (88%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||| ||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 376018 ggctaagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaa 376077 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 376078 ccccgggaggggagtgaaatagaacatgaaaccgtg 376113 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1775922 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 1775875 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 376147 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 376194 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 1775526 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 1775467 Query: 625 at 626 || Sbjct: 1775466 at 1775465 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 376543 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 376602 Query: 625 at 626 || Sbjct: 376603 at 376604 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 225 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 284 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 285 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 344 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 345 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 404 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 405 ggttctccccgaaatgcgttgaggcg 430 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 29 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 88 ||||||||||| ||| ||||||| ||||||||||||||||||||||| | ||| |||| Sbjct: 2468 gtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtg 2527 Query: 89 aaatagaacgtgaaaccgtg 108 ||||||||| |||||||||| Sbjct: 2528 aaatagaacatgaaaccgtg 2547 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2581 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2628 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2977 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3036 Query: 625 atgaccgctcagtgata 641 || | |||| ||||||| Sbjct: 3037 attaacgctaagtgata 3053 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcga 500 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 225 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 284 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 285 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 344 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 345 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 404 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 405 ggttctccccgaaatgcgttgaggcg 430 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||| Sbjct: 2453 ggctaagtactactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaa 2512 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 2513 ccccgggaggggagtgaaatagaacatgaaaccgtg 2548 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2582 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2629 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2978 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3037 Query: 625 atgaccgctcagtgata 641 || | |||| ||||||| Sbjct: 3038 attaacgctaagtgata 3054 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcga 500 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2876 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 2935 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2936 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2995 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2996 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 3055 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 3056 agctagctggttctccccgaaatacgttgaggcg 3089 Score = 103 bits (52), Expect = 7e-19 Identities = 85/96 (88%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||| ||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 2680 ggctaagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaa 2739 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 2740 ccccgggaggggagtgaaatagaacatgaaaccgtg 2775 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2809 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2856 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 3205 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 3264 Query: 625 at 626 || Sbjct: 3265 at 3266 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 3127 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 3177
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 1e-60 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 225 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 284 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 285 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 344 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 345 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 404 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 405 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 461 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 462 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 516 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 553 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 612 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 613 taaggcccctaaatga 628 ||||| ||| |||||| Sbjct: 626 taaggtccccaaatga 641 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||| ||| | ||||||||||| ||| ||||||| ||||||||||||||||||| Sbjct: 55 ggctaaatattcccgtgtgaccgatagagaaacagtaccgcgagggaaaggtgaaaagaa 114 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgt 107 |||| ||| ||||||||||||| ||||||||| Sbjct: 115 ccccggaaggggagtgaaatagaacatgaaaccgt 149 Score = 65.9 bits (33), Expect = 2e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 143 tctgaccgcgtgcctgttgaagaatgagccggcgact 179 |||||||| |||||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcgact 218
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 225 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 284 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 285 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 344 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 345 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 404 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 405 ggttctccccgaaatgcgttgaggcg 430 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||| Sbjct: 20428 ggctaagtactactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaa 20369 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 20368 ccccgggaggggagtgaaatagaacatgaaaccgtg 20333 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 20299 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 20252 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 19844 Query: 625 atgaccgctcagtgata 641 || | |||| ||||||| Sbjct: 19843 attaacgctaagtgata 19827 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcga 500 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 225 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 284 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 285 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 344 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 345 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 404 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 405 ggttctccccgaaatgcgttgaggcg 430 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||| Sbjct: 2182 ggctaagtactactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaa 2123 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 2122 ccccgggaggggagtgaaatagaacatgaaaccgtg 2087 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2053 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2006 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 1598 Query: 625 atgaccgctcagtgata 641 || | |||| ||||||| Sbjct: 1597 attaacgctaagtgata 1581 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcga 500 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 225 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 284 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 285 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 344 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 345 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 404 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 405 ggttctccccgaaatgcgttgaggcg 430 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||| Sbjct: 315518 ggctaagtactactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaa 315577 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 315578 ccccgggaggggagtgaaatagaacatgaaaccgtg 315613 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 315647 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 315694 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 565 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 624 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 316043 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 316102 Query: 625 atgaccgctcagtgata 641 || | |||| ||||||| Sbjct: 316103 attaacgctaagtgata 316119 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 466 tttcggtgcgggctgcgcgagcggtaccaaatcga 500 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 225 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 284 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1659136 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1659195 Query: 285 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 344 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1659196 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1659255 Query: 345 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 404 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1659256 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1659315 Query: 405 ggttctccccgaaatgcgttgaggcg 430 ||||||||||||||| |||||||||| Sbjct: 1659316 ggttctccccgaaatacgttgaggcg 1659341 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 225 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 284 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1049608 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1049549 Query: 285 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 344 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1049548 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1049489 Query: 345 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 404 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1049488 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1049429 Query: 405 ggttctccccgaaatgcgttgaggcg 430 ||||||||||||||| |||||||||| Sbjct: 1049428 ggttctccccgaaatacgttgaggcg 1049403 Score = 103 bits (52), Expect = 7e-19 Identities = 85/96 (88%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||||| Sbjct: 1658932 ggctaaatactcctgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaa 1658991 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| ||| ||||||||||||| |||||||||| Sbjct: 1658992 ccccggaaggggagtgaaatagaacatgaaaccgtg 1659027 Score = 103 bits (52), Expect = 7e-19 Identities = 85/96 (88%) Strand = Plus / Minus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 ||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||||| Sbjct: 1049812 ggctaaatactcctgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaa 1049753 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| ||| ||||||||||||| |||||||||| Sbjct: 1049752 ccccggaaggggagtgaaatagaacatgaaaccgtg 1049717 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 452 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 511 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 512 aatac 516 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 452 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 511 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 512 aatac 516 ||||| Sbjct: 1049320 aatac 1049316 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1659061 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1659108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1049683 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1049636 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 612 ctaagg 617 |||||| Sbjct: 1659503 ctaagg 1659508 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 552 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 611 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 612 ctaagg 617 |||||| Sbjct: 1049241 ctaagg 1049236
>gb|DQ313008.1| Uncultured bacterium clone 3O7D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 217 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 276 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 486 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 545 Query: 277 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 336 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 546 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 605 Query: 337 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 396 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 606 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 665 Query: 397 agctagctggttctccccgaaatgcgttgaggcg 430 ||||||||||||||||||||||| |||||||||| Sbjct: 666 agctagctggttctccccgaaatacgttgaggcg 699 Score = 103 bits (52), Expect = 7e-19 Identities = 85/96 (88%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||| |||| ||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 290 ggctaagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaa 349 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtg 108 |||| | ||| ||||||||||||| |||||||||| Sbjct: 350 ccccgggaggggagtgaaatagaacatgaaaccgtg 385 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 145 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 419 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 466
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 242 bits (122), Expect = 1e-60 Identities = 172/187 (91%), Gaps = 5/187 (2%) Strand = Plus / Plus Query: 13 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 72 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 316 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 375 Query: 73 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 132 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 376 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 432 Query: 133 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 192 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 490 Query: 193 ttggtta 199 ||||||| Sbjct: 491 ttggtta 497 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,819,977 Number of Sequences: 3902068 Number of extensions: 3819977 Number of successful extensions: 102907 Number of sequences better than 10.0: 25297 Number of HSP's better than 10.0 without gapping: 25267 Number of HSP's successfully gapped in prelim test: 70 Number of HSP's that attempted gapping in prelim test: 59624 Number of HSP's gapped (non-prelim): 41806 length of query: 641 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 618 effective length of database: 17,143,297,704 effective search space: 10594557981072 effective search space used: 10594557981072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
