ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd1c18 |
|---|---|
| Clone Library Name | barley_pub |
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 246 bits (627), Expect = 4e-65 Identities = 127/192 (66%), Positives = 149/192 (77%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVLL GPPGTGKTLLAKA+AGEAG+PFFS+S SEFVEMFVG GA+RVRDLFK+AKE Sbjct: 204 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKEN 263 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP +IFIDE+DAVG RG NDER+QTLNQLLTEMDGF+ + +I++AATNRP L Sbjct: 264 APCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVL 323 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 DSAL RPGRF R+V V PD GR++IL VH R L E+ D +A TPG GADL Sbjct: 324 DSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLA--PEVSIDSIARRTPGFSGADL 381 Query: 533 ANIVNEAALLAA 568 AN++NEAA+L A Sbjct: 382 ANLLNEAAILTA 393
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 245 bits (625), Expect = 7e-65 Identities = 127/192 (66%), Positives = 151/192 (78%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVLL GPPGTGKTLLAKAVAGEAG+PFFS+S SEFVEMFVG GA+RVRDLF++AK Sbjct: 193 IPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKAN 252 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP I+FIDE+DAVG RG NDER+QTLNQLLTEMDGF+ + +I++AATNRP L Sbjct: 253 APCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPDVL 312 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 DSAL RPGRF R+V V PD GRR+IL VH R L +D ++ D +A TPG GADL Sbjct: 313 DSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDL--DKIARRTPGFTGADL 370 Query: 533 ANIVNEAALLAA 568 +N++NEAA+LAA Sbjct: 371 SNLLNEAAILAA 382
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 244 bits (623), Expect = 1e-64 Identities = 129/192 (67%), Positives = 151/192 (78%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I GVLL GPPGTGKTLLAKAVAGEAG+PFFS+S S+FVEMFVG GA+RVR LF++AK+A Sbjct: 219 IPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKA 278 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP+IIFIDE+DAVG RG NDER+QTLNQLL EMDGF+ + +IV+AATNR L Sbjct: 279 APAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVL 338 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF RKV VG PD++GR IL VH + PL ED ++ LVA TPG VGADL Sbjct: 339 DPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDL--KLVAQQTPGFVGADL 396 Query: 533 ANIVNEAALLAA 568 N++NEAAL+AA Sbjct: 397 ENVLNEAALVAA 408
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 244 bits (623), Expect = 1e-64 Identities = 129/192 (67%), Positives = 151/192 (78%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I GVLL GPPGTGKTLLAKAVAGEAG+PFFS+S S+FVEMFVG GA+RVR LF++AK+A Sbjct: 219 IPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKA 278 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP+IIFIDE+DAVG RG NDER+QTLNQLL EMDGF+ + +IV+AATNR L Sbjct: 279 APAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVL 338 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF RKV VG PD++GR IL VH + PL ED ++ LVA TPG VGADL Sbjct: 339 DPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDL--KLVAQQTPGFVGADL 396 Query: 533 ANIVNEAALLAA 568 N++NEAAL+AA Sbjct: 397 ENVLNEAALVAA 408
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 243 bits (621), Expect = 2e-64 Identities = 124/192 (64%), Positives = 153/192 (79%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVL+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F++AK+A Sbjct: 184 IPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKA 243 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP IIFIDE+DAVG RG +DER+QTLNQ+L EMDGF+ + +IV+AATNRP L Sbjct: 244 APCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVL 303 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R+V VG+PD+ GR +IL VH+R+VPL D I ++A TPG GADL Sbjct: 304 DPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPD--IDAAIIARGTPGFSGADL 361 Query: 533 ANIVNEAALLAA 568 AN+VNEAAL AA Sbjct: 362 ANLVNEAALFAA 373
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 243 bits (621), Expect = 2e-64 Identities = 124/192 (64%), Positives = 153/192 (79%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVL+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F++AK+A Sbjct: 184 IPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKA 243 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP IIFIDE+DAVG RG +DER+QTLNQ+L EMDGF+ + +IV+AATNRP L Sbjct: 244 APCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVL 303 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R+V VG+PD+ GR +IL VH+R+VPL D I ++A TPG GADL Sbjct: 304 DPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATD--IDAAIIARGTPGFSGADL 361 Query: 533 ANIVNEAALLAA 568 AN+VNEAAL AA Sbjct: 362 ANLVNEAALFAA 373
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 243 bits (621), Expect = 2e-64 Identities = 124/192 (64%), Positives = 153/192 (79%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVL+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F++AK+A Sbjct: 184 IPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKA 243 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP IIFIDE+DAVG RG +DER+QTLNQ+L EMDGF+ + +IV+AATNRP L Sbjct: 244 APCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVL 303 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R+V VG+PD+ GR +IL VH+R+VPL D I ++A TPG GADL Sbjct: 304 DPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATD--IDAAIIARGTPGFSGADL 361 Query: 533 ANIVNEAALLAA 568 AN+VNEAAL AA Sbjct: 362 ANLVNEAALFAA 373
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 243 bits (621), Expect = 2e-64 Identities = 124/192 (64%), Positives = 153/192 (79%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVL+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F++AK+A Sbjct: 184 IPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKA 243 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP IIFIDE+DAVG RG +DER+QTLNQ+L EMDGF+ + +IV+AATNRP L Sbjct: 244 APCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVL 303 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R+V VG+PD+ GR +IL VH+R+VPL D I ++A TPG GADL Sbjct: 304 DPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPD--IDAAIIARGTPGFSGADL 361 Query: 533 ANIVNEAALLAA 568 AN+VNEAAL AA Sbjct: 362 ANLVNEAALFAA 373
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 243 bits (621), Expect = 2e-64 Identities = 124/192 (64%), Positives = 153/192 (79%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVL+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F++AK+A Sbjct: 184 IPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKA 243 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP IIFIDE+DAVG RG +DER+QTLNQ+L EMDGF+ + +IV+AATNRP L Sbjct: 244 APCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVL 303 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R+V VG+PD+ GR +IL VH+R+VPL D I ++A TPG GADL Sbjct: 304 DPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPD--IDAAIIARGTPGFSGADL 361 Query: 533 ANIVNEAALLAA 568 AN+VNEAAL AA Sbjct: 362 ANLVNEAALFAA 373
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 243 bits (620), Expect = 3e-64 Identities = 122/192 (63%), Positives = 154/192 (80%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +G+L+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F+ A+++ Sbjct: 184 IPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKS 243 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP IIFIDE+DAVG RG +DER+QTLNQ+L EMDGFD + VI++AATNRP L Sbjct: 244 APCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGVILIAATNRPDVL 303 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R+V V +PD+ GR++IL VH+RKVPL ED + + ++A TPG GADL Sbjct: 304 DPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPM--IIARGTPGFSGADL 361 Query: 533 ANIVNEAALLAA 568 AN+VNEAAL AA Sbjct: 362 ANLVNEAALFAA 373
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 242 bits (618), Expect = 5e-64 Identities = 124/192 (64%), Positives = 150/192 (78%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I RGVLL GPPGTGKTLLAKA+AGEAG+PFFS+S SEFVEMFVG GA+RVRDLFK+AKE Sbjct: 243 IPRGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKEN 302 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP ++FIDE+DAVG RG + NDER+QTLNQLLTEMDGF+ + +IV+AATNRP L Sbjct: 303 APCLVFIDEIDAVGRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVL 362 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R+V V PD++GR ILA+H + L E+ ++ +A TPG GADL Sbjct: 363 DLALLRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAA--IARRTPGFTGADL 420 Query: 533 ANIVNEAALLAA 568 AN++NEAA+ A Sbjct: 421 ANVLNEAAIFTA 432
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 242 bits (617), Expect = 6e-64 Identities = 126/192 (65%), Positives = 151/192 (78%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVLL GPPGTGKTLLAKA+AGEAG+PFFS+S SEFVEMFVG GA+RVRDLFK+AKE Sbjct: 205 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKEN 264 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 +P I+FIDE+DAVG RG NDER+QTLNQLLTEMDGF+ + +I++AATNR L Sbjct: 265 SPCIVFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRVDVL 324 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D+AL RPGRF R+V V VPD++GR +IL VH R L D I +L+A TPG GADL Sbjct: 325 DAALLRPGRFDRQVTVDVPDVKGRLEILNVHARNKKL--DLSISLELIAKRTPGFSGADL 382 Query: 533 ANIVNEAALLAA 568 AN++NEAA+L A Sbjct: 383 ANLLNEAAILTA 394
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 240 bits (613), Expect = 2e-63 Identities = 126/192 (65%), Positives = 149/192 (77%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVLL GPPGTGKTLLAKA+AGEAG+PFFS+S SEFVEMFVG GA+RVRDLFK+AK+ Sbjct: 205 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDN 264 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP I+FIDE+DAVG RG NDER+QTLNQLLTEMDGF+ + VIV+AATNR L Sbjct: 265 APCIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADIL 324 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 DSAL RPGRF R+V V VPD GR IL VH + +E S++ + +A TPG GADL Sbjct: 325 DSALLRPGRFDRQVSVDVPDFRGRLAILEVHAKNKKME--SKVSLETIARRTPGFSGADL 382 Query: 533 ANIVNEAALLAA 568 AN++NEAA+L A Sbjct: 383 ANLLNEAAILTA 394
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 239 bits (611), Expect = 3e-63 Identities = 119/192 (61%), Positives = 153/192 (79%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +G+L+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F+ ++++ Sbjct: 184 IPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKS 243 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP IIFIDE+DAVG RG +DER+QTLNQ+L EMDGFD + +I++AATNRP L Sbjct: 244 APCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVL 303 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R+V V +PD+ GR +IL VH+RKVPL +D + + ++A TPG GADL Sbjct: 304 DPALLRPGRFDRQVIVALPDIRGREQILKVHMRKVPLSKDVDPM--IIARGTPGFSGADL 361 Query: 533 ANIVNEAALLAA 568 AN+VNEAAL AA Sbjct: 362 ANLVNEAALFAA 373
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 238 bits (608), Expect = 7e-63 Identities = 128/193 (66%), Positives = 147/193 (76%), Gaps = 4/193 (2%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I GVLL GPPGTGKTLLAKAVAGEAG+PF+S+S S+FVEMFVG GA+RVRDLF+ AK+ Sbjct: 225 IPAGVLLEGPPGTGKTLLAKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFENAKKT 284 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSD-VKVIVMAATNRPKA 349 APSIIFIDE+DAVG RG NDER+QTLNQLL EMDGF D VIV+AATNR Sbjct: 285 APSIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFQDDGNSVIVIAATNRSDV 344 Query: 350 LDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGAD 529 LD AL RPGRF RKV VG PD++GR +L VH + PL D ++ VA TPG VGAD Sbjct: 345 LDPALLRPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDL--HNVATQTPGYVGAD 402 Query: 530 LANIVNEAALLAA 568 L N++NEAAL+AA Sbjct: 403 LENVLNEAALVAA 415
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 238 bits (608), Expect = 7e-63 Identities = 128/194 (65%), Positives = 149/194 (76%), Gaps = 5/194 (2%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVLL GPPGTGKTLLAKA AGEAG+PFF +S SEFVE+FVG GAARVRDLF++AK+ Sbjct: 206 IPKGVLLVGPPGTGKTLLAKAAAGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQ 265 Query: 182 APSIIFIDELDAVGGSRGRSF----NDERDQTLNQLLTEMDGFD-SDVKVIVMAATNRPK 346 AP I+FIDELDA+G SR NDER+QTLNQLLTEMDGF + VIV+AATNRP+ Sbjct: 266 APCIVFIDELDAIGKSRASGAFMGGNDEREQTLNQLLTEMDGFSAAGATVIVLAATNRPE 325 Query: 347 ALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGA 526 LD AL RPGRF R+V V PDL GR KIL ++ +K+ L D E+ +A TPG GA Sbjct: 326 TLDPALLRPGRFDRQVLVDRPDLAGRLKILEIYAKKIKL--DKEVELKNIATRTPGFAGA 383 Query: 527 DLANIVNEAALLAA 568 DLAN+VNEAALLAA Sbjct: 384 DLANLVNEAALLAA 397
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 238 bits (607), Expect = 9e-63 Identities = 123/190 (64%), Positives = 148/190 (77%), Gaps = 3/190 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVLL GPPGTGKTLLAKA+AGEA PFFS+S SEFVEMFVG GA+RVRDLFK+AKE Sbjct: 203 IPKGVLLVGPPGTGKTLLAKAIAGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEK 262 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP I+FIDE+DAVG RG NDER+QTLNQLLTEMDGF D VIV+AATNR L Sbjct: 263 APCIVFIDEIDAVGRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDTGVIVVAATNRIDVL 322 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 DSAL RPGRF R++ V +P++ GR IL VH +K + +D ++ +++A TPG GADL Sbjct: 323 DSALLRPGRFDRQIMVSLPNINGRLAILKVHSKKKKIHKD--VLLEVIARRTPGFSGADL 380 Query: 533 ANIVNEAALL 562 AN++NEAA+L Sbjct: 381 ANLLNEAAIL 390
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 238 bits (606), Expect = 1e-62 Identities = 117/192 (60%), Positives = 152/192 (79%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +G+L+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F+ +++ Sbjct: 184 IPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKV 243 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP IIFIDE+DAVG RG +DER+QTLNQ+L EMDGFD + +I++AATNRP L Sbjct: 244 APCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVL 303 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R++FV +PD+ GR KI+ VH++KVPL + + + ++A TPG GADL Sbjct: 304 DPALLRPGRFDRQIFVALPDIRGREKIIQVHMKKVPLGNNVDPM--IIARGTPGFSGADL 361 Query: 533 ANIVNEAALLAA 568 AN+VNEAAL AA Sbjct: 362 ANLVNEAALFAA 373
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 235 bits (600), Expect = 6e-62 Identities = 126/192 (65%), Positives = 147/192 (76%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +G LL GPPGTGKTLLA+AVAGEAG+PFFS +ASEFVE+FVG GA+RVRDLF++AK Sbjct: 294 IPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSK 353 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP I+FIDE+DAVG RG NDER+QT+NQLLTEMDGF + VIV+AATNRP L Sbjct: 354 APCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVL 413 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 DSAL RPGRF R+V V PD+ GR KIL VH R L +D + D VA TPG GADL Sbjct: 414 DSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDF--DKVARRTPGFTGADL 471 Query: 533 ANIVNEAALLAA 568 N++NEAA+LAA Sbjct: 472 QNLMNEAAILAA 483
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 234 bits (598), Expect = 1e-61 Identities = 119/192 (61%), Positives = 152/192 (79%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +G+L+ GPPGTGKTLLA+A+AGEA +PFF++S S+FVEMFVG GA+RVRD+F++AK+ Sbjct: 183 IPKGILMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKN 242 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP +IFIDE+DAVG RG +DER+QTLNQ+L EMDGF + VIV+AATNRP L Sbjct: 243 APCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVL 302 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R+V VG+PD++GR +IL VH+RKV + +D + + +A TPG GADL Sbjct: 303 DPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAM--TLARGTPGYSGADL 360 Query: 533 ANIVNEAALLAA 568 AN+VNEAAL AA Sbjct: 361 ANLVNEAALFAA 372
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 234 bits (597), Expect = 1e-61 Identities = 124/190 (65%), Positives = 146/190 (76%), Gaps = 2/190 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I RGVLL GPPGTGKTLLA+AVAGEA +PFF +S S+F+EMFVG GA+RVRDLFK+A+E Sbjct: 173 IPRGVLLVGPPGTGKTLLARAVAGEASVPFFRISGSDFIEMFVGIGASRVRDLFKQAREK 232 Query: 182 APSIIFIDELDAVGGSRGRSF--NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 AP IIFIDELDA+G SR + NDER+QTLNQLL EMDGFD+ +I++AATNRP LD Sbjct: 233 APGIIFIDELDAIGKSRLNAIHSNDEREQTLNQLLVEMDGFDNTTGLILLAATNRPDVLD 292 Query: 356 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 AL RPGRF R+V V PDL+GR IL +H + V L E+ VA +T G GADLA Sbjct: 293 PALLRPGRFDRQVCVDRPDLKGREAILRIHAQNVKLA--PEVDLKAVARITGGYSGADLA 350 Query: 536 NIVNEAALLA 565 N+VNEAALLA Sbjct: 351 NVVNEAALLA 360
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 233 bits (595), Expect = 2e-61 Identities = 124/192 (64%), Positives = 147/192 (76%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +G LL GPPGTGKTLLA+AVAGEAG+PFFS +ASEFVE+FVG GA+RVRDLF++AK Sbjct: 285 IPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSK 344 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP I+FIDE+DAVG RG NDER+QT+NQLLTEMDGF + VIV+AATNRP L Sbjct: 345 APCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVL 404 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 DSAL RPGRF R+V V PD+ GR KIL VH R L +D + + +A TPG GADL Sbjct: 405 DSALLRPGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDF--EKIARRTPGYTGADL 462 Query: 533 ANIVNEAALLAA 568 N++NEAA+LAA Sbjct: 463 QNLMNEAAILAA 474
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 233 bits (593), Expect = 4e-61 Identities = 117/192 (60%), Positives = 150/192 (78%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +G LL GPPGTGKTLLAKA+AGEA +PFFS+S S+FVEMFVG GA+RVRD+F++ K Sbjct: 187 IPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRN 246 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP IIFIDE+DAVG RG NDER+QTLNQ+L EMDGF+++ V+++AATNRP L Sbjct: 247 APCIIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVL 306 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R++ V PD+ GR +IL VHL+K+ + +S ++ ++A TPG GA+L Sbjct: 307 DRALLRPGRFDRQIAVANPDINGREQILKVHLKKI--KYNSTVLARIIARGTPGFSGAEL 364 Query: 533 ANIVNEAALLAA 568 AN+VNEAAL+AA Sbjct: 365 ANLVNEAALIAA 376
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 233 bits (593), Expect = 4e-61 Identities = 117/192 (60%), Positives = 150/192 (78%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +G LL GPPGTGKTLLAKA+AGEA +PFFS+S S+FVEMFVG GA+RVRD+F++ K Sbjct: 187 IPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRN 246 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP IIFIDE+DAVG RG NDER+QTLNQ+L EMDGF+++ V+++AATNRP L Sbjct: 247 APCIIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVL 306 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R++ V PD+ GR +IL VHL+K+ + +S ++ ++A TPG GA+L Sbjct: 307 DRALLRPGRFDRQIAVANPDINGREQILKVHLKKI--KYNSTVLARIIARGTPGFSGAEL 364 Query: 533 ANIVNEAALLAA 568 AN+VNEAAL+AA Sbjct: 365 ANLVNEAALIAA 376
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 232 bits (592), Expect = 5e-61 Identities = 126/193 (65%), Positives = 148/193 (76%), Gaps = 5/193 (2%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVLL GPPGTGKTLLAKAVAGEA +PFFS+ S F+EMFVG GA+RVRDLF AK+ Sbjct: 208 IPKGVLLVGPPGTGKTLLAKAVAGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKE 267 Query: 182 APSIIFIDELDAVGGSRGR----SFNDERDQTLNQLLTEMDGFDSD-VKVIVMAATNRPK 346 APSIIFIDE+DA+G SR S NDER+QTLNQLL EMDGF S+ VIV+AATNRP+ Sbjct: 268 APSIIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPE 327 Query: 347 ALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGA 526 LD AL RPGRF R+V V PD +GR +IL VH++ V L D ++ +A +T GL GA Sbjct: 328 ILDPALLRPGRFDRQVLVDKPDFKGRVEILKVHIKPVKLANDVDL--QEIAKLTAGLAGA 385 Query: 527 DLANIVNEAALLA 565 DLANI+NEAALLA Sbjct: 386 DLANIINEAALLA 398
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 232 bits (592), Expect = 5e-61 Identities = 124/192 (64%), Positives = 145/192 (75%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +G LL GPPGTGKTLLA+AVAGEAG PFFS +ASEFVE+FVG GA+RVRDLF++AK Sbjct: 285 IPKGCLLVGPPGTGKTLLARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSK 344 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP I+FIDE+DAVG RG NDER+QT+NQLLTEMDGF + VIV+AATNRP L Sbjct: 345 APCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVL 404 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 DSAL RPGRF R+V V PD+ GR KIL VH R L +D + D +A TPG G DL Sbjct: 405 DSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDF--DKIARRTPGFTGVDL 462 Query: 533 ANIVNEAALLAA 568 N++NEAA+LAA Sbjct: 463 QNLMNEAAILAA 474
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 232 bits (592), Expect = 5e-61 Identities = 124/191 (64%), Positives = 145/191 (75%), Gaps = 3/191 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +G+LL GPPGTGKTLLAKA+A EA +PFFSV+ SEFVEMF+G GAARVRDLFK+A E Sbjct: 218 IPKGILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASEN 277 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP I+FIDE+DAVG RG NDER+QTLNQLLTEMDGF + VIV+ ATNR L Sbjct: 278 APCIVFIDEIDAVGRERGAGVGGGNDEREQTLNQLLTEMDGFKENKGVIVVGATNRADIL 337 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D+AL RPGRF R+V V +PD GR IL VH R PL ED ++ +AN TPG GADL Sbjct: 338 DAALLRPGRFDRQVTVNLPDRLGRVGILKVHARNKPLGEDVSLV--QLANRTPGFSGADL 395 Query: 533 ANIVNEAALLA 565 AN++NEAA+LA Sbjct: 396 ANLLNEAAILA 406
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 232 bits (591), Expect = 6e-61 Identities = 127/193 (65%), Positives = 147/193 (76%), Gaps = 5/193 (2%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVLL GPPGTGKTLLAKAVAGEA +PFFS+ S F+EMFVG GA+RVRDLF+ AK+ Sbjct: 202 IPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQ 261 Query: 182 APSIIFIDELDAVGGSRGR----SFNDERDQTLNQLLTEMDGFDSD-VKVIVMAATNRPK 346 APSIIFIDE+DA+G SR S NDER+QTLNQLL EMDGF S+ VIV+AATNRP+ Sbjct: 262 APSIIFIDEIDAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPE 321 Query: 347 ALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGA 526 LD AL RPGRF R+V V PD GR +IL VH++ V L D + VA +T GL GA Sbjct: 322 ILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNL--QEVAKLTAGLAGA 379 Query: 527 DLANIVNEAALLA 565 DLANI+NEAALLA Sbjct: 380 DLANIINEAALLA 392
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 232 bits (591), Expect = 6e-61 Identities = 127/193 (65%), Positives = 147/193 (76%), Gaps = 5/193 (2%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVLL GPPGTGKTLLAKAVAGEA +PFFS+ S F+EMFVG GA+RVRDLF+ AK+ Sbjct: 202 IPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQ 261 Query: 182 APSIIFIDELDAVGGSRGR----SFNDERDQTLNQLLTEMDGFDSD-VKVIVMAATNRPK 346 APSIIFIDE+DA+G SR S NDER+QTLNQLL EMDGF S+ VIV+AATNRP+ Sbjct: 262 APSIIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPE 321 Query: 347 ALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGA 526 LD AL RPGRF R+V V PD GR +IL VH++ V L D + VA +T GL GA Sbjct: 322 ILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNL--QEVAKLTAGLAGA 379 Query: 527 DLANIVNEAALLA 565 DLANI+NEAALLA Sbjct: 380 DLANIINEAALLA 392
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 231 bits (589), Expect = 1e-60 Identities = 123/192 (64%), Positives = 147/192 (76%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +G LL GPPGTGKTLLA+AVAGEAG+PFFS +ASEFVE+FVG GA+RVRDLF++AK Sbjct: 282 IPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSK 341 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP I+FIDE+DAVG RG NDER+QT+NQLLTEMDGF + VIV+AATNRP L Sbjct: 342 APCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVL 401 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 DSAL RPGRF R+V V PD+ GR +IL VH R + +D + + VA TPG GADL Sbjct: 402 DSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDY--EKVARRTPGFTGADL 459 Query: 533 ANIVNEAALLAA 568 N++NEAA+LAA Sbjct: 460 QNLMNEAAILAA 471
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 230 bits (587), Expect = 2e-60 Identities = 120/192 (62%), Positives = 148/192 (77%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVLL GPPGTGKTLLA+AVAGEAG+PFF++S S+FVEMFVG GA+RVRDLF +AK+ Sbjct: 195 IPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQN 254 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 +P IIF+DE+DAVG RG +DER+QTLNQLL EMDGF VI++AATNRP L Sbjct: 255 SPCIIFVDEIDAVGRQRGTGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDIL 314 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R++ V PDL GRR +L VH + P+ +D+++ D +A T G+ GADL Sbjct: 315 DPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPIADDADL--DGLAKRTVGMTGADL 372 Query: 533 ANIVNEAALLAA 568 AN+VNEAALL A Sbjct: 373 ANVVNEAALLTA 384
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 230 bits (586), Expect = 2e-60 Identities = 119/192 (61%), Positives = 146/192 (76%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVLL GPPGTGKTLLA+AVAGEAG+PFFS+S S+FVEMFVG GA+RVRDLF+ AK+ Sbjct: 198 IPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKN 257 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP IIFIDE+DAVG RG +DER+QTLNQLL EMDGF ++ +I++AATNR L Sbjct: 258 APCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADIL 317 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R++ V PD+ GR ++L VH R PL +D + +A TPG GADL Sbjct: 318 DPALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNL--KTIATRTPGFSGADL 375 Query: 533 ANIVNEAALLAA 568 N++NEAAL+AA Sbjct: 376 ENLLNEAALVAA 387
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 230 bits (586), Expect = 2e-60 Identities = 122/192 (63%), Positives = 145/192 (75%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +G LL GPPGTGKTLLA+AVAGEAG+PFFS +ASEFVE+FVG GA+RVR LF+ AK Sbjct: 262 IPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKSK 321 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP I+FIDE+DAVG RG NDER+QT+NQLLTEMDGF + VIV+AATNRP L Sbjct: 322 APCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVL 381 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 DSAL RPG+F R+V V PD+ GR +IL VH R L +D + D +A TPG GADL Sbjct: 382 DSALLRPGKFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDF--DKIARRTPGFTGADL 439 Query: 533 ANIVNEAALLAA 568 N++NEAA+LAA Sbjct: 440 QNLMNEAAILAA 451
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 229 bits (585), Expect = 3e-60 Identities = 119/192 (61%), Positives = 148/192 (77%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVLL GPPGTGKTLLA+AVAGEAG+PFF++S S+FVEMFVG GA+RVRDLF++AK+ Sbjct: 195 IPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQN 254 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 +P IIF+DE+DAVG RG +DER+QTLNQLL EMDGF VI++AATNRP L Sbjct: 255 SPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDIL 314 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R++ V PDL GRR +L VH + P+ D+++ D +A T G+ GADL Sbjct: 315 DPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADL--DGLAKRTVGMTGADL 372 Query: 533 ANIVNEAALLAA 568 AN++NEAALL A Sbjct: 373 ANVINEAALLTA 384
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 229 bits (585), Expect = 3e-60 Identities = 119/192 (61%), Positives = 148/192 (77%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVLL GPPGTGKTLLA+AVAGEAG+PFF++S S+FVEMFVG GA+RVRDLF++AK+ Sbjct: 195 IPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQN 254 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 +P IIF+DE+DAVG RG +DER+QTLNQLL EMDGF VI++AATNRP L Sbjct: 255 SPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDIL 314 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R++ V PDL GRR +L VH + P+ D+++ D +A T G+ GADL Sbjct: 315 DPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADL--DGLAKRTVGMTGADL 372 Query: 533 ANIVNEAALLAA 568 AN++NEAALL A Sbjct: 373 ANVINEAALLTA 384
