Clone Name	basd1d18
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AC150751.1| Oryza sativa (japonica cultivar-group) chromosome...	402	e-109
2	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	402	e-109
3	gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare str...	402	e-109
4	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	402	e-109
5	dbj|AK073386.1| Oryza sativa (japonica cultivar-group) cDNA clon...	402	e-109
6	gb|AY109543.1| Zea mays CL854_1 mRNA sequence	287	2e-74
7	ref|NM_196102.1| Oryza sativa (japonica cultivar-group) putative...	212	8e-52
8	gb|AC113335.1| Genomic sequence for Oryza sativa (japonica culti...	212	8e-52
9	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	212	8e-52
10	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	212	8e-52
11	gb|BT014572.1| Lycopersicon esculentum clone 134027R, mRNA sequence	64	5e-07
12	emb|BX831005.1|CNS0A0O3 Arabidopsis thaliana Full-length cDNA Co...	64	5e-07
13	ref|NM_203174.1| Arabidopsis thaliana PAT1 (PHYTOCHROME A SIGNAL...	56	1e-04
14	ref|NM_124189.3| Arabidopsis thaliana PAT1 (PHYTOCHROME A SIGNAL...	56	1e-04
15	gb|BT025326.1| Arabidopsis thaliana At5g48150 mRNA, complete cds	56	1e-04
16	emb|BX831686.1|CNS0A10E Arabidopsis thaliana Full-length cDNA Co...	56	1e-04
17	gb|AF153443.1|AF153443 Arabidopsis thaliana phytochrome A signal...	56	1e-04
18	dbj|AK117483.1| Arabidopsis thaliana At5g48150 mRNA for putative...	56	1e-04
19	dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	56	1e-04
20	ref|NM_126521.2| Arabidopsis thaliana SCL21 (SCARECROW-LIKE 21);...	52	0.002
21	emb|CR955006.2| Medicago truncatula chromosome 5 clone mth2-5i4,...	52	0.002
22	gb|AC007211.6| Arabidopsis thaliana chromosome 2 BAC F1O13 genom...	52	0.002
23	gb|AC006955.6| Arabidopsis thaliana chromosome 2 clone F28I8 map...	52	0.002
24	dbj|AK221099.1| Arabidopsis thaliana mRNA for putative SCARECROW...	52	0.002
25	emb|BX818810.1|CNS0A9T0 Arabidopsis thaliana Full-length cDNA Co...	52	0.002
26	gb|AF210732.1|AF210732 Arabidopsis thaliana scarecrow-like 21 (S...	52	0.002
27	emb|AJ538575.1|NTA538575 Nicotiana tabacum cDNA-AFLP-fragment BC...	52	0.002
28	dbj|AK175990.1| Arabidopsis thaliana mRNA for putative SCARECROW...	52	0.002
29	dbj|AK175210.1| Arabidopsis thaliana mRNA for putative SCARECROW...	52	0.002
30	emb|BX821639.1|CNS0A92G Arabidopsis thaliana Full-length cDNA Co...	48	0.029
31	ref|XM_478905.1| Oryza sativa (japonica cultivar-group), mRNA	46	0.11
32	ref|XM_506430.1| PREDICTED Oryza sativa (japonica cultivar-group...	46	0.11
33	dbj|AK061928.1| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.11
34	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.11
35	gb|AY062210.1| Oryza sativa chitin-inducible gibberellin-respons...	46	0.11
36	emb|AJ538615.1|NTA538615 Nicotiana tabacum cDNA-AFLP-fragment BC...	46	0.11
37	dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic D...	46	0.11
38	dbj|AK122131.1| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.11
39	dbj|AK098890.1| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.11
40	dbj|AK073470.1| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.11
41	emb|Z99112.2|BSUB0009 Bacillus subtilis complete genome (section...	42	1.8
42	gb|AC148526.24| Medicago truncatula clone mth2-53k6, complete se...	40	7.0
43	gb|AY312169.1| Zea mays homeobox transcription factor KNOTTED1 (...	40	7.0
44	gb|AY727731.1| Anopheles funestus isolate 442 NADH dehydrogenase...	40	7.0
45	gb|AY727676.1| Anopheles funestus isolate 220 NADH dehydrogenase...	40	7.0
46	gb|AY260164.1| Zea mays KNOTTED1 (kn1) gene, complete cds	40	7.0
47	gb|AY062209.1| Oryza sativa chitin-inducible gibberellin-respons...	40	7.0
48	dbj|AP004235.4| Oryza sativa (japonica cultivar-group) genomic D...	40	7.0
49	dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic D...	40	7.0
50	dbj|AK069266.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	7.0
51	emb|BX842613.7| Zebrafish DNA sequence from clone CH211-227J9 in...	40	7.0
52	emb|AL772203.14| Mouse DNA sequence from clone RP23-398I1 on chr...	40	7.0
53	gb|DQ102955.1| Anopheles funestus KE52 from Kenya NADH dehydroge...	40	7.0
54	gb|DQ102952.1| Anopheles funestus KE31 from Kenya NADH dehydroge...	40	7.0

---

>gb|AC150751.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNOa0279P04, complete sequence
          Length = 32479

 Score =  402 bits (203), Expect = e-109
 Identities = 415/486 (85%), Gaps = 6/486 (1%)
 Strand = Plus / Plus

                                                                         
Query: 16    ggacttgctgatatcagagttacagaagatggtttccgtgtctggagaaccaatccaacg 75
             ||||||||||||||| ||||||  ||| ||||||||| | |||||||| || || |||||
Sbjct: 16702 ggacttgctgatatctgagttaaggaacatggtttccatttctggagagccgatgcaacg 16761

                                                                         
Query: 76    tctgggagcgtatatgttggaaggccttgttgcgaggcgttattctactggacatgcgtt 135
              || ||||| ||||||||||||||||||||||| |||| || ||| ||||| ||||| ||
Sbjct: 16762 ccttggagcctatatgttggaaggccttgttgccaggctttcttcgactgggcatgcctt 16821

                                                                         
Query: 136   gtataaatctctgaagtgtaaggaacctcaacctacaaattcagagctcatgtcctacat 195
              |||||||| ||||||||||| |||      ||||| |  |  ||||||||||| || ||
Sbjct: 16822 atataaatccctgaagtgtaaagaa------cctactagcttcgagctcatgtcttatat 16875

                                                                         
Query: 196   gcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaatggtgc 255
             |||||| |||||||| || || || || ||||| ||||||||||||||||||||||| ||
Sbjct: 16876 gcatctcctctatgagatatgcccgtttttcaagtttggttacatgtctgccaatggagc 16935

