| Clone Name | basd1d18 |
|---|---|
| Clone Library Name | barley_pub |
>CIGR2_ORYSA (Q8GVE1) Chitin-inducible gibberellin-responsive protein 2| Length = 544 Score = 234 bits (598), Expect = 8e-62 Identities = 112/160 (70%), Positives = 142/160 (88%) Frame = +2 Query: 17 DLLISELQKMVSVSGEPIQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSELMSYM 196 D++I EL+K+VSVSGEP++RLGAYM+EGLVAR S+G ++YK+LKCKEP+ +S+L+SYM Sbjct: 194 DMMIPELRKIVSVSGEPLERLGAYMVEGLVARLASSGISIYKALKCKEPK--SSDLLSYM 251 Query: 197 HLLYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARASGPPY 376 H LY+ CP+FKFGYMSANGAIAEAVKGE+ IHIIDF I+QG+QW++++QALAAR GPP Sbjct: 252 HFLYEACPYFKFGYMSANGAIAEAVKGEDRIHIIDFHISQGAQWISLLQALAARPGGPPT 311 Query: 377 LRITGIDDSDSAYARGGGLDIVGRRLCNIAQSCCLPFEFN 496 +RITGIDDS SAYARGGGL++VGRRL +IA C +PFEF+ Sbjct: 312 VRITGIDDSVSAYARGGGLELVGRRLSHIASLCKVPFEFH 351
>CIGR1_ORYSA (Q69VG1) Chitin-inducible gibberellin-responsive protein 1| Length = 571 Score = 208 bits (530), Expect = 6e-54 Identities = 100/161 (62%), Positives = 133/161 (82%) Frame = +2 Query: 23 LISELQKMVSVSGEPIQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSELMSYMHL 202 L+ E + +VS++GEPIQRLGAY+LEGLVAR ++G +Y++LKC+EP+ + EL+SYM + Sbjct: 223 LVQEARGVVSINGEPIQRLGAYLLEGLVARHGNSGTNIYRALKCREPE--SKELLSYMRI 280 Query: 203 LYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARASGPPYLR 382 LY+ICP+FKFGYM+ANGAIAEA++ EN IHIIDFQIAQG+QW+T+IQALAAR GPP +R Sbjct: 281 LYNICPYFKFGYMAANGAIAEALRTENNIHIIDFQIAQGTQWITLIQALAARPGGPPRVR 340 Query: 383 ITGIDDSDSAYARGGGLDIVGRRLCNIAQSCCLPFEFNAVN 505 ITGIDD S YARG GLDIVG+ L ++++ +P EF ++ Sbjct: 341 ITGIDDPVSEYARGEGLDIVGKMLKSMSEEFKIPLEFTPLS 381
>GAI_LYCES (Q7Y1B6) DELLA protein GAI (Gibberellic acid-insensitive mutant| protein) Length = 588 Score = 87.0 bits (214), Expect = 3e-17 Identities = 59/165 (35%), Positives = 83/165 (50%), Gaps = 9/165 (5%) Frame = +2 Query: 47 VSVSGEPIQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSELMSYMHLL----YDI 214 VS SG ++++ Y E L R Y P +S SY +L Y+ Sbjct: 230 VSQSGA-MRKVATYFAEALARRIYKI-------------YPQDSMESSYTDVLQMHFYET 275 Query: 215 CPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARASGPPYLRITGI 394 CP+ KF + +AN AI EA G N +H+IDF + QG QW ++QALA R GPP R+TGI Sbjct: 276 CPYLKFAHFTANQAILEAFTGCNKVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGI 335 Query: 395 -----DDSDSAYARGGGLDIVGRRLCNIAQSCCLPFEFNAVNAAS 514 D++D+ L VG +L +A++ + FEF A S Sbjct: 336 GPPQPDNTDA-------LQQVGWKLAQLAETIGVEFEFRGFVANS 373