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 229 bits (584), Expect = 4e-60 Identities = 119/191 (62%), Positives = 146/191 (76%), Gaps = 3/191 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVLL GPPGTGKTLLAKA+AGEA +PFFS+S SEFVEMFVG GA+RVRDLFK+AK+ Sbjct: 186 IPKGVLLVGPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQN 245 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP ++FIDE+DAVG RG NDER+QTLNQLLTEMDGF+ + VIV+AATNR L Sbjct: 246 APCLVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRVDVL 305 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D+AL RPGRF R++ V +PD++ R IL VH + L ++ + VA T G GADL Sbjct: 306 DAALLRPGRFDRQIMVSMPDVKSRIAILKVHANQKKLH--PQVSLEAVARRTAGFAGADL 363 Query: 533 ANIVNEAALLA 565 AN++NEAA+LA Sbjct: 364 ANLLNEAAILA 374
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 228 bits (580), Expect = 1e-59 Identities = 121/191 (63%), Positives = 145/191 (75%), Gaps = 4/191 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL G PG GKTLLAKA+AGEA +PF SVS S+FVEMFVG GAARVRDLF+ AK+ AP Sbjct: 189 KGVLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAP 248 Query: 188 SIIFIDELDAVGGSRGR----SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 IIFIDE+DAVG +RG +DER+QTLNQLL EMDGFD+ +IV+AATNRP LD Sbjct: 249 CIIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILD 308 Query: 356 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 AL RPGRF R++F+ PD+ GR +IL VH R L +D ++ + VA TPG GADL Sbjct: 309 PALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDL--EFVARATPGFTGADLE 366 Query: 536 NIVNEAALLAA 568 N++NEAALLAA Sbjct: 367 NLLNEAALLAA 377
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 226 bits (576), Expect = 4e-59 Identities = 117/193 (60%), Positives = 144/193 (74%), Gaps = 4/193 (2%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I RG +L+GPPGTGKTLLAKA AGEAG+PF+ VS SEFVEMFVG GAARVRDLFK A+E Sbjct: 380 IPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTAREN 439 Query: 182 APSIIFIDELDAVGGSRGR----SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKA 349 APSI+FIDE+DA+G +R + NDER+ TLNQ+L EMDGF V+V+A TNRP Sbjct: 440 APSIVFIDEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDI 499 Query: 350 LDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGAD 529 LD AL RPGRF R + + P+LEGR+ I AVHL + L + + + +A +TPG GAD Sbjct: 500 LDKALLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGAD 559 Query: 530 LANIVNEAALLAA 568 +AN+ NEAAL+AA Sbjct: 560 IANVCNEAALIAA 572
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 225 bits (574), Expect = 6e-59 Identities = 116/198 (58%), Positives = 146/198 (73%), Gaps = 9/198 (4%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I RG +L+GPPGTGKTLLAKA AGEA +PF SVS SEFVEMFVG GA+RVRDLF +A+ Sbjct: 320 IPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSM 379 Query: 182 APSIIFIDELDAVGGSRGR-----SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPK 346 APSIIFIDE+DA+G RG+ NDER+ TLNQLL EMDGF + +V+V+A TNRP Sbjct: 380 APSIIFIDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPD 439 Query: 347 ALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLE----EDSEIICDLVANVTPG 514 LD+AL RPGRF R + + PD+ GR++I VHL+++ L+ +D + +A +TPG Sbjct: 440 VLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPG 499 Query: 515 LVGADLANIVNEAALLAA 568 GAD+AN NEAAL+AA Sbjct: 500 FTGADIANACNEAALIAA 517
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 224 bits (572), Expect = 1e-58 Identities = 118/192 (61%), Positives = 144/192 (75%), Gaps = 3/192 (1%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +GVLL GPPGTGKTLLAKA AGEAG+PFFS+S S+FVEMFVG GA+RVRDLF+ AK+ Sbjct: 193 IPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKN 252 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP +IFIDE+DAVG RG +DER+QTLNQLL EMDGF ++ +I++AATNR L Sbjct: 253 APCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADIL 312 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R++ V PD+ GR +L VH R PL+E + +A TPG GADL Sbjct: 313 DPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNL--KSIAMRTPGFSGADL 370 Query: 533 ANIVNEAALLAA 568 N++NEAAL+AA Sbjct: 371 ENLLNEAALVAA 382
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 219 bits (559), Expect = 3e-57 Identities = 111/194 (57%), Positives = 143/194 (73%), Gaps = 5/194 (2%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +G +L GPPGTGKTLLAKA AGEA +PF +VS SEF+EMFVG G ARVRDLF A++ Sbjct: 340 IPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKN 399 Query: 182 APSIIFIDELDAVGGSRGR---SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP I+FIDE+DAVG RGR E++ TLNQLL EMDGF++ V+++A TNRP L Sbjct: 400 APCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDIL 459 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIICDLVANVTPGLVGA 526 D AL RPGRF R++F+G PD++GR I VHLR + L+ + + + +A++TPG GA Sbjct: 460 DPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGA 519 Query: 527 DLANIVNEAALLAA 568 D+AN+ NEAAL+AA Sbjct: 520 DVANVCNEAALIAA 533
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 219 bits (559), Expect = 3e-57 Identities = 111/194 (57%), Positives = 143/194 (73%), Gaps = 5/194 (2%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +G +L GPPGTGKTLLAKA AGEA +PF +VS SEF+EMFVG G ARVRDLF A++ Sbjct: 339 IPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKN 398 Query: 182 APSIIFIDELDAVGGSRGR---SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP I+FIDE+DAVG RGR E++ TLNQLL EMDGF++ V+++A TNRP L Sbjct: 399 APCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDIL 458 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIICDLVANVTPGLVGA 526 D AL RPGRF R++F+G PD++GR I VHLR + L+ + + + +A++TPG GA Sbjct: 459 DPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGA 518 Query: 527 DLANIVNEAALLAA 568 D+AN+ NEAAL+AA Sbjct: 519 DVANVCNEAALIAA 532
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 216 bits (551), Expect = 3e-56 Identities = 110/196 (56%), Positives = 142/196 (72%), Gaps = 7/196 (3%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +G +L GPPGTGKTLLAKA AGEA +PF +V+ SEF+EMFVG G ARVRD+F A++ Sbjct: 206 IPKGAMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKH 265 Query: 182 APSIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 AP I+FIDE+DA+G RGR E++ TLNQ+L EMDGF+S V+V+A TNRP L Sbjct: 266 APCILFIDEIDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDIL 325 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL----VANVTPGLV 520 D AL RPGRF R++++G PD++GR I VHLR PL+ D + D +A +TPG Sbjct: 326 DPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLR--PLKLDGSLSKDALSRKLAALTPGFT 383 Query: 521 GADLANIVNEAALLAA 568 GAD++N+ NEAAL+AA Sbjct: 384 GADISNVCNEAALIAA 399
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 215 bits (547), Expect = 8e-56 Identities = 110/189 (58%), Positives = 141/189 (74%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G+LL GPPGTGKTLLAKA AGEA +PFF +SAS FVE++VG GA RVR++FKEA++ AP Sbjct: 246 KGILLGGPPGTGKTLLAKATAGEANVPFFFISASSFVELYVGLGAKRVREMFKEARKLAP 305 Query: 188 SIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IIFIDELDAVG SRG NDER+QTLNQ+L EMDG + + +++M ATNR LD Sbjct: 306 AIIFIDELDAVGRSRGSGIGGGNDEREQTLNQILVEMDGINENAGILIMGATNRTDVLDP 365 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGRF R + VG+PD++ R +IL +H + L + EI D +A TPG GA L N Sbjct: 366 ALLRPGRFDRIITVGLPDIKEREEILKLHSKGKRLSK--EIKFDKIAKRTPGYSGAQLEN 423 Query: 539 IVNEAALLA 565 ++NEA+LL+ Sbjct: 424 VINEASLLS 432
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 203 bits (516), Expect = 3e-52 Identities = 104/188 (55%), Positives = 136/188 (72%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 + +GVLL GPPGTGKTLLA+A AGEAG+ FF +S SEF E++VG GA R+RDLF +A+ Sbjct: 313 LPKGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSR 372 Query: 182 APSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 361 AP+IIFIDELDA+GG R QTLNQLL E+DGF +I++ ATN P+ALD A Sbjct: 373 APAIIFIDELDAIGGKRNPKDQAYAKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKA 432 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 L RPGRF + V V +PD+ GR IL H++K+ L ++ + ++A TPGL GA+LAN+ Sbjct: 433 LTRPGRFDKVVNVDLPDVRGRADILKHHMKKITLADN--VDPTIIARGTPGLSGAELANL 490 Query: 542 VNEAALLA 565 VN+AA+ A Sbjct: 491 VNQAAVYA 498
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 202 bits (513), Expect = 7e-52 Identities = 113/189 (59%), Positives = 132/189 (69%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RGV+L GPPGTGKTLLAKAVAGEAG+PFF + S F +M VG GA RVRDLF +AK+AAP Sbjct: 262 RGVILYGPPGTGKTLLAKAVAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAP 321 Query: 188 SIIFIDELDAVGGSRGR---SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 IIFIDE+D+VG RGR S +QTLNQLL EMDGF S V+VMAATNR LD Sbjct: 322 CIIFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDD 381 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGRF R + + +PD++ R IL VH + L S+I VA TPG GA L N Sbjct: 382 ALLRPGRFDRHIQINLPDIKEREGILQVHAKNKNL--SSKISLLDVAKRTPGFSGAQLEN 439 Query: 539 IVNEAALLA 565 ++NEA LLA Sbjct: 440 VINEATLLA 448
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 201 bits (511), Expect = 1e-51 Identities = 113/189 (59%), Positives = 131/189 (69%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RGV+L GPPGTGKTLLAKAVAGEAG+PFF + S F +M VG GA RVRDLF +AK+AAP Sbjct: 265 RGVILYGPPGTGKTLLAKAVAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAP 324 Query: 188 SIIFIDELDAVGGSRGR---SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 IIFIDE+D+VG RGR S +QTLNQLL EMDGF S V+VMAATNR LD Sbjct: 325 CIIFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDD 384 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGRF R + + +PD++ R IL VH L S+I VA TPG GA L N Sbjct: 385 ALLRPGRFDRHIQINLPDIKEREGILKVHAENKNL--SSKISLLDVAKRTPGFSGAQLEN 442 Query: 539 IVNEAALLA 565 ++NEA LLA Sbjct: 443 VINEATLLA 451
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 198 bits (503), Expect = 1e-50 Identities = 106/190 (55%), Positives = 138/190 (72%), Gaps = 1/190 (0%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 + +G+LL GPPGTGKTLLA+AVAGEA +PF+ S SEF EMFVG GA+R+R+LF+EAK Sbjct: 313 LPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKAN 372 Query: 182 APSIIFIDELDAVGGSRGRS-FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 AP +IFIDELD+VGG R S + QT+NQLL EMDGF + VI++ ATN P+ALD+ Sbjct: 373 APCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDN 432 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGRF +V V PD++GR +IL +L K+ D + +++A T G GA+L N Sbjct: 433 ALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKF--DKSVDPEIIARGTVGFSGAELEN 490 Query: 539 IVNEAALLAA 568 +VN+AAL AA Sbjct: 491 LVNQAALKAA 500
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 198 bits (503), Expect = 1e-50 Identities = 106/190 (55%), Positives = 138/190 (72%), Gaps = 1/190 (0%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 + +G+LL GPPGTGKTLLA+AVAGEA +PF+ S SEF EMFVG GA+R+R+LF+EAK Sbjct: 371 LPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKAN 430 Query: 182 APSIIFIDELDAVGGSRGRS-FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 AP +IFIDELD+VGG R S + QT+NQLL EMDGF + VI++ ATN P+ALD+ Sbjct: 431 APCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDN 490 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGRF +V V PD++GR +IL +L K+ D + +++A T G GA+L N Sbjct: 491 ALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKF--DQSVDPEIIARGTVGFSGAELEN 548 Query: 539 IVNEAALLAA 568 +VN+AAL AA Sbjct: 549 LVNQAALKAA 558
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 197 bits (501), Expect = 2e-50 Identities = 105/193 (54%), Positives = 131/193 (67%), Gaps = 4/193 (2%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 + +G LL GPPG GKTLLAKAVA EA +PF +++ EFVE+ G GAARVR LFKEA+ Sbjct: 341 VPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARAR 400 Query: 182 APSIIFIDELDAVGGSRGRSF----NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKA 349 AP I++IDE+DAVG R + N E +QTLNQLL EMDG + VIV+A+TNR Sbjct: 401 APCIVYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADI 460 Query: 350 LDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGAD 529 LD AL RPGR R VF+ +P L+ RR+I HL+ + L + S +A +TPG GAD Sbjct: 461 LDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGAD 520 Query: 530 LANIVNEAALLAA 568 +ANI NEAAL AA Sbjct: 521 IANICNEAALHAA 533
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 192 bits (489), Expect = 4e-49 Identities = 104/190 (54%), Positives = 136/190 (71%), Gaps = 1/190 (0%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 + +G+LL GPPGTGKTLLA+AVAGEA +PF+ S SEF EMFVG GA+R+R+LF+EAK Sbjct: 313 LPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKAN 372 Query: 182 APSIIFIDELDAVGGSRGR-SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 AP +IFIDELD+VGG R + QT+ QLL EMDGF + VI++ ATN P+ALD+ Sbjct: 373 APCVIFIDELDSVGGKRIEFPMHPYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDN 432 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGRF +V V PD++GR +IL +L K+ D + +++A T G GA+L N Sbjct: 433 ALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKF--DKSVDPEIIARGTVGFSGAELEN 490 Query: 539 IVNEAALLAA 568 +VN+AAL AA Sbjct: 491 LVNQAALKAA 500
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 189 bits (481), Expect = 4e-48 Identities = 98/186 (52%), Positives = 130/186 (69%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLAKAVA EAG F+ ++ E + +VG +R +F+EA+E AP Sbjct: 214 KGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAP 273 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 SIIFIDE+DA+ R + + + + QLLT MDG +V+V+ ATNRP ALD AL Sbjct: 274 SIIFIDEIDAIAPKRDEATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALR 333 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 RPGRF R++ +GVPD EGR++IL +H R +PL ED ++ D +A+VT G VGADLA + Sbjct: 334 RPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDL--DYLADVTHGFVGADLAALCK 391 Query: 548 EAALLA 565 EAA+ A Sbjct: 392 EAAMRA 397 Score = 169 bits (428), Expect = 5e-42 Identities = 89/187 (47%), Positives = 120/187 (64%), Gaps = 1/187 (0%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLAKAVA E+G F SV E +VG +R++F++A+++AP Sbjct: 487 KGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAP 546 Query: 188 SIIFIDELDAVGGSRGRSFNDE-RDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 364 IIF DE+DA+ RGR + D+ +NQLLTE+DG + V+V+AATNRP +D AL Sbjct: 547 CIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPAL 606 Query: 365 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 544 RPGR R + V VPD + R I +H R + L ED + + +A T G GAD+ + Sbjct: 607 LRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNL--EELAKKTEGYTGADIEALC 664 Query: 545 NEAALLA 565 EAA+LA Sbjct: 665 REAAMLA 671
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 185 bits (469), Expect = 9e-47 Identities = 103/190 (54%), Positives = 130/190 (68%), Gaps = 1/190 (0%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 + +GVLL GPPGTGKTLLA+A+AGEA +PFF + SEF E+ VG+GA RVRDLF +AK Sbjct: 233 LPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKAR 292 Query: 182 APSIIFIDELDAVGGSR-GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 AP IIFIDE+D+VG R S + +QT+NQLL+EMDGF + +IV+AATNR LD Sbjct: 293 APCIIFIDEIDSVGSKRVSNSIHPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDK 352 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGRF +V V PDL GR I +L K+ I ++A + G GAD+ N Sbjct: 353 ALLRPGRFDVRVTVPKPDLAGRVDIFNFYLSKI--VHSGGIDPKVLAKGSTGFTGADIEN 410 Query: 539 IVNEAALLAA 568 +VN+AAL AA Sbjct: 411 MVNQAALKAA 420
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 181 bits (458), Expect = 2e-45 Identities = 97/190 (51%), Positives = 132/190 (69%), Gaps = 1/190 (0%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 + +GVLL GPPG GKTLLAKAV+GEA +PF S S F E+ VG GA+R+R LF AK+ Sbjct: 198 LPKGVLLVGPPGVGKTLLAKAVSGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQN 257 Query: 182 APSIIFIDELDAVGGSRGRS-FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +P ++FIDE+D+VGG+R S + +QT+NQLL EMDGF S +IV+ ATN+ + LD Sbjct: 258 SPCLVFIDEIDSVGGNRTFSPHHPFANQTINQLLAEMDGFQSKEGIIVLGATNQAEVLDK 317 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGRF ++ V P EGR +L ++L+KV + S I + +A+ T G GAD+ N Sbjct: 318 ALLRPGRFDVQIHVSPPTYEGRIALLNLYLKKV--KTGSNIDIEKLAHGTVGYTGADIQN 375 Query: 539 IVNEAALLAA 568 +VN+AA+ AA Sbjct: 376 LVNQAAIAAA 385
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 180 bits (456), Expect = 3e-45 Identities = 94/186 (50%), Positives = 127/186 (68%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTL+AKAVA E F +S E + + G R+R++F+EAKE AP Sbjct: 217 KGVLLYGPPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAP 276 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 SIIFIDE+D++ R + + + QLL MDG ++ VIV+AATNRP A+D AL Sbjct: 277 SIIFIDEIDSIAPKREEVTGEVERRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALR 336 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 RPGRF R++ +GVPD EGR++IL +H RK+PL ED ++ + +A +T G VGADL + Sbjct: 337 RPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDL--EELAELTNGFVGADLEALCK 394 Query: 548 EAALLA 565 EAA+ A Sbjct: 395 EAAMHA 400 Score = 158 bits (399), Expect = 1e-38 Identities = 83/187 (44%), Positives = 119/187 (63%), Gaps = 1/187 (0%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG+LL GPPGTGKTLLAKAVA E+ F SV E + +VG VR++F++A++ AP Sbjct: 490 RGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAP 549 Query: 188 SIIFIDELDAVGGSRGRSFNDE-RDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 364 +IF DE+D++ RG + ++ ++QLLTE+DG + V+V+AATNRP +D AL Sbjct: 550 CVIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPAL 609 Query: 365 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 544 RPGR R +++ PD + R +I +HLR PL +D I + +A T G GAD+ + Sbjct: 610 LRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNI--EELAEKTEGYSGADIEAVC 667 Query: 545 NEAALLA 565 EA +LA Sbjct: 668 REAGMLA 674
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 176 bits (447), Expect = 3e-44 Identities = 99/189 (52%), Positives = 129/189 (68%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKT+LAKAVA E+ F V ASEF + FVG GA VR+LF+ AK AP Sbjct: 169 KGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAP 228 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIFIDE+DA+G R G S E +TL QLL E+DGFD V ++AATNR LD Sbjct: 229 SIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDP 288 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGRF R + V +PD +GR +I ++L+K+ +E++ I +L++ +T G GAD+ N Sbjct: 289 ALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDN--INLELLSQLTEGFSGADIKN 346 Query: 539 IVNEAALLA 565 + EAA +A Sbjct: 347 VCVEAAYMA 355
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 175 bits (444), Expect = 7e-44 Identities = 99/189 (52%), Positives = 126/189 (66%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLAKAVA E F + ASEFV ++G GA VR +F+ AKE +P Sbjct: 186 KGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSP 245 Query: 188 SIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIFIDE+DAV R +S E +TL QLL E+DGF+S V ++AATNRP LD Sbjct: 246 SIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDP 305 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGRF R + V +P+ +GRR+IL +H + L E+ +I +L+A +T G GADL Sbjct: 306 ALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDI--ELLARITDGASGADLKA 363 Query: 539 IVNEAALLA 565 I EA + A Sbjct: 364 ICTEAGMFA 372
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 175 bits (444), Expect = 7e-44 Identities = 98/189 (51%), Positives = 125/189 (66%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G+LL GPPGTGKTLLAKAVA E F V SE V+ F+G GA+ V+D+FK AKE AP Sbjct: 205 KGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAP 264 Query: 188 SIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIFIDE+DA+ R + + E +TL QLL EMDGFD+ V ++ ATNRP LD Sbjct: 265 SIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDP 324 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 A+ RPGRF R + V PD +GR +IL +H RK+ L ED + + +A +T G VGA+L Sbjct: 325 AILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNL--EEIAKMTEGCVGAELKA 382 Query: 539 IVNEAALLA 565 I EA + A Sbjct: 383 ICTEAGMNA 391
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 174 bits (442), Expect = 1e-43 Identities = 91/186 (48%), Positives = 124/186 (66%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G+LL GPPGTGKTLLA+A+A E G F +V+ E + F G R+R++FKEA+E AP Sbjct: 247 KGILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAP 306 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 SIIFIDE+DA+ R + + + QLLT MDG +VIV+ ATNRP A+D AL Sbjct: 307 SIIFIDEIDAIAPKREDVTGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALR 366 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 RPGRF R++ + PD +GR+ IL VH R +P+ +D ++ D +A +T G GADLA + Sbjct: 367 RPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDL--DKLAEMTYGYTGADLAALAK 424 Query: 548 EAALLA 565 EAA+ A Sbjct: 425 EAAIYA 430 Score = 163 bits (413), Expect = 3e-40 Identities = 87/187 (46%), Positives = 122/187 (65%), Gaps = 1/187 (0%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G+LL GPPGTGKT+LAKAVA E+G F +V E + +VG +R++F++A++AAP Sbjct: 522 KGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAP 581 Query: 188 SIIFIDELDAVGGSRGRSFND-ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 364 ++IF DE+D++ RG S + ++ +NQLL EMDG KV+++AATNRP LD AL Sbjct: 582 TVIFFDEIDSIAPIRGLSTDSGVTERIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPAL 641 Query: 365 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 544 RPGRF R ++V PD R +IL VH + VPL ED + + +A G GADL +V Sbjct: 642 LRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAED--VSLEDIAEKAEGYTGADLEALV 699 Query: 545 NEAALLA 565 EA + A Sbjct: 700 REATINA 706
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 174 bits (442), Expect = 1e-43 Identities = 98/189 (51%), Positives = 125/189 (66%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLAKAVA A F ++A E V+ F+G GA VR+LF+ A+E AP Sbjct: 214 KGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAP 273 Query: 188 SIIFIDELDAVGGSRGR---SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIFIDE+DA+G R R S + E +TL QLL EMDGFD + V+AATNR LD Sbjct: 274 SIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDP 333 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGRF R + + +PD EGR +I +H R + L ED ++ +A +T G GAD+ Sbjct: 334 ALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDL--QKLAKITEGASGADIKA 391 Query: 539 IVNEAALLA 565 I EA ++A Sbjct: 392 ICTEAGMMA 400
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 172 bits (436), Expect = 6e-43 Identities = 95/189 (50%), Positives = 127/189 (67%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLAKAVA E+ F V ASEF + FVG GA VR++F+ A+ AP Sbjct: 169 KGVLLYGPPGTGKTLLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAP 228 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SI+FIDE+DA+G R G S E +TL QLL E+DGF V ++AATNR LD Sbjct: 229 SIVFIDEIDAIGAKRVDMGTSGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDP 288 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGRF R + V +P+ EGR++I ++L+K ++ D I D++A++T G GA++ N Sbjct: 289 ALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQK--MKTDGNIRYDILASMTEGFSGAEIKN 346 Query: 539 IVNEAALLA 565 + EA +A Sbjct: 347 VCTEAGYIA 355
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 171 bits (433), Expect = 1e-42 Identities = 91/186 (48%), Positives = 125/186 (67%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG+LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP Sbjct: 239 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 298 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 +IIFIDELDA+ R ++ + + ++QLLT MDG VIVMAATNRP ++D AL Sbjct: 299 AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALR 358 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 R GRF R+V +G+PD GR +IL +H + + L +D ++ + VAN T G VGADLA + + Sbjct: 359 RFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDL--EQVANETHGHVGADLAALCS 416 Query: 548 EAALLA 565 EAAL A Sbjct: 417 EAALQA 422 Score = 160 bits (404), Expect = 3e-39 Identities = 81/190 (42%), Positives = 118/190 (62%), Gaps = 3/190 (1%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 ++GVL GPPG GKTLLAKA+A E F S+ E + M+ G A VR++F +A++AA Sbjct: 511 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 570 Query: 185 PSIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 P ++F DELD++ +RG + D D+ +NQ+LTEMDG V ++ ATNRP +D Sbjct: 571 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIID 630 Query: 356 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 A+ RPGR + +++ +PD + R IL +LRK P+ +D ++ D +A +T G GADL Sbjct: 631 PAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDV--DFLAKMTNGFSGADLT 688 Query: 536 NIVNEAALLA 565 I A LA Sbjct: 689 EICQRACKLA 698
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 171 bits (433), Expect = 1e-42 Identities = 91/186 (48%), Positives = 125/186 (67%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG+LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP Sbjct: 238 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 297 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 +IIFIDELDA+ R ++ + + ++QLLT MDG VIVMAATNRP ++D AL Sbjct: 298 AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALR 357 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 R GRF R+V +G+PD GR +IL +H + + L +D ++ + VAN T G VGADLA + + Sbjct: 358 RFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALCS 415 Query: 548 EAALLA 565 EAAL A Sbjct: 416 EAALQA 421 Score = 158 bits (400), Expect = 9e-39 Identities = 80/190 (42%), Positives = 119/190 (62%), Gaps = 3/190 (1%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 ++GVL GPPG GKTLLAKA+A E F S+ E + M+ G A VR++F +A++AA Sbjct: 510 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 569 Query: 185 PSIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 P ++F DELD++ +RG + D D+ +NQ+LTEMDG + V ++ ATNRP +D Sbjct: 570 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIID 629 Query: 356 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 A+ RPGR + +++ +PD + R IL +LRK P+ +D ++ + +A +T G GADL Sbjct: 630 PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDL--EFLAKMTNGFSGADLT 687 Query: 536 NIVNEAALLA 565 I A LA Sbjct: 688 EICQRACKLA 697
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 171 bits (433), Expect = 1e-42 Identities = 91/186 (48%), Positives = 125/186 (67%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG+LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP Sbjct: 238 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 297 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 +IIFIDELDA+ R ++ + + ++QLLT MDG VIVMAATNRP ++D AL Sbjct: 298 AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALR 357 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 R GRF R+V +G+PD GR +IL +H + + L +D ++ + VAN T G VGADLA + + Sbjct: 358 RFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALCS 415 Query: 548 EAALLA 565 EAAL A Sbjct: 416 EAALQA 421 Score = 158 bits (400), Expect = 9e-39 Identities = 80/190 (42%), Positives = 119/190 (62%), Gaps = 3/190 (1%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 ++GVL GPPG GKTLLAKA+A E F S+ E + M+ G A VR++F +A++AA Sbjct: 510 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 569 Query: 185 PSIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 P ++F DELD++ +RG + D D+ +NQ+LTEMDG + V ++ ATNRP +D Sbjct: 570 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIID 629 Query: 356 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 A+ RPGR + +++ +PD + R IL +LRK P+ +D ++ + +A +T G GADL Sbjct: 630 PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDL--EFLAKMTNGFSGADLT 687 Query: 536 NIVNEAALLA 565 I A LA Sbjct: 688 EICQRACKLA 697