                                                                         
Query: 256   tatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaattgctca 315
              || || |||||||||||||| ||||||||| |||||||||| || ||||||||||||||
Sbjct: 16936 aattgcagaggctgttaagggcgagaactttgttcacatcatcgacttccaaattgctca 16995

                                                                         
Query: 316   agggagccagtgggtaactatgatacaggcccttgctgcgagggctagcggaccaccata 375
             ||| |||||||||| |||||||||||||||||||||||| ||| || | |||||||||||
Sbjct: 16996 aggtagccagtgggcaactatgatacaggcccttgctgcaaggcctgggggaccaccata 17055

                                                                         
Query: 376   tctaagaattactggtatagatgattcagattcggcttatgcccgaggtggtggactgga 435
              || || ||||||||||||||||| ||  |||| ||  ||||||||||||||||||||||
Sbjct: 17056 cctgaggattactggtatagatgactcgaattctgcccatgcccgaggtggtggactgga 17115

                                                                         
Query: 436   tatagttgggcgtaggttatgcaacattgcccagtcatgttgtctgccctttgagttcaa 495
             |||||| || ||  |||||| ||| ||||||||||||||| |||||||||||||||||||
Sbjct: 17116 tatagtcggacggcggttattcaatattgcccagtcatgtggtctgccctttgagttcaa 17175

                   
Query: 496   tgctgt 501
             ||||||
Sbjct: 17176 tgctgt 17181

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  402 bits (203), Expect = e-109
 Identities = 415/486 (85%), Gaps = 6/486 (1%)
 Strand = Plus / Plus

                                                                           
Query: 16      ggacttgctgatatcagagttacagaagatggtttccgtgtctggagaaccaatccaacg 75
               ||||||||||||||| ||||||  ||| ||||||||| | |||||||| || || |||||
Sbjct: 4833066 ggacttgctgatatctgagttaaggaacatggtttccatttctggagagccgatgcaacg 4833125

                                                                           
Query: 76      tctgggagcgtatatgttggaaggccttgttgcgaggcgttattctactggacatgcgtt 135
                || ||||| ||||||||||||||||||||||| |||| || ||| ||||| ||||| ||
Sbjct: 4833126 ccttggagcctatatgttggaaggccttgttgccaggctttcttcgactgggcatgcctt 4833185

                                                                           
Query: 136     gtataaatctctgaagtgtaaggaacctcaacctacaaattcagagctcatgtcctacat 195
                |||||||| ||||||||||| |||      ||||| |  |  ||||||||||| || ||
Sbjct: 4833186 atataaatccctgaagtgtaaagaa------cctactagcttcgagctcatgtcttatat 4833239

                                                                           
Query: 196     gcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaatggtgc 255
               |||||| |||||||| || || || || ||||| ||||||||||||||||||||||| ||
Sbjct: 4833240 gcatctcctctatgagatatgcccgtttttcaagtttggttacatgtctgccaatggagc 4833299

                                                                           
Query: 256     tatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaattgctca 315
                || || |||||||||||||| ||||||||| |||||||||| || ||||||||||||||
Sbjct: 4833300 aattgcagaggctgttaagggcgagaactttgttcacatcatcgacttccaaattgctca 4833359

                                                                           
Query: 316     agggagccagtgggtaactatgatacaggcccttgctgcgagggctagcggaccaccata 375
               ||| |||||||||| |||||||||||||||||||||||| ||| || | |||||||||||
Sbjct: 4833360 aggtagccagtgggcaactatgatacaggcccttgctgcaaggcctgggggaccaccata 4833419

                                                                           
Query: 376     tctaagaattactggtatagatgattcagattcggcttatgcccgaggtggtggactgga 435
                || || ||||||||||||||||| ||  |||| ||  ||||||||||||||||||||||
Sbjct: 4833420 cctgaggattactggtatagatgactcgaattctgcccatgcccgaggtggtggactgga 4833479

                                                                           
Query: 436     tatagttgggcgtaggttatgcaacattgcccagtcatgttgtctgccctttgagttcaa 495
               |||||| || ||  |||||| ||| ||||||||||||||| |||||||||||||||||||
Sbjct: 4833480 tatagtcggacggcggttattcaatattgcccagtcatgtggtctgccctttgagttcaa 4833539

                     
Query: 496     tgctgt 501
               ||||||
Sbjct: 4833540 tgctgt 4833545

---

>gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBb0019D17, from chromosome 3, complete sequence
          Length = 129658

 Score =  402 bits (203), Expect = e-109
 Identities = 415/486 (85%), Gaps = 6/486 (1%)
 Strand = Plus / Minus

                                                                        
Query: 16   ggacttgctgatatcagagttacagaagatggtttccgtgtctggagaaccaatccaacg 75
            ||||||||||||||| ||||||  ||| ||||||||| | |||||||| || || |||||
Sbjct: 2389 ggacttgctgatatctgagttaaggaacatggtttccatttctggagagccgatgcaacg 2330

                                                                        
Query: 76   tctgggagcgtatatgttggaaggccttgttgcgaggcgttattctactggacatgcgtt 135
             || ||||| ||||||||||||||||||||||| |||| || ||| ||||| ||||| ||
Sbjct: 2329 ccttggagcctatatgttggaaggccttgttgccaggctttcttcgactgggcatgcctt 2270

                                                                        
Query: 136  gtataaatctctgaagtgtaaggaacctcaacctacaaattcagagctcatgtcctacat 195
             |||||||| ||||||||||| |||      ||||| |  |  ||||||||||| || ||
Sbjct: 2269 atataaatccctgaagtgtaaagaa------cctactagcttcgagctcatgtcttatat 2216

                                                                        
Query: 196  gcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaatggtgc 255
            |||||| |||||||| || || || || ||||| ||||||||||||||||||||||| ||
Sbjct: 2215 gcatctcctctatgagatatgcccgtttttcaagtttggttacatgtctgccaatggagc 2156

                                                                        
Query: 256  tatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaattgctca 315
             || || |||||||||||||| ||||||||| |||||||||| || ||||||||||||||
Sbjct: 2155 aattgcagaggctgttaagggcgagaactttgttcacatcatcgacttccaaattgctca 2096

                                                                        
Query: 316  agggagccagtgggtaactatgatacaggcccttgctgcgagggctagcggaccaccata 375
            ||| |||||||||| |||||||||||||||||||||||| ||| || | |||||||||||
Sbjct: 2095 aggtagccagtgggcaactatgatacaggcccttgctgcaaggcctgggggaccaccata 2036