>DWRF8_MAIZE (Q9ST48) DELLA protein DWARF8 (Protein dwarf-8)| Length = 630 Score = 87.0 bits (214), Expect = 3e-17 Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 10/176 (5%) Frame = +2 Query: 17 DLLISELQKMVSVSGEPIQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSEL-MSY 193 + L+ ++ + S G ++++ AY E L R Y P P +S L ++ Sbjct: 263 EALVKQIPMLASSQGGAMRKVAAYFGEALARRVYRF-----------RPPPDSSLLDAAF 311 Query: 194 MHLL----YDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARA 361 LL Y+ CP+ KF + +AN AI EA G +H++DF I QG QW ++QALA R Sbjct: 312 ADLLHAHFYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRP 371 Query: 362 SGPPYLRITGI-----DDSDSAYARGGGLDIVGRRLCNIAQSCCLPFEFNAVNAAS 514 GPP R+TG+ D++D+ L VG +L A + + F++ + AA+ Sbjct: 372 GGPPSFRLTGVGPPQPDETDA-------LQQVGWKLAQFAHTIRVDFQYRGLVAAT 420
>GAI1_VITVI (Q8S4W7) DELLA protein GAI1 (Gibberellic acid-insensitive mutant| protein 1) (VvGAI1) Length = 590 Score = 87.0 bits (214), Expect = 3e-17 Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 6/172 (3%) Frame = +2 Query: 17 DLLISELQKMVSVSGEPIQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSELMSYM 196 + L+ ++ + ++++ Y EGL R Y LY +P +S + Sbjct: 234 EALVKQIGFLAVSQAGAMRKVATYFAEGLARRIYR----LYPD------KPLDSSFSDIL 283 Query: 197 HL-LYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARASGPP 373 + Y+ CP+ KF + +AN AI EA +G+ +H+IDF + QG QW ++QALA R GPP Sbjct: 284 QMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMKQGMQWPALMQALALRPGGPP 343 Query: 374 YLRITGI-----DDSDSAYARGGGLDIVGRRLCNIAQSCCLPFEFNAVNAAS 514 R+TGI D++D L VG +L +A++ + FE+ A S Sbjct: 344 SFRLTGIGPPSTDNTDH-------LHEVGWKLAQLAETIHVEFEYRGFVANS 388
>RHT1_WHEAT (Q9ST59) DELLA protein RHT-1 (Reduced height protein 1) (Protein| Rht-B1/Rht-D1) Length = 623 Score = 86.3 bits (212), Expect = 5e-17 Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 10/176 (5%) Frame = +2 Query: 17 DLLISELQKMVSVSGEPIQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSEL-MSY 193 + L+ ++ + + G ++++ AY E L R + PQP +S L ++ Sbjct: 254 EALVKQIPLLAASQGGAMRKVAAYFGEALARRVFRF-----------RPQPDSSLLDAAF 302 Query: 194 MHLL----YDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARA 361 LL Y+ CP+ KF + +AN AI EA G +H++DF I QG QW ++QALA R Sbjct: 303 ADLLHAHFYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRP 362 Query: 362 SGPPYLRITGI-----DDSDSAYARGGGLDIVGRRLCNIAQSCCLPFEFNAVNAAS 514 GPP R+TG+ D++D+ L VG +L A + + F++ + AA+ Sbjct: 363 GGPPSFRLTGVGPPQPDETDA-------LQQVGWKLAQFAHTIRVDFQYRGLVAAT 411
>SLN1_HORVU (Q8W127) DELLA protein SLN1 (Slender protein 1)| Length = 618 Score = 86.3 bits (212), Expect = 5e-17 Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 10/176 (5%) Frame = +2 Query: 17 DLLISELQKMVSVSGEPIQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSEL-MSY 193 + L+ ++ + + G ++++ AY E L R + PQP +S L ++ Sbjct: 250 EALVKQIPLLAASQGGAMRKVAAYFGEALARRVFRF-----------RPQPDSSLLDAAF 298 Query: 194 MHLL----YDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARA 361 LL Y+ CP+ KF + +AN AI EA G +H++DF I QG QW ++QALA R Sbjct: 299 ADLLHAHFYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRP 358 Query: 362 SGPPYLRITGI-----DDSDSAYARGGGLDIVGRRLCNIAQSCCLPFEFNAVNAAS 514 GPP R+TG+ D++D+ L VG +L A + + F++ + AA+ Sbjct: 359 GGPPSFRLTGVGPPQPDETDA-------LQQVGWKLAQFAHTIRVDFQYRGLVAAT 407