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 171 bits (433), Expect = 1e-42 Identities = 91/186 (48%), Positives = 125/186 (67%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG+LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP Sbjct: 238 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 297 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 +IIFIDELDA+ R ++ + + ++QLLT MDG VIVMAATNRP ++D AL Sbjct: 298 AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALR 357 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 R GRF R+V +G+PD GR +IL +H + + L +D ++ + VAN T G VGADLA + + Sbjct: 358 RFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALCS 415 Query: 548 EAALLA 565 EAAL A Sbjct: 416 EAALQA 421 Score = 158 bits (400), Expect = 9e-39 Identities = 80/190 (42%), Positives = 119/190 (62%), Gaps = 3/190 (1%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 ++GVL GPPG GKTLLAKA+A E F S+ E + M+ G A VR++F +A++AA Sbjct: 510 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 569 Query: 185 PSIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 P ++F DELD++ +RG + D D+ +NQ+LTEMDG + V ++ ATNRP +D Sbjct: 570 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIID 629 Query: 356 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 A+ RPGR + +++ +PD + R IL +LRK P+ +D ++ + +A +T G GADL Sbjct: 630 PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDL--EFLAKMTNGFSGADLT 687 Query: 536 NIVNEAALLA 565 I A LA Sbjct: 688 EICQRACKLA 697
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 171 bits (433), Expect = 1e-42 Identities = 91/186 (48%), Positives = 125/186 (67%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG+LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP Sbjct: 238 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 297 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 +IIFIDELDA+ R ++ + + ++QLLT MDG VIVMAATNRP ++D AL Sbjct: 298 AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALR 357 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 R GRF R+V +G+PD GR +IL +H + + L +D ++ + VAN T G VGADLA + + Sbjct: 358 RFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALCS 415 Query: 548 EAALLA 565 EAAL A Sbjct: 416 EAALQA 421 Score = 158 bits (400), Expect = 9e-39 Identities = 80/190 (42%), Positives = 119/190 (62%), Gaps = 3/190 (1%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 ++GVL GPPG GKTLLAKA+A E F S+ E + M+ G A VR++F +A++AA Sbjct: 510 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 569 Query: 185 PSIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 P ++F DELD++ +RG + D D+ +NQ+LTEMDG + V ++ ATNRP +D Sbjct: 570 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIID 629 Query: 356 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 A+ RPGR + +++ +PD + R IL +LRK P+ +D ++ + +A +T G GADL Sbjct: 630 PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDL--EFLAKMTNGFSGADLT 687 Query: 536 NIVNEAALLA 565 I A LA Sbjct: 688 EICQRACKLA 697
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 170 bits (430), Expect = 3e-42 Identities = 97/189 (51%), Positives = 121/189 (64%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLAKAVA E F V SE V+ F+G GA VRD+FK AKE +P Sbjct: 183 KGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSP 242 Query: 188 SIIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 IIFIDE+DAV R S + E +TL QLL EMDGFDS V ++AATNRP LD Sbjct: 243 CIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDP 302 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 A+ RPGRF R + + +PD +GR +IL +H K+ L+ + VA + +VGADL Sbjct: 303 AILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNLK---GVDLREVAKIAENMVGADLKA 359 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 360 VCTEAGMFA 368
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 170 bits (430), Expect = 3e-42 Identities = 98/189 (51%), Positives = 121/189 (64%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPG GKTL+AKA+A E F V SE V ++G GA V +LF+ AKE AP Sbjct: 172 KGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAP 231 Query: 188 SIIFIDELDAVGGSR-GRSFNDERD--QTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IIFIDE+DA+G R + ER+ +TL QLL EMDGFD V V+AATNRP LD Sbjct: 232 TIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDP 291 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGRF R + V +PD EGR +IL VH R++ L + L+A +T G GADL Sbjct: 292 ALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLR---GVDLRLIAELTEGASGADLKA 348 Query: 539 IVNEAALLA 565 I EA + A Sbjct: 349 IATEAGMFA 357
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 170 bits (430), Expect = 3e-42 Identities = 97/189 (51%), Positives = 122/189 (64%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPG GKTL+AKA+A E F V SE V ++G GA V +LF+ AKE AP Sbjct: 175 KGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAP 234 Query: 188 SIIFIDELDAVGGSR-GRSFNDERD--QTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IIFIDE+DA+G R + ER+ +TL QLL EMDGFD V V+AATNRP LD Sbjct: 235 TIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDP 294 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGRF R + V +PD EGR +IL VH R++ L+ + ++A +T G GADL Sbjct: 295 ALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLK---NVDLRVIAEITEGASGADLKA 351 Query: 539 IVNEAALLA 565 I EA + A Sbjct: 352 IATEAGMFA 360
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 169 bits (429), Expect = 4e-42 Identities = 98/189 (51%), Positives = 121/189 (64%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPG GKTL+AKAVA F V SE V F+G GA V +LF+ AKE AP Sbjct: 173 KGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAP 232 Query: 188 SIIFIDELDAVGGSR-GRSFNDERD--QTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IIFIDE+DA+G R + ER+ +TL QLL EMDGFD V V+AATNRP LD Sbjct: 233 TIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDP 292 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGRF R + V +PD +GR +IL VH RK+ L+ + ++A +T G GADL Sbjct: 293 ALLRPGRFDRLIEVPLPDYQGRLEILKVHTRKMNLK---GVDLRVIAEITEGASGADLKA 349 Query: 539 IVNEAALLA 565 I EA + A Sbjct: 350 IATEAGMFA 358
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 169 bits (429), Expect = 4e-42 Identities = 89/186 (47%), Positives = 125/186 (67%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLAKAVA E FFS++ E + + G ++R++F++AK+ +P Sbjct: 224 QGVLLHGPPGTGKTLLAKAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSP 283 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 SIIFIDELD++ R + + + QLLT MDG + +VIV+AATNR A+D AL Sbjct: 284 SIIFIDELDSIAPKREDVTGEVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALR 343 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 RPGRF R++ +GVPD GR +IL +H R +PL +D + +A+ T G VGAD+ ++ Sbjct: 344 RPGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNL--STLADDTHGFVGADIESLSK 401 Query: 548 EAALLA 565 EAA+ A Sbjct: 402 EAAMRA 407 Score = 163 bits (413), Expect = 3e-40 Identities = 88/186 (47%), Positives = 121/186 (65%), Gaps = 1/186 (0%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 GVLL GPPGTGKTL+AKAVA E F SV + + +VG +R F++A++ AP+ Sbjct: 498 GVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPT 557 Query: 191 IIFIDELDAVGGSRGRS-FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 +IF DELD++ RG++ N+ ++ +NQLLTE+DG + +V+V+AATNRP +D AL Sbjct: 558 VIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALI 617 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 R GRF R V VG P +EGR +IL +H + PL D + +A G VG+DLANI Sbjct: 618 RSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAAD--VSLRELAERADGYVGSDLANIAR 675 Query: 548 EAALLA 565 EAA+ A Sbjct: 676 EAAIEA 681
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 169 bits (428), Expect = 5e-42 Identities = 88/189 (46%), Positives = 126/189 (66%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GV+L GPPGTGKTL+A+AVA E+G F S++ E + + G+ ++R++F +A+E AP Sbjct: 225 KGVILYGPPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAP 284 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 SIIFIDE+D++ R + + + QLLT MDG VIV+ ATNR A+D AL Sbjct: 285 SIIFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALR 344 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPL---EEDSEIICDLVANVTPGLVGADLAN 538 RPGRF R++ +GVPD GR++IL +H R +PL EE+ + +A+ T G VGADLA Sbjct: 345 RPGRFDREIEIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAA 404 Query: 539 IVNEAALLA 565 +V E+A+ A Sbjct: 405 LVRESAMNA 413 Score = 156 bits (394), Expect = 4e-38 Identities = 82/188 (43%), Positives = 120/188 (63%), Gaps = 1/188 (0%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 ++G LL GPPG GKTLLAKAVA E+ F S+ E + +VG +R++FK+AK+ A Sbjct: 501 SKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVA 560 Query: 185 PSIIFIDELDAVGGSRG-RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 361 P+I+F+DE+D++ RG S + ++ +NQLLT +DG + V+V+ ATNRP +D A Sbjct: 561 PAIVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPA 620 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 L R GRF + +++ PD E R IL VH + +PL D ++ + +A T G VGADL N+ Sbjct: 621 LLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDL--NDIAQRTEGYVGADLENL 678 Query: 542 VNEAALLA 565 EA + A Sbjct: 679 CREAGMNA 686
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 168 bits (426), Expect = 9e-42 Identities = 94/185 (50%), Positives = 121/185 (65%), Gaps = 3/185 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLAKAVAGE F V SE V F+G GA VR++F+ A+E AP Sbjct: 174 KGVLLHGPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAP 233 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SI+FIDE+DA+ R G S + E +T+ QLL E+DGFD V V+AATNR +D Sbjct: 234 SILFIDEIDAIASKRVDIGTSGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDP 293 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 A+ RPGRF R + V +P L GR +IL +H RK + D ++ + +A +T G GADL Sbjct: 294 AVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDL--EAIAKLTEGFSGADLKA 351 Query: 539 IVNEA 553 +V EA Sbjct: 352 VVVEA 356
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 167 bits (424), Expect = 1e-41 Identities = 97/189 (51%), Positives = 121/189 (64%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPG GKTL+AKA+A E F V SE V ++G GA V +LF+ AKE AP Sbjct: 175 KGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAP 234 Query: 188 SIIFIDELDAVGGSR-GRSFNDERD--QTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IIFIDE+DA+G R + ER+ +TL QLL EMDGFD V V+AATNRP LD Sbjct: 235 TIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDP 294 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGRF R + V +PD EGR +IL VH R++ L+ + +A +T G GADL Sbjct: 295 ALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLK---GVDLRAIAEMTEGASGADLKA 351 Query: 539 IVNEAALLA 565 I EA + A Sbjct: 352 IATEAGMFA 360
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 167 bits (423), Expect = 2e-41 Identities = 90/189 (47%), Positives = 118/189 (62%), Gaps = 2/189 (1%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 ++GVL GPPGTGKTLLAKA+A E F SV E + M+ G + VRD+F +A+ AA Sbjct: 531 SKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAA 590 Query: 185 PSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 P ++F+DELD++ +RG S D D+ +NQLLTEMDG +S V V+ ATNRP +D Sbjct: 591 PCVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDP 650 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR + ++V +PD E R IL LR P+ ED ++ VA T G GADL Sbjct: 651 ALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDL--RAVAKATHGFSGADLEF 708 Query: 539 IVNEAALLA 565 +V A LA Sbjct: 709 VVQRAVKLA 717 Score = 162 bits (409), Expect = 8e-40 Identities = 82/184 (44%), Positives = 125/184 (67%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG+L+ GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ +P Sbjct: 259 RGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSP 318 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 +IIFIDE+D++ R ++ + + ++QLLT MDG + V+VMAATNRP ++D AL Sbjct: 319 AIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALR 378 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 R GRF R+V VG+PD GR +IL +H + + L +D ++ + +A T G VG+DLA++ + Sbjct: 379 RFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDL--EQIAAETHGYVGSDLASLCS 436 Query: 548 EAAL 559 EAA+ Sbjct: 437 EAAM 440
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 167 bits (422), Expect = 3e-41 Identities = 89/190 (46%), Positives = 118/190 (62%), Gaps = 3/190 (1%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 ++GVL GPPGTGKTLLAKAVA E F SV E + M+ G + +RD+F +A+ AA Sbjct: 521 SKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAA 580 Query: 185 PSIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 P+++F+DELD++ +RG S D D+ +NQLLTEMDG ++ V V+ ATNRP +D Sbjct: 581 PTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQID 640 Query: 356 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 A+ RPGR + ++V +PD R IL LRK PLE E+ +A T G GADL Sbjct: 641 PAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTA--IAKATQGFSGADLL 698 Query: 536 NIVNEAALLA 565 IV AA A Sbjct: 699 YIVQRAAKYA 708 Score = 162 bits (409), Expect = 8e-40 Identities = 81/184 (44%), Positives = 125/184 (67%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RGVL+ GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP Sbjct: 249 RGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAP 308 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 +IIFIDE+D++ R ++ + + ++QLLT MDG + V+V+AATNRP ++D AL Sbjct: 309 AIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALR 368 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 R GRF R+V +G+PD GR ++L +H + + L +D ++ + +A T G VGAD+A++ + Sbjct: 369 RFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDL--EALAAETHGYVGADIASLCS 426 Query: 548 EAAL 559 EAA+ Sbjct: 427 EAAM 430
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 166 bits (419), Expect = 6e-41 Identities = 86/189 (45%), Positives = 122/189 (64%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G++L GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 214 KGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKA 273 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 IIF DE+DA+GG+R G ++E +T+ +L+T++DGFD + V+ ATNRP LD Sbjct: 274 CIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDE 333 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RKV G+PDLEGR IL +H + + +++D I +L+A + P GA+L + Sbjct: 334 ALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKD--IRWELIARLCPSQTGAELRS 391 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 392 VCTEAGMFA 400
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 166 bits (419), Expect = 6e-41 Identities = 95/189 (50%), Positives = 119/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLAKAVA + F V SEFV+ ++G GA VR++F+ AKE AP Sbjct: 176 KGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAP 235 Query: 188 SIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIFIDELDA+ R S E +T+ QLL E+DGFD V V+ ATNR LD Sbjct: 236 SIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDP 295 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 A+ RPGRF R + V +P EGR +I +H RK+ L ED + +A +T G GAD+ Sbjct: 296 AILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDF--KELARITEGASGADIKA 353 Query: 539 IVNEAALLA 565 I EA + A Sbjct: 354 ICTEAGMFA 362
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 165 bits (418), Expect = 7e-41 Identities = 89/189 (47%), Positives = 122/189 (64%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLA+AVA G+ F V +S V+ ++G A +R++F AKE P Sbjct: 167 KGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEP 226 Query: 188 SIIFIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IF+DE+DA+GG S G S + E +TL +LL +MDGFD + ++ ATNRP LD Sbjct: 227 CVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDP 286 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ + +P+ GR +IL +HL KV + EI + + +T G GADL N Sbjct: 287 ALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKV--SKQGEIDYEALVKLTDGTNGADLRN 344 Query: 539 IVNEAALLA 565 +V EA +A Sbjct: 345 VVTEAGFIA 353
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 163 bits (412), Expect = 4e-40 Identities = 92/189 (48%), Positives = 118/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL G PGTGKTLLAKAVA F V SE V+ ++G G+ VR++F+ A++ AP Sbjct: 194 KGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAP 253 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIFIDELD++ R + E +TL QLL EMDGFD + ++AATNRP LD Sbjct: 254 SIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDP 313 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 A+ RPGRF R V V +P +E R KIL +H K+ L ED + +A T G+ GADL Sbjct: 314 AILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDF--KKLAKATEGMSGADLKA 371 Query: 539 IVNEAALLA 565 I EA + A Sbjct: 372 IATEAGMFA 380
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 163 bits (412), Expect = 4e-40 Identities = 82/184 (44%), Positives = 123/184 (66%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG+LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F E ++ +P Sbjct: 244 RGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSP 303 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 +I+FIDE+DA+ R ++ + + ++QLLT MDG + V+V+AATNRP ++D AL Sbjct: 304 AILFIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALR 363 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 R GRF R++ +G+PD GR +IL +H + + L ED ++ + VAN G VGADLA++ + Sbjct: 364 RFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDL--EQVANECHGFVGADLASLCS 421 Query: 548 EAAL 559 EAA+ Sbjct: 422 EAAI 425 Score = 157 bits (398), Expect = 2e-38 Identities = 83/190 (43%), Positives = 115/190 (60%), Gaps = 3/190 (1%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 +RGVL GPPG GKTLLAKA+A E F S+ E + M+ G A VRD+F +A+ AA Sbjct: 516 SRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAA 575 Query: 185 PSIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 P ++F DELD++ +RG S D D+ +NQ+LTEMDG ++ V ++ ATNRP +D Sbjct: 576 PCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIID 635 Query: 356 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 A+ RPGR + +++ +PD R +I LRK PL D ++ + +A T G GADL Sbjct: 636 PAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDL--NFLAKNTVGFSGADLT 693 Query: 536 NIVNEAALLA 565 I A LA Sbjct: 694 EICQRACKLA 703
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 163 bits (412), Expect = 4e-40 Identities = 85/184 (46%), Positives = 122/184 (66%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G+LL GPPG+GKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP Sbjct: 243 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP 302 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 SIIFIDE+D++ R ++ + + ++QLLT MDG S VIVM ATNRP ++D AL Sbjct: 303 SIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALR 362 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 R GRF R++ +GVPD GR ++L +H + + L ED ++ + V+ T G VGADLA + Sbjct: 363 RFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDL--ERVSKDTHGYVGADLAALCT 420 Query: 548 EAAL 559 EAAL Sbjct: 421 EAAL 424 Score = 153 bits (387), Expect = 3e-37 Identities = 80/190 (42%), Positives = 115/190 (60%), Gaps = 3/190 (1%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 ++GVL GPPG GKTLLAKA+A E F S+ E + M+ G A VR++F +A+++A Sbjct: 515 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSA 574 Query: 185 PSIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 P ++F DELD++ RG S D D+ LNQLLTEMDG ++ V ++ ATNRP +D Sbjct: 575 PCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIID 634 Query: 356 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 AL RPGR + +++ +PD E R +I LRK P+ +D ++ +A T G GAD+ Sbjct: 635 PALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDL--RALAKYTQGFSGADIT 692 Query: 536 NIVNEAALLA 565 I + A Sbjct: 693 EICQRSCKYA 702
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 162 bits (409), Expect = 8e-40 Identities = 84/184 (45%), Positives = 121/184 (65%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G+LL GPPG+GKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP Sbjct: 243 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP 302 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 SIIFIDE+D++ R ++ + + ++QLLT MDG S VIVM ATNRP ++D AL Sbjct: 303 SIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALR 362 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 R GRF R++ +GVPD GR ++L +H + + L E E+ + ++ T G VGADLA + Sbjct: 363 RFGRFDREIDIGVPDEVGRLEVLGIHTKNMKLAE--EVDLERISKDTHGYVGADLAALCT 420 Query: 548 EAAL 559 EAAL Sbjct: 421 EAAL 424 Score = 155 bits (391), Expect = 1e-37 Identities = 82/190 (43%), Positives = 115/190 (60%), Gaps = 3/190 (1%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 ++GVL GPPG GKTLLAKA+A E F SV E + M+ G A VR++F +A+++A Sbjct: 515 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 574 Query: 185 PSIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 P ++F DELD++ RG S D D+ LNQLLTEMDG ++ V ++ ATNRP +D Sbjct: 575 PCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIID 634 Query: 356 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 AL RPGR + +++ +PD + R +I LRK PL +D ++ +A T G GAD+ Sbjct: 635 PALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDL--RALAKHTQGFSGADVT 692 Query: 536 NIVNEAALLA 565 I A A Sbjct: 693 EICQRACKYA 702
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 162 bits (409), Expect = 8e-40 Identities = 83/184 (45%), Positives = 122/184 (66%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G+LL GPPG+GKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP Sbjct: 243 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP 302 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 SIIFIDE+D++ R ++ + + ++QLLT MDG S VIV+ ATNRP ++D AL Sbjct: 303 SIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALR 362 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 R GRF R++ +GVPD GR ++L +H + + L +D ++ + +A T G VGADLA + Sbjct: 363 RFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDL--ERIAKDTHGYVGADLAALCT 420 Query: 548 EAAL 559 EAAL Sbjct: 421 EAAL 424 Score = 152 bits (384), Expect = 6e-37 Identities = 80/190 (42%), Positives = 114/190 (60%), Gaps = 3/190 (1%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 ++GVL GPPG GKTLLAKA+A E F SV E + M+ G A VR++F +A+++A Sbjct: 515 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 574 Query: 185 PSIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 P ++F DELD++ RG S D D+ LNQLLTEMDG + V ++ ATNRP +D Sbjct: 575 PCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIID 634 Query: 356 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 AL RPGR + +++ +PD + R +I LRK P+ ++ ++ +A T G GAD+ Sbjct: 635 PALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDL--RALARHTQGFSGADIT 692 Query: 536 NIVNEAALLA 565 I A A Sbjct: 693 EICQRACKYA 702
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 162 bits (409), Expect = 8e-40 Identities = 84/184 (45%), Positives = 122/184 (66%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G+LL GPPG+GKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP Sbjct: 242 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP 301 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 SIIFIDE+D++ R ++ + + ++QLLT MDG S VIVM ATNRP ++D AL Sbjct: 302 SIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALR 361 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 R GRF R++ +GVPD GR ++L +H + + L ED ++ + ++ T G VGADLA + Sbjct: 362 RFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDL--ERISKDTHGYVGADLAALCT 419 Query: 548 EAAL 559 EAAL Sbjct: 420 EAAL 423 Score = 157 bits (396), Expect = 3e-38 Identities = 82/190 (43%), Positives = 115/190 (60%), Gaps = 3/190 (1%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 ++GVL GPPG GKTLLAKA+A E F SV E + M+ G A VR++F +A+++A Sbjct: 514 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 573 Query: 185 PSIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 P ++F DELD++ RG S D D+ LNQLLTEMDG ++ V ++ ATNRP +D Sbjct: 574 PCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIID 633 Query: 356 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 SAL RPGR + +++ +PD + R I LRK P+ +D ++ +A T G GAD+ Sbjct: 634 SALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTA--LAKYTQGFSGADIT 691 Query: 536 NIVNEAALLA 565 I A A Sbjct: 692 EICQRACKYA 701
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 162 bits (409), Expect = 8e-40 Identities = 84/184 (45%), Positives = 122/184 (66%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G+LL GPPG+GKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP Sbjct: 242 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP 301 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 SIIFIDE+D++ R ++ + + ++QLLT MDG S VIVM ATNRP ++D AL Sbjct: 302 SIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALR 361 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 R GRF R++ +GVPD GR ++L +H + + L ED ++ + ++ T G VGADLA + Sbjct: 362 RFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDL--ERISKDTHGYVGADLAALCT 419 Query: 548 EAAL 559 EAAL Sbjct: 420 EAAL 423 Score = 155 bits (391), Expect = 1e-37 Identities = 82/191 (42%), Positives = 114/191 (59%), Gaps = 4/191 (2%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 ++GVL GPPG GKTLLAKA+A E F SV E + M+ G A VR++F +A+++A Sbjct: 514 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 573 Query: 185 PSIIFIDELDAV----GGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 P ++F DELD++ GG G D+ LNQLLTEMDG ++ V ++ ATNRP + Sbjct: 574 PCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDII 633 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 DSAL RPGR + +++ +PD + R I LRK P+ +D +I +A T G GAD+ Sbjct: 634 DSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDI--GALAKYTQGFSGADI 691 Query: 533 ANIVNEAALLA 565 I A A Sbjct: 692 TEICQRACKYA 702
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 161 bits (407), Expect = 1e-39 Identities = 86/189 (45%), Positives = 120/189 (63%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL GPPGTGKTLLA+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 203 KGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKA 262 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 I+F DE+DA+GG+R G ++E +T+ +++ ++DGFD+ + V+ ATNRP LD Sbjct: 263 CIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDP 322 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RKV G+PDLEGR +I +H R + E D I +L+A + P GAD+ + Sbjct: 323 ALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERD--IRFELLARLCPNSTGADIRS 380 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 381 VCTEAGMYA 389
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 161 bits (407), Expect = 1e-39 Identities = 86/189 (45%), Positives = 120/189 (63%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL GPPGTGKTLLA+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 203 KGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKA 262 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 I+F DE+DA+GG+R G ++E +T+ +++ ++DGFD+ + V+ ATNRP LD Sbjct: 263 CIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDP 322 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RKV G+PDLEGR +I +H R + E D I +L+A + P GAD+ + Sbjct: 323 ALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERD--IRFELLARLCPNSTGADIRS 380 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 381 VCTEAGMYA 389
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 161 bits (407), Expect = 1e-39 Identities = 92/189 (48%), Positives = 118/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL G PGTGKTLLAKAVA F V SE V+ ++G G+ VR++F+ A++ AP Sbjct: 194 KGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAP 253 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIFIDELD++ R + E +TL QLL EMDGFD + ++AATNRP LD Sbjct: 254 SIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDP 313 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 A+ RPGRF R V V +P +E R KIL +H K+ L D + +A VT G+ GADL Sbjct: 314 AILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDF--KKLAKVTEGMSGADLKA 371 Query: 539 IVNEAALLA 565 I EA + A Sbjct: 372 IATEAGMFA 380