                                                                        
Query: 376  tctaagaattactggtatagatgattcagattcggcttatgcccgaggtggtggactgga 435
             || || ||||||||||||||||| ||  |||| ||  ||||||||||||||||||||||
Sbjct: 2035 cctgaggattactggtatagatgactcgaattctgcccatgcccgaggtggtggactgga 1976

                                                                        
Query: 436  tatagttgggcgtaggttatgcaacattgcccagtcatgttgtctgccctttgagttcaa 495
            |||||| || ||  |||||| ||| ||||||||||||||| |||||||||||||||||||
Sbjct: 1975 tatagtcggacggcggttattcaatattgcccagtcatgtggtctgccctttgagttcaa 1916

                  
Query: 496  tgctgt 501
            ||||||
Sbjct: 1915 tgctgt 1910

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  402 bits (203), Expect = e-109
 Identities = 415/486 (85%), Gaps = 6/486 (1%)
 Strand = Plus / Plus

                                                                           
Query: 16      ggacttgctgatatcagagttacagaagatggtttccgtgtctggagaaccaatccaacg 75
               ||||||||||||||| ||||||  ||| ||||||||| | |||||||| || || |||||
Sbjct: 4833181 ggacttgctgatatctgagttaaggaacatggtttccatttctggagagccgatgcaacg 4833240

                                                                           
Query: 76      tctgggagcgtatatgttggaaggccttgttgcgaggcgttattctactggacatgcgtt 135
                || ||||| ||||||||||||||||||||||| |||| || ||| ||||| ||||| ||
Sbjct: 4833241 ccttggagcctatatgttggaaggccttgttgccaggctttcttcgactgggcatgcctt 4833300

                                                                           
Query: 136     gtataaatctctgaagtgtaaggaacctcaacctacaaattcagagctcatgtcctacat 195
                |||||||| ||||||||||| |||      ||||| |  |  ||||||||||| || ||
Sbjct: 4833301 atataaatccctgaagtgtaaagaa------cctactagcttcgagctcatgtcttatat 4833354

                                                                           
Query: 196     gcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaatggtgc 255
               |||||| |||||||| || || || || ||||| ||||||||||||||||||||||| ||
Sbjct: 4833355 gcatctcctctatgagatatgcccgtttttcaagtttggttacatgtctgccaatggagc 4833414

                                                                           
Query: 256     tatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaattgctca 315
                || || |||||||||||||| ||||||||| |||||||||| || ||||||||||||||
Sbjct: 4833415 aattgcagaggctgttaagggcgagaactttgttcacatcatcgacttccaaattgctca 4833474

                                                                           
Query: 316     agggagccagtgggtaactatgatacaggcccttgctgcgagggctagcggaccaccata 375
               ||| |||||||||| |||||||||||||||||||||||| ||| || | |||||||||||
Sbjct: 4833475 aggtagccagtgggcaactatgatacaggcccttgctgcaaggcctgggggaccaccata 4833534

                                                                           
Query: 376     tctaagaattactggtatagatgattcagattcggcttatgcccgaggtggtggactgga 435
                || || ||||||||||||||||| ||  |||| ||  ||||||||||||||||||||||
Sbjct: 4833535 cctgaggattactggtatagatgactcgaattctgcccatgcccgaggtggtggactgga 4833594

                                                                           
Query: 436     tatagttgggcgtaggttatgcaacattgcccagtcatgttgtctgccctttgagttcaa 495
               |||||| || ||  |||||| ||| ||||||||||||||| |||||||||||||||||||
Sbjct: 4833595 tatagtcggacggcggttattcaatattgcccagtcatgtggtctgccctttgagttcaa 4833654

                     
Query: 496     tgctgt 501
               ||||||
Sbjct: 4833655 tgctgt 4833660

---

>dbj|AK073386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041E22, full
            insert sequence
          Length = 2582

 Score =  402 bits (203), Expect = e-109
 Identities = 415/486 (85%), Gaps = 6/486 (1%)
 Strand = Plus / Plus

                                                                        
Query: 16   ggacttgctgatatcagagttacagaagatggtttccgtgtctggagaaccaatccaacg 75
            ||||||||||||||| ||||||  ||| ||||||||| | |||||||| || || |||||
Sbjct: 1039 ggacttgctgatatctgagttaaggaacatggtttccatttctggagagccgatgcaacg 1098

                                                                        
Query: 76   tctgggagcgtatatgttggaaggccttgttgcgaggcgttattctactggacatgcgtt 135
             || ||||| ||||||||||||||||||||||| |||| || ||| ||||| ||||| ||
Sbjct: 1099 ccttggagcctatatgttggaaggccttgttgccaggctttcttcgactgggcatgcctt 1158

                                                                        
Query: 136  gtataaatctctgaagtgtaaggaacctcaacctacaaattcagagctcatgtcctacat 195
             |||||||| ||||||||||| |||      ||||| |  |  ||||||||||| || ||
Sbjct: 1159 atataaatccctgaagtgtaaagaa------cctactagcttcgagctcatgtcttatat 1212

                                                                        
Query: 196  gcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaatggtgc 255
            |||||| |||||||| || || || || ||||| ||||||||||||||||||||||| ||
Sbjct: 1213 gcatctcctctatgagatatgcccgtttttcaagtttggttacatgtctgccaatggagc 1272

                                                                        
Query: 256  tatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaattgctca 315
             || || |||||||||||||| ||||||||| |||||||||| || ||||||||||||||
Sbjct: 1273 aattgcagaggctgttaagggcgagaactttgttcacatcatcgacttccaaattgctca 1332

                                                                        
Query: 316  agggagccagtgggtaactatgatacaggcccttgctgcgagggctagcggaccaccata 375
            ||| |||||||||| |||||||||||||||||||||||| ||| || | |||||||||||
Sbjct: 1333 aggtagccagtgggcaactatgatacaggcccttgctgcaaggcctgggggaccaccata 1392

                                                                        
Query: 376  tctaagaattactggtatagatgattcagattcggcttatgcccgaggtggtggactgga 435
             || || ||||||||||||||||| ||  |||| ||  ||||||||||||||||||||||
Sbjct: 1393 cctgaggattactggtatagatgactcgaattctgcccatgcccgaggtggtggactgga 1452

                                                                        
Query: 436  tatagttgggcgtaggttatgcaacattgcccagtcatgttgtctgccctttgagttcaa 495
            |||||| || ||  |||||| ||| ||||||||||||||| |||||||||||||||||||
Sbjct: 1453 tatagtcggacggcggttattcaatattgcccagtcatgtggtctgccctttgagttcaa 1512

                  
Query: 496  tgctgt 501
            ||||||
Sbjct: 1513 tgctgt 1518

---

>gb|AY109543.1| Zea mays CL854_1 mRNA sequence
          Length = 2341

 Score =  287 bits (145), Expect = 2e-74
 Identities = 380/460 (82%)
 Strand = Plus / Plus