>NSP2_MEDTR (Q5NE24) Nodulation signaling pathway 2 protein| Length = 508 Score = 86.3 bits (212), Expect = 5e-17 Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 11/170 (6%) Frame = +2 Query: 20 LLISELQKMVS--VSGEPIQRLGAYMLEGLVARRYSTGHALYKS---------LKCKEPQ 166 +++ L+++VS +G ++RL A+ E L G A L P Sbjct: 140 VILIRLKELVSQHANGSNMERLAAHFTEALHGLLEGAGGAHNNHHHHNNNKHYLTTNGPH 199 Query: 167 PTNSELMSYMHLLYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQA 346 ++ ++ LL D+ P+ KFG+ +AN AI EAV E +H+ID+ I +G QW ++IQ+ Sbjct: 200 DNQNDTLAAFQLLQDMSPYVKFGHFTANQAIIEAVAHERRVHVIDYDIMEGVQWASLIQS 259 Query: 347 LAARASGPPYLRITGIDDSDSAYARGGGLDIVGRRLCNIAQSCCLPFEFN 496 LA+ +G P+LRIT + + + + GRRL + A S PF F+ Sbjct: 260 LASNNNG-PHLRITALSRTGTGRRSIATVQETGRRLTSFAASLGQPFSFH 308
>GAIP_CUCMA (Q6EI06) DELLA protein GAIP (Gibberellic acid-insensitive phloem| protein) (GAIP) (CmGAIP) Length = 579 Score = 85.9 bits (211), Expect = 6e-17 Identities = 58/172 (33%), Positives = 84/172 (48%), Gaps = 6/172 (3%) Frame = +2 Query: 17 DLLISELQKMVSVSGEPIQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSEL-MSY 193 + L+ + + ++++ + E L R Y C E S L M Sbjct: 231 EALVKRIDYLAVSQAGAMRKVATFFAEALARRIYRL---------CPENPLDRSVLDMLQ 281 Query: 194 MHLLYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARASGPP 373 MH Y+ CP+ KF + +AN AI EA +G+ +H+IDF + QG QW +IQALA R SGPP Sbjct: 282 MHF-YESCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGIQWPALIQALALRPSGPP 340 Query: 374 YLRITGI-----DDSDSAYARGGGLDIVGRRLCNIAQSCCLPFEFNAVNAAS 514 R+TGI D+SD L VG +L A++ + FE+ A S Sbjct: 341 TFRLTGIGPPAPDNSDY-------LQDVGWKLVKFAETLHVEFEYRGFVANS 385
>RGL3_ARATH (Q9LF53) DELLA protein RGL3 (RGA-like protein 3)| Length = 523 Score = 85.5 bits (210), Expect = 8e-17 Identities = 49/162 (30%), Positives = 81/162 (50%) Frame = +2 Query: 17 DLLISELQKMVSVSGEPIQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSELMSYM 196 D L+ + + + + ++ Y E L R Y ++ S +P M++ Sbjct: 177 DALVKRVGLLAASQAGAMGKVATYFAEALARRIYR----IHPSAAAIDPSFEEILQMNF- 231 Query: 197 HLLYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARASGPPY 376 YD CP+ KF + +AN AI EAV +H+ID + QG QW ++QALA R GPP Sbjct: 232 ---YDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPALMQALALRPGGPPS 288 Query: 377 LRITGIDDSDSAYARGGGLDIVGRRLCNIAQSCCLPFEFNAV 502 R+TG+ + + G+ +G +L +AQ+ + F+FN + Sbjct: 289 FRLTGVGNPSNR----EGIQELGWKLAQLAQAIGVEFKFNGL 326