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 160 bits (405), Expect = 2e-39 Identities = 86/189 (45%), Positives = 120/189 (63%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 212 KGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKA 271 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IF DE+DAVGG+R G+ ++E +T+ +L+ ++DGFD + V+ ATNRP LD Sbjct: 272 CLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDP 331 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RKV +PDL GR IL +H +++ +E D I DL+A + P GA++ + Sbjct: 332 ALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERD--IRYDLLARLCPNSTGAEIRS 389 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 390 VCTEAGMFA 398
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 160 bits (405), Expect = 2e-39 Identities = 86/189 (45%), Positives = 118/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G+LL GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 244 KGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKA 303 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 IIF DE+DAVGG+R G ++E +T+ +L+T++DGFD + VM ATNRP LD Sbjct: 304 CIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDP 363 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RKV +PDLEGR I +H + + +E I +L++ + P GA+L + Sbjct: 364 ALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERG--IRWELISRLCPNSTGAELRS 421 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 422 VCTEAGMFA 430
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 159 bits (401), Expect = 7e-39 Identities = 85/189 (44%), Positives = 119/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL GPPGTGKTLLA+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 203 KGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKA 262 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 I+F DE+DA+GG+R G ++E +T+ +++ ++DGFD+ + V+ ATNRP LD Sbjct: 263 CIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDP 322 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RKV G+PDLE R +I +H R + E D I +L+A + P GAD+ + Sbjct: 323 ALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD--IRFELLARLCPNSTGADIRS 380 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 381 VCTEAGMYA 389
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 159 bits (401), Expect = 7e-39 Identities = 84/189 (44%), Positives = 118/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 210 KGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKA 269 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IF DE+DA+GG+R G ++E +T+ +L+ ++DGFD + V+ ATNRP LD Sbjct: 270 CLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDP 329 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PDLEGR I +H R + +E D I +L+A + P GA++ + Sbjct: 330 ALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD--IRFELLARLCPNSTGAEIRS 387 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 388 VCTEAGMFA 396
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 159 bits (401), Expect = 7e-39 Identities = 84/189 (44%), Positives = 118/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 209 KGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKA 268 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IF DE+DA+GG+R G ++E +T+ +L+ ++DGFD + V+ ATNRP LD Sbjct: 269 CLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDP 328 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PDLEGR I +H R + +E D I +L+A + P GA++ + Sbjct: 329 ALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD--IRFELLARLCPNSTGAEIRS 386 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 387 VCTEAGMFA 395
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 159 bits (401), Expect = 7e-39 Identities = 84/189 (44%), Positives = 118/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 209 KGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKA 268 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IF DE+DA+GG+R G ++E +T+ +L+ ++DGFD + V+ ATNRP LD Sbjct: 269 CLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDP 328 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PDLEGR I +H R + +E D I +L+A + P GA++ + Sbjct: 329 ALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD--IRFELLARLCPNSTGAEIRS 386 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 387 VCTEAGMFA 395
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 159 bits (401), Expect = 7e-39 Identities = 84/189 (44%), Positives = 118/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 209 KGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKA 268 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IF DE+DA+GG+R G ++E +T+ +L+ ++DGFD + V+ ATNRP LD Sbjct: 269 CLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDP 328 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PDLEGR I +H R + +E D I +L+A + P GA++ + Sbjct: 329 ALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD--IRFELLARLCPNSTGAEIRS 386 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 387 VCTEAGMFA 395
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 159 bits (401), Expect = 7e-39 Identities = 85/189 (44%), Positives = 119/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL GPPGTGKTLLA+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 202 KGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKA 261 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 I+F DE+DA+GG+R G ++E +T+ +++ ++DGFD+ + V+ ATNRP LD Sbjct: 262 CIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDP 321 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RKV G+PDLE R +I +H R + E D I +L+A + P GAD+ + Sbjct: 322 ALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD--IRFELLARLCPNSTGADIRS 379 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 380 VCTEAGMYA 388
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 158 bits (400), Expect = 9e-39 Identities = 85/187 (45%), Positives = 116/187 (62%), Gaps = 5/187 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G+LL GPPG GKTLLAKA+A E F SV E + M+ G A VRDLF +A+ A+P Sbjct: 969 KGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASP 1028 Query: 188 SIIFIDELDAVGGSR-GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 364 IIF DE+D++ R + ND D+ +NQ+LTE+DG + + ++AATNRP LD AL Sbjct: 1029 CIIFFDEIDSLAKERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKAL 1088 Query: 365 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI- 541 RPGR + +++ +PDL+ R I L+ PL ED +I +A T G GAD+ N+ Sbjct: 1089 TRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDI--HDMAKRTEGFSGADITNLC 1146 Query: 542 ---VNEA 553 VNEA Sbjct: 1147 QSAVNEA 1153 Score = 146 bits (369), Expect = 4e-35 Identities = 77/184 (41%), Positives = 116/184 (63%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL+ G PGTGKT +AKA+A E+ + ++ E + +G ++R +FK+A E P Sbjct: 562 KGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTP 621 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 IIFIDE+D++ R +S N+ + ++QLLT MDG + V+V+AATNRP ++D AL Sbjct: 622 CIIFIDEIDSIANKRSKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALR 681 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 R GRF R++ + VPD +GR +IL +K+ L+ D + +A G VGADLA + Sbjct: 682 RFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNL--RKIAKECHGYVGADLAQLCF 739 Query: 548 EAAL 559 EAA+ Sbjct: 740 EAAI 743
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 158 bits (400), Expect = 9e-39 Identities = 84/189 (44%), Positives = 120/189 (63%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G LL GPPGTGKTLLA+AVA + F V +S V+ ++G A +R++F A++ P Sbjct: 185 KGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQP 244 Query: 188 SIIFIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 I+F+DE+DA+GG S G S + E +TL +LL ++DGFDS KV V+ ATNRP LD Sbjct: 245 CIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDP 304 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +G+P+ + R +IL +H K+ + EI + V ++ G ADL N Sbjct: 305 ALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKI--TKHGEIDFEAVVKLSDGFSAADLRN 362 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 363 VCTEAGMFA 371
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 158 bits (400), Expect = 9e-39 Identities = 80/184 (43%), Positives = 122/184 (66%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG+LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+E ++ P Sbjct: 245 RGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQP 304 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 +I+FIDE+DA+ R ++ + + ++QLLT MDG ++V+AATNRP ++D AL Sbjct: 305 AILFIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALR 364 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 R GRF R++ +G+PD GR +IL +H + + L +D ++ + +AN G VGADLA++ + Sbjct: 365 RFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDL--EQIANECHGFVGADLASLCS 422 Query: 548 EAAL 559 EAAL Sbjct: 423 EAAL 426 Score = 157 bits (397), Expect = 2e-38 Identities = 83/191 (43%), Positives = 114/191 (59%), Gaps = 4/191 (2%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 +RGVL GPPG GKTLLAKA+A E F S+ E + M+ G A VRD+F +A+ AA Sbjct: 517 SRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAA 576 Query: 185 PSIIFIDELDAV----GGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 P ++F DELD++ GG G D+ +NQ+LTEMDG ++ V ++ ATNRP + Sbjct: 577 PCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDII 636 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D A+ RPGR + +++ +PD R +IL LRK PL +D ++ +A T G GADL Sbjct: 637 DPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDL--TFLAKNTVGFSGADL 694 Query: 533 ANIVNEAALLA 565 I A LA Sbjct: 695 TEICQRACKLA 705
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 155 bits (393), Expect = 6e-38 Identities = 88/189 (46%), Positives = 118/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLA+AVA F VS SE V+ F+G GA VR+LF A+E AP Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LDS Sbjct: 244 SIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDS 303 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ Sbjct: 304 ALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKG 361 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 362 VCTEAGMYA 370
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 155 bits (393), Expect = 6e-38 Identities = 88/189 (46%), Positives = 118/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLA+AVA F VS SE V+ F+G GA VR+LF A+E AP Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LDS Sbjct: 244 SIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDS 303 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ Sbjct: 304 ALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKG 361 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 362 VCTEAGMYA 370
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 155 bits (393), Expect = 6e-38 Identities = 88/189 (46%), Positives = 118/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLA+AVA F VS SE V+ F+G GA VR+LF A+E AP Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LDS Sbjct: 244 SIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDS 303 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ Sbjct: 304 ALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKG 361 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 362 VCTEAGMYA 370
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 155 bits (393), Expect = 6e-38 Identities = 88/189 (46%), Positives = 118/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLA+AVA F VS SE V+ F+G GA VR+LF A+E AP Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LDS Sbjct: 244 SIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDS 303 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ Sbjct: 304 ALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKG 361 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 362 VCTEAGMYA 370
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 155 bits (393), Expect = 6e-38 Identities = 88/189 (46%), Positives = 118/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLA+AVA F VS SE V+ F+G GA VR+LF A+E AP Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LDS Sbjct: 244 SIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDS 303 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ Sbjct: 304 ALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKG 361 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 362 VCTEAGMYA 370
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 155 bits (392), Expect = 8e-38 Identities = 82/189 (43%), Positives = 119/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G LL GPPGTGKTLLA+AVA + F V +S V+ ++G A +R++F A++ P Sbjct: 168 KGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQP 227 Query: 188 SIIFIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 IIF+DE+DA+GG S G S + E +TL +LL +MDGFD+ +V ++ ATNRP LD Sbjct: 228 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ + +P+ + R IL +H P+ + EI + + ++ G GADL N Sbjct: 288 ALLRPGRLDRKIHIDLPNEQARLDILKIHAG--PITKHGEIDYEAIVKLSDGFNGADLRN 345 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 346 VCTEAGMFA 354
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 155 bits (392), Expect = 8e-38 Identities = 82/189 (43%), Positives = 119/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G LL GPPGTGKTLLA+AVA + F V +S V+ ++G A +R++F A++ P Sbjct: 168 KGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQP 227 Query: 188 SIIFIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 IIF+DE+DA+GG S G S + E +TL +LL +MDGFD+ +V ++ ATNRP LD Sbjct: 228 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ + +P+ + R IL +H P+ + EI + + ++ G GADL N Sbjct: 288 ALLRPGRLDRKIHIDLPNEQARLDILKIHAG--PITKHGEIDYEAIVKLSDGFNGADLRN 345 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 346 VCTEAGMFA 354
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 155 bits (392), Expect = 8e-38 Identities = 82/189 (43%), Positives = 119/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G LL GPPGTGKTLLA+AVA + F V +S V+ ++G A +R++F A++ P Sbjct: 168 KGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQP 227 Query: 188 SIIFIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 IIF+DE+DA+GG S G S + E +TL +LL +MDGFD+ +V ++ ATNRP LD Sbjct: 228 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ + +P+ + R IL +H P+ + EI + + ++ G GADL N Sbjct: 288 ALLRPGRLDRKIHIDLPNEQARLDILKIHAG--PITKHGEIDYEAIVKLSDGFNGADLRN 345 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 346 VCTEAGMFA 354
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 155 bits (391), Expect = 1e-37 Identities = 87/189 (46%), Positives = 116/189 (61%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLAKAVA G F AS V+ ++G A +R++F AKE P Sbjct: 216 KGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEP 275 Query: 188 SIIFIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 IIF+DE+DA+GG S G S + E +TL +LLT+MDGFD+ + ++ ATNRP LD Sbjct: 276 CIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDP 335 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RKV + +P+ GR +I +H KV ++ E + ++ G GAD+ N Sbjct: 336 ALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKV--KKTGEFDFEAAVKMSDGFNGADIRN 393 Query: 539 IVNEAALLA 565 EA A Sbjct: 394 CATEAGFFA 402
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 152 bits (384), Expect = 6e-37 Identities = 86/189 (45%), Positives = 117/189 (61%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLA+AVA F VS SE V+ F+G G+ VR+LF A+E AP Sbjct: 183 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAP 242 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LD Sbjct: 243 SIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDP 302 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ Sbjct: 303 ALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKG 360 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 361 VCTEAGMYA 369
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 152 bits (384), Expect = 6e-37 Identities = 88/188 (46%), Positives = 118/188 (62%), Gaps = 3/188 (1%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+LL GPPGTGKTLLAKAVA E + F SV E + M+VG+ VR++F A+ AAP Sbjct: 740 GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPC 799 Query: 191 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 364 IIF DELD++ SRGRS + D+ ++QLL E+DG S V V+ ATNRP LD AL Sbjct: 800 IIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPAL 859 Query: 365 CRPGRFSRKVFVGV-PDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 RPGRF + VFVG D + ++L+ RK LE S + +++ P L GADL ++ Sbjct: 860 LRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEA-SVSLANVLDCCPPQLTGADLYSL 918 Query: 542 VNEAALLA 565 ++A + A Sbjct: 919 CSDAMMTA 926 Score = 51.6 bits (122), Expect = 2e-06 Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 1/177 (0%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 T VLL GPPG+GKT A G+ V S +++ F A+ Sbjct: 464 TSCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCR 523 Query: 185 PSIIFIDELDAVGGSRGRSFNDER-DQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 361 P+++ + +D +G R D R TL LL + D ++V+A T+R + L + Sbjct: 524 PAVLLLTAVDLLGRDRDGLGEDARVAATLRHLLLDEDALSRCPPLMVVATTSRVQDLPTD 583 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 + F ++ V V R IL +PL + E+ +A G V DL Sbjct: 584 V--QTAFPHELEVPVLSEAQRLSILQALTAHLPLGQ--EVNLPQLARRCAGFVVGDL 636
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 152 bits (384), Expect = 6e-37 Identities = 86/189 (45%), Positives = 117/189 (61%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLA+AVA F VS SE V+ F+G G+ VR+LF A+E AP Sbjct: 180 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAP 239 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LD Sbjct: 240 SIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDP 299 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ Sbjct: 300 ALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKG 357 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 358 VCTEAGMYA 366
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 152 bits (383), Expect = 8e-37 Identities = 88/188 (46%), Positives = 118/188 (62%), Gaps = 3/188 (1%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+LL GPPGTGKTLLAKAVA E + F SV E + M+VG+ VR++F A+ AAP Sbjct: 737 GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPC 796 Query: 191 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 364 IIF DELD++ SRGRS + D+ ++QLL E+DG S V V+ ATNRP LD AL Sbjct: 797 IIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPAL 856 Query: 365 CRPGRFSRKVFVGV-PDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 RPGRF + VFVG D + ++L+ RK LE S + +++ P L GADL ++ Sbjct: 857 LRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEA-SVSLMNVLDCCPPQLTGADLYSL 915 Query: 542 VNEAALLA 565 ++A + A Sbjct: 916 CSDAMMTA 923 Score = 52.8 bits (125), Expect = 7e-07 Identities = 49/188 (26%), Positives = 77/188 (40%), Gaps = 1/188 (0%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 T VLL GPPG+GKT A G+ V S +++ F A+ Sbjct: 463 TSCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCR 522 Query: 185 PSIIFIDELDAVGGSRGRSFNDER-DQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 361 P ++ + LD +G R D R TL LL + D ++V+A T+R + L + Sbjct: 523 PVVLLLTALDLLGRDRDGLGEDARVVATLRHLLLDEDPLSRCPPLMVVATTSRVQDLPTD 582 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 + F ++ V V R +L +PL + E+ +A G V DL + Sbjct: 583 V--RTAFPHELEVPVLSESQRLSVLQALTAHLPLGQ--EVNLSQLARRCAGFVVGDLYAL 638 Query: 542 VNEAALLA 565 + A+ A Sbjct: 639 LTHASRAA 646
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 152 bits (383), Expect = 8e-37 Identities = 86/188 (45%), Positives = 116/188 (61%), Gaps = 2/188 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLA+AVA F VS SE V+ F+G GA VR+LF A+E AP Sbjct: 179 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 238 Query: 188 SIIFIDELDAVGG--SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 361 SIIF+DE+D++G G + E +T+ +LL ++DGF++ + V+ ATNR LDSA Sbjct: 239 SIIFMDEIDSIGSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSA 298 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 L RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ + Sbjct: 299 LLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKGV 356 Query: 542 VNEAALLA 565 EA + A Sbjct: 357 CTEAGMYA 364
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 151 bits (382), Expect = 1e-36 Identities = 87/188 (46%), Positives = 117/188 (62%), Gaps = 3/188 (1%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+LL GPPGTGKTLLAKAVA E + F SV E + M+VG+ VR++F A+ AAP Sbjct: 739 GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPC 798 Query: 191 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 364 IIF DELD++ SRGRS + D+ ++QLL E+DG S V V+ ATNRP LD AL Sbjct: 799 IIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPAL 858 Query: 365 CRPGRFSRKVFVGV-PDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 RPGRF + VFVG D + ++L+ RK LE ++ +++ P L GADL ++ Sbjct: 859 LRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLV-NVLDCCPPQLTGADLYSL 917 Query: 542 VNEAALLA 565 ++A A Sbjct: 918 CSDAMTAA 925 Score = 55.1 bits (131), Expect = 1e-07 Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 1/117 (0%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 T VLL GPPG GKT + A G+ V S G +++ +F A+ Sbjct: 463 TSSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCR 522 Query: 185 PSIIFIDELDAVGGSRGRSFNDERDQ-TLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 P+++ + +D +G R D R L LL D +S ++V+A T+R + L Sbjct: 523 PAVLLLTAVDLLGRDRDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSRAQDL 579
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 151 bits (382), Expect = 1e-36 Identities = 87/189 (46%), Positives = 120/189 (63%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GV+L GPPGTGKTLLAKAVA + F V SE ++ ++G G VR+LF+ A+E AP Sbjct: 219 KGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAP 278 Query: 188 SIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SI+FIDE+DAVG R S + E +T+ +LL ++DGFDS V V+ ATNR + LD Sbjct: 279 SIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDP 338 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PD + +R+I +H ++ L ED + ++A L GAD+ Sbjct: 339 ALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAK--DDLSGADIKA 396 Query: 539 IVNEAALLA 565 I EA L+A Sbjct: 397 ICTEAGLMA 405
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 150 bits (380), Expect = 2e-36 Identities = 88/191 (46%), Positives = 115/191 (60%), Gaps = 6/191 (3%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+LLAGPPG GKTLLAKAVA E+G+ F SV E + M+VG VR +F+ AK +AP Sbjct: 616 GILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPC 675 Query: 191 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 370 +IF DE+DA+ R + +NQLLTEMDG ++ +V ++AATNRP +D A+ R Sbjct: 676 VIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILR 735 Query: 371 PGRFSRKVFVGVPDLEGRRKILAVHLR---KVPLEED---SEIICDLVANVTPGLVGADL 532 PGR + +FVG+P R IL + K PL+ED I DL N GADL Sbjct: 736 PGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNC---YTGADL 792 Query: 533 ANIVNEAALLA 565 +V EA+L A Sbjct: 793 TALVREASLCA 803 Score = 149 bits (376), Expect = 5e-36 Identities = 88/189 (46%), Positives = 116/189 (61%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RGVLL GPPG GKTLLA A+AGE +P V+A E V G ++R+LF +A AP Sbjct: 298 RGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAP 357 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFD---SDVKVIVMAATNRPKALDS 358 I+FIDE+DA+ R + D + + QLLT MD + + +V+V+ ATNRP +LD Sbjct: 358 CIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDP 417 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL R GRF R+V +G+PD R +IL RK+ L E C L A++TPG VGADL Sbjct: 418 ALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFN-FCHL-AHLTPGFVGADLMA 475 Query: 539 IVNEAALLA 565 + EAA+ A Sbjct: 476 LCREAAMCA 484
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 150 bits (379), Expect = 2e-36 Identities = 85/189 (44%), Positives = 118/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G L+ GPPGTGKTLLA+A A + F ++A + V+M++G GA VRD F AKE AP Sbjct: 216 KGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAP 275 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IIFIDELDA+G R +S + E +T+ +LL ++DGF SD +V V+AATNR LD Sbjct: 276 TIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDP 335 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL R GR RK+ +P + R +IL +H RK+ ++D I +A T GA L Sbjct: 336 ALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDD--INWQELARSTDEFNGAQLKA 393 Query: 539 IVNEAALLA 565 + EA ++A Sbjct: 394 VTVEAGMIA 402
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 150 bits (379), Expect = 2e-36 Identities = 87/188 (46%), Positives = 118/188 (62%), Gaps = 3/188 (1%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 GVLL GPPGTGKTL+AKAVA + F ++ SE V F+G GA VRDLF+ A++ P+ Sbjct: 185 GVLLHGPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPA 244 Query: 191 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 361 ++FIDE+DA+ R S + E +T+ QLL+EMDGFD + ++AATNR LD A Sbjct: 245 VVFIDEIDAIASKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRA 304 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 + RPGRF R + V P++ GR KI +H R + + DS +L A+ T L GAD+ I Sbjct: 305 ILRPGRFDRLIEVPHPNVGGREKIFRIHTRAMNV-ADSVDFGELAAD-TGDLSGADVKAI 362 Query: 542 VNEAALLA 565 EA + A Sbjct: 363 CTEAGMFA 370
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 150 bits (378), Expect = 3e-36 Identities = 88/188 (46%), Positives = 119/188 (63%), Gaps = 3/188 (1%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 GVLL GPPGTGKT+LAKAVA + F ++ SE V F+G G+ VRDLF+ A++ P+ Sbjct: 188 GVLLHGPPGTGKTMLAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPA 247 Query: 191 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 361 IIFIDE+DAV R S + E +T+ QLL+EMDGFD + ++AATNR LDSA Sbjct: 248 IIFIDEIDAVAAKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSA 307 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 + RPGRF R + V P+ + R +IL +H ++ + DS DL A+ T GA LA++ Sbjct: 308 ILRPGRFDRLIEVPNPNPDARERILEIHAGEMNV-ADSVDFSDLAAD-TAEFSGAQLASL 365 Query: 542 VNEAALLA 565 EA + A Sbjct: 366 ATEAGMFA 373
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 149 bits (377), Expect = 4e-36 Identities = 84/190 (44%), Positives = 116/190 (61%), Gaps = 4/190 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG+LL GPPG KT LAKA A A FFS+S +E M+VG G A +R+ F+ A+ A+P Sbjct: 321 RGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASP 380 Query: 188 SIIFIDELDAVGGSRGRSFNDER----DQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 SIIF DE D V RG + ++ L+ LLTEMDG + ++V+AATNRP A+D Sbjct: 381 SIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAID 440 Query: 356 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 +AL RPGRF ++V PDLE R +IL VH R + L +D ++ +A T GA+L Sbjct: 441 AALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDL--RKIAEETDLFTGAELE 498 Query: 536 NIVNEAALLA 565 + E+ ++ Sbjct: 499 GLCRESGTVS 508 Score = 103 bits (257), Expect = 3e-22 Identities = 74/194 (38%), Positives = 100/194 (51%), Gaps = 7/194 (3%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA- 184 RG+LL GPPGTGKT L +AV E +S G +R+ F EA A Sbjct: 57 RGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAV 116 Query: 185 ---PSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDG---FDSDVKVIVMAATNRPK 346 PS+IFIDE+D + R ++ + +QL T MD S +V+V+A+TNR Sbjct: 117 SDKPSVIFIDEIDVLCPRRDAR-REQDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVD 175 Query: 347 ALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGA 526 A+D AL R GRF V V P+ E R KIL ++ +KV L D + +A G VGA Sbjct: 176 AIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNL--DPSVDLQAIAISCNGYVGA 233 Query: 527 DLANIVNEAALLAA 568 DL + EA + A+ Sbjct: 234 DLEALCREATISAS 247