                                                                        
Query: 42   agatggtttccgtgtctggagaaccaatccaacgtctgggagcgtatatgttggaaggcc 101
            |||||||||| || ||||| ||||| || |||||||||||||| || |||||||||||||
Sbjct: 915  agatggtttctgtctctggtgaaccgatgcaacgtctgggagcttacatgttggaaggcc 974

                                                                        
Query: 102  ttgttgcgaggcgttattctactggacatgcgttgtataaatctctgaagtgtaaggaac 161
            |  ||||||||| || ||  ||||||||||| |||||||||||||||||||| || || |
Sbjct: 975  tcattgcgaggctttctttcactggacatgccttgtataaatctctgaagtgcaaagagc 1034

                                                                        
Query: 162  ctcaacctacaaattcagagctcatgtcctacatgcatcttctctatgatatctgtccat 221
            ||    |||| | ||| |||||| ||||||| ||||||||||| ||||| ||||||||||
Sbjct: 1035 ctgtggctacgagttctgagctcttgtcctatatgcatcttctttatgagatctgtccat 1094

                                                                        
Query: 222  tcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaagggtgaga 281
            ||||||| || ||||||||||||||||||||| | ||||| || || |||||     |  
Sbjct: 1095 tcttcaagttcggttacatgtctgccaatggtcccatagctgaagcggttaannnnnaag 1154

                                                                        
Query: 282  actttattcacatcattgatttccaaattgctcaagggagccagtgggtaactatgatac 341
            || ||||||||||||| ||||| ||||| ||||| || || |||||| | ||||||||||
Sbjct: 1155 acattattcacatcatcgattttcaaatcgctcagggtagtcagtggatgactatgatac 1214

                                                                        
Query: 342  aggcccttgctgcgagggctagcggaccaccatatctaagaattactggtatagatgatt 401
            ||||||||||| | ||| || |  | | |||||| ||||| || ||||| |||||||| |
Sbjct: 1215 aggcccttgcttcaaggcctgggaggcgaccatacctaaggatcactggcatagatgact 1274

                                                                        
Query: 402  cagattcggcttatgcccgaggtggtggactggatatagttgggcgtaggttatgcaaca 461
            |  |||| ||| ||||||||||||||||||||||||| ||||| |  |||||   ||  |
Sbjct: 1275 cgaattctgctcatgcccgaggtggtggactggatatggttggacagaggttgcacagaa 1334

                                                    
Query: 462  ttgcccagtcatgttgtctgccctttgagttcaatgctgt 501
            | |||||||||||| |||||||||| ||||||||||||||
Sbjct: 1335 tggcccagtcatgtggtctgcccttcgagttcaatgctgt 1374

---

>ref|NM_196102.1| Oryza sativa (japonica cultivar-group) putative SCARECROW gene
           regulator-like (OJ1003C07.9), mRNA
          Length = 1575

 Score =  212 bits (107), Expect = 8e-52
 Identities = 269/323 (83%)
 Strand = Plus / Plus

                                                                       
Query: 179 gagctcatgtcctacatgcatcttctctatgatatctgtccattcttcaaatttggttac 238
           ||||||||||| |||||||||||||| || || || || |||||||||||||||||||| 
Sbjct: 676 gagctcatgtcatacatgcatcttctttacgagatatgcccattcttcaaatttggttat 735

                                                                       
Query: 239 atgtctgccaatggtgctatagccgaggctgttaagggtgagaactttattcacatcatt 298
           ||||| || ||||| || || || || ||| ||||||| ||||||||| ||||||| |||
Sbjct: 736 atgtcagctaatggcgccatcgctgaagctattaagggagagaactttgttcacataatt 795

                                                                       
Query: 299 gatttccaaattgctcaagggagccagtgggtaactatgatacaggcccttgctgcgagg 358
           || ||||||||||| |||||||| || ||| | ||  | |||||||||||||| ||||||
Sbjct: 796 gacttccaaattgcacaagggagtcaatggatgacattaatacaggcccttgcagcgagg 855

                                                                       
Query: 359 gctagcggaccaccatatctaagaattactggtatagatgattcagattcggcttatgcc 418
            || | |||||||||| |||| |||| |||||||||||||| ||  |||| ||||| |||
Sbjct: 856 cctggaggaccaccatttctacgaatcactggtatagatgactcgaattctgcttacgcc 915

                                                                       
Query: 419 cgaggtggtggactggatatagttgggcgtaggttatgcaacattgcccagtcatgttgt 478
            |||||||||||||||||||||||||    || || |  ||  |||| ||||| | | ||
Sbjct: 916 agaggtggtggactggatatagttggtatgagattgtataaagttgctcagtcttttggt 975

                                  
Query: 479 ctgccctttgagttcaatgctgt 501
           |||||||||||||||||||||||
Sbjct: 976 ctgccctttgagttcaatgctgt 998



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 86  tatatgttggaaggccttgttgc 108
           |||||||||||||||||||||||
Sbjct: 589 tatatgttggaaggccttgttgc 611

---

>gb|AC113335.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OJ1003C07, from chromosome 10, complete
             sequence
          Length = 115188

 Score =  212 bits (107), Expect = 8e-52
 Identities = 269/323 (83%)
 Strand = Plus / Plus

                                                                         
Query: 179   gagctcatgtcctacatgcatcttctctatgatatctgtccattcttcaaatttggttac 238
             ||||||||||| |||||||||||||| || || || || |||||||||||||||||||| 
Sbjct: 68093 gagctcatgtcatacatgcatcttctttacgagatatgcccattcttcaaatttggttat 68152

                                                                         
Query: 239   atgtctgccaatggtgctatagccgaggctgttaagggtgagaactttattcacatcatt 298
             ||||| || ||||| || || || || ||| ||||||| ||||||||| ||||||| |||
Sbjct: 68153 atgtcagctaatggcgccatcgctgaagctattaagggagagaactttgttcacataatt 68212

                                                                         
Query: 299   gatttccaaattgctcaagggagccagtgggtaactatgatacaggcccttgctgcgagg 358
             || ||||||||||| |||||||| || ||| | ||  | |||||||||||||| ||||||
Sbjct: 68213 gacttccaaattgcacaagggagtcaatggatgacattaatacaggcccttgcagcgagg 68272

                                                                         
Query: 359   gctagcggaccaccatatctaagaattactggtatagatgattcagattcggcttatgcc 418
              || | |||||||||| |||| |||| |||||||||||||| ||  |||| ||||| |||
Sbjct: 68273 cctggaggaccaccatttctacgaatcactggtatagatgactcgaattctgcttacgcc 68332