>SLR1_ORYSA (Q7G7J6) DELLA protein SLR1 (Protein SLENDER RICE1) (Gibberellic| acid-insensitive mutant protein) (OsGAI) Length = 625 Score = 85.5 bits (210), Expect = 8e-17 Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 11/177 (6%) Frame = +2 Query: 17 DLLISELQKMVSVSGEPIQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSELM--S 190 + L+ ++ + + G ++++ AY E L R Y +P +S L+ + Sbjct: 261 EALVKQIPTLAASQGGAMRKVAAYFGEALARRVYRF-------------RPADSTLLDAA 307 Query: 191 YMHLL----YDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAAR 358 + LL Y+ CP+ KF + +AN AI EA G + +H++DF I QG QW ++QALA R Sbjct: 308 FADLLHAHFYESCPYLKFAHFTANQAILEAFAGCHRVHVVDFGIKQGMQWPALLQALALR 367 Query: 359 ASGPPYLRITGI-----DDSDSAYARGGGLDIVGRRLCNIAQSCCLPFEFNAVNAAS 514 GPP R+TG+ D++D+ L VG +L A + + F++ + AA+ Sbjct: 368 PGGPPSFRLTGVGPPQPDETDA-------LQQVGWKLAQFAHTIRVDFQYRGLVAAT 417
>RGL2_ARATH (Q8GXW1) DELLA protein RGL2 (RGA-like protein 2) (Scarecrow-like| protein 19) Length = 547 Score = 85.1 bits (209), Expect = 1e-16 Identities = 53/166 (31%), Positives = 81/166 (48%) Frame = +2 Query: 17 DLLISELQKMVSVSGEPIQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSELMSYM 196 D L+ + + + ++ Y + L R Y A ++ C P+ E++ M Sbjct: 200 DALVKRVGTLAGSQAGAMGKVATYFAQALARRIYRDYTA--ETDVCAAVNPSFEEVLE-M 256 Query: 197 HLLYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARASGPPY 376 H Y+ CP+ KF + +AN AI EAV +H+ID + QG QW ++QALA R GPP Sbjct: 257 HF-YESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPPS 315 Query: 377 LRITGIDDSDSAYARGGGLDIVGRRLCNIAQSCCLPFEFNAVNAAS 514 R+TGI + L +G +L AQ+ + FEF + A S Sbjct: 316 FRLTGIGPPQT--ENSDSLQQLGWKLAQFAQNMGVEFEFKGLAAES 359
>RGA2_BRACM (Q5BN22) DELLA protein RGA2 (RGA-like protein 2) (BrRGA2)| Length = 579 Score = 84.3 bits (207), Expect = 2e-16 Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 3/169 (1%) Frame = +2 Query: 17 DLLISELQKMVSVSGEPIQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSELMS-- 190 + L+ ++ + ++++ Y E L R Y + PQ +S Sbjct: 234 EALVKQIGFLAVSQAGAMRKVATYFAEALARRIY----------RLSPPQTQIDHSLSDT 283 Query: 191 -YMHLLYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARASG 367 MH Y+ CP+ KF + +AN AI EA +G+ +H+IDF + QG QW ++QALA R G Sbjct: 284 LQMHF-YETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGG 342 Query: 368 PPYLRITGIDDSDSAYARGGGLDIVGRRLCNIAQSCCLPFEFNAVNAAS 514 PP R+TGI A L VG +L +A++ + FE+ A S Sbjct: 343 PPVFRLTGI--GPPAADNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANS 389
>RGA_ARATH (Q9SLH3) DELLA protein RGA (Repressor on the ga1-3 mutant)| (GAI-related sequence) (Restoration of growth on ammonia protein 1) Length = 587 Score = 84.0 bits (206), Expect = 2e-16 Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 8/174 (4%) Frame = +2 Query: 17 DLLISELQKMVSVSGEPIQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSELMS-- 190 + L+ ++ + ++++ Y E L R Y + PQ +S Sbjct: 241 EALVKQIGCLAVSQAGAMRKVATYFAEALARRIY----------RLSPPQNQIDHCLSDT 290 Query: 191 -YMHLLYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARASG 367 MH Y+ CP+ KF + +AN AI EA +G+ +H+IDF + QG QW ++QALA R G Sbjct: 291 LQMHF-YETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGG 349 Query: 368 PPYLRITGI-----DDSDSAYARGGGLDIVGRRLCNIAQSCCLPFEFNAVNAAS 514 PP R+TGI D+SD L VG +L +A++ + FE+ A S Sbjct: 350 PPTFRLTGIGPPAPDNSDH-------LHEVGCKLAQLAEAIHVEFEYRGFVANS 396