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 149 bits (377), Expect = 4e-36 Identities = 83/190 (43%), Positives = 116/190 (61%), Gaps = 4/190 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G+LL GPPGTGKTLLA+AVA F VS SE V+ ++G G+ VR+LF A+E AP Sbjct: 180 KGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 239 Query: 188 SIIFIDELDAVGGSR----GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 SIIF+DE+D++G SR G S + E +T+ +LL ++DGF++ + V+ ATNR LD Sbjct: 240 SIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 299 Query: 356 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 AL RPGR RK+ P E R +IL +H R + L ++ +A G GA+L Sbjct: 300 PALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDL--KSIAEKMNGASGAELK 357 Query: 536 NIVNEAALLA 565 + EA + A Sbjct: 358 GVCTEAGMFA 367
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 149 bits (377), Expect = 4e-36 Identities = 84/189 (44%), Positives = 119/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GV+L GPPGTGKTLLAKAVA + F V SE ++ ++G G VR+LF+ A+E AP Sbjct: 220 KGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAP 279 Query: 188 SIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SI+FIDE+DA+G R S + E +T+ +LL ++DGFDS V V+ ATNR + LD Sbjct: 280 SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDP 339 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PD + +++I +H ++ L +D + D + L GAD+ Sbjct: 340 ALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADD--VTLDDLIMAKDDLSGADIKA 397 Query: 539 IVNEAALLA 565 I EA L+A Sbjct: 398 ICTEAGLMA 406
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 149 bits (377), Expect = 4e-36 Identities = 84/189 (44%), Positives = 119/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GV+L GPPGTGKTLLAKAVA + F V SE ++ ++G G VR+LF+ A+E AP Sbjct: 220 KGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAP 279 Query: 188 SIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SI+FIDE+DA+G R S + E +T+ +LL ++DGFDS V V+ ATNR + LD Sbjct: 280 SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDP 339 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PD + +++I +H ++ L +D + D + L GAD+ Sbjct: 340 ALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADD--VTLDDLIMAKDDLSGADIKA 397 Query: 539 IVNEAALLA 565 I EA L+A Sbjct: 398 ICTEAGLMA 406
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 149 bits (377), Expect = 4e-36 Identities = 84/189 (44%), Positives = 119/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GV+L GPPGTGKTLLAKAVA + F V SE ++ ++G G VR+LF+ A+E AP Sbjct: 220 KGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAP 279 Query: 188 SIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SI+FIDE+DA+G R S + E +T+ +LL ++DGFDS V V+ ATNR + LD Sbjct: 280 SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDP 339 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PD + +++I +H ++ L +D + D + L GAD+ Sbjct: 340 ALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADD--VTLDDLIMAKDDLSGADIKA 397 Query: 539 IVNEAALLA 565 I EA L+A Sbjct: 398 ICTEAGLMA 406
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 149 bits (376), Expect = 5e-36 Identities = 87/189 (46%), Positives = 118/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RGVLL GPPG GKTLLA A+AGE +P V+A E V G ++R+LF++A AP Sbjct: 299 RGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAP 358 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFD---SDVKVIVMAATNRPKALDS 358 IIFIDE+DA+ R + D + + QLLT MD + + +V+V+ ATNRP +LD Sbjct: 359 CIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDP 418 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL R GRF R++ +G+PD R +IL RK+ L + + C L A++TPG VGADL Sbjct: 419 ALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFD-FCHL-AHLTPGFVGADLMA 476 Query: 539 IVNEAALLA 565 + EAA+ A Sbjct: 477 LCREAAMCA 485 Score = 148 bits (374), Expect = 9e-36 Identities = 86/195 (44%), Positives = 115/195 (58%), Gaps = 10/195 (5%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 GVLLAGPPG GKTLLAKAVA E+G+ F SV E + M+VG VR +F+ AK +AP Sbjct: 617 GVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPC 676 Query: 191 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 370 +IF DE+DA+ R + +NQLLTEMDG ++ +V +MAATNRP +D A+ R Sbjct: 677 VIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILR 736 Query: 371 PGRFSRKVFVGVPDLEGRRKILAVHLR---KVPLEED-------SEIICDLVANVTPGLV 520 PGR + +FVG+P R IL + K PL+ D ++ CD Sbjct: 737 PGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDC-------YT 789 Query: 521 GADLANIVNEAALLA 565 GADL+ +V EA++ A Sbjct: 790 GADLSALVREASICA 804
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 148 bits (374), Expect = 9e-36 Identities = 83/189 (43%), Positives = 118/189 (62%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GV+L GPPGTGKTLLAKAVA + F V SE ++ ++G G VR+LF+ A+E P Sbjct: 220 KGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGP 279 Query: 188 SIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SI+FIDE+DA+G R S + E +T+ +LL ++DGFDS V V+ ATNR + LD Sbjct: 280 SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDP 339 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PD + +++I +H ++ L +D + D + L GAD+ Sbjct: 340 ALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADD--VTLDELIMAKDDLSGADIKA 397 Query: 539 IVNEAALLA 565 I EA L+A Sbjct: 398 ICTEAGLMA 406
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 148 bits (373), Expect = 1e-35 Identities = 85/189 (44%), Positives = 122/189 (64%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G L+ GPPGTGKTLLA+A A ++ F ++A + V+MF+G GA VRD F AKE +P Sbjct: 220 KGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSP 279 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IIFIDELDA+G R ++ + E +T+ +LL ++DGF SD +V V+AATNR LD Sbjct: 280 AIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDP 339 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL R GR RK+ +P+ E R IL +H RK+ +++D I + +A T GA L + Sbjct: 340 ALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDD--INWEELARSTDEYNGAMLKS 397 Query: 539 IVNEAALLA 565 + EA ++A Sbjct: 398 VCVEAGMIA 406
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 147 bits (371), Expect = 2e-35 Identities = 83/189 (43%), Positives = 114/189 (60%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GV+L G PGTGKTLLAKAVA + F + SE ++ ++G G R +FK A E AP Sbjct: 217 KGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAP 276 Query: 188 SIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SI+FIDE+DA+G R S + E +T+ +LL ++DGFD V V+ ATN+ + LD Sbjct: 277 SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDP 336 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ PDL ++KIL +H K+ L ED + + + L GAD+ Sbjct: 337 ALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNL--ETLVTTKDDLSGADIQA 394 Query: 539 IVNEAALLA 565 + EA LLA Sbjct: 395 MCTEAGLLA 403
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 147 bits (370), Expect = 3e-35 Identities = 84/189 (44%), Positives = 116/189 (61%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GV+L G PGTGKTLLAKAVA F V SE ++ ++G G VR+LF+ A E +P Sbjct: 228 KGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSP 287 Query: 188 SIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SI+FIDE+DAVG R + + E +T+ +LL ++DGFDS V V+ ATNR ++LD Sbjct: 288 SIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDP 347 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PD++ RR+I +H K+ L +D + + GAD+ Sbjct: 348 ALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNL--EEFVMTKDEFSGADIKA 405 Query: 539 IVNEAALLA 565 I EA LLA Sbjct: 406 ICTEAGLLA 414
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 147 bits (370), Expect = 3e-35 Identities = 85/189 (44%), Positives = 116/189 (61%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTL+A+A A + F ++ + V+MF+G GA VRD F+ AKE AP Sbjct: 206 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAP 265 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 IIFIDE+DA+G R S + E +T+ +LL ++DGF SD ++ V+AATNR LD Sbjct: 266 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDP 325 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL R GR RK+ P E R +IL +H RK+ + D + + +A T GA L Sbjct: 326 ALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPD--VNFEELARSTDDFNGAQLKA 383 Query: 539 IVNEAALLA 565 + EA +LA Sbjct: 384 VCVEAGMLA 392
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 147 bits (370), Expect = 3e-35 Identities = 80/186 (43%), Positives = 112/186 (60%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPG KTL AKA+A E+GI F +V E +VG +R++F++A+ AAP Sbjct: 551 KGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAP 610 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 367 SIIF DE+DA+ R S + L LL E+DG + V+++AATNRP +D+AL Sbjct: 611 SIIFFDEIDALSPDRDGSSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALL 670 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 RPGR R ++VG PD+ R +IL +K EE + +L A+ T G GA++ + Sbjct: 671 RPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHEL-ADRTEGYSGAEVVLLCQ 729 Query: 548 EAALLA 565 EA L A Sbjct: 730 EAGLAA 735 Score = 140 bits (354), Expect = 2e-33 Identities = 77/188 (40%), Positives = 116/188 (61%), Gaps = 4/188 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG+LL GPPGTGKT+L + VA + +++ V ++G A +RD+F EA++ P Sbjct: 280 RGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQP 339 Query: 188 SIIFIDELDAVGGSRGRSFNDE-RDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 364 SIIFIDE+D++ +R + E + + LLT MDG + KV+V+AATNRP ++D AL Sbjct: 340 SIIFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPAL 399 Query: 365 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE---DSEIICDLVANVTPGLVGADLA 535 RPGRF ++V +G+PD++ R IL ++ + DSE I +A+ T G VGADL Sbjct: 400 RRPGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAI-KYIASKTHGYVGADLT 458 Query: 536 NIVNEAAL 559 + E+ + Sbjct: 459 ALCRESVM 466
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 146 bits (369), Expect = 4e-35 Identities = 85/190 (44%), Positives = 115/190 (60%), Gaps = 4/190 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTLLA+AVA F VS SE V+ ++G G+ VR+LF A+E AP Sbjct: 166 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAP 225 Query: 188 SIIFIDELDAVGGSRGRS----FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 SIIF+DE+D++G SRG S + E +T+ +LL ++DGF+S + V+ TNR LD Sbjct: 226 SIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILD 285 Query: 356 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 AL RPGR RK+ P GR IL +H RK+ L I +++ G GA+L Sbjct: 286 PALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRG--INLKKISDKMNGASGAELK 343 Query: 536 NIVNEAALLA 565 + EA + A Sbjct: 344 AVCTEAGMYA 353
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 146 bits (368), Expect = 5e-35 Identities = 84/189 (44%), Positives = 116/189 (61%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTL+A+A A + F ++ + V+MF+G GA VRD F+ AKE +P Sbjct: 211 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSP 270 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 IIFIDE+DA+G R S + E +T+ +LL ++DGF SD ++ V+AATNR LD Sbjct: 271 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDP 330 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL R GR RK+ P E R +IL +H RK+ + D + + +A T GA L Sbjct: 331 ALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPD--VNFEELARSTDDFNGAQLKA 388 Query: 539 IVNEAALLA 565 + EA +LA Sbjct: 389 VCVEAGMLA 397
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 145 bits (366), Expect = 8e-35 Identities = 84/189 (44%), Positives = 116/189 (61%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTL+A+A A + F ++ + V+MF+G GA VRD F+ AKE +P Sbjct: 205 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSP 264 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 IIFIDE+DA+G R S + E +T+ +LL ++DGF SD ++ V+AATNR LD Sbjct: 265 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDP 324 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL R GR RK+ P E R +IL +H RK+ + D + + +A T GA L Sbjct: 325 ALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPD--VNFEELARSTDDFNGAQLKA 382 Query: 539 IVNEAALLA 565 + EA +LA Sbjct: 383 VCVEAGMLA 391
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 145 bits (365), Expect = 1e-34 Identities = 82/189 (43%), Positives = 116/189 (61%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL+ GPPGTGKTLLA+A A + F ++ + V+MF+G GA VRD F AKE AP Sbjct: 186 KGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAP 245 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIFIDELDA+G R ++ + E +T+ +LL ++DGF +V V+AATNR LD Sbjct: 246 SIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDP 305 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL R GR RK+ +P+ E R +I+ +H RK+ + D + + +A T GA Sbjct: 306 ALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPD--VNYEELARCTDDFNGAQCKA 363 Query: 539 IVNEAALLA 565 + EA ++A Sbjct: 364 VCVEAGIIA 372
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 144 bits (364), Expect = 1e-34 Identities = 82/189 (43%), Positives = 117/189 (61%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL+ GPPGTGKTLLA+A A + F ++ + V+MF+G GA VRD F AKE AP Sbjct: 221 KGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAP 280 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIFIDELDA+G R ++ + E +T+ +LL ++DGF + +V V+AATNR LD Sbjct: 281 SIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDP 340 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL R GR RK+ +P+ E R +I+ +H RK+ + D + + +A T GA Sbjct: 341 ALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPD--VNYEELARCTDDFNGAQCKA 398 Query: 539 IVNEAALLA 565 + EA ++A Sbjct: 399 VCVEAGMIA 407
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 144 bits (364), Expect = 1e-34 Identities = 82/189 (43%), Positives = 117/189 (61%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL+ GPPGTGKTLLA+A A + F ++ + V+MF+G GA VRD F AKE AP Sbjct: 221 KGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAP 280 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIFIDELDA+G R ++ + E +T+ +LL ++DGF + +V V+AATNR LD Sbjct: 281 SIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDP 340 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL R GR RK+ +P+ E R +I+ +H RK+ + D + + +A T GA Sbjct: 341 ALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPD--VNYEELARCTDDFNGAQCKA 398 Query: 539 IVNEAALLA 565 + EA ++A Sbjct: 399 VCVEAGMIA 407
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 144 bits (363), Expect = 2e-34 Identities = 82/189 (43%), Positives = 117/189 (61%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL+ GPPGTGKTLLA+A A + F ++ + V+MF+G GA VRD F AKE AP Sbjct: 224 KGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAP 283 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIFIDELDA+G R ++ + E +T+ +LL ++DGF + +V V+AATNR LD Sbjct: 284 SIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDP 343 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL R GR RK+ +P+ E R +I+ +H RK+ + D + + +A T GA Sbjct: 344 ALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPD--VNYEELARCTDDFNGAQSKA 401 Query: 539 IVNEAALLA 565 + EA ++A Sbjct: 402 VCVEAGMIA 410
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 144 bits (363), Expect = 2e-34 Identities = 83/189 (43%), Positives = 117/189 (61%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GV+L G PGTGKTLLAKAVA + F + SE ++ ++G G VR+LF+ A+E AP Sbjct: 223 KGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAP 282 Query: 188 SIIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SI+FIDE+DAVG R S + E +T+ +LL ++DGFDS V V+ ATNR ++LD Sbjct: 283 SIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDP 342 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PD + +R+I +H ++ L E+ + L GAD+ Sbjct: 343 ALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTL--GKEVNLEEFITAKDELSGADIKA 400 Query: 539 IVNEAALLA 565 + EA LLA Sbjct: 401 MCTEAGLLA 409
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 144 bits (362), Expect = 2e-34 Identities = 84/189 (44%), Positives = 115/189 (60%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKTL+A+A A + F ++ + V+MF+G GA VRD F AKE +P Sbjct: 201 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSP 260 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 IIFIDE+DA+G R S + E +T+ +LL ++DGF SD ++ V+AATNR LD Sbjct: 261 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDP 320 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL R GR RK+ P E R +IL +H RK+ + D + + +A T GA L Sbjct: 321 ALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNAD--VNFEELARSTDDFNGAQLKA 378 Query: 539 IVNEAALLA 565 + EA +LA Sbjct: 379 VCVEAGMLA 387
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 143 bits (361), Expect = 3e-34 Identities = 82/189 (43%), Positives = 115/189 (60%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GV+L GPPGTGKTLLA+AVA F VS +E V+ ++G G+ VR+LF A+E AP Sbjct: 183 KGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAP 242 Query: 188 SIIFIDELDAVGGSR--GRSFND-ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIF+DE+D++G +R G D E +T+ +LL ++DGF++ + ++ ATNR LD Sbjct: 243 SIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDP 302 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ P + R +IL +H RK+ L I VA G GAD+ Sbjct: 303 ALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRG--INLRKVAEKMNGCSGADVKG 360 Query: 539 IVNEAALLA 565 + EA + A Sbjct: 361 VCTEAGMYA 369
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 143 bits (361), Expect = 3e-34 Identities = 86/189 (45%), Positives = 115/189 (60%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RGVL+ GPPG GKT+LAKAVA F V SEFV+ ++G G VRD+F+ AKE AP Sbjct: 200 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAP 259 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IIFIDE+DA+ R + E + L +LL +MDGFD +V V V+ ATNR LD Sbjct: 260 AIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDP 319 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PD +R I + K+ L E+ ++ D VA + GAD+ + Sbjct: 320 ALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE-DYVAR-PDKISGADINS 377 Query: 539 IVNEAALLA 565 I E+ +LA Sbjct: 378 ICQESGMLA 386
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 143 bits (361), Expect = 3e-34 Identities = 86/189 (45%), Positives = 115/189 (60%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RGVL+ GPPG GKT+LAKAVA F V SEFV+ ++G G VRD+F+ AKE AP Sbjct: 200 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAP 259 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IIFIDE+DA+ R + E + L +LL +MDGFD +V V V+ ATNR LD Sbjct: 260 AIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDP 319 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PD +R I + K+ L E+ ++ D VA + GAD+ + Sbjct: 320 ALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE-DYVAR-PDKISGADINS 377 Query: 539 IVNEAALLA 565 I E+ +LA Sbjct: 378 ICQESGMLA 386
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 143 bits (360), Expect = 4e-34 Identities = 86/192 (44%), Positives = 116/192 (60%), Gaps = 6/192 (3%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GV+L G PGTGKTLLAKAVA + F V SE ++ ++G G VR LF A+E +P Sbjct: 226 KGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSP 285 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDS---DVKVIVMAATNRPKA 349 SI+FIDE+DA+G R E +T+ +LL ++DGFD+ D+KVI+ ATNR Sbjct: 286 SIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIM--ATNRISD 343 Query: 350 LDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGAD 529 LD AL RPGR RK+ PD +RKI +H K+ L ED + + + L GA+ Sbjct: 344 LDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNL--EELIQCKDDLSGAE 401 Query: 530 LANIVNEAALLA 565 + IV+EA LLA Sbjct: 402 IKAIVSEAGLLA 413
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 141 bits (356), Expect = 1e-33 Identities = 80/187 (42%), Positives = 111/187 (59%), Gaps = 10/187 (5%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+L GPPG GKT LA A+A EAG+PF+ +SA+E + G +R+LF +A APS Sbjct: 269 GILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPS 328 Query: 191 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDG----------FDSDVKVIVMAATNR 340 I+FIDE+DA+G R + + + QLLT MDG S V+V+ ATNR Sbjct: 329 IVFIDEIDAIGSKRENQQREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNR 388 Query: 341 PKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLV 520 P ALD AL R GRF ++ + PD + R +IL+V +K+ LE + +A +TPG V Sbjct: 389 PDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFD--KKRIARLTPGFV 446 Query: 521 GADLANI 541 GADL ++ Sbjct: 447 GADLESV 453 Score = 136 bits (342), Expect = 5e-32 Identities = 76/185 (41%), Positives = 107/185 (57%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G LL GPPG GKTL+AKA A EAG F + +E + +VG +R LF+ A+ AP Sbjct: 564 GFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPC 623 Query: 191 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 370 +IF DE+DA+ SRG+ ++ LNQ L E+DG + V V+ ATNRP +D A R Sbjct: 624 VIFFDEVDALTTSRGKEGAWVVERLLNQFLVELDGGERR-NVYVIGATNRPDVVDPAFLR 682 Query: 371 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 550 PGRF ++V +P+ + R IL RK P++ + + + N G GADLA++V + Sbjct: 683 PGRFGNLLYVPLPNADERASILKAIARKKPIDPSVD-LDGIAKNNCEGFSGADLAHLVQK 741 Query: 551 AALLA 565 A A Sbjct: 742 ATFQA 746
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 141 bits (355), Expect = 1e-33 Identities = 75/158 (47%), Positives = 105/158 (66%), Gaps = 3/158 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL+ GPPGTGKTLLA+A A + F ++ + V+MF+G GA VRD F AKE AP Sbjct: 205 KGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAP 264 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIFIDELDA+G R ++ + E +T+ +LL ++DGF +++V V+AATNR LD Sbjct: 265 SIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDP 324 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEED 472 AL R GR RK+ +P+ E R +I+ +H RK+ + D Sbjct: 325 ALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPD 362
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 140 bits (354), Expect = 2e-33 Identities = 85/189 (44%), Positives = 114/189 (60%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RGVLL GPPGTGKT+LAKAVA F V SEFV+ ++G G VRD+F+ AKE AP Sbjct: 190 RGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAP 249 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IIFIDE+DA+ +R + E + L +LL +MDGFD V V V+ ATNR LD Sbjct: 250 AIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDP 309 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PD +R + V K+ L ++ ++ D V+ + A++A Sbjct: 310 ALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLE-DYVSR-PDKISAAEIAA 367 Query: 539 IVNEAALLA 565 I EA + A Sbjct: 368 ICQEAGMHA 376
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 140 bits (354), Expect = 2e-33 Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 4/189 (2%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+L GPPGTGKTL+AKA+A + FFSV E + M++G A VR +F++A+EA P Sbjct: 767 GILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPC 826 Query: 191 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSA 361 +IF DE+D+V RG + D+ ++QLL E+DG +D V V+ ATNRP LD A Sbjct: 827 VIFFDEIDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEA 886 Query: 362 LCRPGRFSRKVFVGVPDLEGRR-KILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 L RPGRF + +++G+PD + ++ IL RK L+ D ++I +L GAD Sbjct: 887 LLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLI-ELAKLCPFNYTGADFYA 945 Query: 539 IVNEAALLA 565 + ++A L A Sbjct: 946 LCSDAMLNA 954
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 140 bits (353), Expect = 3e-33 Identities = 85/189 (44%), Positives = 114/189 (60%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RGVLL GPPGTGKT+LAKAVA F V SEFV+ ++G G VRD+F+ A+E +P Sbjct: 185 RGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSP 244 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IIFIDE+DA+ R + E + L +LL +MDGFD V V V+ ATNR LD Sbjct: 245 AIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDP 304 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PD +R I V K+ L ++ ++ D V+ L GA++ + Sbjct: 305 ALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLE-DYVSR-PDKLSGAEIQS 362 Query: 539 IVNEAALLA 565 I EA + A Sbjct: 363 ICQEAGMHA 371
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 140 bits (353), Expect = 3e-33 Identities = 87/190 (45%), Positives = 115/190 (60%), Gaps = 4/190 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RGVLL GPPGTGKT+L KAVA F V+ SEFV ++G G VRD+F+ A+E AP Sbjct: 207 RGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAP 266 Query: 188 SIIFIDELDAVGGSR--GRSFND-ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIFIDE+D++ R ++ +D E + L +LLT+MDGFD V V+ ATNR LD Sbjct: 267 SIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDP 326 Query: 359 ALCRPGRFSRKV-FVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 AL RPGR RK+ F + D RR I K+ L ++++ ++ N L GA +A Sbjct: 327 ALLRPGRLDRKIEFPYLRDRRERRLIFGTIASKMSLAPEADLDSLIIRN--DSLSGAVIA 384 Query: 536 NIVNEAALLA 565 I+ EA L A Sbjct: 385 AIMQEAGLRA 394
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 140 bits (353), Expect = 3e-33 Identities = 83/189 (43%), Positives = 112/189 (59%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RGVL+ GPPG GKT+LAKAVA F V SEFV+ ++G G VRD+F+ AKE +P Sbjct: 196 RGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSP 255 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SIIFIDE+DA+ R + E + L +LL +MDGFD V V+ ATNR LD Sbjct: 256 SIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDP 315 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PD +R + + ++ L +D ++ D VA + GAD+ + Sbjct: 316 ALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLE-DWVAR-PDKISGADINS 373 Query: 539 IVNEAALLA 565 I EA + A Sbjct: 374 ICQEAGMQA 382
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 140 bits (353), Expect = 3e-33 Identities = 85/189 (44%), Positives = 113/189 (59%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RGVL+ GPPG GKT+LAKAVA F V SEFV+ ++G G VRD+F+ AKE AP Sbjct: 200 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAP 259 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IIFIDE+DA+ R + E + L +LL +MDGFD +V V V+ ATNR LD Sbjct: 260 AIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDP 319 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PD +R I + K+ L E+ ++ D VA + GAD+ + Sbjct: 320 ALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE-DYVAR-PDKISGADINS 377 Query: 539 IVNEAALLA 565 I +LA Sbjct: 378 ICQARGMLA 386
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 139 bits (349), Expect = 7e-33 Identities = 80/190 (42%), Positives = 116/190 (61%), Gaps = 4/190 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GV++ GPPGTGKTLLA+AVA F VS SE V+ ++G G+ VR+LF A+E AP Sbjct: 191 KGVIMYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAP 250 Query: 188 SIIFIDELDAVGGSR---GRSFND-ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 SIIF+DE+D++G +R G+ D E +T+ +LL ++DGF+S + ++ ATNR LD Sbjct: 251 SIIFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILD 310 Query: 356 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 AL RPGR RK+ P+ R IL +H R++ L I +A++ G GA++ Sbjct: 311 PALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRG--INLRKIASMLGGASGAEIK 368 Query: 536 NIVNEAALLA 565 EA + A Sbjct: 369 ATCTEAGMFA 378