                                                                         
Query: 419   cgaggtggtggactggatatagttgggcgtaggttatgcaacattgcccagtcatgttgt 478
              |||||||||||||||||||||||||    || || |  ||  |||| ||||| | | ||
Sbjct: 68333 agaggtggtggactggatatagttggtatgagattgtataaagttgctcagtcttttggt 68392

                                    
Query: 479   ctgccctttgagttcaatgctgt 501
             |||||||||||||||||||||||
Sbjct: 68393 ctgccctttgagttcaatgctgt 68415



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 86    tatatgttggaaggccttgttgc 108
             |||||||||||||||||||||||
Sbjct: 68006 tatatgttggaaggccttgttgc 68028

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  212 bits (107), Expect = 8e-52
 Identities = 269/323 (83%)
 Strand = Plus / Minus

                                                                            
Query: 179      gagctcatgtcctacatgcatcttctctatgatatctgtccattcttcaaatttggttac 238
                ||||||||||| |||||||||||||| || || || || |||||||||||||||||||| 
Sbjct: 11090964 gagctcatgtcatacatgcatcttctttacgagatatgcccattcttcaaatttggttat 11090905

                                                                            
Query: 239      atgtctgccaatggtgctatagccgaggctgttaagggtgagaactttattcacatcatt 298
                ||||| || ||||| || || || || ||| ||||||| ||||||||| ||||||| |||
Sbjct: 11090904 atgtcagctaatggcgccatcgctgaagctattaagggagagaactttgttcacataatt 11090845

                                                                            
Query: 299      gatttccaaattgctcaagggagccagtgggtaactatgatacaggcccttgctgcgagg 358
                || ||||||||||| |||||||| || ||| | ||  | |||||||||||||| ||||||
Sbjct: 11090844 gacttccaaattgcacaagggagtcaatggatgacattaatacaggcccttgcagcgagg 11090785

                                                                            
Query: 359      gctagcggaccaccatatctaagaattactggtatagatgattcagattcggcttatgcc 418
                 || | |||||||||| |||| |||| |||||||||||||| ||  |||| ||||| |||
Sbjct: 11090784 cctggaggaccaccatttctacgaatcactggtatagatgactcgaattctgcttacgcc 11090725

                                                                            
Query: 419      cgaggtggtggactggatatagttgggcgtaggttatgcaacattgcccagtcatgttgt 478
                 |||||||||||||||||||||||||    || || |  ||  |||| ||||| | | ||
Sbjct: 11090724 agaggtggtggactggatatagttggtatgagattgtataaagttgctcagtcttttggt 11090665

                                       
Query: 479      ctgccctttgagttcaatgctgt 501
                |||||||||||||||||||||||
Sbjct: 11090664 ctgccctttgagttcaatgctgt 11090642



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 86       tatatgttggaaggccttgttgc 108
                |||||||||||||||||||||||
Sbjct: 11091051 tatatgttggaaggccttgttgc 11091029

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  212 bits (107), Expect = 8e-52
 Identities = 269/323 (83%)
 Strand = Plus / Minus

                                                                            
Query: 179      gagctcatgtcctacatgcatcttctctatgatatctgtccattcttcaaatttggttac 238
                ||||||||||| |||||||||||||| || || || || |||||||||||||||||||| 
Sbjct: 11097404 gagctcatgtcatacatgcatcttctttacgagatatgcccattcttcaaatttggttat 11097345

                                                                            
Query: 239      atgtctgccaatggtgctatagccgaggctgttaagggtgagaactttattcacatcatt 298
                ||||| || ||||| || || || || ||| ||||||| ||||||||| ||||||| |||
Sbjct: 11097344 atgtcagctaatggcgccatcgctgaagctattaagggagagaactttgttcacataatt 11097285

                                                                            
Query: 299      gatttccaaattgctcaagggagccagtgggtaactatgatacaggcccttgctgcgagg 358
                || ||||||||||| |||||||| || ||| | ||  | |||||||||||||| ||||||
Sbjct: 11097284 gacttccaaattgcacaagggagtcaatggatgacattaatacaggcccttgcagcgagg 11097225

                                                                            
Query: 359      gctagcggaccaccatatctaagaattactggtatagatgattcagattcggcttatgcc 418
                 || | |||||||||| |||| |||| |||||||||||||| ||  |||| ||||| |||
Sbjct: 11097224 cctggaggaccaccatttctacgaatcactggtatagatgactcgaattctgcttacgcc 11097165

                                                                            
Query: 419      cgaggtggtggactggatatagttgggcgtaggttatgcaacattgcccagtcatgttgt 478
                 |||||||||||||||||||||||||    || || |  ||  |||| ||||| | | ||
Sbjct: 11097164 agaggtggtggactggatatagttggtatgagattgtataaagttgctcagtcttttggt 11097105

                                       
Query: 479      ctgccctttgagttcaatgctgt 501
                |||||||||||||||||||||||
Sbjct: 11097104 ctgccctttgagttcaatgctgt 11097082



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 86       tatatgttggaaggccttgttgc 108
                |||||||||||||||||||||||
Sbjct: 11097491 tatatgttggaaggccttgttgc 11097469

---

>gb|BT014572.1| Lycopersicon esculentum clone 134027R, mRNA sequence
          Length = 2086

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                        
Query: 296  attgatttccaaattgctcaagggagccagtgggtaactatgat 339
            |||||||| ||||||||||||||||||||||||||  |||||||
Sbjct: 1143 attgattttcaaattgctcaagggagccagtgggtgcctatgat 1186



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 223  cttcaaatttggttacatgtctgccaatggtgc 255
            |||||||||||| |||||||| || ||||||||
Sbjct: 1070 cttcaaatttggatacatgtcagctaatggtgc 1102

---

>emb|BX831005.1|CNS0A0O3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS48ZD10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1693

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 113/140 (80%)
 Strand = Plus / Plus

                                                                       
Query: 191 tacatgcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaat 250
           ||||||||  ||||||||||  | ||||| | |||||| ||||| ||||||||| | |||
Sbjct: 727 tacatgcacattctctatgaggtttgtccttacttcaagtttggatacatgtcttcaaat 786

                                                                       
Query: 251 ggtgctatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaatt 310
           |||||||| || |||||  | ||||  ||||||    ||||||| |||||||||||||| 
Sbjct: 787 ggtgctattgctgaggcaatgaaggaagagaacagagttcacattattgatttccaaatc 846

                               
Query: 311 gctcaagggagccagtgggt 330
           | ||||||||| || |||||
Sbjct: 847 ggtcaagggagtcaatgggt 866