>RGA1_BRACM (Q5BN23) DELLA protein RGA1 (RGA-like protein 1) (BrRGA1)| Length = 573 Score = 84.0 bits (206), Expect = 2e-16 Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 3/169 (1%) Frame = +2 Query: 17 DLLISELQKMVSVSGEPIQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSELMS-- 190 + L+ ++ + ++++ Y E L R Y + PQ +S Sbjct: 228 EALVKQIGFLAVSQAGAMRKVATYFAEALARRIY----------RLSPPQTQIDHSLSDT 277 Query: 191 -YMHLLYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARASG 367 MH Y+ CP+ KF + +AN AI EA +G+ +H+IDF + QG QW ++QALA R G Sbjct: 278 LQMHF-YETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGG 336 Query: 368 PPYLRITGIDDSDSAYARGGGLDIVGRRLCNIAQSCCLPFEFNAVNAAS 514 PP R+TGI A L VG +L +A++ + FE+ A S Sbjct: 337 PPSFRLTGI--GPPAADNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANS 383
>GAI_ARATH (Q9LQT8) DELLA protein GAI (Gibberellic acid-insensitive mutant| protein) (Restoration of growth on ammonia protein 2) Length = 533 Score = 82.8 bits (203), Expect = 5e-16 Identities = 48/142 (33%), Positives = 76/142 (53%) Frame = +2 Query: 68 IQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSELMSYMHLLYDICPFFKFGYMSA 247 ++++ Y E L R +Y+ + P + MH Y+ CP+ KF + +A Sbjct: 206 MRKVATYFAEALARR-------IYRLSPSQSPIDHSLSDTLQMHF-YETCPYLKFAHFTA 257 Query: 248 NGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARASGPPYLRITGIDDSDSAYARGG 427 N AI EA +G+ +H+IDF ++QG QW ++QALA R GPP R+TGI A Sbjct: 258 NQAILEAFQGKKRVHVIDFSMSQGLQWPALMQALALRPGGPPVFRLTGI--GPPAPDNFD 315 Query: 428 GLDIVGRRLCNIAQSCCLPFEF 493 L VG +L ++A++ + FE+ Sbjct: 316 YLHEVGCKLAHLAEAIHVEFEY 337
>GAI_GOSHI (Q84TQ7) DELLA protein GAI (Gibberellic acid-insensitive mutant| protein) (GhGAI) Length = 537 Score = 82.0 bits (201), Expect = 9e-16 Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Frame = +2 Query: 17 DLLISELQKMVSVSGEPIQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSELMSYM 196 D L+ + + S ++++ Y E L R +Y+ P+ ++ + Sbjct: 191 DALVKHIGLLASSQTGAMRKVATYFAEALARR-------IYRIFPPDSLDPSYNDKLQIP 243 Query: 197 HLLYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARASGPPY 376 Y+ CP+ KF + +AN AI EA + +H+IDF + QG QW ++QALA R GPP Sbjct: 244 --FYETCPYLKFAHFTANQAILEAFSMASRVHVIDFGLKQGMQWPALMQALALRPGGPPA 301 Query: 377 LRITGI-----DDSDSAYARGGGLDIVGRRLCNIAQSCCLPFEFNAVNAAS 514 R+TGI D++D+ L VG +L +A+ + FEF A S Sbjct: 302 FRLTGIGPPQPDNTDA-------LQQVGWKLAQLAERIGIEFEFRGFVANS 345