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 139 bits (349), Expect = 7e-33 Identities = 76/189 (40%), Positives = 116/189 (61%), Gaps = 4/189 (2%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 GVLL GPPGTGKTLLAKAVA E + F S+ E + M+VG A VR++F++A+ ++P Sbjct: 690 GVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPC 749 Query: 191 IIFIDELDAVGGSRGRSFN--DERDQTLNQLLTEMDGF--DSDVKVIVMAATNRPKALDS 358 +IF DELD++ RG S + + D+ ++QLL E+D D++ V V+ ATNRP LD Sbjct: 750 VIFFDELDSIAPHRGNSSDSGNVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDP 809 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 +L RPGRF + V++G+ E + + L K +++ + ++ N P GAD+ Sbjct: 810 SLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYA 869 Query: 539 IVNEAALLA 565 + ++A L A Sbjct: 870 LCSDAVLSA 878 Score = 38.9 bits (89), Expect = 0.010 Identities = 25/92 (27%), Positives = 45/92 (48%) Frame = +2 Query: 17 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 196 LL G P TGKT + VA P F++S+ EF + A++ + ++ +II Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADATADHLEAKLDMFVQNVVKSPCAII 485 Query: 197 FIDELDAVGGSRGRSFNDERDQTLNQLLTEMD 292 F+ +LD + S +++ LL+++D Sbjct: 486 FVKDLDVLSISSDEGNIVPGSKSIQILLSKID 517
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 139 bits (349), Expect = 7e-33 Identities = 82/191 (42%), Positives = 114/191 (59%), Gaps = 5/191 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAG-----EAGIPFFSVSASEFVEMFVGRGAARVRDLFKEA 172 RGVL GPPGTGKTL+A+A+A E I FF ++ + +VG ++R LF+EA Sbjct: 448 RGVLFHGPPGTGKTLMARALAASCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEA 507 Query: 173 KEAAPSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 K+ PSIIF DE+D + R ++ LL MDG D+ +VIV+ ATNRP A+ Sbjct: 508 KKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLALMDGMDNRGQVIVIGATNRPDAV 567 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R+ + +PD++ R KIL + RK + I D +A +T G GADL Sbjct: 568 DPALRRPGRFDREFYFPLPDVKARFKILQIQTRKWSSPLSTNFI-DKLAFLTKGYGGADL 626 Query: 533 ANIVNEAALLA 565 ++ EAAL++ Sbjct: 627 RSLCTEAALIS 637
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 137 bits (346), Expect = 2e-32 Identities = 77/161 (47%), Positives = 101/161 (62%), Gaps = 3/161 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RGVLL GPPGTGKT+LAKAVA F V SEFV+ ++G G VRD+F+ AKE AP Sbjct: 195 RGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAP 254 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IIFIDE+DA+ +R + E + L +LL +MDGFD V V V+ ATNR LD Sbjct: 255 AIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDP 314 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEI 481 AL RPGR RK+ +PD +R + V K+ L ++ ++ Sbjct: 315 ALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 355
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 137 bits (346), Expect = 2e-32 Identities = 76/194 (39%), Positives = 122/194 (62%), Gaps = 8/194 (4%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL+ GPPGTGKT+LAKAVA E G FF+VS++ + G VR LF+ A+ AP Sbjct: 268 KGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAP 327 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGF-------DSDVKVIVMAATNRP 343 S IFIDE+D++ RG E + + ++LL +MDG +S V+V+AATN P Sbjct: 328 STIFIDEIDSICSKRGTGSEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFP 387 Query: 344 KALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVG 523 +D AL R R +++++ +P+++GR ++L ++L++VPL +D ++ +A G G Sbjct: 388 WDIDEALRR--RLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDL--KSIAEKMDGYSG 443 Query: 524 ADLANIVNEAALLA 565 AD+ N+ +A+++A Sbjct: 444 ADITNVCRDASMMA 457
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 137 bits (345), Expect = 2e-32 Identities = 77/185 (41%), Positives = 108/185 (58%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+LL GPPGTGKTLLA +A E+ + F SV E + ++G VRD+F A+ A P Sbjct: 876 GILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPC 935 Query: 191 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 370 I+F DE +++ RG D+ +NQLLT++DG + V V+AAT+RP +D AL R Sbjct: 936 ILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLR 995 Query: 371 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 550 PGR + V+ PD R +IL V +PL +D ++ VA+VT GADL ++ Sbjct: 996 PGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDL--QHVASVTDSFTGADLKALLYN 1053 Query: 551 AALLA 565 A L A Sbjct: 1054 AQLEA 1058 Score = 38.5 bits (88), Expect = 0.014 Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 22/202 (10%) Frame = +2 Query: 14 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSAS-EFVEMFVGRGAARVRDL-------FKE 169 +LL G G+GK+ LAKA+ EA F + A E V+ RG R+ ++ F E Sbjct: 595 LLLTGGKGSGKSTLAKAICKEA---FDKLDAHVERVDCKALRG-KRLENIQKTLEVAFSE 650 Query: 170 AKEAAPSIIFIDELDAVGG-----SRGRSFNDERDQTLNQLLTEM-DGFDSDVKVIVMAA 331 A PS++ +D+LD + G S + + Q L L +M F S ++ + A Sbjct: 651 AVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEFISMGSLVALIA 710 Query: 332 TNRPKALDSALCRPGR----FSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL-- 493 T++ + L + F + P+ E R +IL ++ K L+ D DL Sbjct: 711 TSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILC-NVIKNKLDCDINKFTDLDL 769 Query: 494 --VANVTPGLVGADLANIVNEA 553 VA T G V D +V+ A Sbjct: 770 QHVAKETGGFVARDFTVLVDRA 791
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 137 bits (344), Expect = 3e-32 Identities = 78/189 (41%), Positives = 112/189 (59%), Gaps = 4/189 (2%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+L GPPGTGKTLLAKA+A + FFSV E + M++G A VR +F++A++A P Sbjct: 737 GILFYGPPGTGKTLLAKAIASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPC 796 Query: 191 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSA 361 +IF DELD+V RG + D+ ++QLL E+DG S V V+ ATNRP LD A Sbjct: 797 VIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSGGDGVFVIGATNRPDLLDEA 856 Query: 362 LCRPGRFSRKVFVGVPDLEGRR-KILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 L RPGRF + +++G+ D + ++ I+ RK LE +I+ D+ GAD Sbjct: 857 LLRPGRFDKMLYLGISDTDKKQANIIKALTRKFTLESGIDIL-DIAKKCPFNYTGADFYA 915 Query: 539 IVNEAALLA 565 + ++A L A Sbjct: 916 LCSDALLNA 924
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 137 bits (344), Expect = 3e-32 Identities = 83/189 (43%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPGTGKT+L KAVA F V+ SEFV+ ++G G VRD+F+ A+E AP Sbjct: 169 QGVLLYGPPGTGKTMLVKAVANHTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAP 228 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 SI+FIDE+D++ R S + E + L +LL +MDGFD V V+ ATNR +D Sbjct: 229 SIVFIDEVDSIATKRFDASTSADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDP 288 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PD +R + K+ L DS I LV + AD+ + Sbjct: 289 ALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSL-NDSVDIESLVCR-PEKISCADINS 346 Query: 539 IVNEAALLA 565 I EA +LA Sbjct: 347 ICQEAGMLA 355
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 137 bits (344), Expect = 3e-32 Identities = 75/184 (40%), Positives = 118/184 (64%), Gaps = 1/184 (0%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+LL GPPGTGK+ LAKAVA EAG FFS+S+S+ V ++G VR LF+ A+E PS Sbjct: 164 GILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPS 223 Query: 191 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSALC 367 IIFIDE+D++ GSR ++ + + L +M+G D V+V+ ATN P LDSA+ Sbjct: 224 IIFIDEIDSLCGSRSEGESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIR 283 Query: 368 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 547 R RF +++++ +P+ R ++ +++ K+P E S+ +L A +T G G+D++ +V Sbjct: 284 R--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKEL-AKMTDGYSGSDISIVVR 340 Query: 548 EAAL 559 +A + Sbjct: 341 DAIM 344
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 136 bits (343), Expect = 4e-32 Identities = 82/193 (42%), Positives = 114/193 (59%), Gaps = 8/193 (4%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+L GPPGTGKTLLAKA+A E + FFSV E + M++G A VR +F+ A++A P Sbjct: 1065 GILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPC 1124 Query: 191 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVK----VIVMAATNRPKAL 352 ++F DELD+V RG + D+ ++QLL E+DG + + V V+ ATNRP L Sbjct: 1125 VVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIGATNRPDLL 1184 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRR-KILAVHLRKVPLEEDSEIICDLVANVTP-GLVGA 526 D+AL RPGRF + +++GV D ++ IL RK L D + D VA P GA Sbjct: 1185 DTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALHPD--VSLDRVAEQLPLTYTGA 1242 Query: 527 DLANIVNEAALLA 565 DL + ++A L A Sbjct: 1243 DLYALCSDAMLKA 1255
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 136 bits (343), Expect = 4e-32 Identities = 82/192 (42%), Positives = 112/192 (58%), Gaps = 7/192 (3%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+L GPPGTGKTLLAKA+A + FFSV E + M++G A VR +F+ A++A P Sbjct: 854 GILFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRKVFQRARDAKPC 913 Query: 191 IIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGF---DSDVKVIVMAATNRPKALD 355 ++F DELD+V RG + E D+ ++QLL E+DG D V V+ ATNRP LD Sbjct: 914 VVFFDELDSVAPKRGNQGDSEGVMDRIVSQLLAELDGMSGGDGGDGVFVVGATNRPDLLD 973 Query: 356 SALCRPGRFSRKVFVGVPDL-EGRRKILAVHLRKVPLEEDSEIICDLVANVTP-GLVGAD 529 AL RPGRF + +++GV D E + KI+ RK L ++ D VA P GAD Sbjct: 974 EALLRPGRFDKMLYLGVSDTHEKQSKIMEALSRKFHLHPSVDL--DKVAESCPFTFTGAD 1031 Query: 530 LANIVNEAALLA 565 + ++A L A Sbjct: 1032 FYALCSDAMLNA 1043
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 136 bits (343), Expect = 4e-32 Identities = 85/190 (44%), Positives = 107/190 (56%), Gaps = 4/190 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RGVLL GPPGTGKT+L KAVA F V SEFV+ ++G G VRD+F+ A+E AP Sbjct: 169 RGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAP 228 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IIFIDE+DA+ R + E + L +LLT+MDGFD V V+ ATNR LD Sbjct: 229 AIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDP 288 Query: 359 ALCRPGRFSRKV-FVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 AL RPGR RK+ F D RR + K+ L E+ D GA +A Sbjct: 289 ALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLL--SPEVDLDTFIMRPDASSGAQIA 346 Query: 536 NIVNEAALLA 565 I+ +A LLA Sbjct: 347 AIMQDAGLLA 356
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 136 bits (343), Expect = 4e-32 Identities = 84/190 (44%), Positives = 112/190 (58%), Gaps = 4/190 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RGVLL GPPGTGKT+L KAVA F V+ SEFV+ ++G G VRD+F+ A+E +P Sbjct: 201 RGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSP 260 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IIFIDE+DA+ R + E + L +LL +MDGF+ V V+ ATNR LD Sbjct: 261 AIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFEQSSNVKVIMATNRADTLDP 320 Query: 359 ALCRPGRFSRKV-FVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 AL RPGR RK+ F + D RR I + K+ L + ++ +V N L GA +A Sbjct: 321 ALLRPGRLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVRN--EPLSGAVIA 378 Query: 536 NIVNEAALLA 565 I+ EA L A Sbjct: 379 AIMQEAGLRA 388
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 135 bits (340), Expect = 8e-32 Identities = 80/194 (41%), Positives = 120/194 (61%), Gaps = 8/194 (4%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL+ GPPGTGKT+LAKAVA E G FF+VS+S + G VR LF+ A+ AP Sbjct: 240 KGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAP 299 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGF-------DSDVKVIVMAATNRP 343 + IFIDE+D++ RG S E + + ++LL +MDG D V+V+AATN P Sbjct: 300 TTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFP 359 Query: 344 KALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVG 523 +D AL R R +++++ +P +GR ++L + LR+V L+ D + + +A+ T G G Sbjct: 360 WDIDEALRR--RLEKRIYIPLPTAKGRAELLKISLREVELDPDVHL--EDIADKTEGYSG 415 Query: 524 ADLANIVNEAALLA 565 AD+ NI +A+L+A Sbjct: 416 ADITNICRDASLMA 429
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 135 bits (340), Expect = 8e-32 Identities = 77/189 (40%), Positives = 112/189 (59%), Gaps = 4/189 (2%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+L GPPGTGKTLLAKA+A + FFSV E + M++G A VR +F++A++A P Sbjct: 753 GILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPC 812 Query: 191 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSA 361 +IF DE+D+V RG + D+ ++QLL E+DG SD V ++ ATNRP LD A Sbjct: 813 VIFFDEVDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSDGDGVFIIGATNRPDLLDEA 872 Query: 362 LCRPGRFSRKVFVGVPDL-EGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 L RPGRF + +++G+ D E + I+ RK + D +LV++ GAD Sbjct: 873 LLRPGRFDKLIYLGIADTREKQANIMRALTRKFKVSSDIN-FDELVSDFPFSYTGADFYA 931 Query: 539 IVNEAALLA 565 + ++A L A Sbjct: 932 LCSDAMLKA 940
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 135 bits (339), Expect = 1e-31 Identities = 81/194 (41%), Positives = 119/194 (61%), Gaps = 8/194 (4%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL+ GPPGTGKT+LAKAVA E G FF+VS+S + G VR LF+ A+ AP Sbjct: 240 KGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAP 299 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGF-------DSDVKVIVMAATNRP 343 + IFIDE+D++ RG S E + + ++LL +MDG D V+V+AATN P Sbjct: 300 TTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFP 359 Query: 344 KALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVG 523 +D AL R R +++++ +P +GR ++L + LR+V L D +I + +A T G G Sbjct: 360 WDIDEALRR--RLEKRIYIPLPTAKGRAELLKISLREVEL--DPDIHLEDIAEKTEGYSG 415 Query: 524 ADLANIVNEAALLA 565 AD+ NI +A+L+A Sbjct: 416 ADITNICRDASLMA 429
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 134 bits (338), Expect = 1e-31 Identities = 79/186 (42%), Positives = 116/186 (62%), Gaps = 1/186 (0%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 T G+LL GPPGTGK+ LAKAVA EA FFSVS+S+ V ++G V+ LF A+E Sbjct: 166 TSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENK 225 Query: 185 PSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSA 361 PSIIFIDE+DA+ G+RG ++ + +LL +M+G +D + V+V+ ATN P LDSA Sbjct: 226 PSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSA 285 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 + R RF R++++ +PDL R + +++ P E L A +T G G+D+A + Sbjct: 286 IRR--RFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGA-MTEGYSGSDIAVV 342 Query: 542 VNEAAL 559 V +A + Sbjct: 343 VKDALM 348
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 134 bits (337), Expect = 2e-31 Identities = 80/189 (42%), Positives = 111/189 (58%), Gaps = 4/189 (2%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+L GPPGTGKTLLAKAVA + FFSV E + M++G A VR +F+ A++A P Sbjct: 758 GILFYGPPGTGKTLLAKAVATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPC 817 Query: 191 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSA 361 +IF DELD+V RG + D+ ++QLL E+DG + + V+ ATNRP LD A Sbjct: 818 VIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEA 877 Query: 362 LCRPGRFSRKVFVGVPDL-EGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 L RPGRF + +++G+ D E + IL RK L+ D + DL A+ GAD Sbjct: 878 LLRPGRFDKLLYLGISDTNEKQANILRALTRKFTLDPDVS-LDDLAASCPFTYTGADFYA 936 Query: 539 IVNEAALLA 565 + ++A L A Sbjct: 937 LCSDAMLNA 945
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 134 bits (336), Expect = 2e-31 Identities = 82/189 (43%), Positives = 110/189 (58%), Gaps = 3/189 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RGVL+ GPPG GKT+LA AVA F V SEFV+ ++G G VRD+F+ AKE +P Sbjct: 197 RGVLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSP 256 Query: 188 SIIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +IIFIDE+DA+ R + E + L +LL +MDGFD V V+ ATNR LD Sbjct: 257 AIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDP 316 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 AL RPGR RK+ +PD +R I + K+ L E+ ++ + VA + GAD+ Sbjct: 317 ALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLE-EFVAR-PDRVSGADINA 374 Query: 539 IVNEAALLA 565 I EA + A Sbjct: 375 ICQEAGMNA 383
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 134 bits (336), Expect = 2e-31 Identities = 78/194 (40%), Positives = 120/194 (61%), Gaps = 8/194 (4%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL+ GPPGTGKT+LAKAVA E G FF+VS+S + G VR LF+ A+ AP Sbjct: 242 KGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAP 301 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGF-------DSDVKVIVMAATNRP 343 + IFIDE+D++ RG S E + + ++LL +MDG D V+V+AATN P Sbjct: 302 TTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFP 361 Query: 344 KALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVG 523 +D AL R R +++++ +P +GR ++L ++LR+V L+ D ++ + +A G G Sbjct: 362 WDIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQL--EDIAEKIEGYSG 417 Query: 524 ADLANIVNEAALLA 565 AD+ N+ +A+L+A Sbjct: 418 ADITNVCRDASLMA 431
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 133 bits (335), Expect = 3e-31 Identities = 76/190 (40%), Positives = 109/190 (57%), Gaps = 5/190 (2%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 GVLL GPPG GKTLLAKAVA E+ F S+ E + +VG +R +F A+ + P Sbjct: 569 GVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPC 628 Query: 191 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 370 +IF DELDA+ R S ++ + +N LLTE+DG + + V+ ATNRP +D A+ R Sbjct: 629 VIFFDELDALVPRRDTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLR 688 Query: 371 PGRFSRKVFVGVPDLEGRRKILAVHLRK--VPLEED---SEIICDLVANVTPGLVGADLA 535 PGR + +F+ +P+ E + I+ + PL D EII + N GADLA Sbjct: 689 PGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCN---NFSGADLA 745 Query: 536 NIVNEAALLA 565 +V E+++LA Sbjct: 746 ALVRESSVLA 755 Score = 132 bits (332), Expect = 7e-31 Identities = 82/193 (42%), Positives = 112/193 (58%), Gaps = 7/193 (3%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RGVLL GPPG GKT +A A+AGE +PF S+SA V G ++RDLF EA+ AP Sbjct: 240 RGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAP 299 Query: 188 SIIFIDELDAVGGSR-GRSFNDERDQTLNQLLTEMDGFDSD----VKVIVMAATNRPKAL 352 ++F DE+DA+ R G + + + + QLLT MD + VI++ ATNRP +L Sbjct: 300 CLVFFDEIDAITPKRDGGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSL 359 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVP--LEEDSEIICDLVANVTPGLVGA 526 D+AL R GRF R++ + VP+ R I L+K+ L+ D I +A +TPG VGA Sbjct: 360 DAALRRAGRFDREICLNVPNEVSRLHI----LKKMSDNLKIDGAIDFAKLAKLTPGFVGA 415 Query: 527 DLANIVNEAALLA 565 DL +V A A Sbjct: 416 DLKALVTAAGTCA 428
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 133 bits (334), Expect = 4e-31 Identities = 81/193 (41%), Positives = 111/193 (57%), Gaps = 8/193 (4%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+L GPPGTGKTLLAKA+A E + FFSV E + M++G A VR +F+ A++A P Sbjct: 1029 GILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPC 1088 Query: 191 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGF----DSDVKVIVMAATNRPKAL 352 ++F DELD+V RG + D+ ++QLL E+DG D+ V V+ ATNRP L Sbjct: 1089 VVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLL 1148 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRR-KILAVHLRKVPLEEDSEIICDLVANVTP-GLVGA 526 D AL RPGRF + +++GV D ++ KIL RK L + VA P GA Sbjct: 1149 DPALLRPGRFDKMLYLGVSDTHDKQLKILEALTRKFTLH--PSVSLHSVAQQLPFTYTGA 1206 Query: 527 DLANIVNEAALLA 565 D + ++A L A Sbjct: 1207 DFYALCSDAMLKA 1219
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 133 bits (334), Expect = 4e-31 Identities = 74/185 (40%), Positives = 103/185 (55%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+LL G PG GKTLLA AVA + G+ F S+ E + ++G VR+LF+ A+ A P Sbjct: 835 GILLYGYPGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERAQAAKPC 894 Query: 191 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 370 I+F DE D++ RG D+ +NQ+LT+MDG + V V+AAT+RP +DSAL R Sbjct: 895 ILFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLR 954 Query: 371 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 550 PGR + V +PD + R IL R + + + + VA G GADL + Sbjct: 955 PGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNL--SSVAGECSGFSGADLQALAYN 1012 Query: 551 AALLA 565 A L A Sbjct: 1013 AYLKA 1017 Score = 42.0 bits (97), Expect = 0.001 Identities = 37/185 (20%), Positives = 81/185 (43%), Gaps = 4/185 (2%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAG---EAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 G LL G G+GK+L+ VA G ++ + + D+F E Sbjct: 518 GSLLFGTSGSGKSLVISQVAQIVTNKGHFVKLLNCDKIMSESYNNLRGIFEDIFSEVSWK 577 Query: 182 APSIIFIDELDA-VGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 APS++ +++LD+ + + S + + Q ++++ + + ++A++ ++L+S Sbjct: 578 APSLLILEDLDSLIPAEQEHSDSSQSRQLSEYFISKLSAQTINRDITILASSKSKESLNS 637 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 + + PD E R++IL +L + + + + +A T G + DL Sbjct: 638 LIFTTHLIEHDFQLRAPDKEARKQILQSYLDTLNVFCSEGELLNNIAVETEGYLPKDLKV 697 Query: 539 IVNEA 553 + + A Sbjct: 698 LCDRA 702
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 132 bits (333), Expect = 5e-31 Identities = 76/193 (39%), Positives = 113/193 (58%), Gaps = 8/193 (4%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+L GPPGTGKTLLAKA+A + FFSV E + M++G A VR +F++A++A P Sbjct: 874 GILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPC 933 Query: 191 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVK-----VIVMAATNRPKA 349 +IF DELD+V RG + D+ ++QLL E+DG + V V+ ATNRP Sbjct: 934 VIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGAEGGGDGVFVVGATNRPDL 993 Query: 350 LDSALCRPGRFSRKVFVGVPDL-EGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGA 526 LD AL RPGRF + +++G+ D E + KIL RK L ++ ++ ++ + GA Sbjct: 994 LDEALLRPGRFDKMLYLGISDTDEKQSKILEALTRKFKLADNVDLY-EIAKRCSFTFTGA 1052 Query: 527 DLANIVNEAALLA 565 D + +++ L A Sbjct: 1053 DFYALCSDSMLNA 1065
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 132 bits (333), Expect = 5e-31 Identities = 75/192 (39%), Positives = 106/192 (55%), Gaps = 9/192 (4%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+LL G PG GKTLLA AVA + G+ F SV E + F+G +R+LF+ A+ P Sbjct: 733 GILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPC 792 Query: 191 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 370 I+F DE D++ RG D+ +NQLLT+MDG + V ++AAT+RP +DSAL R Sbjct: 793 ILFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLR 852 Query: 371 PGRFSRKVFVGVPDLEGRRKILAVHL---------RKVPLEEDSEIICDLVANVTPGLVG 523 PGR + V +P R IL + +K LE+++++ L+A T G G Sbjct: 853 PGRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADL--KLIAEKTAGFSG 910 Query: 524 ADLANIVNEAAL 559 ADL + A L Sbjct: 911 ADLQGLCYNAYL 922
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 132 bits (332), Expect = 7e-31 Identities = 77/194 (39%), Positives = 117/194 (60%), Gaps = 8/194 (4%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL+ GPPGTGKTLLAKAVA E FF++S+S + G VR LF+ A+ AP Sbjct: 240 KGVLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAP 299 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLN-QLLTEMDGF-------DSDVKVIVMAATNRP 343 + IFIDE+D++ RG S E + + +LL +MDG D V+V+AATN P Sbjct: 300 TTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFP 359 Query: 344 KALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVG 523 +D AL R R +++++ +P +GR ++L ++L+++ L +D I C +A G G Sbjct: 360 WDIDEALRR--RLEKRIYIPLPSAKGREELLRINLKELELADDVNIEC--IAENMDGYSG 415 Query: 524 ADLANIVNEAALLA 565 AD+ N+ +A+L+A Sbjct: 416 ADITNVCRDASLMA 429
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 131 bits (330), Expect = 1e-30 Identities = 79/189 (41%), Positives = 119/189 (62%), Gaps = 5/189 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 + ++LAGPPGTGKTL+A+A+A E+ FF+VS+++ + G VR LF+ A+ AP Sbjct: 227 KAMVLAGPPGTGKTLIARAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAP 286 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDG----FDSDVKVIVMAATNRPKAL 352 SIIFIDE+D +GG RG S E + + ++ L +MDG FDS +V V+AATN P L Sbjct: 287 SIIFIDEIDTLGGQRGNSGEHEASRRVKSEFLVQMDGSQNKFDSR-RVFVLAATNIPWEL 345 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL R RF +++F+ +PD++ R+K++ + P + EI D +A T G GAD+ Sbjct: 346 DEALRR--RFEKRIFIPLPDIDARKKLIEKSMEGTP--KSDEINYDDLAARTEGFSGADV 401 Query: 533 ANIVNEAAL 559 ++ AA+ Sbjct: 402 VSLCRTAAI 410
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 131 bits (330), Expect = 1e-30 Identities = 79/192 (41%), Positives = 111/192 (57%), Gaps = 7/192 (3%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+L GPPGTGKTLLAKA+A + FFSV E + M++G A VR +F++A++A P Sbjct: 848 GILFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPC 907 Query: 191 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGF---DSDVKVIVMAATNRPKALD 355 +IF DELD+V RG + D+ ++QLL E+DG + V V+ ATNRP LD Sbjct: 908 VIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGAEGGDGVFVVGATNRPDLLD 967 Query: 356 SALCRPGRFSRKVFVGVPDL-EGRRKILAVHLRKVPLEEDSEIICDLVANVTP-GLVGAD 529 AL RPGRF + +++G+ D E + KI+ RK L D + +A P GAD Sbjct: 968 EALLRPGRFDKMLYLGIADTHEKQAKIIQALTRKFQL--DPSVDLGRIAETCPFTYTGAD 1025 Query: 530 LANIVNEAALLA 565 + ++A L A Sbjct: 1026 FYALCSDAMLNA 1037
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 129 bits (324), Expect = 6e-30 Identities = 80/186 (43%), Positives = 110/186 (59%), Gaps = 2/186 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG+LL GPPG GKT+LAKAVA E+ FF++SA+ +VG G VR LF A+E P Sbjct: 374 RGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQP 433 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDS--DVKVIVMAATNRPKALDSA 361 SIIFIDE+D++ R +D + + L E DG S D +V+VM ATNRP+ LD A Sbjct: 434 SIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEA 493 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 + R RF ++V+V +P+ E R +L L K + + L A +T G G+DL + Sbjct: 494 VLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQL-ARMTDGYSGSDLTAL 550 Query: 542 VNEAAL 559 +AAL Sbjct: 551 AKDAAL 556
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 129 bits (324), Expect = 6e-30 Identities = 80/186 (43%), Positives = 110/186 (59%), Gaps = 2/186 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG+LL GPPG GKT+LAKAVA E+ FF++SA+ +VG G VR LF A+E P Sbjct: 376 RGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQP 435 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDS--DVKVIVMAATNRPKALDSA 361 SIIFIDE+D++ R +D + + L E DG S D +V+VM ATNRP+ LD A Sbjct: 436 SIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEA 495 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 + R RF ++V+V +P+ E R +L L K + + L A +T G G+DL + Sbjct: 496 VLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQL-ARMTDGYSGSDLTAL 552 Query: 542 VNEAAL 559 +AAL Sbjct: 553 AKDAAL 558
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 129 bits (323), Expect = 8e-30 Identities = 76/194 (39%), Positives = 116/194 (59%), Gaps = 8/194 (4%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL+ GPPGTGKTLLAKAVA E FF+VS+S + G VR LF+ A+ +P Sbjct: 243 KGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSP 302 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLN-QLLTEMDGF-------DSDVKVIVMAATNRP 343 + IFIDE+D++ RG S E + + +LL +MDG D V+V+AATN P Sbjct: 303 ATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFP 362 Query: 344 KALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVG 523 +D AL R R +++++ +P +GR ++L + LR++ L +D ++ +A G G Sbjct: 363 WDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVDLAS--IAENMEGYSG 418 Query: 524 ADLANIVNEAALLA 565 AD+ N+ +A+L+A Sbjct: 419 ADITNVCRDASLMA 432
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 129 bits (323), Expect = 8e-30 Identities = 76/191 (39%), Positives = 112/191 (58%), Gaps = 6/191 (3%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+L GPPGTGKTLLAKA+A + FFSV E + M++G A VR +F++A++A P Sbjct: 754 GILFYGPPGTGKTLLAKAIATTFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPC 813 Query: 191 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDS--DVKVIVMAATNRPKALDS 358 ++F DELD+V RG + D+ ++QLL E+DG + V V+ ATNRP LD Sbjct: 814 VVFFDELDSVAPQRGNQGDSGGVMDRIVSQLLAELDGMSTAGGEGVFVVGATNRPDLLDE 873 Query: 359 ALCRPGRFSRKVFVGVPDL-EGRRKILAVHLRKVPLEEDSEIICDLVANVTP-GLVGADL 532 AL RPGRF + +++G+ D E ++ I+ RK L D + + ++ P GAD Sbjct: 874 ALLRPGRFDKMLYLGISDTHEKQQTIMEALTRKFRLAAD--VSLEAISKRCPFTFTGADF 931 Query: 533 ANIVNEAALLA 565 + ++A L A Sbjct: 932 YALCSDAMLNA 942
>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 381 Score = 128 bits (322), Expect = 1e-29 Identities = 69/120 (57%), Positives = 87/120 (72%), Gaps = 3/120 (2%) Frame = +2 Query: 218 VGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRPGRFSR 388 +G RG +DER+QTLNQ+L EMDGF + VIV+AATNRP LD AL RPGRF R Sbjct: 1 MGRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDR 60 Query: 389 KVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAA 568 +V VG+PD++GR +IL VH+RKV + +D + + +A TPG GADLAN+VNEAAL AA Sbjct: 61 QVVVGLPDVKGREQILKVHMRKVSVAQDVDAM--TLARGTPGYSGADLANLVNEAALFAA 118