---

>ref|NM_203174.1| Arabidopsis thaliana PAT1 (PHYTOCHROME A SIGNAL TRANSDUCTION 1);
           transcription factor AT5G48150 (PAT1) transcript variant
           AT5G48150.2 mRNA, complete cds
          Length = 1927

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Plus

                                                                       
Query: 191 tacatgcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaat 250
           ||||||||  ||||||||||  | ||||| | |||||| ||||| |||||||| || |||
Sbjct: 802 tacatgcacattctctatgaggtttgtccttacttcaagtttggatacatgtcagcaaat 861

                                                                       
Query: 251 ggtgctatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaatt 310
           |||||||| || |||||  | ||||  || |||    ||||||| |||||||||||||| 
Sbjct: 862 ggtgctattgctgaggcaatgaaggaagaaaacagagttcacattattgatttccaaatc 921

                               
Query: 311 gctcaagggagccagtgggt 330
           | ||||||||| || |||||
Sbjct: 922 ggtcaagggagtcaatgggt 941

---

>ref|NM_124189.3| Arabidopsis thaliana PAT1 (PHYTOCHROME A SIGNAL TRANSDUCTION 1);
           transcription factor AT5G48150 (PAT1) transcript variant
           AT5G48150.1 mRNA, complete cds
          Length = 1852

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Plus

                                                                       
Query: 191 tacatgcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaat 250
           ||||||||  ||||||||||  | ||||| | |||||| ||||| |||||||| || |||
Sbjct: 727 tacatgcacattctctatgaggtttgtccttacttcaagtttggatacatgtcagcaaat 786

                                                                       
Query: 251 ggtgctatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaatt 310
           |||||||| || |||||  | ||||  || |||    ||||||| |||||||||||||| 
Sbjct: 787 ggtgctattgctgaggcaatgaaggaagaaaacagagttcacattattgatttccaaatc 846

                               
Query: 311 gctcaagggagccagtgggt 330
           | ||||||||| || |||||
Sbjct: 847 ggtcaagggagtcaatgggt 866

---

>gb|BT025326.1| Arabidopsis thaliana At5g48150 mRNA, complete cds
          Length = 1473

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Plus

                                                                       
Query: 191 tacatgcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaat 250
           ||||||||  ||||||||||  | ||||| | |||||| ||||| |||||||| || |||
Sbjct: 586 tacatgcacattctctatgaggtttgtccttacttcaagtttggatacatgtcagcaaat 645

                                                                       
Query: 251 ggtgctatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaatt 310
           |||||||| || |||||  | ||||  || |||    ||||||| |||||||||||||| 
Sbjct: 646 ggtgctattgctgaggcaatgaaggaagaaaacagagttcacattattgatttccaaatc 705

                               
Query: 311 gctcaagggagccagtgggt 330
           | ||||||||| || |||||
Sbjct: 706 ggtcaagggagtcaatgggt 725

---

>emb|BX831686.1|CNS0A10E Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH23ZG07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1756

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Plus

                                                                       
Query: 191 tacatgcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaat 250
           ||||||||  ||||||||||  | ||||| | |||||| ||||| |||||||| || |||
Sbjct: 802 tacatgcacattctctatgaggtttgtccttacttcaagtttggatacatgtcagcaaat 861

                                                                       
Query: 251 ggtgctatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaatt 310
           |||||||| || |||||  | ||||  || |||    ||||||| |||||||||||||| 
Sbjct: 862 ggtgctattgctgaggcaatgaaggaagaaaacagagttcacattattgatttccaaatc 921

                               
Query: 311 gctcaagggagccagtgggt 330
           | ||||||||| || |||||
Sbjct: 922 ggtcaagggagtcaatgggt 941

---

>gb|AF153443.1|AF153443 Arabidopsis thaliana phytochrome A signal transduction 1 protein
           (PAT1) mRNA, complete cds
          Length = 1793

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Plus

                                                                       
Query: 191 tacatgcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaat 250
           ||||||||  ||||||||||  | ||||| | |||||| ||||| |||||||| || |||
Sbjct: 715 tacatgcacattctctatgaggtttgtccttacttcaagtttggatacatgtcagcaaat 774

                                                                       
Query: 251 ggtgctatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaatt 310
           |||||||| || |||||  | ||||  || |||    ||||||| |||||||||||||| 
Sbjct: 775 ggtgctattgctgaggcaatgaaggaagaaaacagagttcacattattgatttccaaatc 834

                               
Query: 311 gctcaagggagccagtgggt 330
           | ||||||||| || |||||
Sbjct: 835 ggtcaagggagtcaatgggt 854

---

>dbj|AK117483.1| Arabidopsis thaliana At5g48150 mRNA for putative SCARECROW gene
           regulator, complete cds, clone: RAFL17-10-L05
          Length = 1461

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Plus

                                                                       
Query: 191 tacatgcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaat 250
           ||||||||  ||||||||||  | ||||| | |||||| ||||| |||||||| || |||
Sbjct: 446 tacatgcacattctctatgaggtttgtccttacttcaagtttggatacatgtcagcaaat 505

                                                                       
Query: 251 ggtgctatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaatt 310
           |||||||| || |||||  | ||||  || |||    ||||||| |||||||||||||| 
Sbjct: 506 ggtgctattgctgaggcaatgaaggaagaaaacagagttcacattattgatttccaaatc 565

                               
Query: 311 gctcaagggagccagtgggt 330
           | ||||||||| || |||||
Sbjct: 566 ggtcaagggagtcaatgggt 585

---

>dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIF21
          Length = 59372

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Minus

                                                                         
Query: 191   tacatgcatcttctctatgatatctgtccattcttcaaatttggttacatgtctgccaat 250
             ||||||||  ||||||||||  | ||||| | |||||| ||||| |||||||| || |||
Sbjct: 15083 tacatgcacattctctatgaggtttgtccttacttcaagtttggatacatgtcagcaaat 15024

                                                                         
Query: 251   ggtgctatagccgaggctgttaagggtgagaactttattcacatcattgatttccaaatt 310
             |||||||| || |||||  | ||||  || |||    ||||||| |||||||||||||| 
Sbjct: 15023 ggtgctattgctgaggcaatgaaggaagaaaacagagttcacattattgatttccaaatc 14964

                                 
Query: 311   gctcaagggagccagtgggt 330
             | ||||||||| || |||||
Sbjct: 14963 ggtcaagggagtcaatgggt 14944

---

>ref|NM_126521.2| Arabidopsis thaliana SCL21 (SCARECROW-LIKE 21); transcription
           factor AT2G04890 (SCL21) mRNA, complete cds
          Length = 2220