>GAIPB_CUCMA (Q6EI05) DELLA protein GAIP-B (Gibberellic acid-insensitive phloem| protein B) (GAIP-B) (CmGAIP-B) Length = 587 Score = 79.7 bits (195), Expect = 4e-15 Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 6/155 (3%) Frame = +2 Query: 68 IQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSELMSYMHL-LYDICPFFKFGYMS 244 ++++ + E L R Y C E P + + + L Y+ P+ KF + + Sbjct: 255 MRKVATFFAEALARRIYRV---------CPE-NPLDHSMSDMLQLHFYESSPYLKFAHFT 304 Query: 245 ANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARASGPPYLRITGI-----DDSDS 409 AN AI EA +G+ +H+IDF + QG QW ++QALA R SGPP R+TGI D+SD Sbjct: 305 ANQAILEAFEGKKRVHVIDFSMNQGMQWPALLQALALRPSGPPAFRLTGIGPPAPDNSDY 364 Query: 410 AYARGGGLDIVGRRLCNIAQSCCLPFEFNAVNAAS 514 L VG +L + ++ + FE+ A S Sbjct: 365 -------LQDVGWKLAKLVETINVEFEYRGFVANS 392
>RGL1_ARATH (Q9C8Y3) DELLA protein RGL1 (RGA-like protein 1) (RGA-like protein)| Length = 511 Score = 73.9 bits (180), Expect = 2e-13 Identities = 47/162 (29%), Positives = 77/162 (47%) Frame = +2 Query: 17 DLLISELQKMVSVSGEPIQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSELMSYM 196 D L+ + + S ++++ Y EGL R Y + ++ +S + Sbjct: 172 DALVKHVGLLASSQAGAMRKVATYFAEGLARRIYR--------IYPRDDVALSSFSDTLQ 223 Query: 197 HLLYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARASGPPY 376 Y+ CP+ KF + +AN AI E +H+ID + G QW +IQALA R +GPP Sbjct: 224 IHFYESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQWPALIQALALRPNGPPD 283 Query: 377 LRITGIDDSDSAYARGGGLDIVGRRLCNIAQSCCLPFEFNAV 502 R+TGI S + + VG +L +A + + FEF ++ Sbjct: 284 FRLTGIGYSLT------DIQEVGWKLGQLASTIGVNFEFKSI 319
>MOC_ORYSA (Q84MM9) Protein MONOCULM 1| Length = 441 Score = 68.9 bits (167), Expect = 8e-12 Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 3/97 (3%) Frame = +2 Query: 212 ICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARAS---GPPYLR 382 I PF +F +++AN AI EAV G +HI+D G QW ++QA+A RA GPP +R Sbjct: 133 IAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGVQWPPLLQAIAERADPALGPPEVR 192 Query: 383 ITGIDDSDSAYARGGGLDIVGRRLCNIAQSCCLPFEF 493 +TG R G RL A+S LPF F Sbjct: 193 VTGAGADRDTLLR------TGNRLRAFARSIHLPFHF 223
>NSP1_MEDTR (Q4VYC8) Nodulation signaling pathway 1 protein| Length = 554 Score = 55.1 bits (131), Expect = 1e-07 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%) Frame = +2 Query: 23 LISELQKMVSVSGEPIQRLGAYMLEGLVARRYSTGHALYK---SLKCKEPQPTNSELMSY 193 L+ L ++ S +G+ RL A+ L L S+ + + EP+ L+ + Sbjct: 190 LLYVLHELASTTGDANHRLAAHGLRALTHHLSSSSSSTPSGTITFASTEPRFFQKSLLKF 249 Query: 194 MHLLYDICPFFKFGYMSANGAIAEAVKGE----NFIHIIDFQIAQGSQWVTMIQALAARA 361 Y+ P+F F AN +I + + E +HI+D ++ G QW T ++AL+ R Sbjct: 250 ----YEFSPWFSFPNNIANASILQVLAEEPNNLRTLHILDIGVSHGVQWPTFLEALSRRP 305 Query: 362 SGPPYL-RITGIDDSDS 409 GPP L R+T ++ S S Sbjct: 306 GGPPPLVRLTVVNASSS 322