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 128 bits (322), Expect = 1e-29 Identities = 76/194 (39%), Positives = 115/194 (59%), Gaps = 8/194 (4%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL+ GPPGTGKTLLAKAVA E FF+VS+S + G VR LF+ A+ +P Sbjct: 243 KGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSP 302 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLN-QLLTEMDGF-------DSDVKVIVMAATNRP 343 + IFIDE+D++ RG S E + + +LL +MDG D V+V+AATN P Sbjct: 303 ATIFIDEIDSICSRRGTSEEHEASRRMKAELLVQMDGVGGASENDDPSKMVMVLAATNFP 362 Query: 344 KALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVG 523 +D AL R R +++++ +P +GR ++L + LR++ L +D + +A G G Sbjct: 363 WDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLAS--IAENMEGYSG 418 Query: 524 ADLANIVNEAALLA 565 AD+ N+ +A+L+A Sbjct: 419 ADITNVCRDASLMA 432
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 128 bits (321), Expect = 1e-29 Identities = 76/194 (39%), Positives = 115/194 (59%), Gaps = 8/194 (4%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL+ GPPGTGKTLLAKAVA E FF+VS+S + G VR LF+ A+ +P Sbjct: 243 KGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSP 302 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLN-QLLTEMDGF-------DSDVKVIVMAATNRP 343 + IFIDE+D++ RG S E + + +LL +MDG D V+V+AATN P Sbjct: 303 ATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFP 362 Query: 344 KALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVG 523 +D AL R R +++++ +P +GR ++L + LR++ L +D + +A G G Sbjct: 363 WDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLAS--IAENMEGYSG 418 Query: 524 ADLANIVNEAALLA 565 AD+ N+ +A+L+A Sbjct: 419 ADITNVCRDASLMA 432
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 128 bits (321), Expect = 1e-29 Identities = 78/193 (40%), Positives = 115/193 (59%), Gaps = 9/193 (4%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVL+ GPPGTGKTLLAKAVA E G FF+VS++ + G VR LF A+ AP Sbjct: 273 KGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAP 332 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGFDSDVK--------VIVMAATNR 340 S IFIDE+D++ SRG S E + + ++LL ++DG + V+V+AATN Sbjct: 333 STIFIDEIDSLCNSRGGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNF 392 Query: 341 PKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLV 520 P +D AL R R +++++ +PD E R+ ++ ++LR V + D I + VA T G Sbjct: 393 PWDIDEALRR--RLEKRIYIPLPDFESRKALININLRTVEVASDVNI--EDVARRTEGYS 448 Query: 521 GADLANIVNEAAL 559 G DL N+ +A++ Sbjct: 449 GDDLTNVCRDASM 461
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 127 bits (320), Expect = 2e-29 Identities = 77/199 (38%), Positives = 118/199 (59%), Gaps = 15/199 (7%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG+LL GPPGTGKT++AKAVA E+ FFSVSAS + ++G VR LF AK+ +P Sbjct: 505 RGMLLFGPPGTGKTMIAKAVATESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSP 564 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDS------------DVKVIVMAA 331 SIIFIDE+D++ +R + N+ + +LL + S D +V+V+ A Sbjct: 565 SIIFIDEIDSMLTARSDNENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGA 624 Query: 332 TNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDS---EIICDLVAN 502 TN P A+D A R RFSRK+++ +PD E R HL+++ ++ + ++ +L+ Sbjct: 625 TNLPWAIDDAARR--RFSRKLYIPLPDYETR----LYHLKRLMAKQKNSLQDLDYELITE 678 Query: 503 VTPGLVGADLANIVNEAAL 559 +T G G+DL ++ EAA+ Sbjct: 679 MTEGFSGSDLTSLAKEAAM 697
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 126 bits (317), Expect = 4e-29 Identities = 74/190 (38%), Positives = 104/190 (54%), Gaps = 5/190 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAG-----IPFFSVSASEFVEMFVGRGAARVRDLFKEA 172 +GV+ GPPGTGKTL+A+A+A E + FF ++ + +VG ++R LF +A Sbjct: 426 KGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQA 485 Query: 173 KEAAPSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 PSIIF DE+D + R + ++ LL MDG D +V+V+ ATNR L Sbjct: 486 YAMRPSIIFFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTL 545 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R++ +PDL RR+IL +H K + D +A T G GADL Sbjct: 546 DPALRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADL 605 Query: 533 ANIVNEAALL 562 + EA L+ Sbjct: 606 KFLCTEAVLI 615
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 126 bits (317), Expect = 4e-29 Identities = 75/191 (39%), Positives = 107/191 (56%), Gaps = 5/191 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAG-----IPFFSVSASEFVEMFVGRGAARVRDLFKEA 172 RG L GPPGTGKTL+A+A+A E + FF ++ + +VG ++R LF +A Sbjct: 292 RGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQA 351 Query: 173 KEAAPSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 + PSIIF DE+D + R + ++ LL MDG DS +++V+ ATNR A+ Sbjct: 352 YQMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDAI 411 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R+ +PD E R++IL +H R + + +L N G GAD+ Sbjct: 412 DPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCV-GYRGADI 470 Query: 533 ANIVNEAALLA 565 +I EAAL A Sbjct: 471 KSICAEAALCA 481
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 126 bits (317), Expect = 4e-29 Identities = 69/185 (37%), Positives = 112/185 (60%), Gaps = 1/185 (0%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 R VL G PGTGKT+LAK++A E +P + + A+ + VG GA ++ +L++ A + AP Sbjct: 158 RNVLFHGSPGTGKTMLAKSLANELRVPLYLIKATSLIGEHVGDGARQIHELYELASKTAP 217 Query: 188 SIIFIDELDAVG-GSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 364 S+IFIDE+DA+G R +S + + +N LLTEMDG + + V+ + ATN P+ LD+A+ Sbjct: 218 SVIFIDEMDAIGLDRRFQSLRGDVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDNAI 277 Query: 365 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 544 RF ++ +P + RR +L ++ +PL+ D + D + +T G+ G D+ V Sbjct: 278 --RSRFEEEIEFKLPGDDERRMMLEKYIETMPLDVDFSV--DKLVKLTKGMSGRDIKERV 333 Query: 545 NEAAL 559 + AL Sbjct: 334 LKTAL 338
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 126 bits (316), Expect = 5e-29 Identities = 74/191 (38%), Positives = 107/191 (56%), Gaps = 5/191 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAG-----IPFFSVSASEFVEMFVGRGAARVRDLFKEA 172 RG L GPPGTGKTL+A+A+A E + FF ++ + +VG ++R LF +A Sbjct: 461 RGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQA 520 Query: 173 KEAAPSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 + PSIIF DE+D + R + ++ LL MDG DS +++V+ ATNR ++ Sbjct: 521 YQMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSI 580 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R+ +PD E R++IL +H R + + +L N G GAD+ Sbjct: 581 DPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCV-GYCGADI 639 Query: 533 ANIVNEAALLA 565 +I EAAL A Sbjct: 640 KSICAEAALCA 650
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 126 bits (316), Expect = 5e-29 Identities = 72/191 (37%), Positives = 106/191 (55%), Gaps = 6/191 (3%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G+L GPPGTGKTLLAKA+A E + FFSV E + M++G A VR +F+ A++A P Sbjct: 1026 GILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPC 1085 Query: 191 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDV----KVIVMAATNRPKAL 352 ++F DELD+V RG + D+ ++QLL E+DG V V+ ATNRP L Sbjct: 1086 VVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLL 1145 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF + +++GV D ++ + L + + + + + GAD Sbjct: 1146 DPALLRPGRFDKMLYLGVSDTHDKQVTIMEALTRKFTLHPTVSLRSVAERLPFTYTGADF 1205 Query: 533 ANIVNEAALLA 565 + ++A L A Sbjct: 1206 YALCSDAMLKA 1216
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 124 bits (312), Expect = 1e-28 Identities = 69/185 (37%), Positives = 112/185 (60%), Gaps = 1/185 (0%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 R VL G PGTGKT+LAK++A E +P + + A+ + VG GA ++ +L++ A + AP Sbjct: 158 RNVLFHGSPGTGKTMLAKSLANELKVPLYLIKATSLIGEHVGDGARQIHELYELASKTAP 217 Query: 188 SIIFIDELDAVG-GSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 364 S+IFIDE+DA+G R +S + + +N LLTEMDG + + V+ + ATN P+ LD A+ Sbjct: 218 SVIFIDEMDAIGLDRRYQSLRGDVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDKAI 277 Query: 365 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 544 RF ++ +PD E R+ +L ++ +PL+ D + D + +T + G D+ + V Sbjct: 278 --RSRFEEEIEFKLPDDEERKLMLEKYIETMPLKVDFPV--DKLVKLTREMSGRDIKDRV 333 Query: 545 NEAAL 559 + AL Sbjct: 334 LKTAL 338
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 122 bits (305), Expect = 9e-28 Identities = 71/191 (37%), Positives = 107/191 (56%), Gaps = 5/191 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAG-----IPFFSVSASEFVEMFVGRGAARVRDLFKEA 172 RG L GPPGTGKTL+A+A+A E + FF ++ + +VG ++R LF +A Sbjct: 116 RGCLFYGPPGTGKTLVARALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQA 175 Query: 173 KEAAPSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 352 + P+IIF DE+D + R + ++ LL MDG DS +++V+ ATNR ++ Sbjct: 176 YQMRPAIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSI 235 Query: 353 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 532 D AL RPGRF R+ +PD R++IL +H R + ++ + +A G GAD+ Sbjct: 236 DPALRRPGRFDREFLFSLPDKNARKEILKIHTRDWN-PKPVDMFLEELAEHCVGYCGADI 294 Query: 533 ANIVNEAALLA 565 +I EAAL A Sbjct: 295 KSICAEAALCA 305
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 119 bits (299), Expect = 5e-27 Identities = 65/153 (42%), Positives = 96/153 (62%), Gaps = 1/153 (0%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 + VL GPPGTGKTL+A+A+A E F V A E + VG + +R+L++ A E+AP Sbjct: 155 KNVLFYGPPGTGKTLMARALATETNSSFILVKAPELIGEHVGDASKMIRELYQRASESAP 214 Query: 188 SIIFIDELDAVGGSRG-RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 364 I+FIDELDA+G SR +S + + +N LLTE+DG + V+ +AATN P LD A+ Sbjct: 215 CIVFIDELDAIGLSREYQSLRGDVSEVVNALLTELDGIKENEGVVTIAATNNPAMLDPAI 274 Query: 365 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPL 463 RF ++ +P+ E R KI+ ++ +K+PL Sbjct: 275 --RSRFEEEIEFKLPNDEERLKIMELYAKKMPL 305
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 119 bits (299), Expect = 5e-27 Identities = 72/186 (38%), Positives = 115/186 (61%), Gaps = 2/186 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAG-IPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 RG+LL GPPGTGK+ LAKAVA EA FFSVS+S+ + ++G V++LF+ A++ Sbjct: 161 RGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHK 220 Query: 185 PSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGF-DSDVKVIVMAATNRPKALDSA 361 PSIIFIDE+D++ GSR + ++ + + L +M G +++ +V+ ATN P LDSA Sbjct: 221 PSIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSA 280 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 + R RF +++++ +P+ R ++ +HL P I +L A T G GAD++ I Sbjct: 281 IRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHEL-ARKTEGYSGADISII 337 Query: 542 VNEAAL 559 V ++ + Sbjct: 338 VRDSLM 343
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 119 bits (299), Expect = 5e-27 Identities = 72/186 (38%), Positives = 115/186 (61%), Gaps = 2/186 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAG-IPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 RG+LL GPPGTGK+ LAKAVA EA FFSVS+S+ + ++G V++LF+ A++ Sbjct: 161 RGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHK 220 Query: 185 PSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGF-DSDVKVIVMAATNRPKALDSA 361 PSIIFIDE+D++ GSR + ++ + + L +M G +++ +V+ ATN P LDSA Sbjct: 221 PSIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSA 280 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 + R RF +++++ +P+ R ++ +HL P I +L A T G GAD++ I Sbjct: 281 IRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHEL-ARKTEGYSGADISII 337 Query: 542 VNEAAL 559 V ++ + Sbjct: 338 VRDSLM 343
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 119 bits (299), Expect = 5e-27 Identities = 72/186 (38%), Positives = 111/186 (59%), Gaps = 2/186 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAG-IPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 RG+LL GPPGTGK+ LAKAVA EA FFS+S+S+ V ++G V++LF+ A+E Sbjct: 168 RGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENK 227 Query: 185 PSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSA 361 PSIIFIDE+D++ GSR + ++ + + L +M G D ++V+ ATN P LDSA Sbjct: 228 PSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSA 287 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 + R RF +++++ +P+ R + +HL +E + T G GAD++ I Sbjct: 288 IRR--RFEKRIYIPLPEAHARAAMFRLHLGSTQ-NSLTEADFQELGRKTDGYSGADISII 344 Query: 542 VNEAAL 559 V +A + Sbjct: 345 VRDALM 350
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 118 bits (295), Expect = 1e-26 Identities = 73/188 (38%), Positives = 113/188 (60%), Gaps = 4/188 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAG-IPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 RG+LL GPPGTGK+ LAKAVA EA FFS+S+S+ V ++G V++LF+ A+E Sbjct: 168 RGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENK 227 Query: 185 PSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSA 361 PSIIFIDE+D++ GSR + ++ + + L +M G D ++V+ ATN P LDSA Sbjct: 228 PSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSA 287 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL--VANVTPGLVGADLA 535 + R RF +++++ +P+ R + +HL ++S D + T G GAD++ Sbjct: 288 IRR--RFEKRIYIPLPEPHARAAMFKLHLGTT---QNSLTEADFRELGRKTDGYSGADIS 342 Query: 536 NIVNEAAL 559 IV +A + Sbjct: 343 IIVRDALM 350
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 117 bits (294), Expect = 2e-26 Identities = 76/207 (36%), Positives = 109/207 (52%), Gaps = 21/207 (10%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 G L AGPPGTGKTL+AKA++ EA P+ V S+F G ARV DLFK+ + +P Sbjct: 380 GYLFAGPPGTGKTLMAKAMSYEAETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPC 439 Query: 191 IIFIDELDAVGGSR------------------GRSFNDER---DQTLNQLLTEMDGFDSD 307 I++IDE+D++ R G + N ++ D L Q L MDG+ Sbjct: 440 ILYIDEIDSIAERREEANKQLEQLKTIGDSIEGSNINIDQKPSDTVLMQFLIYMDGYKKR 499 Query: 308 VKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIIC 487 +I++ ATNR + LD A+ RPGRF R++ P E R+ IL + LR D + Sbjct: 500 NDLIIIGATNRIETLDDAIMRPGRFDRQIVFSPPFFEERKDILRIFLRNTKALVD-DTTK 558 Query: 488 DLVANVTPGLVGADLANIVNEAALLAA 568 ++A + GL G DL + + LL+A Sbjct: 559 TMMAERSIGLNGCDLRLLADNILLLSA 585
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 117 bits (292), Expect = 3e-26 Identities = 74/208 (35%), Positives = 115/208 (55%), Gaps = 24/208 (11%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG+LL GPPGTGKT+LA+AVA E+ FFS+SAS ++G VR LF AK+ +P Sbjct: 639 RGMLLFGPPGTGKTMLARAVATESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSP 698 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTL-NQLL--------------------TEMDGFDS 304 SIIF+DE+D++ GSR +E + + N+ L ++ +G + Sbjct: 699 SIIFVDEIDSIMGSRNNENENESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDED 758 Query: 305 DVKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRR---KILAVHLRKVPLEEDS 475 D +V+V+AATN P ++D A R RF R+ ++ +P+ + R K L H + E D Sbjct: 759 DTRVLVLAATNLPWSIDEAARR--RFVRRQYIPLPEDQTRHVQFKKLLSHQKHTLTESD- 815 Query: 476 EIICDLVANVTPGLVGADLANIVNEAAL 559 D + +T G G+D+ ++ +AA+ Sbjct: 816 ---FDELVKITEGYSGSDITSLAKDAAM 840
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 114 bits (284), Expect = 3e-25 Identities = 75/205 (36%), Positives = 112/205 (54%), Gaps = 19/205 (9%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEA 172 +G+LL GPPGTGKTL+A+ + A E I V+ E + +VG+ VR LF +A Sbjct: 305 KGILLYGPPGTGKTLIARQIGKMLNAREPKI----VNGPEILNKYVGQSEENVRKLFADA 360 Query: 173 K--------EAAPSIIFIDELDAVGGSRGRSFNDER--DQTLNQLLTEMDGFDSDVKVIV 322 + E+ II DELDA+ RG S D DQ +NQLL +MDG D ++V Sbjct: 361 EREYRDRGEESGLHIIIFDELDAICKKRGSSGGDTGVGDQVVNQLLAKMDGVDQLNNILV 420 Query: 323 MAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVP----LEEDSEIICD 490 + TNR +D AL RPGR + + +PD GR +IL +H ++ LE D ++ + Sbjct: 421 IGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDM--E 478 Query: 491 LVANVTPGLVGADLANIVNEAALLA 565 +A++T GA++A ++ A+ A Sbjct: 479 ELASLTKNFSGAEIAGLIKSASSFA 503 Score = 43.1 bits (100), Expect = 5e-04 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Frame = +2 Query: 14 VLLAGPPGTGKTLLAKAVAGEAGIPFFS-VSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 VLL+GP +GKT LA +A + PF VSA V M A V +F+++ ++ S Sbjct: 588 VLLSGPIASGKTALAATIALGSEFPFVKLVSAESMVGMNENARVAHVNRVFEDSYKSPLS 647 Query: 191 IIFIDELDAV 220 +I +DE++ + Sbjct: 648 VIVVDEIERI 657
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 114 bits (284), Expect = 3e-25 Identities = 71/186 (38%), Positives = 105/186 (56%) Frame = +2 Query: 11 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 GVLL GPPG GKT+LAKA+A E+G F S+ S ++ + G V +F A + P Sbjct: 128 GVLLYGPPGCGKTMLAKALAKESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPC 187 Query: 191 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 370 IIFIDE+D+ R + ++ + +T DG ++ +V+++ ATNR +D A R Sbjct: 188 IIFIDEIDSFLRERSSTDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLR 247 Query: 371 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 550 R ++ V +P + R KIL+V L+ L+ED E L+A+ T G G+DL + E Sbjct: 248 --RLPKRFLVSLPGSDQRYKILSVLLKDTKLDED-EFDLQLIADNTKGFSGSDLKELCRE 304 Query: 551 AALLAA 568 AAL AA Sbjct: 305 AALDAA 310
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 112 bits (280), Expect = 7e-25 Identities = 71/187 (37%), Positives = 103/187 (55%), Gaps = 2/187 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPG GKTL+AKA A EAG F ++ S + + G +F A + P Sbjct: 131 KGVLLYGPPGCGKTLIAKATAKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQP 190 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSD--VKVIVMAATNRPKALDSA 361 SIIFIDE+D+ +R S ++ Q ++ DG D+D +VI+M ATNRP+ LDSA Sbjct: 191 SIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSA 250 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 + R R + + P++ R+ IL + L +E E+ +A T G G+DL + Sbjct: 251 ILR--RMPTRFHINQPNVRQRKDILKLILENENVESAVEL--SEIAKQTDGFSGSDLREM 306 Query: 542 VNEAALL 562 +AALL Sbjct: 307 CRDAALL 313
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 112 bits (279), Expect = 1e-24 Identities = 72/187 (38%), Positives = 104/187 (55%), Gaps = 2/187 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPG GKTL+AKA A EAG F ++ S + + G +F A + P Sbjct: 127 KGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQP 186 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSD--VKVIVMAATNRPKALDSA 361 SIIFIDE+D+ +R S ++ Q ++ DG D+D +VIVM ATNRP+ LDSA Sbjct: 187 SIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSA 246 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 + R R + + P L+ R IL + L+ ++ +++ VA T G G+DL + Sbjct: 247 IMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLL--EVAQETDGFSGSDLKEM 302 Query: 542 VNEAALL 562 +AALL Sbjct: 303 CRDAALL 309
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 112 bits (279), Expect = 1e-24 Identities = 72/187 (38%), Positives = 104/187 (55%), Gaps = 2/187 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPG GKTL+AKA A EAG F ++ S + + G +F A + P Sbjct: 127 KGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQP 186 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSD--VKVIVMAATNRPKALDSA 361 SIIFIDE+D+ +R S ++ Q ++ DG D+D +VIVM ATNRP+ LDSA Sbjct: 187 SIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSA 246 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 + R R + + P L+ R IL + L+ ++ +++ VA T G G+DL + Sbjct: 247 IMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLL--EVAQETDGFSGSDLKEM 302 Query: 542 VNEAALL 562 +AALL Sbjct: 303 CRDAALL 309
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 112 bits (279), Expect = 1e-24 Identities = 72/187 (38%), Positives = 104/187 (55%), Gaps = 2/187 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPG GKTL+AKA A EAG F ++ S + + G +F A + P Sbjct: 127 KGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQP 186 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSD--VKVIVMAATNRPKALDSA 361 SIIFIDE+D+ +R S ++ Q ++ DG D+D +VIVM ATNRP+ LDSA Sbjct: 187 SIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSA 246 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 + R R + + P L+ R IL + L+ ++ +++ VA T G G+DL + Sbjct: 247 IMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLL--EVAQETDGFSGSDLKEM 302 Query: 542 VNEAALL 562 +AALL Sbjct: 303 CRDAALL 309
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 111 bits (277), Expect = 2e-24 Identities = 67/196 (34%), Positives = 110/196 (56%), Gaps = 14/196 (7%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEA-GIPFFSVSASEFVEMFVGRGAARVRDLFKEAK--- 175 +G+LL GPPGTGKTL+A+ ++ G V+ E + +VG +R+LFK+A+ Sbjct: 311 KGLLLYGPPGTGKTLIARKLSKMLNGKEPKIVNGPEMLSKYVGASEENIRNLFKDAEAEY 370 Query: 176 -----EAAPSIIFIDELDAVGGSRGRSFNDER---DQTLNQLLTEMDGFDSDVKVIVMAA 331 ++ +I DELD+V RG +D D +NQLL++MDG D ++V+ Sbjct: 371 KLKGEDSDLHVIIFDELDSVFKQRGSGKSDGTGVGDNVVNQLLSKMDGVDQLNNILVIGM 430 Query: 332 TNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIICDLVANV 505 TNR +D+AL RPGRF ++ + +PD +GR+ I +H +K+ S++ D ++ + Sbjct: 431 TNRLDLIDTALLRPGRFEIQIEISLPDEKGRKDIFLIHTKKLTENGILSSDVNFDELSTL 490 Query: 506 TPGLVGADLANIVNEA 553 T GA++ + N A Sbjct: 491 TKNFTGAEIEGLCNSA 506 Score = 43.1 bits (100), Expect = 5e-04 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 3/96 (3%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFS-VSASEFVEMFVGRGAARVRDLFKEAKEAA 184 R +LL GPPG GKT +A +A + PF +SA V M R + ++F++ ++ Sbjct: 594 RSILLYGPPGVGKTSIATTLALNSDFPFIKMLSAETLVGMGELRKIQEIDNVFRDVHKSP 653 Query: 185 PSIIFIDELDAVGGSR--GRSFNDERDQTLNQLLTE 286 +++ ID+++ + G F+++ Q L LT+ Sbjct: 654 LNVLVIDKIENIINYNPIGPRFSNDILQVLMVYLTK 689
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 108 bits (269), Expect = 1e-23 Identities = 74/201 (36%), Positives = 109/201 (54%), Gaps = 15/201 (7%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEA-GIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 184 +G+LL GPPGTGKTL+A+ + G V+ E + FVG VRDLF +A++ Sbjct: 251 KGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQ 310 Query: 185 PS--------IIFIDELDAVGGSRG--RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAAT 334 + +I DE+DA+ SRG R D +NQLLT++DG ++ V+++ T Sbjct: 311 RTLGDASELHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEALNNVLLIGMT 370 Query: 335 NRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL----VAN 502 NR LD AL RPGR +V + +PD GR +IL +H K ++E+S + D+ +A Sbjct: 371 NRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNK--MKENSFLGTDINLQELAA 428 Query: 503 VTPGLVGADLANIVNEAALLA 565 T GA+L +V A A Sbjct: 429 RTKNYSGAELEGVVKSATSYA 449 Score = 43.5 bits (101), Expect = 4e-04 Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 3/117 (2%) Frame = +2 Query: 17 LLAGPPGTGKTLLAKAVAGEAGIPFFS-VSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 193 LL GP G+GKT LA + ++ P+ VSA + + A + +F++A ++ SI Sbjct: 534 LLEGPSGSGKTALAATIGIDSDFPYVKIVSAETMIGLSESTKCAHIVKVFEDAYKSPMSI 593 Query: 194 IFIDELDAVGG--SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 I +D+++ + + G F++ QTL LL + K++V T+ L+S Sbjct: 594 IILDDIERLLEFIAIGPRFSNIISQTLMVLLKRLP--PKGKKLLVFGTTSEVTFLES 648
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 107 bits (267), Expect = 2e-23 Identities = 75/205 (36%), Positives = 112/205 (54%), Gaps = 19/205 (9%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEA 172 +G+LL GPPGTGKTL+A+ + A E I V+ E + +VG +R+LFK+A Sbjct: 275 KGLLLYGPPGTGKTLIARKIGTMLNAKEPKI----VNGPEILSKYVGSSEENIRNLFKDA 330 Query: 173 K--------EAAPSIIFIDELDAV---GGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVI 319 + E++ II DELD+V GSRG D +NQLL +MDG D ++ Sbjct: 331 EAEYRAKGEESSLHIIIFDELDSVFKQRGSRGDG-TGVGDNVVNQLLAKMDGVDQLNNIL 389 Query: 320 VMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKV---PLEEDSEIICD 490 V+ TNR +DSAL RPGRF +V + +PD +GR +I + +K+ + D + + Sbjct: 390 VIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNMMSDDVNLAE 449 Query: 491 LVANVTPGLVGADLANIVNEAALLA 565 L A +T GA++ +V A+ A Sbjct: 450 LAA-LTKNFSGAEIEGLVKSASSFA 473 Score = 42.0 bits (97), Expect = 0.001 Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Frame = +2 Query: 14 VLLAGPPGTGKTLLAKAVAGEAGIPFFS-VSASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 +L+ GP G+GKT LA +A ++G PF +S +E M A + + F++A ++ + Sbjct: 560 LLIHGPAGSGKTALAAEIALKSGFPFIRLISPNELSGMSESAKIAYIDNTFRDAYKSPLN 619 Query: 191 IIFIDELDAV 220 I+ ID L+ + Sbjct: 620 ILVIDSLETL 629
>MSP1_CAEEL (P54815) Protein MSP1 homolog| Length = 342 Score = 107 bits (266), Expect = 3e-23 Identities = 70/188 (37%), Positives = 102/188 (54%), Gaps = 1/188 (0%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG+LL GPPG GKTLLAKAVA AG F ++ S + + G +F A++ P Sbjct: 118 RGILLYGPPGCGKTLLAKAVARAAGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQP 177 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSD-VKVIVMAATNRPKALDSAL 364 +IIFIDE+D+ R ++ Q +T DGF S ++IVM ATNRP+ +D+A+ Sbjct: 178 TIIFIDEIDSFLRDRQSHDHESTAMMKAQFMTLWDGFSSSGDQIIVMGATNRPRDVDAAI 237 Query: 365 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 544 R R + + V VP+ + R +IL V LR + ++ + +A GL G+DL + Sbjct: 238 LR--RMTARFQVPVPNAKQRSQILNVILRNEKI--NNTVNLGEIAQAAEGLSGSDLKEVC 293 Query: 545 NEAALLAA 568 A L A Sbjct: 294 RLALLARA 301
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 105 bits (263), Expect = 7e-23 Identities = 71/201 (35%), Positives = 111/201 (55%), Gaps = 19/201 (9%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEA 172 +G+LL GPPGTGKTL+A+ + A E I V+ + ++ +VG A VR LF EA Sbjct: 254 KGILLYGPPGTGKTLMARQIGTMLNAREPKI----VNGPQILDKYVGESEANVRRLFAEA 309 Query: 173 KE--------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIV 322 +E + II DE+DA+ RG + D +NQLLT++DG D ++V Sbjct: 310 EEEEKRLGPNSGLHIIIFDEIDAICKQRGSVAGNSGVHDTVVNQLLTKIDGVDQLNNILV 369 Query: 323 MAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL--- 493 + TNR +D AL RPGR ++ + +P+ +GR +IL +H ++ + E ++I D+ Sbjct: 370 IGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKR--MREFNKINDDVDNK 427 Query: 494 -VANVTPGLVGADLANIVNEA 553 +A +T GA+L +V A Sbjct: 428 EIAALTKNFSGAELEGLVRAA 448 Score = 40.4 bits (93), Expect = 0.004 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 3/117 (2%) Frame = +2 Query: 14 VLLAGPPGTGKTLLAKAVAGEAGIPFFSV-SASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 VL+AG P +GKT LA +A + PF V S + V +R +F +A + S Sbjct: 539 VLVAGAPNSGKTALAAQLAKMSDFPFVKVCSPEDMVGYTESAKCLHIRKIFDDAYRSMLS 598 Query: 191 IIFIDELDAV--GGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 I +D ++ + GS G +++ Q L LL + K++++ ++R + L+ Sbjct: 599 CIVVDNVERLLDYGSIGPRYSNMTLQALLVLLKKQP--PKGRKLLILCTSSRREVLE 653
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 105 bits (261), Expect = 1e-22 Identities = 68/199 (34%), Positives = 106/199 (53%), Gaps = 17/199 (8%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEA 172 +G+LL GPPG GKTLLA+ + A E + V+ E + +VG A +R LF +A Sbjct: 254 KGILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADA 309 Query: 173 KE--------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIV 322 +E + II DE+DA+ RG D +NQLL+++DG + ++V Sbjct: 310 EEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILV 369 Query: 323 MAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIICDLV 496 + TNRP +D AL RPGR K+ +G+PD +GR +IL +H ++ + +++ + Sbjct: 370 IGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKEL 429 Query: 497 ANVTPGLVGADLANIVNEA 553 A T GA+L +V A Sbjct: 430 AVETKNFSGAELEGLVRAA 448 Score = 38.5 bits (88), Expect = 0.014 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = +2 Query: 14 VLLAGPPGTGKTLLAKAVAGEAGIPFFSV-SASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 VLL GPP +GKT +A +A E+ PF + S + + ++ +F +A ++ S Sbjct: 539 VLLEGPPHSGKTAVAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 191 IIFIDELD 214 + +D+++ Sbjct: 599 CVVVDDIE 606