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 287 attcacatcattgatttccaaattgctcaagggagccagtgg 328
           |||||||| ||||| ||||||||||  |||||||||||||||
Sbjct: 656 attcacattattgacttccaaattggacaagggagccagtgg 697

---

>emb|CR955006.2| Medicago truncatula chromosome 5 clone mth2-5i4, COMPLETE SEQUENCE
          Length = 108871

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 223   cttcaaatttggttacatgtctgccaatgg 252
             |||||||||||||||||||||||| |||||
Sbjct: 75001 cttcaaatttggttacatgtctgcaaatgg 74972



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 299   gatttccaaattgctcaagggagcca 324
             |||||||||||||||||||| |||||
Sbjct: 74925 gatttccaaattgctcaaggaagcca 74900

---

>gb|AC007211.6| Arabidopsis thaliana chromosome 2 BAC F1O13 genomic sequence,
            complete sequence
          Length = 103889

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 287  attcacatcattgatttccaaattgctcaagggagccagtgg 328
            |||||||| ||||| ||||||||||  |||||||||||||||
Sbjct: 2914 attcacattattgacttccaaattggacaagggagccagtgg 2873

---

>gb|AC006955.6| Arabidopsis thaliana chromosome 2 clone F28I8 map RNS1, complete
            sequence
          Length = 116217

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                      
Query: 287  attcacatcattgatttccaaattgctcaagggagccagtgg 328
            |||||||| ||||| ||||||||||  |||||||||||||||
Sbjct: 7874 attcacattattgacttccaaattggacaagggagccagtgg 7915

---

>dbj|AK221099.1| Arabidopsis thaliana mRNA for putative SCARECROW gene regulator,
           complete cds, clone: RAFL22-85-M15
          Length = 1526

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 287 attcacatcattgatttccaaattgctcaagggagccagtgg 328
           |||||||| ||||| ||||||||||  |||||||||||||||
Sbjct: 629 attcacattattgacttccaaattggacaagggagccagtgg 670

---

>emb|BX818810.1|CNS0A9T0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB15ZE12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1588

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 287 attcacatcattgatttccaaattgctcaagggagccagtgg 328
           |||||||| ||||| ||||||||||  |||||||||||||||
Sbjct: 637 attcacattattgacttccaaattggacaagggagccagtgg 678

---

>gb|AF210732.1|AF210732 Arabidopsis thaliana scarecrow-like 21 (SCL21) mRNA, complete cds
          Length = 1634

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 287 attcacatcattgatttccaaattgctcaagggagccagtgg 328
           |||||||| ||||| ||||||||||  |||||||||||||||
Sbjct: 656 attcacattattgacttccaaattggacaagggagccagtgg 697

---

>emb|AJ538575.1|NTA538575 Nicotiana tabacum cDNA-AFLP-fragment BC3-M24-001
          Length = 445

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 287 attcacatcattgatttccaaattgctcaaggga 320
           ||||||||||| |||||||||||||| |||||||
Sbjct: 176 attcacatcatagatttccaaattgcgcaaggga 209



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 230 tttggttacatgtctgccaatggtgctatagc 261
           |||||||||||| |||| |||||||| |||||
Sbjct: 119 tttggttacatggctgcaaatggtgcaatagc 150

---

>dbj|AK175990.1| Arabidopsis thaliana mRNA for putative SCARECROW gene regulator,
           complete cds, clone: RAFL22-68-E12
          Length = 1526

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 287 attcacatcattgatttccaaattgctcaagggagccagtgg 328
           |||||||| ||||| ||||||||||  |||||||||||||||
Sbjct: 629 attcacattattgacttccaaattggacaagggagccagtgg 670

---

>dbj|AK175210.1| Arabidopsis thaliana mRNA for putative SCARECROW gene regulator,
           complete cds, clone: RAFL21-63-H23
          Length = 1617

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 287 attcacatcattgatttccaaattgctcaagggagccagtgg 328
           |||||||| ||||| ||||||||||  |||||||||||||||
Sbjct: 629 attcacattattgacttccaaattggacaagggagccagtgg 670

---

>emb|BX821639.1|CNS0A92G Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL5ZG09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1497

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 287 attcacatcattgatttccaaattgctcaagggagccagt 326
           |||||||| ||||| ||||||||||  |||||||||||||
Sbjct: 606 attcacattattgacttccaaattggacaagggagccagt 645



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 78  tgggagcgtatatgttggaaggccttgttgcgaggc 113
           ||||||| |||||||| ||||| |||||||||||||
Sbjct: 403 tgggagcttatatgttagaagggcttgttgcgaggc 438

---

>ref|XM_478905.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2224

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                        
Query: 214  ctgtccattcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaa 273
            |||||| | |||||| ||||| || ||||| || ||||||||||| || |||||||| ||
Sbjct: 1082 ctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaa 1141

               
Query: 274  ggg 276
            |||
Sbjct: 1142 ggg 1144

---

>ref|XM_506430.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1127_E01.113 mRNA
          Length = 2234

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                        
Query: 214  ctgtccattcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaa 273
            |||||| | |||||| ||||| || ||||| || ||||||||||| || |||||||| ||
Sbjct: 1082 ctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaa 1141

               
Query: 274  ggg 276
            |||
Sbjct: 1142 ggg 1144

---

>dbj|AK061928.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-C06, full
           insert sequence
          Length = 1343

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 214 ctgtccattcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaa 273
           |||||| | |||||| ||||| || ||||| || ||||||||||| || |||||||| ||
Sbjct: 168 ctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaa 227

              
Query: 274 ggg 276
           |||
Sbjct: 228 ggg 230

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                            
Query: 214      ctgtccattcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaa 273
                |||||| | |||||| ||||| || ||||| || ||||||||||| || |||||||| ||
Sbjct: 23599317 ctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaa 23599376

                   
Query: 274      ggg 276
                |||
Sbjct: 23599377 ggg 23599379



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                            
Query: 277      tgagaactttattcacatcattgatttccaaattgctcaaggga 320
                |||||||  ||| ||||| |||||||| || |||||||||||||
Sbjct: 21564998 tgagaacaatatccacataattgattttcagattgctcaaggga 21565041

---

>gb|AY062210.1| Oryza sativa chitin-inducible gibberellin-responsive protein (GIGR2)
            mRNA, complete cds
          Length = 2157

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                        
Query: 214  ctgtccattcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaa 273
            |||||| | |||||| ||||| || ||||| || ||||||||||| || |||||||| ||
Sbjct: 1071 ctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaa 1130

               
Query: 274  ggg 276
            |||
Sbjct: 1131 ggg 1133

---

>emb|AJ538615.1|NTA538615 Nicotiana tabacum cDNA-AFLP-fragment BC3-M42-008
          Length = 341