>BACC_BACAM (Q8KWS9) Bacilysin biosynthesis oxidoreductase bacC (EC 1.-.-.-)| Length = 254 Score = 31.2 bits (69), Expect = 1.8 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = -2 Query: 325 LAPLSNLEINDVNKVLTLNSLGYSTIGRHVTKF 227 +AP+ +E++D NKVL +N G + +H K+ Sbjct: 93 VAPIHEMELSDWNKVLNVNLTGMFLMSKHALKY 125
>UQCR2_YARLI (Q6C2E3) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) Length = 417 Score = 30.0 bits (66), Expect = 3.9 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 7/63 (11%) Frame = +2 Query: 29 SELQKMVSVS------GEPIQRLGAYMLEGLVAR-RYSTGHALYKSLKCKEPQPTNSELM 187 ++LQ++V + G + + G L G AR R STG+AL +L EP+P L Sbjct: 201 ADLQQLVGTAFADLQEGSKVTQAGTTTLHGGEARVRTSTGNALTIALPIAEPKPVYHALA 260 Query: 188 SYM 196 S++ Sbjct: 261 SFL 263
>BACC_BACSU (P39640) Bacilysin biosynthesis oxidoreductase bacC (EC 1.-.-.-)| Length = 253 Score = 29.6 bits (65), Expect = 5.1 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = -2 Query: 325 LAPLSNLEINDVNKVLTLNSLGYSTIGRHVTK 230 +AP+ +E++D NKVL +N G + +H K Sbjct: 93 VAPIHEMELSDWNKVLQVNLTGMFLMSKHALK 124
>BACC2_BACSU (Q8KWT4) Bacilysin biosynthesis oxidoreductase bacC (EC 1.-.-.-)| Length = 253 Score = 29.3 bits (64), Expect = 6.7 Identities = 11/33 (33%), Positives = 21/33 (63%) Frame = -2 Query: 325 LAPLSNLEINDVNKVLTLNSLGYSTIGRHVTKF 227 +AP+ +E+++ NKVL +N G + +H K+ Sbjct: 93 VAPIHEMELSNWNKVLNVNLTGMFLMSKHALKY 125
>RL22_AERPE (Q9YF76) 50S ribosomal protein L22P| Length = 156 Score = 29.3 bits (64), Expect = 6.7 Identities = 22/82 (26%), Positives = 31/82 (37%) Frame = -2 Query: 331 YPLAPLSNLEINDVNKVLTLNSLGYSTIGRHVTKFEEWTDIIEKMHVGHEL*ICRLRFLT 152 Y L L N+E N NK L + L + H + +T Sbjct: 93 YMLKLLDNVEANAANKNLDVERLKIIHVAAH-------------------------KGIT 127 Query: 151 LQRFIQRMSSRITPRNKAFQHI 86 L+R++ R R TPRN+ HI Sbjct: 128 LKRWMPRAWGRATPRNRVHSHI 149
>SOX2_CHICK (P48430) Transcription factor SOX-2| Length = 315 Score = 28.9 bits (63), Expect = 8.7 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = -1 Query: 110 SQQGLPTYTLPDVGLVLQTRKPSSVTLISASPHT 9 SQQG P L +G V++T SS ++++S H+ Sbjct: 226 SQQGTPGMALGSMGSVVKTESSSSPPVVTSSSHS 259
>2AAB_ARATH (Q38950) Serine/threonine-protein phosphatase 2A 65 kDa regulatory| subunit A beta isoform (PP2A, subunit A, beta isoform) (AtA beta) Length = 587 Score = 28.9 bits (63), Expect = 8.7 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Frame = +2 Query: 113 RYSTGHALYKSLKCKEPQPTNSELM-SYMHLLYDICPFFKFGYMSANGAIAEAVKGENFI 289 RY + LY+ + P+PT +EL+ +Y+ LL D A IA A K F Sbjct: 258 RYMVANQLYELCEAVGPEPTRTELVPAYVRLLRD---------NEAEVRIAAAGKVTKFC 308 Query: 290 HIIDFQIA 313 I++ +IA Sbjct: 309 RILNPEIA 316 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,426,922 Number of Sequences: 219361 Number of extensions: 1556285 Number of successful extensions: 4214 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 4106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4205 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)