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 105 bits (261), Expect = 1e-22 Identities = 68/199 (34%), Positives = 106/199 (53%), Gaps = 17/199 (8%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEA 172 +G+LL GPPG GKTLLA+ + A E + V+ E + +VG A +R LF +A Sbjct: 254 KGILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADA 309 Query: 173 KE--------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIV 322 +E + II DE+DA+ RG D +NQLL+++DG + ++V Sbjct: 310 EEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILV 369 Query: 323 MAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIICDLV 496 + TNRP +D AL RPGR K+ +G+PD +GR +IL +H ++ + +++ + Sbjct: 370 IGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKEL 429 Query: 497 ANVTPGLVGADLANIVNEA 553 A T GA+L +V A Sbjct: 430 AVETKNFSGAELEGLVRAA 448 Score = 39.7 bits (91), Expect = 0.006 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = +2 Query: 14 VLLAGPPGTGKTLLAKAVAGEAGIPFFSV-SASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 VLL GPP +GKT LA +A E+ PF + S + + ++ +F +A ++ S Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 191 IIFIDELD 214 + +D+++ Sbjct: 599 CVVVDDIE 606
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 105 bits (261), Expect = 1e-22 Identities = 68/199 (34%), Positives = 106/199 (53%), Gaps = 17/199 (8%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEA 172 +G+LL GPPG GKTLLA+ + A E + V+ E + +VG A +R LF +A Sbjct: 254 KGILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADA 309 Query: 173 KE--------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIV 322 +E + II DE+DA+ RG D +NQLL+++DG + ++V Sbjct: 310 EEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILV 369 Query: 323 MAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIICDLV 496 + TNRP +D AL RPGR K+ +G+PD +GR +IL +H ++ + +++ + Sbjct: 370 IGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKEL 429 Query: 497 ANVTPGLVGADLANIVNEA 553 A T GA+L +V A Sbjct: 430 AVETKNFSGAELEGLVRAA 448 Score = 39.7 bits (91), Expect = 0.006 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = +2 Query: 14 VLLAGPPGTGKTLLAKAVAGEAGIPFFSV-SASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 VLL GPP +GKT LA +A E+ PF + S + + ++ +F +A ++ S Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 191 IIFIDELD 214 + +D+++ Sbjct: 599 CVVVDDIE 606
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 102 bits (255), Expect = 6e-22 Identities = 68/199 (34%), Positives = 105/199 (52%), Gaps = 17/199 (8%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEA 172 RG+LL GPPGTGKTL+A+ + A E I V+ + ++ +VG + VR LF +A Sbjct: 331 RGILLFGPPGTGKTLMARQIGKMLNAREPKI----VNGPQILDKYVGESESNVRKLFADA 386 Query: 173 KE--------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIV 322 +E + II DE+DA+ RG D +NQLL++MDG + ++V Sbjct: 387 EEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVHDTVVNQLLSKMDGVEQLNNILV 446 Query: 323 MAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVP--LEEDSEIICDLV 496 + TNR +D AL RPGR ++ V +PD GR +IL +H ++ + D + + + Sbjct: 447 IGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDI 506 Query: 497 ANVTPGLVGADLANIVNEA 553 + T GA+L +V A Sbjct: 507 SKRTKNFSGAELEGLVRAA 525 Score = 38.1 bits (87), Expect = 0.018 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSV-SASEFVEMFVGRGAARVRDLFKEAKEAA 184 R V+LAG TGKT LA +A + PF V S + V ++ F++AK + Sbjct: 614 RTVVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPEDTVGFSESAKCMALKKAFEDAKRSK 673 Query: 185 PSIIFIDELD 214 S++ ID L+ Sbjct: 674 LSVLLIDNLE 683
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 102 bits (253), Expect = 1e-21 Identities = 64/176 (36%), Positives = 97/176 (55%), Gaps = 21/176 (11%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAG---------------EAGIPFFSVSASEFVEMFVGRGA 142 +GVLL GPPG GKTL+AKAVA EA F ++ E + FVG Sbjct: 287 KGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETE 346 Query: 143 ARVRDLFKEAKEAA----PSIIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGFDSD 307 +R +F+ A+E A P I+F DE+D++ +RG + + + T+ QLL+E+DG + Sbjct: 347 RHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGVEGL 406 Query: 308 VKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRK-VPLEED 472 VIV+ A+NR +D A+ RPGR K+ + PD E + I + +L + +P+ D Sbjct: 407 ENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHAD 462
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 102 bits (253), Expect = 1e-21 Identities = 64/176 (36%), Positives = 97/176 (55%), Gaps = 21/176 (11%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAG---------------EAGIPFFSVSASEFVEMFVGRGA 142 +GVLL GPPG GKTL+AKAVA EA F ++ E + FVG Sbjct: 287 KGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETE 346 Query: 143 ARVRDLFKEAKEAA----PSIIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGFDSD 307 +R +F+ A+E A P I+F DE+D++ +RG + + + T+ QLL+E+DG + Sbjct: 347 RHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGVEGL 406 Query: 308 VKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRK-VPLEED 472 VIV+ A+NR +D A+ RPGR K+ + PD E + I + +L + +P+ D Sbjct: 407 ENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHAD 462
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 102 bits (253), Expect = 1e-21 Identities = 64/176 (36%), Positives = 96/176 (54%), Gaps = 21/176 (11%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAG---------------EAGIPFFSVSASEFVEMFVGRGA 142 +GVLL GPPG GKTL+AKAVA EA F ++ E + FVG Sbjct: 287 KGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAREAKSYFLNIKGPELLNKFVGETE 346 Query: 143 ARVRDLFKEAKEAA----PSIIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGFDSD 307 +R +F+ A+E A P I+F DE+D++ +RG + + + T+ QLL+E+DG + Sbjct: 347 RHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGVEGL 406 Query: 308 VKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHL-RKVPLEED 472 VIV+ A+NR +D A+ RPGR K+ + PD E + I + +L +P+ D Sbjct: 407 ENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTESLPVHAD 462
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 101 bits (252), Expect = 1e-21 Identities = 67/201 (33%), Positives = 110/201 (54%), Gaps = 19/201 (9%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEA 172 +G+LL GPPGTGKTL+A+ + A E I V+ + ++ +VG A +R LF EA Sbjct: 259 KGILLYGPPGTGKTLMARQIGTMLNAREPKI----VNGPQILDKYVGESEANIRRLFAEA 314 Query: 173 KE--------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIV 322 +E + II DE+DA+ +RG + D +NQLL ++DG + ++V Sbjct: 315 EEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILV 374 Query: 323 MAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL--- 493 + TNR +D AL RPGR ++ + +P+ +GR +IL +H ++ + + ++I D+ Sbjct: 375 IGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKR--MRDFNKIASDVDNN 432 Query: 494 -VANVTPGLVGADLANIVNEA 553 +A T GA+L +V A Sbjct: 433 EIAAKTKNFSGAELEGLVRAA 453 Score = 34.3 bits (77), Expect = 0.26 Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 3/117 (2%) Frame = +2 Query: 14 VLLAGPPGTGKTLLAKAVAGEAGIPFFSV-SASEFVEMFVGRGAARVRDLFKEAKEAAPS 190 VL+ G P +GK+ LA +A + PF V S + V +R +F +A + S Sbjct: 544 VLIEGAPNSGKSALAANLAQLSDFPFVKVCSPEDMVGFTESAKCLHIRKIFDDAYRSTLS 603 Query: 191 IIFIDELDAV--GGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 I +D ++ + G G +++ Q L LL + K++++ ++R L+ Sbjct: 604 CIVVDNVERLLDYGPIGPRYSNLTLQALLVLLKKQP--PKGRKLLILCTSSRRDVLE 658
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 95.5 bits (236), Expect = 9e-20 Identities = 63/186 (33%), Positives = 100/186 (53%), Gaps = 2/186 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +GVLL GPPG GKTL+AKA A +G F ++ AS + + G +F A + P Sbjct: 130 KGVLLYGPPGCGKTLIAKATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQP 189 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDS--DVKVIVMAATNRPKALDSA 361 IIF+DE+D+ +R ++ Q ++ DG D+ + +V+VM ATNRP+ +D+A Sbjct: 190 CIIFLDEIDSFLRNRSSMDHEATAMMKAQFMSLWDGLDTGENSQVMVMGATNRPQDVDAA 249 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 541 + R R VG+P+ R +IL + L L + I +A+ + G G+DL + Sbjct: 250 ILR--RMPTAFHVGLPNAAQREEILRLILSGENL--SNAINLKEIASQSEGYSGSDLKEL 305 Query: 542 VNEAAL 559 +AA+ Sbjct: 306 CRDAAM 311
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 94.0 bits (232), Expect = 3e-19 Identities = 59/189 (31%), Positives = 96/189 (50%), Gaps = 1/189 (0%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 I +G+LL G GTGK+L AK++A E +P + +G ARVR + + A+ Sbjct: 274 IPKGLLLVGIQGTGKSLTAKSIANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQFAETI 333 Query: 182 APSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGF-DSDVKVIVMAATNRPKALDS 358 +P I++IDE+D G +FN++ T T + + V V+A N +L Sbjct: 334 SPCILWIDEIDK--AFTGSNFNNDSGTTKRVFGTFITWLSEKKSPVFVVATANNIDSLPP 391 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 538 L R GRF F+G+PDL+ R I VHL+K+ + S ++++ + GA++ Sbjct: 392 ELLRKGRFDEVFFIGLPDLKERECIFKVHLKKIRPKSWSTYDTEILSAQSNRFSGAEIEE 451 Query: 539 IVNEAALLA 565 + EA +A Sbjct: 452 SIYEAMHIA 460
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 81.3 bits (199), Expect = 2e-15 Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 4/186 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG+LL G GTGK+L AKA+A E +P + VG +R+R + A+ +P Sbjct: 260 RGLLLIGIQGTGKSLTAKAIATEWQLPLLKLDVGRLFGGIVGESESRLRQMIDVAETLSP 319 Query: 188 SIIFIDELDAVGGSRGRSFNDERDQ--TLNQLLTEMDGFDSD--VKVIVMAATNRPKALD 355 I++IDE+D + S ND R T N++L + S+ V V+A N L Sbjct: 320 CILWIDEMD-----KAFSNNDSRGDSGTSNRVLATFISWLSEKTKPVFVVATANNVDLLP 374 Query: 356 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 535 + R GRF F+ +P+LE R++I +H+++ +A ++ GA++ Sbjct: 375 LEIIRKGRFDEIFFLDLPELEERKEIFKIHIQEFRPNSWKLFDYKKLAQLSESFSGAEIR 434 Query: 536 NIVNEA 553 + EA Sbjct: 435 QSIIEA 440
>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL| Length = 330 Score = 79.3 bits (194), Expect = 7e-15 Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 1/154 (0%) Frame = +2 Query: 14 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 193 +L GPPG GKTL A+ A E G+P F V + ++G A +R F+ A++ P + Sbjct: 121 MLFCGPPGCGKTLCAEIFAAELGLPLFRVKLDRLISSYLGETATNIRKTFEFARK-QPCV 179 Query: 194 IFIDELDAVGGSRGRS-FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 370 +F DE DA+ +R S ++E + +N LL +D K ++AATN ++LD+A+ R Sbjct: 180 LFFDEFDALARTRDDSGEHNELRRVVNSLLLFIDNMQP--KGFLIAATNLDRSLDAAIWR 237 Query: 371 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEED 472 RF ++ P+ + L + + VP+ D Sbjct: 238 --RFDEVLWFDRPEAAMIGRFLKLKFKNVPVAFD 269
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 74.3 bits (181), Expect = 2e-13 Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 1/102 (0%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAA-RVRDLFKEAKE 178 + G+LL GPPGTGKTLL +A+AGEA +P +S S +E G AA +++ +F+EA++ Sbjct: 1006 LPHGILLTGPPGTGKTLLVQALAGEAQVPVIVLSGSSLME--PGESAAFKLQLVFQEARQ 1063 Query: 179 AAPSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDS 304 AP I+FIDE+D + + +R Q L + GF+S Sbjct: 1064 LAPCIVFIDEID--------TLSSKRSQLLQNPMANDPGFES 1097 Score = 68.6 bits (166), Expect = 1e-11 Identities = 41/107 (38%), Positives = 62/107 (57%) Frame = +2 Query: 245 NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGR 424 N+++ L+QLL E+DG V++ ATNRP+ LD AL RPGRF + V VG+P + R Sbjct: 1148 NEKQVSLLSQLLIELDGIQGRNGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKKR 1207 Query: 425 RKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLA 565 +IL + + + ++ + T G ADLA ++NE+AL A Sbjct: 1208 VEILQFYGQTLGYQK--TMPWAYFGERTVGFTAADLATLMNESALKA 1252
>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)| Length = 491 Score = 72.4 bits (176), Expect = 8e-13 Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 3/153 (1%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 +G+LL G GTGK+L AKA+A + +P + + VG +R+R++ A+ +P Sbjct: 260 KGLLLVGIQGTGKSLTAKAIANDWTLPLLRLDIGKLFGGLVGESESRMREMVTIAEGLSP 319 Query: 188 SIIFIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 +++IDE+D S+G S R +T + + V V+A N + L S Sbjct: 320 CVLWIDEIDKAFSNLYSQGDSGTSAR--VFGTFITWLS--EKTTPVFVVATANTIQNLPS 375 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKV 457 + R GRF F+ +P+ E R I +HL ++ Sbjct: 376 EMLRKGRFDEIFFLDLPNNEERELIFQIHLARI 408
>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1| Length = 456 Score = 70.9 bits (172), Expect = 2e-12 Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 4/136 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEA--GIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 RG LL GPPG+GKT +A+AGE I ++S + + R+ L E Sbjct: 261 RGYLLYGPPGSGKTSFIQALAGELDYNICILNLSENNLTD-------DRLNHLMNNMPER 313 Query: 182 APSIIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 355 SI+ ++++DA R ++ T + LL +DG S + I TN P+ LD Sbjct: 314 --SILLLEDIDAAFNKRSQTGEQGFHSSVTFSGLLNALDGVTSSEETITFMTTNHPEKLD 371 Query: 356 SALCRPGRFSRKVFVG 403 +A+ RPGR KVFVG Sbjct: 372 AAIMRPGRIDYKVFVG 387
>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 449 Score = 65.9 bits (159), Expect = 8e-11 Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 4/164 (2%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG LL GPPG+GKT A+AGE ++ +E G R+ L A Sbjct: 243 RGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAE-----KGLTDDRLNHLLSNVPPKA- 296 Query: 188 SIIFIDELDAVGGSRGRS--FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 361 ++ ++++D+ R RS + T + LL +DG S + I+ TN P+ LD A Sbjct: 297 -VVLLEDVDSAFQGRERSGEVGFHANVTFSGLLNALDGVTSSDERIIFMTTNHPEKLDPA 355 Query: 362 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEED--SEIIC 487 L RPGR K ++G E R++ P D S+I+C Sbjct: 356 LVRPGRVDVKAYLGNATPEQVREMFTRFYGHSPEMADDLSDIVC 399
>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)| Length = 69 Score = 63.9 bits (154), Expect = 3e-10 Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 2/69 (2%) Frame = +2 Query: 314 VIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIIC 487 V+V+A TNRP LD AL RPGRF R+++ G P ++GR I VHLR + L++ + + + Sbjct: 1 VVVLAGTNRPDVLDPALMRPGRFHRQIYTGPPYIKGRSSIFKVHLRPLKLDKSLNKDTLA 60 Query: 488 DLVANVTPG 514 +A +TPG Sbjct: 61 RKLAVLTPG 69
>ATAD3_MOUSE (Q925I1) ATPase family AAA domain-containing protein 3 (AAA-ATPase| TOB3) Length = 591 Score = 63.2 bits (152), Expect = 5e-10 Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 16/194 (8%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGR-GAARVRDLFKEAKEAA 184 R VL+ GPPGTGKTL AK +A +G+ + ++ + M GR G + +F A + Sbjct: 345 RNVLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM--GREGVTAMHKVFDWASTSR 402 Query: 185 PS-IIFIDELDAVGGSRG-RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 ++F+DE DA R +++ TLN L S K +++ A+N+P+ D Sbjct: 403 RGLLLFVDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSS--KFMLVLASNQPEQFDW 460 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSE-------------IICDLVA 499 A+ R V +P E R +++ ++ K L+ +E C VA Sbjct: 461 AI--NDRIDEMVCFALPQREERERLVRMYFDKYVLKPATEGKQRLKVAQFDYGKKCSEVA 518 Query: 500 NVTPGLVGADLANI 541 +T G+ G ++A + Sbjct: 519 QLTEGMSGREIAQL 532
>ATD3A_HUMAN (Q9NVI7) ATPase family AAA domain-containing protein 3A| Length = 634 Score = 62.8 bits (151), Expect = 7e-10 Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 16/194 (8%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGR-GAARVRDLFKEAKEAA 184 R +L+ GPPGTGKTL AK +A +G+ + ++ + M GR G + LF A + Sbjct: 394 RNILMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM--GREGVTAMHKLFDWANTSR 451 Query: 185 PS-IIFIDELDAVGGSRG-RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 ++F+DE DA R +++ TLN L + K +++ A+N+P+ D Sbjct: 452 RGLLLFVDEADAFLRKRATEKISEDLRATLNAFLYRTGQHSN--KFMLVLASNQPEQFDW 509 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSE-------------IICDLVA 499 A+ R + V +P E R +++ ++ K L+ +E C VA Sbjct: 510 AI--NDRINEMVHFDLPGQEERERLVRMYFDKYVLKPATEGKQRLKLAQFDYGRKCSEVA 567 Query: 500 NVTPGLVGADLANI 541 +T G+ G ++A + Sbjct: 568 RLTEGMSGREIAQL 581
>ATD3B_HUMAN (Q5T9A4) ATPase family AAA domain-containing protein 3B| Length = 648 Score = 62.4 bits (150), Expect = 9e-10 Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 16/194 (8%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGR-GAARVRDLFKEAKEAA 184 R +LL GPPGTGKTL AK +A +G+ + ++ + M GR G + LF A + Sbjct: 346 RHILLYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM--GREGVTAMHKLFDWANTSR 403 Query: 185 PS-IIFIDELDAVGGSRG-RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 358 ++F+DE DA R + + TLN L M + K +++ A+N P+ D Sbjct: 404 RGLLLFMDEADAFLRKRATEEISKDLRATLNAFLYHMGQHSN--KFMLVLASNLPEQFDC 461 Query: 359 ALCRPGRFSRKVFVGVPDLEGRRKILAVHL------------RKVPLEE-DSEIICDLVA 499 A+ R V +P E R +++ +H R++ L + D C VA Sbjct: 462 AI--NSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVA 519 Query: 500 NVTPGLVGADLANI 541 +T G+ G ++A + Sbjct: 520 RLTEGMSGREIAQL 533
>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 420 Score = 58.5 bits (140), Expect = 1e-08 Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 7/139 (5%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG LL GPPG GK+ A+AGE G +S S+ R+ L A + Sbjct: 224 RGYLLYGPPGCGKSSFITALAGELGYSICLMSLSDR-----SLSDDRLNHLLSVAPQQ-- 276 Query: 188 SIIFIDELDAVGGSRGR-------SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPK 346 SII ++++DA SR ++ T + LL +DG S IV TN + Sbjct: 277 SIILLEDVDAAFVSRELLPTENPLAYQGMGRLTFSGLLNALDGVASSEARIVFMTTNFIE 336 Query: 347 ALDSALCRPGRFSRKVFVG 403 LD AL RPGR K +VG Sbjct: 337 RLDPALVRPGRVDLKQYVG 355
>YCF2_PINKO (Q85WV5) Protein ycf2| Length = 1320 Score = 57.8 bits (138), Expect = 2e-08 Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 24/209 (11%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFV--EMFVGRGAARV--------R 154 ++G+LL GP GTG++ L K++A ++ +P +S + + + R+ R Sbjct: 623 SKGILLIGPMGTGRSYLIKSLAADSYVPLIRISLKKLLYGKFLYYPDPGRIPTEFNTFWR 682 Query: 155 D-------LFKEAKEAAPSIIFIDEL------DAVGGSRGRSFNDERDQTLNQLLTEMDG 295 D F+ AK +P II+I + D + G F D L ++ Sbjct: 683 DTIDHFHITFELAKRMSPCIIWIPNIHELNVNDTITHLFGLGFTDSFLGLLLNYISRGGE 742 Query: 296 FDSDVKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDS 475 DS ++ +A+T+ P+ +D AL P R + + + + R++ + L L + Sbjct: 743 KDSIRNILFIASTHIPQRVDPALIAPNRLDSSINIRMLVIPQRQREFPILLCSKGLYSEK 802 Query: 476 EIIC-DLVANVTPGLVGADLANIVNEAAL 559 E+ C D ++T DLA + NEA + Sbjct: 803 EVSCPDEFGSITIDSDARDLAALANEALI 831
>YCF2_ANTFO (Q859W7) Protein ycf2| Length = 2392 Score = 57.4 bits (137), Expect = 3e-08 Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 18/204 (8%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFV--------EMFVG---RGAARV 151 ++G+LL GP GK+ L K +A ++ +P +S S+ + E ++ R+ Sbjct: 1651 SKGILLVGPTEIGKSYLIKNLAADSYVPLIKISISKLLYNKPDVITESWINILMESLQRL 1710 Query: 152 RDLFKEAKEAAPSIIFIDELDAVGGSRGRSFNDERDQT------LNQLLTEMDGFDSDVK 313 + + AK+ +P II+I ++ + +R N E D T L TE S Sbjct: 1711 TLILELAKKMSPCIIWIQDIHELNVNRSTE-NVESDPTFLLGILLKYFHTEFIS-KSTKG 1768 Query: 314 VIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEII-CD 490 +I++ +T+ P+ +D AL P R + + + + D+ R++ ++ L ++++ + Sbjct: 1769 IIIIGSTHLPRKVDPALISPNRLDKLMNIRIIDIFERQEKFSILLHSKRFYFKNKLLHFN 1828 Query: 491 LVANVTPGLVGADLANIVNEAALL 562 A T G G DL + NE +L+ Sbjct: 1829 EFAYRTMGYNGRDLVALANEVSLI 1852
>YCF2_MARPO (P09975) Protein ycf2| Length = 2136 Score = 57.4 bits (137), Expect = 3e-08 Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 17/204 (8%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFV--------EMFVG---RGAARV 151 ++G+LL GP TG++ L K +A E+ +P F +S ++ + E ++ R+ Sbjct: 1397 SKGILLIGPIETGRSYLIKNLAAESYVPLFKISINKLLYNKPDVITESWMNILIESLRRL 1456 Query: 152 RDLFKEAKEAAPSIIFIDELDAVGGSRGRSFNDERDQT--LNQLLTEMDGFDSDVK---V 316 AK+ +P II+I + + +R + N E D T L LL S K + Sbjct: 1457 NLTLDFAKKMSPCIIWIQNIHQLNVNR-LTQNVESDPTFLLGILLKYFQTDFSKTKKNNI 1515 Query: 317 IVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLE-EDSEIICDL 493 IV+ +T+ PK +D AL P R + + V + ++ R+K + L+K + +++ + Sbjct: 1516 IVIGSTHLPKKVDPALISPNRLDKIINVRLFNISQRKKQFPLLLKKKNFQLKENLFFLNE 1575 Query: 494 VANVTPGLVGADLANIVNEAALLA 565 + T G DL+ + NE L++ Sbjct: 1576 FGSRTMGYNLRDLSALTNEVLLIS 1599
>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 419 Score = 57.0 bits (136), Expect = 4e-08 Identities = 47/140 (33%), Positives = 62/140 (44%), Gaps = 8/140 (5%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 187 RG LL GPPG GK+ A+AGE +S S+ ++ D AP Sbjct: 224 RGYLLYGPPGCGKSSFITALAGELEYSICLMSLSD---------SSLSDDRLNHLLSVAP 274 Query: 188 --SIIFIDELDAVGGSRG------RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRP 343 SII ++++DA SR ++ T + LL +DG S IV TN Sbjct: 275 QQSIILLEDVDAAFVSRDLNKQNPTAYQGMGRLTFSGLLNALDGVASTEARIVFMTTNHI 334 Query: 344 KALDSALCRPGRFSRKVFVG 403 LD AL RPGR K +VG Sbjct: 335 DRLDPALIRPGRVDVKQYVG 354
>YCF2_PINTH (P41653) Protein ycf2| Length = 2054 Score = 56.2 bits (134), Expect = 6e-08 Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 24/212 (11%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSA-----SEFVEMFVGRGAARVRDLFK 166 +++G+LL GP GTG++ L K++A ++ +P +S E+++ + R K Sbjct: 1369 LSKGILLIGPMGTGRSYLVKSLAADSYVPLIRISLKKLWYGEYLDYPLERIPTEFDPFVK 1428 Query: 167 E-----------AKEAAPSIIFIDEL------DAVGGSRGRSFND-ERDQTLNQLLTEMD 292 + AK +P II+I + DA G F D +N L D Sbjct: 1429 DKMEDFHITLELAKRMSPCIIWIPNIHELNLNDATNYLFGFGFTDLFLSVLMNNLFRFRD 1488 Query: 293 G-FDSDVKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE 469 G DS ++V+A+T+ P+ +D AL P R R + + + + R++ + L L Sbjct: 1489 GEKDSMRNILVIASTHIPQRVDPALIAPNRLDRSINIRMLVIPQRQREFPILLCSKGLY- 1547 Query: 470 DSEIICDLVANVTPGLVGADLANIVNEAALLA 565 S D ++T DLA + +EA +L+ Sbjct: 1548 -SVKFPDEFGSITIDYAVRDLAALADEALILS 1578
>BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like protein) (H-BCS1)| Length = 419 Score = 55.1 bits (131), Expect = 1e-07 Identities = 48/140 (34%), Positives = 66/140 (47%), Gaps = 8/140 (5%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEA--GIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 RG LL GPPG GK+ A+AGE I S++ S + R+ L A + Sbjct: 224 RGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSD-------DRLNHLLSVAPQQ 276 Query: 182 APSIIFIDELDAVGGSRGRSF-NDERDQ-----TLNQLLTEMDGFDSDVKVIVMAATNRP 343 S++ ++++DA SR + N + Q T + LL +DG S IV TN Sbjct: 277 --SLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGVASTEARIVFMTTNHV 334 Query: 344 KALDSALCRPGRFSRKVFVG 403 LD AL RPGR K +VG Sbjct: 335 DRLDPALIRPGRVDLKEYVG 354
>BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 418 Score = 53.5 bits (127), Expect = 4e-07 Identities = 46/140 (32%), Positives = 64/140 (45%), Gaps = 8/140 (5%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEA--GIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 181 RG LL GPPG GK+ A+AGE I S++ S + R+ L A + Sbjct: 224 RGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSD-------DRLNHLLSVAPQQ 276 Query: 182 APSIIFIDELDAVGGSRGRSFNDERDQ------TLNQLLTEMDGFDSDVKVIVMAATNRP 343 S++ ++++DA SR + + T + LL +DG S IV TN Sbjct: 277 --SLVLLEDVDAAFLSRDLAVENPIKYQGLGRLTFSGLLNALDGVASTEARIVFMTTNYI 334 Query: 344 KALDSALCRPGRFSRKVFVG 403 LD AL RPGR K +VG Sbjct: 335 DRLDPALIRPGRVDLKEYVG 354
>PCH2_CAEEL (Q09535) Putative pachytene checkpoint protein 2| Length = 424 Score = 53.1 bits (126), Expect = 5e-07 Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 21/184 (11%) Frame = +2 Query: 2 ITRGVLLAGPPGTGKTLLAKAVAGEAGI---------PFFSVSASEFVEMFVGRGAARVR 154 + R +LL GPPGTGKT L K +A I +++ + V+ Sbjct: 171 VNRLILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQ 230 Query: 155 DLFKEAKEAAPS-----IIFIDELDAVG----GSRGRSFNDERDQTLNQLLTEMDGFDSD 307 +F + E A + IDE++++G S RS + + +N LLT++D Sbjct: 231 KMFDQIDELAEDEKCMVFVLIDEVESLGMCRESSSSRSEPSDAIRAVNALLTQIDRIRRR 290 Query: 308 VKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKIL---AVHLRKVPLEEDSE 478 V+++ +N LD AL + VG P R +L + L ++ + D+E Sbjct: 291 DNVLILCTSNLESTLDKALVDRADIVKN--VGQPSDFARYSMLKSSIMELARIGVVIDNE 348 Query: 479 IICD 490 + D Sbjct: 349 VHTD 352
>PCH2_YEAST (P38126) Pachytene checkpoint protein 2| Length = 536 Score = 52.0 bits (123), Expect = 1e-06 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 29/181 (16%) Frame = +2 Query: 14 VLLAGPPGTGKTLLAKAVAGEAGIP-----------------FFSVSASEFVEMFVGRGA 142 +L+ GPPGTGKT L KA+ + + +S + + G + Sbjct: 310 LLVHGPPGTGKTTLCKALCQKLSVRREFSDGSDTIDTNYKGIIIELSCARIFSKWFGESS 369 Query: 143 ARVRDLFKEAKEAAP--------SIIFIDELDAVGGSRGR--SFNDERD--QTLNQLLTE 286 + +FK+ +E + IDE++A+ SR S N+ D + +N LLT+ Sbjct: 370 KNISIVFKDIEELLKVNEGRGIFICLLIDEVEAIASSRTNLSSRNESTDGIRVVNTLLTQ 429 Query: 287 MDGFDSDVKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLE 466 +D + +A +N +LD A R +VG P EG +H+ KV +E Sbjct: 430 LDRLKKYHNFLALATSNLLDSLDDAFV--DRADGVFYVGNPTAEG-----ILHILKVCIE 482 Query: 467 E 469 E Sbjct: 483 E 483
>YCF2_ADICA (Q85B60) Protein ycf2| Length = 2104 Score = 50.8 bits (120), Expect = 3e-06 Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 18/204 (8%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFV----------EMFVGRGAA-RV 151 ++G+LL GP TG++ L + VA + P + +F+ F+ + + R+ Sbjct: 1389 SKGILLVGPVETGRSSLIRDVASNSYFPVVKLPLKKFIYNRSFFNNVRGNFISKESVHRL 1448 Query: 152 RDLFKEAKEAAPSIIFIDELDAVGGSRGRSFND-ERDQ--TLNQLLTEMDG--FDSDVKV 316 +F+ AKE +P ++I ++ + + RS+N E D L Q+L + +SD++ Sbjct: 1449 NIVFEIAKEMSPCTLWIQDIHEL--NICRSYNKLEADPKFLLCQILKSIGHKLGNSDIRE 1506 Query: 317 -IVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSE-IICD 490 +V+A T+ P +D AL P R ++ + + R+K L++ LR E + + + Sbjct: 1507 NVVIATTHVPARIDPALVAPNRLNQLINFRRSNGRQRQKELSILLRIKGFEVGANPTLLE 1566 Query: 491 LVANVTPGLVGADLANIVNEAALL 562 + T G DL + NEA L+ Sbjct: 1567 STVSGTAGYSKRDLLLLANEALLI 1590
>CLPX_TREDE (Q73M37) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 415 Score = 49.7 bits (117), Expect = 6e-06 Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 6/75 (8%) Frame = +2 Query: 14 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEM-FVGRGAAR-----VRDLFKEAK 175 VLL GP G+GKTLLAK +A + +PF A+ E +VG +++ + K Sbjct: 112 VLLLGPTGSGKTLLAKTLAQKMQVPFAIADATTLTEAGYVGEDVENILLKLIQNANGDIK 171 Query: 176 EAAPSIIFIDELDAV 220 EA IIFIDE+D + Sbjct: 172 EAEMGIIFIDEIDKI 186
>YCF2_PHYPA (P61243) Protein ycf2| Length = 2259 Score = 49.7 bits (117), Expect = 6e-06 Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 20/207 (9%) Frame = +2 Query: 5 TRGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFV--------EMFVG---RGAARV 151 ++G+LL G TG++ L K +A + IP +S ++ + E ++ R+ Sbjct: 1549 SKGILLIGSQETGRSYLVKNLAANSFIPLIKISINKLLYNKPDILTESWINILMESLRRL 1608 Query: 152 RDLFKEAKEAAPSIIFIDELDAVGGSRGRSFNDERDQTLNQ---LLTEMDGFD--SDVKV 316 + + A++ +P II++ + + +R N E D T L GF + + Sbjct: 1609 NLILELAEKLSPCIIWMPNIHELNVNRSTQ-NVESDPTFLLGIFLKYFQTGFSKKNTNNI 1667 Query: 317 IVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHL----RKVPLEEDSEII 484 I++ +T+ PK +D AL P R R + + ++ R+K +++ L K + + Sbjct: 1668 IIIGSTHLPKKVDPALISPNRLDRLINIRTFNILQRQKKISILLYSKYSKYFYSKKKKSS 1727 Query: 485 CDLVANVTPGLVGADLANIVNEAALLA 565 + + T G DLA ++NE L++ Sbjct: 1728 LNEFGSRTIGYNARDLAGLINEILLIS 1754
>RFCL_AERPE (Q9YBS5) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 479 Score = 48.1 bits (113), Expect = 2e-05 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 5/76 (6%) Frame = +2 Query: 8 RGVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEF-----VEMFVGRGAARVRDLFKEA 172 R LL GPPG GKT L +A+A E + ++AS++ +E VG A+R R +FK Sbjct: 50 RAALLYGPPGVGKTSLVEAIASEFNLEMIELNASDYRRRSDIERIVG-AASRKRSMFKRG 108 Query: 173 KEAAPSIIFIDELDAV 220 +I +DE+D + Sbjct: 109 -----VVILLDEVDGI 119
>CLPX2_WOLSU (Q7M8U5) ATP-dependent Clp protease ATP-binding subunit clpX 2| Length = 397 Score = 47.8 bits (112), Expect = 2e-05 Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 6/88 (6%) Frame = +2 Query: 14 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEM-FVGRGAARVRDLFKEA-----K 175 +LL GP G+GKTLLAK +A IPF A+ E +VG + A + Sbjct: 106 ILLLGPSGSGKTLLAKTLARVLNIPFAMSDATALTEAGYVGEDVESILSRLLHAASFDIE 165 Query: 176 EAAPSIIFIDELDAVGGSRGRSFNDERD 259 +A I++IDE+D + +G S RD Sbjct: 166 KAQKGIVYIDEIDKI-AKKGESVQSGRD 192 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,827,154 Number of Sequences: 219361 Number of extensions: 1780838 Number of successful extensions: 10412 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 9250 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9933 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