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 227 aaatttggttacatgtctgccaatggtgctatagc 261
           ||||||||||||||| |||| |||||||| |||||
Sbjct: 135 aaatttggttacatggctgcaaatggtgcaatagc 169

---

>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1127_E01
          Length = 123787

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                         
Query: 214   ctgtccattcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaa 273
             |||||| | |||||| ||||| || ||||| || ||||||||||| || |||||||| ||
Sbjct: 51758 ctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaa 51817

                
Query: 274   ggg 276
             |||
Sbjct: 51818 ggg 51820

---

>dbj|AK122131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133B20, full
            insert sequence
          Length = 2272

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                        
Query: 214  ctgtccattcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaa 273
            |||||| | |||||| ||||| || ||||| || ||||||||||| || |||||||| ||
Sbjct: 1130 ctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaa 1189

               
Query: 274  ggg 276
            |||
Sbjct: 1190 ggg 1192

---

>dbj|AK098890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M01, full
            insert sequence
          Length = 2224

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                        
Query: 214  ctgtccattcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaa 273
            |||||| | |||||| ||||| || ||||| || ||||||||||| || |||||||| ||
Sbjct: 1082 ctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaa 1141

               
Query: 274  ggg 276
            |||
Sbjct: 1142 ggg 1144

---

>dbj|AK073470.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044I02, full
            insert sequence
          Length = 2234

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                        
Query: 214  ctgtccattcttcaaatttggttacatgtctgccaatggtgctatagccgaggctgttaa 273
            |||||| | |||||| ||||| || ||||| || ||||||||||| || |||||||| ||
Sbjct: 1082 ctgtccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaa 1141

               
Query: 274  ggg 276
            |||
Sbjct: 1142 ggg 1144

---

>emb|Z99112.2|BSUB0009 Bacillus subtilis complete genome (section 9 of 21): from 1602883 to
             1807145
          Length = 204263

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 293   atcattgatttccaaattgctcaag 317
             ||||||||||| |||||||||||||
Sbjct: 70890 atcattgattttcaaattgctcaag 70914

---

>gb|AC148526.24| Medicago truncatula clone mth2-53k6, complete sequence
          Length = 89055

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 287  attcacatcattgatttccaaattgctcaagg 318
            |||||||| ||||| ||||||||||| |||||
Sbjct: 8951 attcacataattgacttccaaattgcacaagg 8982

---

>gb|AY312169.1| Zea mays homeobox transcription factor KNOTTED1 (kn1) gene, complete
            cds
          Length = 22402

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 216  gtccattcttcaaatttggt 235
            ||||||||||||||||||||
Sbjct: 7836 gtccattcttcaaatttggt 7817

---

>gb|AY727731.1| Anopheles funestus isolate 442 NADH dehydrogenase subunit 5 (ND5)
           gene, partial cds; mitochondrial
          Length = 834

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 216 gtccattcttcaaatttggttaca 239
           ||||||||||||| ||||||||||
Sbjct: 469 gtccattcttcaactttggttaca 492

---

>gb|AY727676.1| Anopheles funestus isolate 220 NADH dehydrogenase subunit 5 (ND5)
           gene, partial cds; mitochondrial
          Length = 834

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 216 gtccattcttcaaatttggttaca 239
           ||||||||||||| ||||||||||
Sbjct: 469 gtccattcttcaactttggttaca 492

---

>gb|AY260164.1| Zea mays KNOTTED1 (kn1) gene, complete cds
          Length = 9369

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 216  gtccattcttcaaatttggt 235
            ||||||||||||||||||||
Sbjct: 5253 gtccattcttcaaatttggt 5234

---

>gb|AY062209.1| Oryza sativa chitin-inducible gibberellin-responsive protein (CIGR1)
            mRNA, complete cds
          Length = 2104

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 277  tgagaactttattcacatcattgatttccaaattgctcaaggga 320
            |||||||  ||| ||||| |||||||| || |||||||||||||
Sbjct: 1051 tgagaacaatatccacataattgattttcagattgctcaaggga 1094

---

>dbj|AP004235.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0006G05
          Length = 56865

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 277   tgagaactttattcacatcattgatttccaaattgctcaaggga 320
             |||||||  ||| ||||| |||||||| || |||||||||||||
Sbjct: 11372 tgagaacaatatccacataattgattttcagattgctcaaggga 11415

---

>dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1582_D10
          Length = 103475

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                          
Query: 277    tgagaactttattcacatcattgatttccaaattgctcaaggga 320
              |||||||  ||| ||||| |||||||| || |||||||||||||
Sbjct: 102782 tgagaacaatatccacataattgattttcagattgctcaaggga 102825

---

>dbj|AK069266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012G08, full
            insert sequence
          Length = 2162

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 277  tgagaactttattcacatcattgatttccaaattgctcaaggga 320
            |||||||  ||| ||||| |||||||| || |||||||||||||
Sbjct: 1061 tgagaacaatatccacataattgattttcagattgctcaaggga 1104

---

>emb|BX842613.7| Zebrafish DNA sequence from clone CH211-227J9 in linkage group 19,
             complete sequence
          Length = 166128

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 488   gagttcaatgctgtaaatgc 507
             ||||||||||||||||||||
Sbjct: 45254 gagttcaatgctgtaaatgc 45273

---

>emb|AL772203.14| Mouse DNA sequence from clone RP23-398I1 on chromosome 4, complete
              sequence
          Length = 157996

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    ttctctatgatatctgtcca 220
              ||||||||||||||||||||
Sbjct: 135771 ttctctatgatatctgtcca 135752

---

>gb|DQ102955.1| Anopheles funestus KE52 from Kenya NADH dehydrogenase subunit 5
           (ND5) gene, partial cds; mitochondrial
          Length = 834

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 216 gtccattcttcaaatttggttaca 239
           ||||||||||||| ||||||||||
Sbjct: 469 gtccattcttcaactttggttaca 492

---

>gb|DQ102952.1| Anopheles funestus KE31 from Kenya NADH dehydrogenase subunit 5
           (ND5) gene, partial cds; mitochondrial
          Length = 834

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 216 gtccattcttcaaatttggttaca 239
           ||||||||||||| ||||||||||
Sbjct: 469 gtccattcttcaactttggttaca 492


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,037,665
Number of Sequences: 3902068
Number of extensions: 4037665
Number of successful extensions: 69319
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69082
Number of HSP's gapped (non-prelim): 231
length of query: 515
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 492
effective length of database: 17,143,297,704
effective search space: 8434502470368
effective search space used: 8434502470368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---